View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_high_170 (Length: 237)
Name: NF2519_high_170
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_high_170 |
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Alignment Details
Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37288247 - 37288026
Alignment:
| Q |
1 |
atctttatgtgtctttagtcaattattattacatgattgtcacacannnnnnnnnnnnnnnnnnnnattgatcaaaagaggatgaaatgatgatattatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37288247 |
atctttatgtgtctttagtcaattattattacatgattgtcacacatttttatttttatttgttttattgatcaaaagaggatgaaatgatgatattatt |
37288148 |
T |
|
| Q |
101 |
tttggtatgtgatggtgacggtaaagtgtttttaatttgtaaagattttaatgtctacatgtttaaaagtggtgtgatatactcttttcaaacttgtgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37288147 |
tttggtatgtgatggtgacggtaaagtgtttttaatttgtaaagattttaatgtccacatgtttaaaagtggtgtgatatactcttttcaaacttgtgaa |
37288048 |
T |
|
| Q |
201 |
tttatgtcttatagtatttact |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
37288047 |
tttatgtcttatagtatttact |
37288026 |
T |
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