View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_high_185 (Length: 215)
Name: NF2519_high_185
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_high_185 |
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Alignment Details
Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 37288569 - 37288752
Alignment:
| Q |
1 |
cttttgtcttcaatttggaatatctcaccttgattggttnnnnnnnnnnnnnggcttcatcataatttatttataagctcatatttaatacatgaaataa |
100 |
Q |
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| T |
37288569 |
cttttgtcttcactttggaatatctcaccttgattggtttatatat------ggcttcatcataatttatttataagctcatatttaatacatgaaataa |
37288662 |
T |
|
| Q |
101 |
agtctttgatcatgctcacggcttannnnnnnatatccaagtatgtcggtatctaagttttcaagtctaaaatttcttattctatgatatg |
191 |
Q |
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|||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37288663 |
agtctttgatcatgctcatggcttatttttttatatccaagtatgtc-gtatctaagttttcaagtctaaaatttcttattctatgatatg |
37288752 |
T |
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