View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2519_high_129 (Length: 262)

Name: NF2519_high_129
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2519_high_129
NF2519_high_129
[»] chr3 (17 HSPs)
chr3 (16-81)||(10828695-10828760)
chr3 (16-69)||(15048035-15048088)
chr3 (194-239)||(10828613-10828658)
chr3 (16-69)||(30311355-30311408)
chr3 (16-69)||(46518677-46518730)
chr3 (16-69)||(53412994-53413047)
chr3 (23-69)||(28703378-28703424)
chr3 (24-69)||(10969891-10969936)
chr3 (16-65)||(37788443-37788492)
chr3 (16-63)||(34062528-34062575)
chr3 (15-62)||(34622522-34622569)
chr3 (16-62)||(8796074-8796120)
chr3 (23-57)||(39253753-39253787)
chr3 (16-81)||(19154680-19154745)
chr3 (16-61)||(27093343-27093388)
chr3 (16-69)||(27259210-27259263)
chr3 (16-60)||(8170721-8170765)
[»] chr2 (16 HSPs)
chr2 (16-69)||(13803544-13803597)
chr2 (143-196)||(42358110-42358163)
chr2 (12-61)||(4226107-4226156)
chr2 (16-69)||(30410523-30410576)
chr2 (16-69)||(34041562-34041615)
chr2 (16-69)||(40416364-40416417)
chr2 (16-69)||(45026792-45026845)
chr2 (24-80)||(19244166-19244222)
chr2 (25-69)||(42922473-42922517)
chr2 (22-69)||(2750600-2750647)
chr2 (22-69)||(4060188-4060235)
chr2 (16-66)||(14500326-14500376)
chr2 (16-69)||(21303968-21304021)
chr2 (26-58)||(9318060-9318092)
chr2 (23-59)||(9776360-9776396)
chr2 (23-59)||(33605791-33605827)
[»] chr4 (17 HSPs)
chr4 (16-81)||(37109313-37109378)
chr4 (153-196)||(25371670-25371713)
chr4 (16-69)||(2185006-2185059)
chr4 (16-69)||(4249226-4249279)
chr4 (16-69)||(16581742-16581795)
chr4 (155-196)||(33870944-33870985)
chr4 (16-69)||(38869817-38869870)
chr4 (25-69)||(27372631-27372675)
chr4 (22-69)||(15180793-15180840)
chr4 (16-66)||(23378005-23378055)
chr4 (16-69)||(7292772-7292825)
chr4 (16-69)||(10048029-10048082)
chr4 (17-69)||(6666400-6666452)
chr4 (17-69)||(20770961-20771013)
chr4 (16-65)||(7539639-7539688)
chr4 (16-69)||(33632110-33632163)
chr4 (16-60)||(51622534-51622578)
[»] chr5 (16 HSPs)
chr5 (16-78)||(14285210-14285271)
chr5 (155-196)||(2639533-2639574)
chr5 (16-69)||(18595975-18596028)
chr5 (17-81)||(2269186-2269250)
chr5 (16-68)||(34984855-34984907)
chr5 (15-65)||(7918447-7918497)
chr5 (23-69)||(26078025-26078071)
chr5 (16-65)||(25627106-25627155)
chr5 (16-69)||(25979219-25979272)
chr5 (16-69)||(37258340-37258393)
chr5 (16-59)||(16773856-16773899)
chr5 (150-196)||(9749207-9749253)
chr5 (16-69)||(18974009-18974062)
chr5 (16-69)||(30735041-30735094)
chr5 (22-58)||(14656629-14656665)
chr5 (16-60)||(43442245-43442289)
[»] chr7 (22 HSPs)
chr7 (16-69)||(43215233-43215286)
chr7 (155-196)||(22365594-22365635)
chr7 (16-69)||(26459384-26459437)
chr7 (16-69)||(39631893-39631946)
chr7 (14-62)||(13106763-13106811)
chr7 (22-69)||(17113850-17113897)
chr7 (12-62)||(29538543-29538593)
chr7 (16-69)||(21570006-21570059)
chr7 (155-196)||(22361908-22361949)
chr7 (12-69)||(27255378-27255435)
chr7 (16-69)||(29785275-29785328)
chr7 (16-69)||(33869419-33869472)
chr7 (16-67)||(7744088-7744139)
chr7 (16-59)||(21558177-21558220)
chr7 (17-68)||(25655203-25655254)
chr7 (16-59)||(31835241-31835284)
chr7 (22-69)||(33222425-33222472)
chr7 (22-65)||(37162328-37162371)
chr7 (16-62)||(11700214-11700259)
chr7 (16-62)||(22760912-22760958)
chr7 (16-81)||(9183153-9183218)
chr7 (22-59)||(30579390-30579427)
[»] chr1 (17 HSPs)
chr1 (16-69)||(2799911-2799964)
chr1 (16-69)||(36371519-36371572)
chr1 (14-81)||(1247160-1247227)
chr1 (154-196)||(43046347-43046389)
chr1 (16-69)||(8177156-8177209)
chr1 (16-69)||(8904463-8904516)
chr1 (16-81)||(9165157-9165222)
chr1 (16-69)||(33700747-33700800)
chr1 (23-69)||(40810523-40810569)
chr1 (22-69)||(29753704-29753751)
chr1 (16-62)||(3265973-3266019)
chr1 (23-69)||(32524387-32524433)
chr1 (16-65)||(4566597-4566646)
chr1 (16-65)||(15786298-15786347)
chr1 (17-69)||(11063606-11063658)
chr1 (31-59)||(29056442-29056470)
chr1 (16-60)||(51814543-51814587)
[»] scaffold0063 (1 HSPs)
scaffold0063 (16-68)||(35364-35416)
[»] chr6 (5 HSPs)
chr6 (23-69)||(11306148-11306194)
chr6 (16-69)||(23910087-23910138)
chr6 (16-69)||(12188277-12188330)
chr6 (16-69)||(13330136-13330189)
chr6 (16-60)||(28363986-28364030)
[»] chr8 (8 HSPs)
chr8 (16-65)||(33017263-33017312)
chr8 (155-196)||(33306176-33306217)
chr8 (22-69)||(18540353-18540400)
chr8 (154-196)||(1895577-1895619)
chr8 (155-196)||(41139236-41139277)
chr8 (16-65)||(12988477-12988526)
chr8 (16-69)||(31408096-31408149)
chr8 (16-60)||(13129717-13129761)
[»] scaffold0238 (1 HSPs)
scaffold0238 (16-61)||(2693-2738)
[»] scaffold0126 (1 HSPs)
scaffold0126 (16-61)||(25329-25374)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-69)||(81538-81591)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-64)||(94950-94998)
[»] scaffold0211 (1 HSPs)
scaffold0211 (31-62)||(24117-24148)
[»] scaffold0199 (1 HSPs)
scaffold0199 (26-59)||(8520-8553)
[»] scaffold0180 (1 HSPs)
scaffold0180 (16-65)||(19940-19989)
[»] scaffold0194 (1 HSPs)
scaffold0194 (16-60)||(13029-13073)


Alignment Details
Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 10828760 - 10828695
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  10828760 ctcctacttaaggtctcaggttcgattatctatgatgccaatttgagggggttaggttagtttctt 10828695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 15048088 - 15048035
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15048088 ctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggtta 15048035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 10828658 - 10828613
Alignment:
Q  194 aaggtattaatttataaaattgtgttttaagcatgacgattggaga 239  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  10828658 aaggtattaatttaaaaaactgtgttttaagcatgacgattggaga 10828613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 30311355 - 30311408
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| ||| || |||||||||||||||||||    
T  30311355 ctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggtta 30311408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 46518677 - 46518730
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  46518677 ctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggtta 46518730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 53412994 - 53413047
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  53412994 ctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggtta 53413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 28703424 - 28703378
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||    
T  28703424 tcaaggtctcaggttcgattctctctggtgccaatttgaggaggtta 28703378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 10969936 - 10969891
Alignment:
Q  24 caaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  10969936 caaggtctcaggttcgattctctctggtgccaatttaagggggtta 10969891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 37788492 - 37788443
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  37788492 ctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggg 37788443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 34062575 - 34062528
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagg 63  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||    
T  34062575 ctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagg 34062528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 34622569 - 34622522
Alignment:
Q  15 actcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    |||||| ||||||||||||||||||||| |||||| || |||||||||    
T  34622569 actcctcctcaaggtctcaggttcgattttctctggtgtcaatttgag 34622522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 8796120 - 8796074
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||| |||||||||||| |||||||| |||||||||| ||||||||    
T  8796120 ctcctcctcaaggtctcaagttcgattctctctgatgctaatttgag 8796074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 39253753 - 39253787
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaat 57  Q
    |||||||||||||||||||| ||||||||||||||    
T  39253753 tcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 19154680 - 19154745
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    ||||| || |||||||||||||||||| ||| ||||| ||||||| | ||||||  ||||||||||    
T  19154680 ctcctcctaaaggtctcaggttcgattctctttgatgtcaatttgggtgggttagtttagtttctt 19154745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 27093388 - 27093343
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttga 61  Q
    ||||| |||||||||||||||| |||| |||||| |||||||||||    
T  27093388 ctcctcctcaaggtctcaggtttgattctctctggtgccaatttga 27093343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 27259210 - 27259263
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||| |||| ||||||| |||| ||||||||| ||||||||||||||||    
T  27259210 ctcctcctcgaggtttcaggtttgattctctctgatgtcaatttgagggggtta 27259263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 8170721 - 8170765
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    |||||||||||||||||||||||||||  ||||| || |||||||    
T  8170721 ctcctactcaaggtctcaggttcgatttcctctggtgtcaatttg 8170765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 13803544 - 13803597
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13803544 ctcctcctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 13803597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 42358110 - 42358163
Alignment:
Q  143 aaaaatgaaatttgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42358110 aaaaaagaaatttgccctcacgcaggatcgaactacggacctccagtttacaag 42358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 4226107 - 4226156
Alignment:
Q  12 tatactcctactcaaggtctcaggttcgattatctctgatgccaatttga 61  Q
    ||||||||| |||||||| ||||||||||||||||||||||  |||||||    
T  4226107 tatactcctcctcaaggtttcaggttcgattatctctgatgttaatttga 4226156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30410576 - 30410523
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||| |||| |||||||| |||||| |||||||||||||||||||    
T  30410576 ctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggtta 30410523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 34041615 - 34041562
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  34041615 ctcctcctcaaggtctcaggtttgattccctctggtgccaatttgagggggtta 34041562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 40416417 - 40416364
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| || |||||||||||||||||| |||||| ||||||||||| |||||||    
T  40416417 ctcctccttaaggtctcaggttcgattctctctggtgccaatttgaaggggtta 40416364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 45026792 - 45026845
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||| ||| |||| |||||| |||||||||||||||||||    
T  45026792 ctcctcctcaaggtctcatgtttgattctctctggtgccaatttgagggggtta 45026845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 19244166 - 19244222
Alignment:
Q  24 caaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttct 80  Q
    ||||||||||||||||||| |||||| |||||||||||| ||| ||  |||||||||    
T  19244166 caaggtctcaggttcgattctctctggtgccaatttgagtgggctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 42922473 - 42922517
Alignment:
Q  25 aaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||    
T  42922473 aaggtctcaggttcgattctctctggtgccaatttgatggggtta 42922517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 2750647 - 2750600
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||    
T  2750647 ctcaaggtctcatgttcgattctctctagtgccaatttgagggggtta 2750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 4060235 - 4060188
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||| |||||||||||||| |||||| || ||||||||||||||||    
T  4060235 ctcaagatctcaggttcgattctctctggtgtcaatttgagggggtta 4060188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 14500326 - 14500376
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgaggggg 66  Q
    ||||| ||| ||||||||| ||||||| |||||| ||||||||||||||||    
T  14500326 ctcctcctctaggtctcagattcgattctctctggtgccaatttgaggggg 14500376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21304021 - 21303968
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| || ||||| |||||||||||| |||||| || ||||||||||||||||    
T  21304021 ctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggtta 21303968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 9318092 - 9318060
Alignment:
Q  26 aggtctcaggttcgattatctctgatgccaatt 58  Q
    ||||||||||||||||| |||||||||||||||    
T  9318092 aggtctcaggttcgattctctctgatgccaatt 9318060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 9776360 - 9776396
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9776360 tcaagatctcaggttcgattatctctgatgctaattt 9776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 33605827 - 33605791
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    |||||||||||  ||||||||||||||||||||||||    
T  33605827 tcaaggtctcatattcgattatctctgatgccaattt 33605791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 37109378 - 37109313
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||    
T  37109378 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagtttctt 37109313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 25371713 - 25371670
Alignment:
Q  153 tttgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  25371713 tttgccctcacgcaggatcgaactacggaccttcagtttacaag 25371670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 2185059 - 2185006
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  2185059 ctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggtta 2185006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 4249226 - 4249279
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||||||| |||| |||||| |||||||||||||||||||    
T  4249226 ctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggtta 4249279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 16581742 - 16581795
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  16581742 ctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggtta 16581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 33870985 - 33870944
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  33870985 tgccctcacgcaggatcgaactacggaccttcagtttacaag 33870944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 38869817 - 38869870
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||||||||||||  ||||| |||||||||||||||||||    
T  38869817 ctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggtta 38869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 27372675 - 27372631
Alignment:
Q  25 aaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  27372675 aaggtcttaggttcgattatctctgatgccaatttgaaggggtta 27372631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 15180793 - 15180840
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  15180793 ctcaaggtcttaggttcgattctctctggtgccaatttgagggggtta 15180840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 23378005 - 23378055
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgaggggg 66  Q
    ||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  23378005 ctcctcctcaaggtctcaggttcgattctctctagtgccaatttgaggggg 23378055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7292825 - 7292772
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||| ||||||||||||||| |||||  |||||||||||||||||||    
T  7292825 ctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggtta 7292772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 10048029 - 10048082
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||| |||||||||||||||| |||||||||| ||||||| |||||||    
T  10048029 ctccttctcatggtctcaggttcgattctctctgatgctaatttgaaggggtta 10048082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 6666452 - 6666400
Alignment:
Q  17 tcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||| |||||| |||||||||||||| |||||| |||| ||||||||||||||    
T  6666452 tcctcctcaagatctcaggttcgattctctctggtgcccatttgagggggtta 6666400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 20770961 - 20771013
Alignment:
Q  17 tcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||| |||||||||||| |||||||| |||| | |||||||||||||||||||    
T  20770961 tccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggtta 20771013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 7539639 - 7539688
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| |||||  || ||||||||||||    
T  7539639 ctccttctcaaggtctcaggttcgattctctcttctgtcaatttgagggg 7539688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33632163 - 33632110
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||| |||| |||||| |||||| || ||||||||||||||||    
T  33632163 ctcctcctcaaggtcccaggatcgattctctctggtgtcaatttgagggggtta 33632110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 51622534 - 51622578
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  51622534 ctcctcctcaaggtctcaggttcgactctctctggtgccaatttg 51622578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 14285210 - 14285271
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagttt 78  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  14285210 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggtta-gttagttt 14285271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 2639574 - 2639533
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2639574 tgccctcacgcaggatcgaactacggacctccagtttacaag 2639533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 18596028 - 18595975
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  18596028 ctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggtta 18595975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 2269250 - 2269186
Alignment:
Q  17 tcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    |||| ||||||||||||  ||||||||||||||||  ||||||||||||||||| |||| |||||    
T  2269250 tcctcctcaaggtctcaaattcgattatctctgataacaatttgagggggttattttagcttctt 2269186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34984855 - 34984907
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtt 68  Q
    ||||| |||||||||| |||||||||| |||||| ||||||||||||||||||    
T  34984855 ctcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggggtt 34984907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 7918497 - 7918447
Alignment:
Q  15 actcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    |||||| |||||||||| |||||||||| |||||| |||||||||||||||    
T  7918497 actcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggg 7918447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 26078071 - 26078025
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||    
T  26078071 tcaaggtctcaggttcgattctctctagtgccaatttgagggggtta 26078025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 25627106 - 25627155
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| |||||| || ||||||||||||    
T  25627106 ctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgagggg 25627155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 25979219 - 25979272
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  25979219 ctcctcctcaaggtctcaggttcgattctctcttatgtcaatttgatggggtta 25979272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 37258393 - 37258340
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| |||||||||||| |||||| || ||||||||||||||||    
T  37258393 ctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggtta 37258340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 16773856 - 16773899
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||    
T  16773856 ctcctcctcgaggtctcaggttcgattctctctgatgccaattt 16773899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 9749207 - 9749253
Alignment:
Q  150 aaatttgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||| ||||| || ||||||||||||||| |||||||||||||||||    
T  9749207 aaatctgcccccatgcaggatcgaactacagacctccagtttacaag 9749253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 18974009 - 18974062
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| |||||||||||| || ||| |||||||||||| ||||||    
T  18974009 ctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtgggtta 18974062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30735094 - 30735041
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||  ||||| ||||||||| |||||||| ||||||||||||||||    
T  30735094 ctcctcctcaaaatctcaagttcgattacctctgatgtcaatttgagggggtta 30735041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14656665 - 14656629
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatt 58  Q
    ||||||||||||||||||||| | |||||||||||||    
T  14656665 ctcaaggtctcaggttcgattgtttctgatgccaatt 14656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 43442245 - 43442289
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| ||||||||||||||||||||| |||||| || |||||||    
T  43442245 ctcctcctcaaggtctcaggttcgattctctctgttgtcaatttg 43442289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 43215233 - 43215286
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43215233 ctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggtta 43215286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 22365594 - 22365635
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  22365594 tgccctcacgcaggatcgaactacggaccttcagtttacaag 22365635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26459437 - 26459384
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  26459437 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggtta 26459384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 39631893 - 39631946
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  39631893 ctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggtta 39631946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 13106811 - 13106763
Alignment:
Q  14 tactcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  13106811 tactcctcctcaaggtctcaggttcgattctctctgatgctaatttgag 13106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 17113850 - 17113897
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||    
T  17113850 ctcaaggtctcaagttcgattctctctgatgctaatttgagggggtta 17113897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 29538593 - 29538543
Alignment:
Q  12 tatactcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||||||| |||||||||||| |||||||| || ||||||||||||||||    
T  29538593 tatactccttctcaaggtctcaagttcgattctccctgatgccaatttgag 29538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21570059 - 21570006
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||| |||||||| |||||| || ||||||||||||||||    
T  21570059 ctcctcctcaaggtctcaagttcgattttctctggtgtcaatttgagggggtta 21570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 22361908 - 22361949
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  22361908 tgccctcacgcaggatcgaactacagaccttcagtttacaag 22361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 27255378 - 27255435
Alignment:
Q  12 tatactcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||||| ||||| |||||||||| |||| ||||||||| ||| ||||||||||||    
T  27255378 tatactccttctcaaagtctcaggtttgattttctctgatgtcaaattgagggggtta 27255435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 29785328 - 29785275
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||| |||||||| | |||| |||||||||||||||||||    
T  29785328 ctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggtta 29785275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33869472 - 33869419
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||| ||||||||| |||||| || ||||||||||||||||    
T  33869472 ctccttctcaaggtctctggttcgattctctctggtgtcaatttgagggggtta 33869419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 7744139 - 7744088
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggt 67  Q
    ||||| |||||||||||||||| |||| |||||| ||| |||||||||||||    
T  7744139 ctcctcctcaaggtctcaggtttgattctctctggtgcaaatttgagggggt 7744088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21558177 - 21558220
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||    
T  21558177 ctcctcctcaaggtctcaggttcgattctctctggtgccaattt 21558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 25655254 - 25655203
Alignment:
Q  17 tcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtt 68  Q
    |||| |||||||| |||||||||||| |||||| ||||||||||| ||||||    
T  25655254 tcctcctcaaggtttcaggttcgattctctctggtgccaatttgaaggggtt 25655203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31835241 - 31835284
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||    
T  31835241 ctcctcctcaaggtctcaggttcgattatccctggtgccaattt 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 33222425 - 33222472
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||||||||||||||||| |||||| || ||||||||| ||||||    
T  33222425 ctcaaggtctcaggttcgattctctctggtgtcaatttgagagggtta 33222472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 37162371 - 37162328
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    |||||||||||| |||||||| |||||| |||||||||||||||    
T  37162371 ctcaaggtctcaagttcgattctctctggtgccaatttgagggg 37162328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 11700214 - 11700259
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  11700214 ctcctcctcaaggtctcaggttcgattctctctg-tgccaatttgag 11700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 22760912 - 22760958
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||| ||||||||||||||||||||| || | ||||||||||||||    
T  22760912 ctcctcctcaaggtctcaggttcgattctccccgatgccaatttgag 22760958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 9183218 - 9183153
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||| | ||| ||  ||||||||||    
T  9183218 ctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttctt 9183153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 30579390 - 30579427
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaattt 59  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  30579390 ctcaaggtctcaggttcgattttctctggtgccaattt 30579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 2799911 - 2799964
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  2799911 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggtta 2799964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 36371519 - 36371572
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36371519 ctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggtta 36371572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 1247160 - 1247227
Alignment:
Q  14 tactcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    ||||||| ||||||||||||||||||||| |||||| | ||||||||| |||||||| |||| |||||    
T  1247160 tactcctcctcaaggtctcaggttcgattctctctggtaccaatttgaaggggttattttagcttctt 1247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 43046347 - 43046389
Alignment:
Q  154 ttgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  43046347 ttgccctcacgcaggatcgaactacggaccttcagtttacaag 43046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 8177209 - 8177156
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| |||||||||||| |||||| |||||||||||||||||||    
T  8177209 ctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggtta 8177156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 8904463 - 8904516
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||| |||||||| |||||| |||||||||||||||||||    
T  8904463 ctcctcctcaaggtctcaagttcgattctctctggtgccaatttgagggggtta 8904516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 9165222 - 9165157
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggttatgttagtttctt 81  Q
    ||||| ||||| ||||||||||| ||| |||||| |||||||||||||||||||  ||||||||||    
T  9165222 ctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggggttactttagtttctt 9165157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33700800 - 33700747
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  33700800 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtta 33700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 40810523 - 40810569
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||    
T  40810523 tcaaggtctcaggttcgattctctctggtgccaatttgagagggtta 40810569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 29753704 - 29753751
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||||||||||||||||| |||||| ||||||||| || ||||||    
T  29753704 ctcaaggtctcaggttcgattctctctggtgccaatttaagagggtta 29753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 3265973 - 3266019
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgag 62  Q
    ||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  3265973 ctcctcctcaaggtctcaggttcgattctctctggttccaatttgag 3266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 32524387 - 32524433
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||| |||||||| |||||| |||||||||||||||||||    
T  32524387 tcaagatctcaagttcgattctctctggtgccaatttgagggggtta 32524433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 4566597 - 4566646
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| |||| |||||||||||||||| ||||||||| |||||| |||||    
T  4566597 ctcctcctcagggtctcaggttcgattctctctgatgtcaatttaagggg 4566646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 15786347 - 15786298
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||    
T  15786347 ctcctcctcaaggtctcaggttcgattctctttggtgtcaatttgagggg 15786298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 11063606 - 11063658
Alignment:
Q  17 tcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||| |||||||||| |||||||||| |||||  ||||||||||| |||||||    
T  11063606 tcctcctcaaggtcttaggttcgattctctctagtgccaatttgaaggggtta 11063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 29056442 - 29056470
Alignment:
Q  31 tcaggttcgattatctctgatgccaattt 59  Q
    |||||||||||||||||||||||||||||    
T  29056442 tcaggttcgattatctctgatgccaattt 29056470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 51814543 - 51814587
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| ||||||||||||||||||||| |||| | ||||||||||    
T  51814543 ctcctcctcaaggtctcaggttcgattctctccggtgccaatttg 51814587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 35416 - 35364
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtt 68  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  35416 ctcctcctcaaggtcttaagttcgattatctctgatgccaatttgagggggtt 35364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 11306194 - 11306148
Alignment:
Q  23 tcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  11306194 tcaaggtctcaggttcgattctctctggtgccaatttgagggggtta 11306148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 23910138 - 23910087
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  23910138 ctcctcctcaaggtctcaggttcga--atctctggtgccaatttgagggggtta 23910087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12188330 - 12188277
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| ||| |||||||| |||||  |||||||||||||||||||    
T  12188330 ctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggtta 12188277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 13330136 - 13330189
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||| ||||||| |||||  |||||||||||| ||||||    
T  13330136 ctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagagggtta 13330189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 28363986 - 28364030
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| ||||||||||||| |||||||||||||| || |||||||    
T  28363986 ctcctcctcaaggtctcagattcgattatctctggtgtcaatttg 28364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 33017263 - 33017312
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  33017263 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggg 33017312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 33306217 - 33306176
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  33306217 tgccctcacgcaggatcgaactacggaccttcagtttacaag 33306176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 18540353 - 18540400
Alignment:
Q  22 ctcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  18540353 ctcaaggtctcaggttcgattctctctggtgccaatttgagagggtta 18540400  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 1895619 - 1895577
Alignment:
Q  154 ttgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  1895619 ttgccctcacgcaggatcgaactgcggaccttcagtttacaag 1895577  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 41139236 - 41139277
Alignment:
Q  155 tgccctcacgcaggatcgaactacggacctccagtttacaag 196  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  41139236 tgccctcacgcaggatcgaactatggaccttcagtttacaag 41139277  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 12988477 - 12988526
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| |||||||| |||||||||||  |||||| |||||||||||||||    
T  12988477 ctcctcctcaaggtttcaggttcgatcctctctggtgccaatttgagggg 12988526  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 31408149 - 31408096
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| |||||||| |||||||||||| ||||| ||| |||||| |||||||||    
T  31408149 ctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggtta 31408096  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 13129717 - 13129761
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||    
T  13129717 ctcctcctcaaggtttcaggttcgattctctctggtgccaatttg 13129761  T

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Target: scaffold0238 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 2738 - 2693
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttga 61  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||    
T  2738 ctcctcctcaaggtctcaggttcgattctctctggtgccaatttga 2693  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 25374 - 25329
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttga 61  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||    
T  25374 ctccttctcaaggtctcaggttcgattatctctggtgtcaatttga 25329  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 81591 - 81538
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggggtta 69  Q
    ||||| ||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  81591 ctcctcctcaaggtctcagattcgattctccctgatgccaatttgagggagtta 81538  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 94998 - 94950
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgaggg 64  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||| ||||    
T  94998 ctcctcctcaaggtctcaggttcaattatctctggtgccaatttaaggg 94950  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 24117 - 24148
Alignment:
Q  31 tcaggttcgattatctctgatgccaatttgag 62  Q
    ||||||||||||||||||||||||||||||||    
T  24117 tcaggttcgattatctctgatgccaatttgag 24148  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 8553 - 8520
Alignment:
Q  26 aggtctcaggttcgattatctctgatgccaattt 59  Q
    |||||||||||||||||||||||| |||||||||    
T  8553 aggtctcaggttcgattatctctggtgccaattt 8520  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 19989 - 19940
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttgagggg 65  Q
    ||||| ||||||||||||||||||||| |||||| ||  |||||||||||    
T  19989 ctcctcctcaaggtctcaggttcgattctctctggtgttaatttgagggg 19940  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 13073 - 13029
Alignment:
Q  16 ctcctactcaaggtctcaggttcgattatctctgatgccaatttg 60  Q
    ||||| ||||||||||||||||||||| |||| |||| |||||||    
T  13073 ctcctcctcaaggtctcaggttcgattctctccgatgtcaatttg 13029  T

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