View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2519_low_106 (Length: 300)

Name: NF2519_low_106
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2519_low_106
NF2519_low_106
[»] chr2 (45 HSPs)
chr2 (1-141)||(2410059-2410199)
chr2 (46-141)||(11513859-11513954)
chr2 (48-137)||(9395093-9395182)
chr2 (47-137)||(33942112-33942202)
chr2 (105-146)||(40837444-40837485)
chr2 (37-124)||(10143124-10143211)
chr2 (46-132)||(15780040-15780124)
chr2 (46-137)||(22681203-22681294)
chr2 (49-111)||(5043604-5043666)
chr2 (47-137)||(13630299-13630389)
chr2 (48-130)||(25790089-25790171)
chr2 (48-137)||(27288596-27288683)
chr2 (46-124)||(28803537-28803615)
chr2 (47-120)||(3102655-3102728)
chr2 (56-137)||(3235402-3235482)
chr2 (48-141)||(18066091-18066184)
chr2 (37-137)||(18962055-18962156)
chr2 (37-141)||(1742046-1742150)
chr2 (37-141)||(5133724-5133828)
chr2 (61-137)||(10285836-10285912)
chr2 (61-137)||(40158694-40158770)
chr2 (57-137)||(43205281-43205361)
chr2 (50-137)||(29316793-29316880)
chr2 (41-96)||(37766754-37766809)
chr2 (74-141)||(39983331-39983398)
chr2 (85-140)||(43985018-43985073)
chr2 (46-96)||(14666509-14666559)
chr2 (49-95)||(31740019-31740065)
chr2 (47-137)||(32694174-32694264)
chr2 (37-102)||(43299455-43299521)
chr2 (46-96)||(43529910-43529960)
chr2 (47-137)||(44438857-44438947)
chr2 (68-129)||(757438-757499)
chr2 (48-101)||(4550740-4550793)
chr2 (37-102)||(17952754-17952819)
chr2 (43-88)||(29429824-29429869)
chr2 (50-136)||(29503100-29503188)
chr2 (49-137)||(35485881-35485969)
chr2 (88-137)||(43065468-43065517)
chr2 (48-129)||(43141834-43141915)
chr2 (79-132)||(44238057-44238110)
chr2 (37-137)||(6227703-6227803)
chr2 (46-90)||(33256701-33256745)
chr2 (48-140)||(36863640-36863732)
chr2 (61-117)||(37276722-37276778)
[»] chr4 (31 HSPs)
chr4 (35-136)||(53943557-53943657)
chr4 (46-111)||(927437-927502)
chr4 (50-137)||(7694028-7694115)
chr4 (37-137)||(24929445-24929545)
chr4 (37-137)||(49219091-49219191)
chr4 (37-137)||(54325055-54325155)
chr4 (35-102)||(55870394-55870461)
chr4 (56-137)||(18628561-18628642)
chr4 (56-137)||(51197500-51197580)
chr4 (46-137)||(30207589-30207679)
chr4 (59-137)||(21157742-21157820)
chr4 (56-137)||(20936247-20936328)
chr4 (72-137)||(35405934-35405999)
chr4 (67-140)||(36722684-36722757)
chr4 (50-102)||(13949897-13949949)
chr4 (38-141)||(6466060-6466163)
chr4 (48-134)||(8422860-8422944)
chr4 (46-137)||(11802495-11802586)
chr4 (37-95)||(4071834-4071892)
chr4 (37-122)||(27623587-27623675)
chr4 (48-130)||(30581702-30581784)
chr4 (47-137)||(35064817-35064907)
chr4 (46-132)||(52735083-52735169)
chr4 (56-137)||(29263341-29263422)
chr4 (48-137)||(33534187-33534276)
chr4 (37-102)||(49085941-49086006)
chr4 (37-137)||(10192236-10192335)
chr4 (48-96)||(25434519-25434567)
chr4 (64-132)||(42866047-42866115)
chr4 (37-137)||(45128328-45128428)
chr4 (37-137)||(51630063-51630163)
[»] chr6 (20 HSPs)
chr6 (37-137)||(2117355-2117455)
chr6 (56-141)||(8420211-8420296)
chr6 (48-137)||(32386581-32386670)
chr6 (69-137)||(1275133-1275201)
chr6 (42-134)||(1401067-1401158)
chr6 (37-137)||(2027424-2027524)
chr6 (37-137)||(33787763-33787863)
chr6 (46-137)||(281866-281957)
chr6 (46-137)||(3155137-3155227)
chr6 (37-139)||(4006666-4006768)
chr6 (37-133)||(24836224-24836317)
chr6 (47-141)||(25100005-25100099)
chr6 (98-137)||(1408285-1408324)
chr6 (37-136)||(5328926-5329024)
chr6 (37-96)||(6310283-6310342)
chr6 (42-137)||(28088240-28088335)
chr6 (47-137)||(1497943-1498033)
chr6 (47-137)||(20671884-20671973)
chr6 (46-131)||(3181093-3181177)
chr6 (37-102)||(10452413-10452478)
[»] chr3 (42 HSPs)
chr3 (46-137)||(27792833-27792924)
chr3 (37-137)||(24887301-24887401)
chr3 (74-142)||(14548734-14548802)
chr3 (37-137)||(20192624-20192724)
chr3 (50-137)||(23785220-23785307)
chr3 (48-137)||(45432957-45433046)
chr3 (50-137)||(36101533-36101620)
chr3 (46-141)||(44374659-44374753)
chr3 (77-132)||(51510216-51510271)
chr3 (48-142)||(1816546-1816640)
chr3 (48-137)||(20502086-20502176)
chr3 (56-137)||(21367638-21367719)
chr3 (37-130)||(22232778-22232871)
chr3 (50-135)||(23315591-23315676)
chr3 (51-96)||(28779322-28779367)
chr3 (46-139)||(33965504-33965600)
chr3 (57-134)||(48286831-48286908)
chr3 (85-137)||(237397-237449)
chr3 (49-136)||(1125785-1125873)
chr3 (50-137)||(2318609-2318697)
chr3 (50-137)||(36139843-36139930)
chr3 (77-137)||(43115048-43115108)
chr3 (61-121)||(43875624-43875684)
chr3 (74-134)||(47904084-47904144)
chr3 (50-137)||(27290919-27291006)
chr3 (78-137)||(44295522-44295581)
chr3 (37-136)||(54775080-54775178)
chr3 (51-137)||(25453877-25453963)
chr3 (46-96)||(40122812-40122861)
chr3 (37-87)||(49586984-49587034)
chr3 (43-132)||(8933745-8933834)
chr3 (46-139)||(13481256-13481349)
chr3 (49-137)||(2201092-2201180)
chr3 (48-96)||(12923384-12923432)
chr3 (61-137)||(16990179-16990255)
chr3 (56-96)||(19679387-19679427)
chr3 (46-137)||(21862193-21862285)
chr3 (37-101)||(22214735-22214799)
chr3 (56-136)||(26603164-26603244)
chr3 (46-94)||(31337462-31337510)
chr3 (37-137)||(36646400-36646500)
chr3 (46-102)||(37788821-37788877)
[»] chr1 (50 HSPs)
chr1 (42-137)||(45205025-45205120)
chr1 (47-137)||(37842373-37842463)
chr1 (48-137)||(30257646-30257735)
chr1 (37-137)||(30259504-30259605)
chr1 (57-141)||(15515513-15515597)
chr1 (58-137)||(8130409-8130488)
chr1 (46-137)||(34380406-34380497)
chr1 (46-141)||(44032013-44032108)
chr1 (62-136)||(4078168-4078242)
chr1 (46-108)||(33527194-33527256)
chr1 (37-139)||(42556647-42556749)
chr1 (56-137)||(7218092-7218173)
chr1 (37-94)||(15360846-15360903)
chr1 (65-137)||(12564892-12564964)
chr1 (49-137)||(25479545-25479633)
chr1 (41-137)||(30371104-30371200)
chr1 (46-137)||(31517758-31517849)
chr1 (46-137)||(39347985-39348076)
chr1 (47-137)||(44940305-44940393)
chr1 (46-132)||(27738203-27738289)
chr1 (35-136)||(6932980-6933081)
chr1 (37-137)||(3924576-3924676)
chr1 (50-139)||(35017539-35017630)
chr1 (37-137)||(39777615-39777715)
chr1 (47-131)||(46980153-46980237)
chr1 (85-137)||(49175619-49175671)
chr1 (37-96)||(5756745-5756804)
chr1 (37-96)||(6074426-6074485)
chr1 (78-137)||(7472304-7472363)
chr1 (43-102)||(10581130-10581189)
chr1 (58-137)||(33723400-33723479)
chr1 (78-137)||(35590910-35590969)
chr1 (46-141)||(52286639-52286734)
chr1 (47-137)||(4215334-4215424)
chr1 (56-137)||(6231834-6231916)
chr1 (56-130)||(17269221-17269295)
chr1 (56-102)||(25006087-25006133)
chr1 (48-137)||(3319950-3320039)
chr1 (56-137)||(5150908-5150989)
chr1 (43-96)||(5421979-5422032)
chr1 (78-139)||(7137014-7137075)
chr1 (37-102)||(7273992-7274057)
chr1 (48-137)||(12477305-12477394)
chr1 (56-137)||(27887136-27887217)
chr1 (47-108)||(37272633-37272694)
chr1 (37-102)||(49517022-49517087)
chr1 (37-137)||(4200181-4200281)
chr1 (105-137)||(5047166-5047198)
chr1 (37-137)||(12564517-12564616)
chr1 (46-102)||(28467360-28467416)
[»] chr7 (26 HSPs)
chr7 (46-137)||(44151498-44151589)
chr7 (47-141)||(39505919-39506012)
chr7 (37-102)||(1417216-1417281)
chr7 (48-137)||(31338471-31338560)
chr7 (39-96)||(45777230-45777287)
chr7 (46-102)||(9527143-9527199)
chr7 (46-129)||(17989049-17989132)
chr7 (50-129)||(29363483-29363562)
chr7 (46-129)||(30456476-30456559)
chr7 (46-137)||(38010675-38010766)
chr7 (35-137)||(21185039-21185140)
chr7 (47-137)||(44910566-44910656)
chr7 (56-101)||(18516303-18516348)
chr7 (47-96)||(45813239-45813288)
chr7 (46-102)||(5006562-5006618)
chr7 (61-129)||(27481320-27481388)
chr7 (61-129)||(36370645-36370713)
chr7 (37-128)||(1373567-1373658)
chr7 (46-137)||(3610758-3610849)
chr7 (46-137)||(28165052-28165143)
chr7 (59-137)||(24909638-24909716)
chr7 (59-137)||(34754828-34754905)
chr7 (60-137)||(3559010-3559087)
chr7 (60-128)||(1350269-1350337)
chr7 (85-137)||(24363619-24363671)
chr7 (78-138)||(44241852-44241912)
[»] chr5 (34 HSPs)
chr5 (37-140)||(42181107-42181210)
chr5 (48-137)||(37588378-37588467)
chr5 (37-137)||(14295458-14295558)
chr5 (74-129)||(29054897-29054952)
chr5 (47-137)||(36539708-36539798)
chr5 (48-137)||(37690654-37690744)
chr5 (56-137)||(17368647-17368728)
chr5 (48-137)||(37526217-37526306)
chr5 (46-138)||(32172614-32172706)
chr5 (56-136)||(41016150-41016230)
chr5 (30-137)||(28586784-28586891)
chr5 (47-137)||(26390808-26390897)
chr5 (60-137)||(9106796-9106873)
chr5 (48-137)||(10272449-10272538)
chr5 (56-137)||(17258901-17258982)
chr5 (37-137)||(18543215-18543315)
chr5 (37-102)||(39823174-39823239)
chr5 (37-137)||(18704054-18704153)
chr5 (50-137)||(19177444-19177532)
chr5 (50-102)||(32059642-32059694)
chr5 (66-137)||(11104899-11104970)
chr5 (46-129)||(15003540-15003623)
chr5 (37-92)||(35135725-35135780)
chr5 (50-92)||(583836-583878)
chr5 (58-137)||(19138735-19138816)
chr5 (56-138)||(31030147-31030229)
chr5 (78-139)||(2568651-2568712)
chr5 (84-137)||(15074767-15074820)
chr5 (56-136)||(41017698-41017776)
chr5 (49-102)||(41277403-41277456)
chr5 (49-141)||(3970694-3970786)
chr5 (57-137)||(8985633-8985713)
chr5 (105-141)||(31688059-31688095)
chr5 (37-137)||(42583101-42583201)
[»] chr8 (29 HSPs)
chr8 (46-140)||(30013179-30013273)
chr8 (56-137)||(26284813-26284894)
chr8 (42-137)||(11795049-11795144)
chr8 (50-140)||(6509318-6509408)
chr8 (36-137)||(41336663-41336764)
chr8 (62-137)||(7645955-7646030)
chr8 (46-137)||(31862454-31862545)
chr8 (84-137)||(7918791-7918844)
chr8 (56-133)||(10383856-10383933)
chr8 (56-137)||(29973052-29973133)
chr8 (38-131)||(34551073-34551166)
chr8 (57-134)||(37776725-37776802)
chr8 (56-137)||(39561559-39561640)
chr8 (49-137)||(12361156-12361244)
chr8 (46-102)||(34770853-34770909)
chr8 (60-137)||(43704394-43704473)
chr8 (61-128)||(10460579-10460646)
chr8 (46-137)||(11183506-11183597)
chr8 (46-140)||(35298492-35298587)
chr8 (46-137)||(41620309-41620400)
chr8 (51-137)||(42215324-42215410)
chr8 (56-137)||(6864477-6864558)
chr8 (84-141)||(27028830-27028887)
chr8 (56-137)||(28769357-28769438)
chr8 (37-102)||(38561678-38561743)
chr8 (113-141)||(7646234-7646262)
chr8 (85-137)||(9956832-9956884)
chr8 (37-89)||(34788493-34788545)
chr8 (105-137)||(39881770-39881802)
[»] scaffold0024 (1 HSPs)
scaffold0024 (37-137)||(27528-27628)
[»] scaffold0053 (1 HSPs)
scaffold0053 (49-116)||(20143-20210)
[»] scaffold0020 (1 HSPs)
scaffold0020 (47-137)||(159991-160080)


Alignment Details
Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2410199 - 2410059
Alignment:
Q  1 ataagtgcttaagtataagtctataagccatacaccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcat 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  2410199 ataagtgcttaagcataagtctataagccatacgccatttatatgacaaaagatgaaacaaagtcaaattgtcttcatataatctataagttgtttgcat 2410100  T
Q  101 aatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    | |||||| ||||||||||||||||||||||||||||||||    
T  2410099 attttatcctgtagagcttatggaaataagctgaaaatagc 2410059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 11513859 - 11513954
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||  ||||||| ||| ||| |||||||||||||||||||||    
T  11513859 acaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagc 11513954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 9395093 - 9395182
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||||  ||| ||| ||||||||||||||||| ||||| ||| | ||||  ||||||||||||| ||||||||||||||    
T  9395093 aaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaa 9395182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 33942112 - 33942202
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||||||||||| ||||| ||| ||||||||||||| |||||   |||||  |||||| ||| |||| |||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaa 33942202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 40837485 - 40837444
Alignment:
Q  105 tatcatgtagagcttatggaaataagctgaaaatagccatgg 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  40837485 tatcatgtagagcttatggaaataagctgaaaatagctatgg 40837444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 10143124 - 10143211
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatgga 124  Q
    |||| ||| ||||||||| |||| |||||||||||| || |||||| ||||||||| ||| |||||  ||||||| |||| |||||||    
T  10143124 atttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 15780040 - 15780124
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    ||||||||| |||||||   |||| || ||||||||||||||||||||||| |||||  |||| || ||||||||| ||||||||||    
T  15780040 acaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 15780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 22681294 - 22681203
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||| |||| |||| ||| ||||||||| ||||||| ||||| |||||| |||| |  ||| |||||||||||||||| ||||    
T  22681294 acaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaa 22681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 5043666 - 5043604
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg 111  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||||  |||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatg 5043604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 13630389 - 13630299
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| | ||||||||||||||| ||||||||||| ||||||||||| | |||| |||| |  |||| |||||  |||||| ||||||    
T  13630389 caaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatgacaataagttgaaaa 13630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 25790089 - 25790171
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 130  Q
    ||||||| || | |||||||||||| ||||||||| ||| || ||||||| ||||| |||| || |||||||||| |||||||    
T  25790089 aaaagataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaataag 25790171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 27288596 - 27288683
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||| ||||||||| |  |||||| |||| |  ||||| ||||| ||||||||||||| ||| ||||||||||||||||    
T  27288596 aaaagataaaataaaatcaaactgttt--atataagctatgatctgttttcataagttatcatgtagagtttacggaaataagctgaaaa 27288683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 28803615 - 28803537
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatgga 124  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| ||||||||| | |||  |||| || ||||||||||||    
T  28803615 acaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 3102655 - 3102728
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagctta 120  Q
    ||||| || ||||||||||||||| | || ||||||||||| || ||||| |||||||||||||| ||| ||||    
T  3102655 caaaatataaaataaagtcaaactatttttatataatctattagctgttttcataatttatcatggagaactta 3102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 3235482 - 3235402
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| ||||   |||| || | || ||||||||||||||||||||    
T  3235482 aaataaagtcaaactgt-ttcatataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaa 3235402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 18066091 - 18066184
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||| |||||||||||| ||| ||| ||||||||| ||||||| ||||| |||||  |||| || ||| |||| | ||||||| ||||||||||    
T  18066091 aaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagc 18066184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 18962156 - 18962055
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaat-aagctgaa 135  Q
    |||| ||| ||||||||| ||||||||| ||||||| ||||||||| ||||||  | ||| |||||  ||||||| ||||  ||||||||| ||||||||    
T  18962156 atttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagagactatggaaataaagctgaa 18962057  T
Q  136 aa 137  Q
    ||    
T  18962056 aa 18962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 1742150 - 1742046
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||||| || |||| |||||||||| | |  ||||||  |||||| ||||| |||||| ||||||| |||| ||||||||||||| ||||     
T  1742150 atttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaag 1742051  T
Q  137 atagc 141  Q
    |||||    
T  1742050 atagc 1742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 5133724 - 5133828
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||  ||||||| || ||||||  |||||| ||||| || || |||||    ||||||||||||||||||||||||    
T  5133724 atttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaa 5133823  T
Q  137 atagc 141  Q
     ||||    
T  5133824 gtagc 5133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 10285836 - 10285912
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||  ||||||||| |||||||| ||||||||||  || |||  ||| |||||||||||||| ||||||    
T  10285836 aagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaa 10285912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 40158694 - 40158770
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||| ||| ||||| | ||||||||||| ||||| ||||  || |||||||||| || |||||||||||    
T  40158694 aagtcaaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaa 40158770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 43205281 - 43205361
Alignment:
Q  57 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||||||| |||||||||  |||||  ||||| |||||  ||||| | |||||||||||||||||| ||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaa 43205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 29316880 - 29316793
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| |||||| || ||| ||| |||| |||||||||||| ||||| ||| |  |||| || ||| |||||||||||||||||||||    
T  29316880 aagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 37766754 - 37766809
Alignment:
Q  41 atatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||||||| || ||||||||||||| ||| ||| ||||| |||||||||||||    
T  37766754 atatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttgttt 37766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 39983331 - 39983398
Alignment:
Q  74 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||||| ||||||||||||| |||||  |||| || |||||| ||| |||||| |||||||||||    
T  39983331 ttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagc 39983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 43985073 - 43985018
Alignment:
Q  85 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    |||||||||||| |||||  |||| || |||||||||| |||||||||||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatag 43985018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 14666509 - 14666559
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||||| ||||||||||||||||  |||||||||  ||||||||||||    
T  14666509 acaaaagataaaataaagtcaaactgatttcatataagttataagttgttt 14666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 31740065 - 31740019
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtt 95  Q
    |||||| ||||||||||||||| | ||||||||| ||||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 32694174 - 32694264
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||| ||| ||| | || ||||||| ||||||||||||||||||  |||| |  | || || |||||||||||||||||    
T  32694174 caaaagataaaataaaatcagactatttttatataatttataagttgtttgcataagctatcctagatagattgtggaaataagctgaaaa 32694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 43299521 - 43299455
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatat-aatctataagttgtttgcataa 102  Q
    |||||||| ||| ||||| ||||||||||||||||| ||  ||| |||||||||||||||| |||||    
T  43299521 atttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataa 43299455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 43529960 - 43529910
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||||    
T  43529960 acaaaagataaaataaaatcaaactgctttcctataatctataagttgttt 43529910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 44438947 - 44438857
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||||||||||| ||  || || | ||||| ||| | ||||| ||||| || ||| ||| |||||||||||||||||    
T  44438947 caaaagataaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaa 44438857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 757438 - 757499
Alignment:
Q  68 actgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    |||||||| |||||| ||||||| ||||| || || ||||| || |||||||||||||||||    
T  757438 actgtgtttatataagctataagatgttttcaaaaattatcctggagagcttatggaaataa 757499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 4550740 - 4550793
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcata 101  Q
    ||||||| |||||| ||||| |||| ||||||||| ||||||||||||| ||||    
T  4550740 aaaagataaaataacgtcaagctgttttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 17952819 - 17952754
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| ||| ||| ||||| |||||    
T  17952819 atttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataa 17952754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 29429869 - 29429824
Alignment:
Q  43 atgacaaaagatgaaataaagtcaaactgtgttcatataatctata 88  Q
    |||||||||||| ||||||||||||||||| |||| |||| |||||    
T  29429869 atgacaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 29503188 - 29503100
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa--tttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||| ||||||||||||||| | |||| | ||  |||||| ||||| |||||  | |||| || ||||||||||||||||||||||||    
T  29503188 aagataaaataaagtcaaactattttcaaagaagttataagatgtttccataaactatatcttggagagcttatggaaataagctgaaa 29503100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 35485881 - 35485969
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcat-ataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| ||||||||||||||| | ||||| |||| |||||||||||||  ||||  |||| || ||||| ||||||||| |||||||||    
T  35485881 aaagataaaataaagtcaaactat-ttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaa 35485969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 43065517 - 43065468
Alignment:
Q  88 aagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagctgaaaa 43065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 43141834 - 43141915
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    ||||||| || |||||||||| ||| | ||||||| ||||||| ||||| |||||  |||| || |||| ||||||||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 44238110 - 44238057
Alignment:
Q  79 ataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    |||| ||||||||||||| || || |||||||| |||| |||||||||||||||    
T  44238110 ataagctataagttgttttcagaagttatcatggagagtttatggaaataagct 44238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 6227703 - 6227803
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||||||| ||||||||| |||| || | |||| || || |||||| |||||||| |||| |||||  |||  || ||||||||||| || |||||||||    
T  6227703 atttatataacaaaagataaaattaaattaaaccgtttttatataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaa 6227802  T
Q  137 a 137  Q
    |    
T  6227803 a 6227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 33256701 - 33256745
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataag 90  Q
    |||| |||| ||||||||||||||||| ||||||||| |||||||    
T  33256701 acaatagataaaataaagtcaaactgttttcatataaactataag 33256745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 36863732 - 36863640
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    ||||||| ||||||||||||||  | || ||||||  ||||| |||||| |||||  |||| || |||||||||| ||||||| || ||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataagttggaaatag 36863640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagc 117  Q
    |||||||||||| |||||||||  |||||||||||| ||||| ||||| || |||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 53943557 - 53943657
Alignment:
Q  35 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||| ||| ||||| ||||||||||| |||| |||| ||||||||| ||||||||||||| ||||| || ||||| ||||||||||||||||||||||    
T  53943557 ccatttttataacaaaggatgaaataaaatcaa-ctgttttcatataaactataagttgtttacataagttgtcatggagagcttatggaaataagctga 53943655  T
Q  135 aa 136  Q
    ||    
T  53943656 aa 53943657  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 927437 - 927502
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg 111  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||  |||||||    
T  927437 acaaaagatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatcatg 927502  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 7694115 - 7694028
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||| |||||||||||| ||  ||||| ||||||| ||||| ||||| ||||| || |||| ||||||||||||||||||||    
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaa 7694028  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 24929445 - 24929545
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| |||||||||| |||||| |||||| || ||||||||||||| |||||  | |  |  ||||||||||||||||||||||||    
T  24929445 atttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaa 24929544  T
Q  137 a 137  Q
    |    
T  24929545 a 24929545  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 49219091 - 49219191
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||||| || ||||||||||||| | | ||||||||| ||||||||||||| |||||  |||| |  |||| |||||||||||||||||||    
T  49219091 atttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaa 49219190  T
Q  137 a 137  Q
    |    
T  49219191 a 49219191  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 54325155 - 54325055
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||||| | ||| || ||  ||||||| |||| ||||||| |||| ||||||    
T  54325155 atttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaa 54325056  T
Q  137 a 137  Q
    |    
T  54325055 a 54325055  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 55870461 - 55870394
Alignment:
Q  35 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||| ||| ||||||||| ||||||||||||||||| |||| |||| ||||||||||||| |||||    
T  55870461 ccatttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataa 55870394  T

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Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 18628642 - 18628561
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||||||| || ||||||  |||||  ||||| ||||| ||||| || |||||||||||||||||||||||||    
T  18628642 aaatatagtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaa 18628561  T

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Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 51197580 - 51197500
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||| | ||||||||| |||||  |||||| |||||||||||||  |||||||||||||||||||| ||||    
T  51197580 aaataaattcaaactatattcatataagctatacattgttttcataatttatcat-cagagcttatggaaataagctaaaaa 51197500  T

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Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 30207679 - 30207589
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| || ||||||| ||||||||| ||||||||| ||||||||||||| |||||  || | |  |||| ||||||||||||||||||||    
T  30207679 acaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaa 30207589  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 21157742 - 21157820
Alignment:
Q  59 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||   |||| || |||||||||||||||||||| ||||    
T  21157742 taaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaaaa 21157820  T

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Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 20936328 - 20936247
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| |||||||| ||| || |||||||||||| ||||||| |||| | |||| || |||| ||||||||||||| ||||||    
T  20936328 aaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaa 20936247  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 35405934 - 35405999
Alignment:
Q  72 tgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||| ||||| ||||||| || || ||||| || ||||||||||||| |||||||||||    
T  35405934 tgttcatataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaa 35405999  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 36722757 - 36722684
Alignment:
Q  67 aactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    |||||| |||||||||  ||||||||||||  |||| ||||| || |||||||||| ||||||||| |||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaataagcttaaaatag 36722684  T

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Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 13949949 - 13949897
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||| ||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgtttgtataa 13949897  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 6466163 - 6466060
Alignment:
Q  38 tttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||| ||||| ||||||||| ||| | | ||  ||||||||||||||||||| |||||  |||  |  |||| ||||||||||||| ||||||    
T  6466163 tttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaa 6466064  T
Q  138 tagc 141  Q
    ||||    
T  6466063 tagc 6466060  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 8422944 - 8422860
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    ||||||| |||||||||||   ||| ||||||||| ||||||||||||| || ||| |||| || |||| ||||| |||||||||||    
T  8422944 aaaagataaaataaagtcat--tgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 11802495 - 11802586
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||||||||||| | |  ||| |||| ||| ||||||||| |||||  ||| ||| ||||||||||  |||||||||||||    
T  11802495 acaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaa 11802586  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 4071834 - 4071892
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtt 95  Q
    |||| ||| ||||||||| ||||||||||||| | | ||||||||| ||||||||||||    
T  4071834 atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 27623587 - 27623675
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctat---aagttgtttgcataatttatcatgtagagcttatg 122  Q
    |||| ||| ||||||||| ||||||||||||||| | || |||||| ||||   ||||||||| ||||| ||||| || ||||||||||    
T  27623587 atttgtataacaaaagataaaataaagtcaaactattttaatataagctataagaagttgttttcataagttatcctggagagcttatg 27623675  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 30581784 - 30581702
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 130  Q
    ||||||| |||| |||||||||| | ||| ||||| ||||||| |||||  |||| ||||| || |||| |||||||||||||    
T  30581784 aaaagataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 35064817 - 35064907
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||  ||||||| ||  ||||  ||||| | ||||| |||||  ||||||| |||| ||||||||||||||||||||    
T  35064817 caaaagataaaataaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaa 35064907  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 52735083 - 52735169
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    ||||||||| ||||||||||||| |   |||||||||  |||| ||||||| | |||  |||| || ||||||||||||||||||||    
T  52735083 acaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagct 52735169  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 29263341 - 29263422
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| | | ||| |||| |||| | ||||||||||| |||||  |||| || ||||||| |||||||||||||||||    
T  29263341 aaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaa 29263422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 33534276 - 33534187
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||| |||||| || |  |||||||||| ||||||||| | ||| ||||  |  |||||||||| ||||||||||||||    
T  33534276 aaaagataaaataaaatcaaaccgtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaa 33534187  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 49085941 - 49086006
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||| ||||||||| |||||| |||||||| | |||||| ||  |||||||||||| |||||    
T  49085941 atttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataa 49086006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 10192236 - 10192335
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||||||||  |||||||||||| ||| |||||||||  |||||||||||| || ||  |||| || ||||| |||| ||||||| |||||    
T  10192236 atttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaa 10192334  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 25434567 - 25434519
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||| ||||||||||||  ||| ||||||||| |||||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttgttt 25434519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 42866047 - 42866115
Alignment:
Q  64 tcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    ||||||||| || |||||| ||||||||||||| |||||  |||| |  ||||||||||||| ||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagct 42866115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 45128428 - 45128328
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| |||| || ||||| | |  |||||||| |||||| |||||| |||||  | || | || ||||||||||||||||||||||    
T  45128428 atttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataaactgtcctataaagcttatggaaataagctgaaa 45128329  T
Q  137 a 137  Q
    |    
T  45128328 a 45128328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 51630063 - 51630163
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||||||  |||||||| ||||||||| ||| ||| || |||||| ||||||| | ||| |||||  |||| || |||  ||||| |||||||||||||    
T  51630063 atttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaa 51630162  T
Q  137 a 137  Q
    |    
T  51630163 a 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 2117355 - 2117455
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||||||||| ||| ||| ||||||||||| | ||||||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||| |||    
T  2117355 atttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaa 2117454  T
Q  137 a 137  Q
    |    
T  2117455 a 2117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 8420296 - 8420211
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||||||||||||||||||| ||||||  |||||| ||||  | |||  ||| ||| |||||||||||||||||| ||||||||||    
T  8420296 aaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggagagcttatggaaataagttgaaaatagc 8420211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 32386670 - 32386581
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||||| |||||| ||| |||||||||  |||| ||||||| ||| | ||||| || |||||||||| ||||||||||||||    
T  32386670 aaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaa 32386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 1275133 - 1275201
Alignment:
Q  69 ctgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||||||||| ||||||| ||||| ||||  ||||| || |||||||||||||||||||||||||    
T  1275133 ctgttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaataagctgaaaa 1275201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 1401067 - 1401158
Alignment:
Q  42 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    ||||||||||||| ||||||| ||||||||  ||  ||||| ||||||| ||||| |||||  ||||||| |||||||||||| |||||||||    
T  1401067 tatgacaaaagat-aaataaaatcaaactgctttagtataagctataagctgttttcataagctatcatggagagcttatggagataagctga 1401158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 2027524 - 2027424
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| ||||||| ||||  |||||  || ||||||||| |||   |||||||||||||    
T  2027524 atttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaa 2027425  T
Q  137 a 137  Q
    |    
T  2027424 a 2027424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 33787863 - 33787763
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||||| || ||| ||||||||| ||  |||||||||  |||||| ||||| ||||| ||||| || |||||||||||||||| |||||||    
T  33787863 atttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaataggctgaaa 33787764  T
Q  137 a 137  Q
    |    
T  33787763 a 33787763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 281957 - 281866
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||||||||||  ||| ||||||||| ||||||| ||| | |||||  |||| |  |||||| ||||||||||||||||||    
T  281957 acaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaa 281866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 3155137 - 3155227
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||| ||||||||||||| | ||||||| ||||||| | ||| |||||  |||| || ||||| |||||||||||||||||||    
T  3155137 acaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagc-tatggaaataagctgaaaa 3155227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 4006666 - 4006768
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||| ||| ||||||||||||| ||| || |||||| ||||||||||||| |||||  ||||    |||| ||||| |||||||||||||    
T  4006666 atttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaa 4006765  T
Q  137 ata 139  Q
    |||    
T  4006766 ata 4006768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 24836317 - 24836224
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctg 133  Q
    |||| ||| ||||||||| ||||||||||||| ||| ||| ||||| ||||||||| |   | |||  ||||||| |||||||||||||||||||||    
T  24836317 atttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtttt---cgtaagctatcatggagagcttatggaaataagctg 24836224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 25100005 - 25100099
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||| |||||||| ||||||| ||| |||||| ||  |||||||||||| |||||  |||| |  ||||||||| |||||||| ||||||||||    
T  25100005 caaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaatagc 25100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 1408324 - 1408285
Alignment:
Q  98 cataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  1408324 cataagttatcatatagagcttatggaaataagctgaaaa 1408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 5328926 - 5329024
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||||  | || ||||||| |||||| ||||| | ||| |||||||| |||| ||||| ||||||| |||||    
T  5328926 atttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaa 5329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 6310342 - 6310283
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||| ||| |||||||||||| ||||||| || ||| ||||||||| |||||||||||||    
T  6310342 atttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgttt 6310283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 28088335 - 28088240
Alignment:
Q  42 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||| |||||||  || | ||| ||||||||| ||||||  ||||| |||||  ||||||| |||||| ||||||||||||| ||||    
T  28088335 tatgataaaagataaaataaatgcagattgttttcatataagctataaactgttttcataagctatcatggagagctcatggaaataagctcaaaa 28088240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 1497943 - 1498033
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| | ||||||||||||||||| ||||||| |  ||||||  |||| |||||  |||| || |||||||||| ||||||| ||||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaataaggtgaaaa 1498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 20671973 - 20671884
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||||||| ||| ||| ||||| || ||| |||||| |||||  ||||||  ||||||| ||||| |||||||||||    
T  20671973 caaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagagagctt-tggaagtaagctgaaaa 20671884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 3181177 - 3181093
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 131  Q
    ||||||||| |||||||||||||| || ||||||||| | ||||  ||||| ||||| ||||| || ||||| ||| |||||||||    
T  3181177 acaaaagataaaataaagtcaaaccgttttcatataaaccataaactgttttcataagttatcttggagagc-tattgaaataagc 3181093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 10452478 - 10452413
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||| ||| |||||| || ||||||| ||||||| | ||||||||| ||||||||||||| |||||    
T  10452478 atttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 27792833 - 27792924
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| |||||| |||||||| | ||||||||| ||  ||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  27792833 acaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagctgaaaa 27792924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 24887401 - 24887301
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||| |||| ||||||||||||||||| ||||||||| ||| ||| ||||| |||||  |||| || ||||||||||| ||||||||||||    
T  24887401 atttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaa 24887302  T
Q  137 a 137  Q
    |    
T  24887301 a 24887301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 14548802 - 14548734
Alignment:
Q  74 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagcc 142  Q
    ||||||||| ||||||||||||| ||||| ||||  || ||||||||||||||||||||||||| ||||    
T  14548802 ttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcc 14548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 20192724 - 20192624
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||   ||| ||||   | ||||||||||||||| || |||||    
T  20192724 atttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagagcttatggaaatgagttgaaa 20192625  T
Q  137 a 137  Q
    |    
T  20192624 a 20192624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 23785220 - 23785307
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||||||||||||| ||||||||| ||||||  ||||| || ||  | ||||| |||||||||||||| ||||||||||    
T  23785220 aagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaa 23785307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 45433046 - 45432957
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||| |||| ||| ||| ||||||| | |||||| |||||| || || | ||| ||||||||||||||||||||||||||||    
T  45433046 aaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaa 45432957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 36101533 - 36101620
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||||||| ||| ||  |||| || |||||||||| ||||||||||||||    
T  36101533 aagataaaataaagtcaaactgatttcgtataatctataagttgttt-cattatactatcctgaagagcttatgaaaataagctgaaaa 36101620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 44374753 - 44374659
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||||| ||||||||||||| ||| |||||| |||||| || |||||| | |||  |||| || |||||| ||||||||||| ||||||||||    
T  44374753 acaaaagataaaataaagtcaaattgttttcatacaatctaaaatttgttt-cgtaagatatcttggagagctaatggaaataaggtgaaaatagc 44374659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 51510271 - 51510216
Alignment:
Q  77 atataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    |||||| ||||||||||||| ||||| ||||| || ||||||||||||||||||||    
T  51510271 atataaactataagttgttttcataagttatcgtggagagcttatggaaataagct 51510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 1816546 - 1816640
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagcc 142  Q
    ||||||| ||||||||||||||||| ||  |||||  |||||||||||| |||||  |||  || |||||||||  |||||||||||||| ||||    
T  1816546 aaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcc 1816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 20502176 - 20502086
Alignment:
Q  48 aaaagatgaaataaagtcaaa-ctgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||||||||| |||| ||||||||  ||||||| ||||| |||||  |||| || ||||||||||  |||||||||||||    
T  20502176 aaaagatcaaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaataagctgaaaa 20502086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 21367638 - 21367719
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||| ||| ||| |||||| |||||||||||| |||||  |||| || ||| |||||| ||||||||||||||    
T  21367638 aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaa 21367719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 22232778 - 22232871
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 130  Q
    |||||||| ||||| ||| ||||||||||||||||| |||||||||    |||| | ||| |||||  |||||||||| ||||||| |||||||    
T  22232778 atttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtagggcttatgaaaataag 22232871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 23315591 - 23315676
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 135  Q
    ||||| ||||||||||||| ||| ||||||||  ||||||| ||||| |||||  |||  |  |||||||||||||||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataagctgaa 23315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 28779322 - 28779367
Alignment:
Q  51 agatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||    
T  28779322 agatgaaataaagtcaaactattttcatataagctataagttgttt 28779367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 33965600 - 33965504
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatat--aatctataagttgtttgcataatttatcatgtagagcttatgg-aaataagctgaaaata 139  Q
    ||||||| | ||||||||||||||||| |||||||  || ||||||| ||||| |||||  |||| || ||||||||||| ||| ||||||||||||    
T  33965600 acaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatggaaaaaaagctgaaaata 33965504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 48286908 - 48286831
Alignment:
Q  57 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||||| ||| ||| | |||||||  |||||  ||||| ||||| |||||||||||||||||| ||||||||||||    
T  48286908 aataaagttaaattgtttccatataagttataaactgttttcataagttatcatgtagagcttatagaaataagctga 48286831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 237397 - 237449
Alignment:
Q  85 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||| ||||| ||||| | ||||||||| ||||||||||||||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaa 237449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 1125873 - 1125785
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgtt-catataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||||| |||| || ||||||||| || ||||||| |||||| |||||| | ||| ||||| || ||||||||||||| ||||||||||    
T  1125873 aaagataaaatcaattcaaactgtttttcatataagctataacttgttttcttaagttatcttggagagcttatggaagtaagctgaaa 1125785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 2318609 - 2318697
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataattta-tcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| |||| || ||||| ||| ||||||||| |||||||||||||  |||| ||| || || ||||||||| |||||||||||||||    
T  2318609 aagataaaatcaaatcaaattgttttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagctgaaaa 2318697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 36139843 - 36139930
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||||||||||||  ||| ||||| ||||||||||||| ||| ||  |||| || |||||||||| ||||||||||||||    
T  36139843 aagataaaataaagtcaaactgatttcgtataagctataagttgttt-cattatactatcttgaagagcttatgaaaataagctgaaaa 36139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 43115048 - 43115108
Alignment:
Q  77 atataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| ||||||||||||| ||| |  ||||||  |||||||||||||||||||||||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaa 43115108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttat 121  Q
    ||||||||||||  |||||||| ||||||||||||| |||||  ||||||| |||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 47904144 - 47904084
Alignment:
Q  74 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||||||||||||||| |||| |||||  |||| || |||||||| |||||||||||||    
T  47904144 ttcatataatctataagtggttttcataagctatcgtgaagagcttacggaaataagctga 47904084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 27291006 - 27290919
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||| || |||| | ||||||||||||| ||| ||||||||| |  |||| || |||| | ||||||||||||||||||    
T  27291006 aagataaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcagagttcatggaaataagctgaaaa 27290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 44295522 - 44295581
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||||||| |||||  |||   | |||||||||||||||||||||||||    
T  44295522 tataatctataagttgttttcataagatatatcggagagcttatggaaataagctgaaaa 44295581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 54775080 - 54775178
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||||  | || ||||||| |||||| ||||| | ||| |||||||| |||| ||||| ||||||| |||||    
T  54775080 atttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaa 54775178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 25453963 - 25453877
Alignment:
Q  51 agatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||||||||||||||||| ||| ||||| ||||||  | ||| |||||  |||| || | |||||||| ||||||||||||||    
T  25453963 agataaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaa 25453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 40122861 - 40122812
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  40122861 acaaaagataaaataaagtcaaactgttttcata-aagctataagttgttt 40122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 49587034 - 49586984
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctat 87  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  49587034 atttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 8933745 - 8933834
Alignment:
Q  43 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    ||||||||| ||| |||||||||||||| | ||  || || || || ||||||| ||||| ||||| || |||||||||| |||||||||    
T  8933745 atgacaaaaaatgtaataaagtcaaactatttttgtagaagctctaggttgttttcataagttatcttggagagcttatgaaaataagct 8933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 13481256 - 13481349
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 139  Q
    |||||| || ||||||||||||||| | |||| |||| ||| ||||||| | || || |||| ||| |||||||| | ||||||| ||||||||    
T  13481256 acaaaatataaaataaagtcaaactattttcaaataagctacaagttgtcttcaaaaattattatggagagcttacgaaaataagatgaaaata 13481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 2201092 - 2201180
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| ||| ||||||||||||| ||||||||| ||||||| ||||| ||| |  |||| || | || ||| ||||| ||||||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaa 2201180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 12923432 - 12923384
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||| ||||||||||||||||  ||| ||||| |||||||||||||    
T  12923432 aaaagataaaataaagtcaaactgctttcttataagctataagttgttt 12923384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 16990255 - 16990179
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||||||| |||||||||  |||||||||||| | |||  ||||||| ||| ||| || ||||||||||||||    
T  16990255 aagttaaactgttttcatataagatataagttgttttcttaaactatcatgaagaacttgtgcaaataagctgaaaa 16990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 19679427 - 19679387
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    ||||||||||||||||| ||| ||||| |||||||||||||    
T  19679427 aaataaagtcaaactgttttcttataagctataagttgttt 19679387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 21862285 - 21862193
Alignment:
Q  46 acaaaagatgaaata-aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||| |||||||| ||| ||||||||| |||| ||| |||  ||| |  ||||  | |||||||||||||||||||||||||    
T  21862285 acaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataagctgaaaa 21862193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 22214799 - 22214735
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcata 101  Q
    |||| ||| ||||| ||| ||||||||| ||| ||| ||||||||| ||||||||||||| ||||    
T  22214799 atttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttgttttcata 22214735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 26603164 - 26603244
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||||||||||||    |||||||  ||||||| ||||||||||||  |||| || | |||||||||||||||| |||||    
T  26603164 aaataaagtcaaaccagcttcatattctctataacttgtttgcataagctatcctgcaaagcttatggaaataagttgaaa 26603244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 31337510 - 31337462
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgt 94  Q
    ||||||||| ||||||||||||||||| || ||||||  ||||||||||    
T  31337510 acaaaagataaaataaagtcaaactgtttttatataagttataagttgt 31337462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 36646500 - 36646400
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||||||||||||| |||||||||  || ||| |||||||||  ||||| |||||| |||||  |||| |  |||| |||| |||||||| |||||    
T  36646500 atttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaa 36646401  T
Q  137 a 137  Q
    |    
T  36646400 a 36646400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 37788821 - 37788877
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||||||| |||||||||| || | | ||| ||||||||||||||||||| |||||    
T  37788821 acaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataa 37788877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 45205025 - 45205120
Alignment:
Q  42 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| ||||||| ||||||||||||||| | | ||||||| ||| ||||||||| |||||  |||||||||||| | ||||||||||||||||||    
T  45205025 tatgataaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaa 45205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 37842463 - 37842373
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||||||||| |||||||||||  |||| ||||||||||||| |||||  |||| || ||| |||||  ||||||||||||||    
T  37842463 caaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaa 37842373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 30257646 - 30257735
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||||||||||||| | ||||||| || |||||||||| |||||  |||| || || |||||| |||||||||||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaa 30257735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 30259605 - 30259504
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcat-aatttatcatgtagagcttatggaaataagctgaa 135  Q
    |||| ||| |||||| || ||||||||||||||||  || |||||| ||||||| ||||||||| ||  ||||||| |||||||||||||||||| ||||    
T  30259605 atttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataagttgaa 30259506  T
Q  136 aa 137  Q
    ||    
T  30259505 aa 30259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 15515513 - 15515597
Alignment:
Q  57 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||||| ||||| ||| ||| ||||| ||||||||||||| ||||| |||||||| | |||||||||||||||  ||||||||||    
T  15515513 aataaaatcaaaatgttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataaattgaaaatagc 15515597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 8130409 - 8130488
Alignment:
Q  58 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||||  ||||||| | | |||||||||| ||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaa 8130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 34380406 - 34380497
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||  |||||||||||||||| | ||||||   |||| ||||||| | ||| |||||||||| ||||||| |||||||||||||||    
T  34380406 acaaaagatacaataaagtcaaactgtttgcatatacattatatgttgttttcgtaacttatcatgtacagcttattgaaataagctgaaaa 34380497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 44032108 - 44032013
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||| | ||||||||||||| ||| ||||||||| ||||||  | ||| | ||| ||||| || ||||||||||||||| |||||||||||||    
T  44032108 acaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaatagc 44032013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 4078242 - 4078168
Alignment:
Q  62 agtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||||||| | ||||||||||||||||||||||| |||||  |||||||  ||||| ||| |||||||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaataagctgaaa 4078168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 33527256 - 33527194
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatc 108  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  33527256 acaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatc 33527194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 42556749 - 42556647
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||||||||||||||||||||| |||||||   || |||||| ||||||||||||| |||||  ||||||| |||| ||||   ||||| ||||||    
T  42556749 atttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctatcatggagagtttatatcaataaactgaaa 42556650  T
Q  137 ata 139  Q
    |||    
T  42556649 ata 42556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 7218173 - 7218092
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| |||||  |||| || ||| |||||| ||||||| ||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 15360846 - 15360903
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgt 94  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  15360846 atttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 12564964 - 12564892
Alignment:
Q  65 caaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||| ||||||||||||| |||||  |||| | ||| ||||| ||||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaa 12564892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 25479545 - 25479633
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| |||||| |||||| ||| ||||||||  ||||||||||||| |||||  |||| |  |||||||||| ||||||||||||||    
T  25479545 aaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 30371104 - 30371200
Alignment:
Q  41 atatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||||||||| ||||||| ||||| ||| ||||||||| ||||||||||||| |||||   ||  || ||||| ||| |||||||||||||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaa 30371200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 31517849 - 31517758
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||||||| ||| ||  ||||||||| ||||||| ||| | |||||| | || || |||||||||| ||||||||||||||    
T  31517849 acaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaa 31517758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 39348076 - 39347985
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| |||||||||| |||  |  ||||| || ||||||||||||| |||||  |||| || | |||||||||||||||||||||||    
T  39348076 acaaaagataaaataaagtccaaccattctcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaa 39347985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 44940305 - 44940393
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| |||||||||||  |||| |||| ||||  |||||||||||| |||||| |||| || |||| || |||||||||||||||||    
T  44940305 caaaagataaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatcctgaagaggttgtggaaataagctgaaaa 44940393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 27738289 - 27738203
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 132  Q
    ||||||||| ||||||||||||| ||| ||||||||| |||||| |||||| |||||  |||   | |||||||||||| |||||||    
T  27738289 acaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataagct 27738203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 6933081 - 6932980
Alignment:
Q  35 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||| ||| |||||| || ||||||||||||| ||| |||||| ||  ||| |||| ||| ||||| || || || ||||||||||||||||| ||||    
T  6933081 ccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagcttatggaaataaactga 6932982  T
Q  135 aa 136  Q
    ||    
T  6932981 aa 6932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 3924576 - 3924676
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||| ||||| |||| ||| |||||||| ||| |||||||||| ||||||||  ||||  |||| || |||| |||||||||||||| ||||    
T  3924576 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaa 3924675  T
Q  137 a 137  Q
    |    
T  3924676 a 3924676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 35017539 - 35017630
Alignment:
Q  50 aagatgaaataaagtcaaac--tgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 139  Q
    ||||| ||||||||||||||  ||| ||| ||||||||||| | ||||| |||||  | || || |||||||||||||||||| ||||||||    
T  35017539 aagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaataagttgaaaata 35017630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 39777615 - 39777715
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| |||||||||  |||||||||||||||  |||||| || ||||| | ||||| | ||| |||| ||| |||||||| ||||||||||| |||    
T  39777615 atttctataacaaaagatagaataaagtcaaactgctttcatacaagctatatgatgttttcttaagttataatgaagagcttaaggaaataagctaaaa 39777714  T
Q  137 a 137  Q
    |    
T  39777715 a 39777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 46980237 - 46980153
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 131  Q
    |||||||| |||||||| |||||||| |||||||||  ||||| |||||| |||||  | | ||||| || ||||||||||||||    
T  46980237 caaaagataaaataaagacaaactgttttcatataagttataaattgttttcataaactgttatgtatagtttatggaaataagc 46980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 49175619 - 49175671
Alignment:
Q  85 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| |||||| ||  ||||||||||| |||||||||||||||||||||    
T  49175619 tataagttatttgcacaagctatcatgtagaacttatggaaataagctgaaaa 49175671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 5756804 - 5756745
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||| ||| ||||||||||| ||||||| ||||||| |||||||||  ||||||||||||    
T  5756804 atttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttt 5756745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 6074426 - 6074485
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||| ||| ||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||    
T  6074426 atttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttt 6074485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 7472304 - 7472363
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| ||||| |||||  |||| || |||||||||| ||||||||||||||    
T  7472304 tataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 10581189 - 10581130
Alignment:
Q  43 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||| ||| ||||||||||||||| | ||||| ||| ||||||||||||| |||||    
T  10581189 atgacaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataa 10581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 33723479 - 33723400
Alignment:
Q  58 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||| ||| ||||||||| |||| |  ||||| |||||  || | |||| |||||||||||||||||||||||    
T  33723479 ataaagtcaaattgttttcatataaactatgaactgttttcataagctaccctgtaaagcttatggaaataagctgaaaa 33723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 35590969 - 35590910
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||| |||||||| | || |||||  ||||||| |||||||||||||||||||||||||    
T  35590969 tataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaa 35590910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 52286639 - 52286734
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||||| ||||||||| ||||  | ||||||||| ||||||  | ||| ||||| | ||| || |||| ||||||||||||||| ||||||||    
T  52286639 acaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaagagtttatggaaataagctaaaaatagc 52286734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 4215334 - 4215424
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| ||| |||| | ||| ||||| |  |||| ||||| ||||||| ||||||    
T  4215334 caaatgataaaataaagtcaaactgttttcatataaactatgagtcgttttcgtaagttatccttgagagtttatgcaaataaggtgaaaa 4215424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 6231916 - 6231834
Alignment:
Q  56 aaataaagtcaaactgtgtt-catataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||||| || ||||||||||||||| ||||| | |||  || | || ||| ||||| |||||||||||||||    
T  6231916 aaataaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaa 6231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 17269221 - 17269295
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 130  Q
    ||||||||||||| ||| ||||||||| | ||||||||||| |||||  |||| || |||||||| || ||||||    
T  17269221 aaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaataag 17269295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 25006133 - 25006087
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| |||||    
T  25006133 aaataaagtcaaattgttttcatataagctataagttgttttcataa 25006087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 3320039 - 3319950
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||||||||  |||||  ||||||||| ||||||||||||  | |||  ||||||  ||| |||||||| ||||||||||||    
T  3320039 aaaagataaaataaagtagaactggtttcatataaactataagttgttaacgtaagctatcatagagatcttatggatataagctgaaaa 3319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 5150908 - 5150989
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||| | ||||| |||  | ||| |||||| |||||  ||||||| ||||||||| |||||||| ||||||    
T  5150908 aaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataagttgaaaa 5150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 5422032 - 5421979
Alignment:
Q  43 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||||||||||| ||||| ||||||| ||| ||| ||||| |||||||||||||    
T  5422032 atgacaaaagataaaatatagtcaaattgttttcttataagctataagttgttt 5421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 7137075 - 7137014
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 139  Q
    ||||||||||||| ||||| |||||  |||| || ||| |||||| ||||||||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaata 7137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 7274057 - 7273992
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||| ||| ||||||||||||||||||||||| ||| |||||| ||  |||||| ||||| |||||    
T  7274057 atttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataa 7273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 12477394 - 12477305
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||||||||||||| ||||| |||  |||| | | |||  ||||  ||||||| ||||  |||||||||||||||||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaa 12477305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 27887217 - 27887136
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||  | | ||||||| ||||||||||||| |||||  ||||||| ||||| |||  ||||||||| ||||    
T  27887217 aaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaa 27887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 37272694 - 37272633
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatc 108  Q
    |||||| | |||||||||||| |||| ||||||||| ||||||| ||||| ||||| |||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataaattatc 37272633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 49517022 - 49517087
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||| ||| ||||||||| ||||||||||||| ||| ||||| ||| ||||||| ||||| |||||    
T  49517022 atttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataa 49517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 4200181 - 4200281
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||  ||| ||||||||| |||||  |||||| | |||  |||| || || ||||||| ||||||||| |||    
T  4200181 atttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatgaaaataagcttaaa 4200280  T
Q  137 a 137  Q
    |    
T  4200281 a 4200281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 5047166 - 5047198
Alignment:
Q  105 tatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||||||||||||||||||||||||    
T  5047166 tatcatgaagagcttatggaaataagctgaaaa 5047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 12564616 - 12564517
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| |  ||||||||||| || |||||| ||  |||| ||||||| |||||  |||| || ||| ||||||||||||||||||||    
T  12564616 atttctataacaaaagataacctaaagtcaaaccgt-ttcatacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaa 12564518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 28467416 - 28467360
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||||||| ||||||||||||| | | ||||||||| ||| ||||||||| |||||    
T  28467416 acaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataa 28467360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 44151589 - 44151498
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||  |||||||| ||||||| | ||||||| ||||||||||||| |||||  |||| || | |||||||||||||||||||||||    
T  44151589 acaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaa 44151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 39505919 - 39506012
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||||||| ||||| ||||||||||| ||||||||| |  |||||||||| |||||  |||  || |||| ||||||||||||||||||||||||    
T  39505919 caaaagattaaatagagtcaaactgt-ttcatataagcattaagttgttttcataagctattctggagagtttatggaaataagctgaaaatagc 39506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 1417216 - 1417281
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||| ||||||||| ||||||||||||| ||| ||||||||| | ||||||||||| |||||    
T  1417216 atttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataa 1417281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 31338471 - 31338560
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||||||||||||||| || ||||||  |||||||||||| |||||  |||| | | ||||||||| ||||||| ||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaataaggtgaaaa 31338560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 45777287 - 45777230
Alignment:
Q  39 ttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||||| ||||||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  45777287 ttatataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttt 45777230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 9527199 - 9527143
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||||  |||||||||||||||| ||||||||| ||||||||||||| |||||    
T  9527199 acaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 17989132 - 17989049
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    |||||| || ||||||||||||||||| ||||||||| |||||| |||||| |||||  | || || |||||||||| ||||||    
T  17989132 acaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 29363483 - 29363562
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    ||||| ||||||||||||||||| ||||||| |  |||||| ||||  ||||| ||||| || |||||||||||||||||    
T  29363483 aagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 30456559 - 30456476
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    ||||||||| ||||||||||||| ||| |||||||||  ||||||| |||| |||||  |||| || |||||||||| ||||||    
T  30456559 acaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 38010675 - 38010766
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||| |||| |||| ||| ||||||||| ||||||| ||||| |||||| |||| |  ||| |||||||||||||||| ||||    
T  38010675 acaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaa 38010766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 21185039 - 21185140
Alignment:
Q  35 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||| |||||||||| || || |||| | | ||||| ||||||||||||||||| ||||| |||||  |||  || ||||||||| ||||||||||||    
T  21185039 ccatttctatgacaaaaaataaattaaatttagactgttttcatataatctataagctgtttccataagatat-ttgaagagcttattgaaataagctga 21185137  T
Q  135 aaa 137  Q
    |||    
T  21185138 aaa 21185140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 44910566 - 44910656
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||  ||||||||||||||| | |||| | || ||| ||||||||| |||||  ||||||| ||||||| ||||||||||| |||||    
T  44910566 caaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagcttgtggaaataagccgaaaa 44910656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 18516348 - 18516303
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcata 101  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  18516348 aaataaagtcaaattgtgttcatataagctataagttgtttccata 18516303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 45813288 - 45813239
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 96  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||||||||    
T  45813288 caaaagataaaataaagtcaacttgttttcatataatctataagttgttt 45813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 5006618 - 5006562
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||| |||||| |||||    
T  5006618 acaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataa 5006562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 27481388 - 27481320
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    |||||||||||| | ||||||| ||||||||| ||| |||||  ||||||| | |||||||||||||||    
T  27481388 aagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 36370645 - 36370713
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    |||| ||||||| |||| |||| ||||||||||||| |||||  |||| || |||||||||||||||||    
T  36370645 aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaataa 36370713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 1373658 - 1373567
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 128  Q
    |||| ||||||||||||| || |||||||||||| | |||||||| |||||||  ||||| |||||  |||| || || ||||||| |||||    
T  1373658 atttttatgacaaaagataaattaaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggcttatgaaaata 1373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 3610849 - 3610758
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| |||| ||| |||||||| ||  ||||| ||||||||||||| | |||  |||| |  ||||||||| |||||||||||||||    
T  3610849 acaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 28165052 - 28165143
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| |||| |||||||| ||| || |||||| ||||||  ||| |  ||||  ||||||| |||||||||||||||||| ||||||    
T  28165052 acaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaa 28165143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 24909638 - 24909716
Alignment:
Q  59 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||| | | ||||||||| ||||||||||||| |||||  |||  || ||||||| |||||||| ||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttgttttcataagatattgtggagagcttgtggaaatatgctgaaaa 24909716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 34754905 - 34754828
Alignment:
Q  59 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||| ||| ||||||||| |  |||||||||| |||||  |||| || |||||| ||||||||||||||||||    
T  34754905 taaagtcaaaatgtcttcatataagccgtaagttgttttcataaactatcctg-agagctgatggaaataagctgaaaa 34754828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 3559010 - 3559087
Alignment:
Q  60 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||||| | |||||||||||||||  |||| ||| |  |||| |||| ||||||| |||||||||||||||    
T  3559010 aaagtcagactgtttacatataatctataagccgttttcattaactatcttgtatagcttatagaaataagctgaaaa 3559087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 1350337 - 1350269
Alignment:
Q  60 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 128  Q
    ||||||||||| | |||| |||||||||||| ||||| |||||  |||| || |||||||||| |||||    
T  1350337 aaagtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagcttatgaaaata 1350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 24363671 - 24363619
Alignment:
Q  85 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||| |||||  |||| || |||| ||||||||||||||||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaa 24363619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 44241852 - 44241912
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 138  Q
    ||||| ||||||||||||| |||||  |||| || | ||||||| ||||||||||||||||    
T  44241852 tataacctataagttgttttcataagctatcttgaatagcttatagaaataagctgaaaat 44241912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 42181210 - 42181107
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||| |||||||||  || ||||||||| |||||||||||||||| || ||||| |  |||||| | |||||||||||||||    
T  42181210 atttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagttatcctagagagctcaaggaaataagctgaaa 42181111  T
Q  137 atag 140  Q
    ||||    
T  42181110 atag 42181107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 37588467 - 37588378
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| ||||| ||||  || |||||||||||||||||||||||||    
T  37588467 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 37588378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 14295458 - 14295558
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||||| ||||| | |||  |||| || ||||||| | ||| ||||||||||    
T  14295458 atttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaa 14295557  T
Q  137 a 137  Q
    |    
T  14295558 a 14295558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 29054897 - 29054952
Alignment:
Q  74 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    ||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||    
T  29054897 ttcatataagctataagttgtttccataaactatcatgtagagcttatggaaataa 29054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 36539708 - 36539798
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| |||||||||||| |||| ||||||||| |||||||||||||  |||| ||||  || ||||||| ||| ||||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagcttttggtaataaactgaaaa 36539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 37690744 - 37690654
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| |||||  |||| ||| |||||||||||||||||||||||||    
T  37690744 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaa 37690654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 17368647 - 17368728
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| |||||||||||| ||  | ||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||||    
T  17368647 aaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaa 17368728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 37526306 - 37526217
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| ||||| || |  || |||||||||||||||||||||||||    
T  37526306 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaa 37526217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 32172614 - 32172706
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 138  Q
    ||||||||| |||| |||||||  ||| | ||||||| ||||||| ||||| |||||  ||||||| ||| || |||||||||||||||||||    
T  32172614 acaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaat 32172706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 41016150 - 41016230
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||||| ||||||||| ||||||||| ||||||||||||| || ||   |||||| | |||||||| |||||||||||||    
T  41016150 aaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagctgaaa 41016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 28586891 - 28586784
Alignment:
Q  30 atacaccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    |||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||  |||||| |||||  |  |  |||| |  ||||||||| |||||||    
T  28586891 atacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataa 28586792  T
Q  130 gctgaaaa 137  Q
    ||||||||    
T  28586791 gctgaaaa 28586784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 26390897 - 26390808
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| |||||| || ||||||| ||||||||| ||||||| || || | ||| ||||| || |||||||||||||||||| ||||||    
T  26390897 caaaagataaaataa-gttaaactgttttcatataagctataagatggtttcctaagttatcctggagagcttatggaaataaggtgaaaa 26390808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 9106796 - 9106873
Alignment:
Q  60 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| ||  ||||||||||||| | ||| ||||| ||||| ||   |||||||||||||||||||||||    
T  9106796 aaagtcaaactgtttttgtataatctataagctattttcataagttatcctgctaagcttatggaaataagctgaaaa 9106873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 10272538 - 10272449
Alignment:
Q  48 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||| |||||||| ||| ||| ||||| ||||||||||||| |||||   ||| || |||| ||||| ||||||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaa 10272449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 17258982 - 17258901
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||| | ||| || |||| ||||| ||||| |||||  |||| || |||||||||| ||||||||||||||    
T  17258982 aaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaa 17258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 18543315 - 18543215
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaact-gtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 135  Q
    |||| ||| |||||| || ||||||||||||||| || || ||||||  |||||||||||| |||||  |||| || ||||||||| |||||||||||||    
T  18543315 atttgtatcacaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttat-gaaataagctgaa 18543217  T
Q  136 aa 137  Q
    ||    
T  18543216 aa 18543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 39823239 - 39823174
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||| ||||||||| |||||||||||||||   ||||||||| ||| ||||||||| |||||    
T  39823239 atttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataa 39823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 18704153 - 18704054
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||| |||||||||||| || | || |||||| ||||||||||||| |||||  ||| |   ||| ||||||||||||||||||||    
T  18704153 atttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaa 18704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 19177444 - 19177532
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg-tagagcttatggaaataagctgaaaa 137  Q
    ||||| |||| ||||| |||||| ||||||||| ||||||||||||| | ||| || |||||  |||||||||||||||| | ||||||    
T  19177444 aagataaaattaagtctaactgttttcatataagctataagttgttttcgtaagttctcatgaaagagcttatggaaatatgttgaaaa 19177532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 32059694 - 32059642
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||| ||||||||||||||||| ||||||||| ||||||| ||||| |||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 11104899 - 11104970
Alignment:
Q  66 aaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||  ||||||||||||| | ||| ||||| |||||    |||||||||||||||||||||||||    
T  11104899 aaactgtgtttgtataatctataagctattttcataagttatctgcaagagcttatggaaataagctgaaaa 11104970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 15003623 - 15003540
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 129  Q
    ||||||||| ||||||| ||||||| | ||||||||| |||||||| |||| |||||  ||||    |||||||||||||||||    
T  15003623 acaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagcttatggaaataa 15003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 35135780 - 35135725
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagtt 92  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| |||||||||    
T  35135780 atttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagtt 92  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 19138816 - 19138735
Alignment:
Q  58 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgt--agagcttatggaaataagctgaaaa 137  Q
    ||||| ||||| ||| |||| |||| ||||||||||||| |||||  ||| || |  |||||||||||||||||||||||||    
T  19138816 ataaattcaaattgttttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaa 19138735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 31030229 - 31030147
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 138  Q
    ||||||||||||  |||  |||||||| |||||||| |||| | |||  | || || ||||||||||||||||||||||||||    
T  31030229 aaataaagtcaagttgttatcatataagctataagtagttttcctaagctgtcctggagagcttatggaaataagctgaaaat 31030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 2568651 - 2568712
Alignment:
Q  78 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 139  Q
    ||||| ||||||||||||| |||||  ||||||| |||||| ||| ||||||||| ||||||    
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaata 2568712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 15074820 - 15074767
Alignment:
Q  84 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| ||||| ||||  || | |||||||||||||||||||||||    
T  15074820 ctataagttgttttcataagttatactggaaagcttatggaaataagctgaaaa 15074767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 41017698 - 41017776
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    ||||||||||||||  | ||| ||||| ||||||||||||| ||||| | |||||| | |||||||  |||||||||||||    
T  41017698 aaataaagtcaaaccattttcctataagctataagttgttttcataagtcatcatggaaagcttat--aaataagctgaaa 41017776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 41277456 - 41277403
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||| ||||||||||||||||| |||||||||  || ||||||||| |||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataa 41277403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 3970786 - 3970694
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||||| |||||||||||| |||  ||| ||||||||| ||| |  || |||||  |||  || |||||||||| ||||||||||||||||||    
T  3970786 aaagataaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaataagctgaaaatagc 3970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 8985633 - 8985713
Alignment:
Q  57 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||||| | |||||||||| |  ||| | ||| |||||  |||| | ||||||||||||||| ||||||||||    
T  8985633 aataaagtcaaactattttcatataatttgcaagctattttcataagctatcctatagagcttatggaaagaagctgaaaa 8985713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 31688059 - 31688095
Alignment:
Q  105 tatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  31688059 tatcatgtagagcttatgaaaataagttgaaaatagc 31688095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 42583101 - 42583201
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||||||||||||||||||| ||| ||| ||| | |||   ||||| ||||| ||||||||||| || ||| |||||| |  ||||||||||    
T  42583101 atttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaaa 42583200  T
Q  137 a 137  Q
    |    
T  42583201 a 42583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 30013179 - 30013273
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    ||||||| | |||| |||||||||||| | ||||||| ||||||| ||||| |||||  |||| |||||| || |||||||||||||||||||||    
T  30013179 acaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatag 30013273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 26284894 - 26284813
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||||| |||||||||  || ||||||||| | ||| ||||| |||| |||||||| ||||||||||||||    
T  26284894 aaataaagtcaaactgttttcatataaagtacaagttgttttcgtaagttatcctgtatagcttatgaaaataagctgaaaa 26284813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 11795049 - 11795144
Alignment:
Q  42 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||| ||  |||||||||| ||||| |||||||||  |||||| || || |||||  ||| ||| |||||||||||||||||||||||||    
T  11795049 tatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaa 11795144  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 6509408 - 6509318
Alignment:
Q  50 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    ||||| ||||||||||||| ||| || |||||| ||||||| ||||| |||||  |||| || ||||||||| |||||||| |||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatag 6509318  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 41336764 - 41336663
Alignment:
Q  36 catttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 135  Q
    ||||| ||||||||||||| ||||| ||||||| ||| ||||||||| ||| || |||||| |||||  ||||  | |||||||  ||||||||||||||    
T  41336764 catttttatgacaaaagataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaa 41336665  T
Q  136 aa 137  Q
    ||    
T  41336664 aa 41336663  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 7645955 - 7646030
Alignment:
Q  62 agtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| ||| ||||| ||| ||||||||||||| |||||  || | |||| |||||||||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaa 7646030  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 31862454 - 31862545
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| | ||||||||||||| |  || ||||| ||||||| ||||| ||||| ||||| |  |||||||||| ||||||||||||||    
T  31862454 acaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaa 31862545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 7918844 - 7918791
Alignment:
Q  84 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| |||||  |||| |||||||||| |||||||||||||||||    
T  7918844 ctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaa 7918791  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 10383856 - 10383933
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctg 133  Q
    ||||||| |||| |||| ||| ||||||||||| | ||||| | |||  |||||| ||||||||||||||||||||||    
T  10383856 aaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaataagctg 10383933  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 29973052 - 29973133
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||| | |||| |||| ||||||||||||| |||||  |||| |  |||| |||||||||||| |||||||    
T  29973052 aaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaa 29973133  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 34551073 - 34551166
Alignment:
Q  38 tttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 131  Q
    ||||||| ||||||||| | || |||||||| ||| ||||| |||  |||||||||||| | ||| ||||| || |||||||||| ||||||||    
T  34551073 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 34551166  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 37776802 - 37776725
Alignment:
Q  57 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 134  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||| |   ||| || |||| |||||||||||||||||    
T  37776802 aataaagtcaaattgtgtttatataaactataagttgtttacatcagcaatcttgaagagtttatggaaataagctga 37776725  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 39561640 - 39561559
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||| |  ||| ||||| ||| ||||||||||||| | |||  ||||||| | |||||||||||||||||||||||    
T  39561640 aaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagctgaaaa 39561559  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 12361156 - 12361244
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||| |||| |||||||| ||| ||||||||| ||||||| ||||| ||||| ||||   | |||||| ||||||||||| ||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaa 12361244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 34770853 - 34770909
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    ||||||||| ||||||||||||| ||| ||||| ||| ||||||||||||| |||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataa 34770909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 43704473 - 43704394
Alignment:
Q  60 aaagtcaaactgtgttcatataatctataagttgtttgcata--atttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  | ||||| |  | |||||||||||||||||| ||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaataagcttaaaa 43704394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 10460579 - 10460646
Alignment:
Q  61 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 128  Q
    |||||||||| | |||||| || |||||||| |||| |||||  |||||||||||||||| |||||||    
T  10460579 aagtcaaactattttcatacaagctataagtggttttcataagctatcatgtagagcttacggaaata 10460646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 11183506 - 11183597
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| |||| ||| |||||||||||||  |||||| | ||||||| ||||| || ||  || | || |||||||||||||||||||||||||    
T  11183506 acaacagataaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaa 11183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 35298587 - 35298492
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttca-tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 140  Q
    ||||||||| |||||||| ||||| || |||| ||||| ||||||||||||| |||||  |||||||  |||| ||   |||||||||||||||||    
T  35298587 acaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatcatggtgagcctacataaataagctgaaaatag 35298492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 41620400 - 41620309
Alignment:
Q  46 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||| ||||||||||||| | |||||||||| |||| ||| |||||  ||||  |||| ||| |||||| || |||||||| |||||    
T  41620400 acaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaataagcggaaaa 41620309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 42215410 - 42215324
Alignment:
Q  51 agatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| ||||||||||||||||| ||  ||||||||||||  | ||| ||||   |||| || |||||||||| ||||||||||||||    
T  42215410 agataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaa 42215324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 6864558 - 6864477
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||||||||||| | ||||| |||  |||||||||||| |||||  |||  || |||||||  ||||||||||||||||    
T  6864558 aaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 27028830 - 27028887
Alignment:
Q  84 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 141  Q
    ||||||| ||||| |||||  |||| || |||||||||| ||||||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagc 27028887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 28769438 - 28769357
Alignment:
Q  56 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||| |||||||||| | ||| ||||| ||||||| ||||| |||||  |||  || |||| ||||||||||||||||||||    
T  28769438 aaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaa 28769357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 38561678 - 38561743
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 102  Q
    |||||||| ||||||||| ||||||||||||||| | || || ||  ||||||||||||| |||||    
T  38561678 atttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgttttcataa 38561743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 7646234 - 7646262
Alignment:
Q  113 agagcttatggaaataagctgaaaatagc 141  Q
    |||||||||||||||||||||||||||||    
T  7646234 agagcttatggaaataagctgaaaatagc 7646262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 9956884 - 9956832
Alignment:
Q  85 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||||||| |||||| |||| || ||| |||||| ||||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 34788545 - 34788493
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataa 89  Q
    |||| |||||| |||||| ||||||||||||||||| | ||||||| ||||||    
T  34788545 atttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 39881802 - 39881770
Alignment:
Q  105 tatcatgtagagcttatggaaataagctgaaaa 137  Q
    ||||||| |||||||||||||||||||||||||    
T  39881802 tatcatggagagcttatggaaataagctgaaaa 39881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 27528 - 27628
Alignment:
Q  37 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 136  Q
    |||| ||| ||| ||||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||  |||| ||   ||| | ||||||||||||||||    
T  27528 atttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaaa 27627  T
Q  137 a 137  Q
    |    
T  27628 a 27628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 20143 - 20210
Alignment:
Q  49 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagag 116  Q
    |||||| |||||||||||||| ||  |||||||| |||| |||||||| ||||| |||| ||||||||    
T  20143 aaagataaaataaagtcaaacagttatcatataagctattagttgttttcataagttattatgtagag 20210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 160080 - 159991
Alignment:
Q  47 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 137  Q
    |||||||| ||||||||||||||||  | |||||||  |||||| ||||| |||||  |||| |  ||||||| |||||||||||||||||    
T  160080 caaaagataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaa 159991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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