View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_low_115 (Length: 281)
Name: NF2519_low_115
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_low_115 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 56276095 - 56275850
Alignment:
| Q |
13 |
aatataagttggtgagataagtttttaccaaatatctccaatcaagtcaaataagtgtataacttgtcgtgtatagtcttctcgttcttgagatttcgtg |
112 |
Q |
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| T |
56276095 |
aatataagttggtgagataagtttttaccaaatatctccaatcaagtcaaataagtgtataacttgtcgtgtatagtcttctcgttcttgagatttcgtg |
56275996 |
T |
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| Q |
113 |
tgctttgtgaactagagtaggttgttacagatattaaattcattttctagagagtttgttttatgacttgtacgtaccaaattataactttacaaaaaac |
212 |
Q |
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||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56275995 |
tgctttgtgaactagagtaggttgttatagatattaaattaattttctagagagtttgttttatgacttgtacgtaccaaattataactttacaaaaaac |
56275896 |
T |
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| Q |
213 |
tatatcctttcttttgaatacactaacaaactcctatcatgttacg |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56275895 |
tatatcctttcttttgaatacactaacaaactcctatcatgttacg |
56275850 |
T |
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