View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2518_low_5 (Length: 347)
Name: NF2518_low_5
Description: NF2518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2518_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 32908385 - 32908729
Alignment:
| Q |
1 |
tttttaatgcagtggtgtgaaagtgaaggacgaaacaagttgaagataggaggtggattgtaccagggagctagatgtgaagttagtctgaaagggatgc |
100 |
Q |
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| T |
32908385 |
tttttaatgcagtggtgtgaaagtgaaggacgaaacaagttgaagataggaggtggattgtaccagggagctagatgtgaagttagtctgaaagggatgc |
32908484 |
T |
|
| Q |
101 |
tgggaggtttacttgggagacaagctagcatggagaatttgcttaatgtactcttaatatcttgttagaattcagattccataaacaaagtaatttactc |
200 |
Q |
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| T |
32908485 |
tgggaggtttacttgggagacaagccagcatggagaatttgcttaatgtactcttaatatcttgttagagttcagattccataaacaaagtaatttactc |
32908584 |
T |
|
| Q |
201 |
taattacatcttaaaacaaagtagcttattttgatttgtgttactccttcagtaacacgacatgactaaaactttcttgatgttgaagttatgtttctgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32908585 |
taattacatcttaaaacaaagtagcttattttgatttgtgttactccttcagtaacacgacatgactaaaactttcttgatgttgaagttatgtttctgg |
32908684 |
T |
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| Q |
301 |
tatggtgcttttttctgtgctatttgttgttttatatttttggac |
345 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32908685 |
tatggtgcttttttctgtgctatttgttgttttatatgtttggac |
32908729 |
T |
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