View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_high_86 (Length: 323)
Name: NF2519_high_86
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_high_86 |
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Alignment Details
Target: chr3 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 32929775 - 32930079
Alignment:
| Q |
1 |
acagagtgaccgaaagagaaaaagtattaattgactatttctctgaccatattttggaaggtcgaatccatggaccaacctacaatgtactcacatatgg |
100 |
Q |
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| T |
32929775 |
acagagtgaccgaaagagaaaaagtattaattgactatttctctgaccatattttggaaggtcgaatccatggaccaacctacaatgtactcacatatgg |
32929874 |
T |
|
| Q |
101 |
ataaattaggaccacttgctgaattgaattaatcaaagctgctttgtttcgtactacctttgtagttattttaatttatgtatagtgaatgaaattaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32929875 |
ataaattaggaccacttgctgaattgaattaatcaaagctgctttgtttcgtactacctttgtagttattttaatttatgtatagtgaatgaaattaact |
32929974 |
T |
|
| Q |
201 |
aaagttcggtgaagtaccaaagaatattcactttcacgttatgaagcacttacaattgtacaaagcaagttatttattaattttgttacggttatataac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32929975 |
aaagttcggtgaagtaccaaagaatattcactttcacgttatgaagcacttacaattgtacaaagcaagttatttattaattttgttacggttatataac |
32930074 |
T |
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| Q |
301 |
gtgtg |
305 |
Q |
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||||| |
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| T |
32930075 |
gtgtg |
32930079 |
T |
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