View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_low_151 (Length: 248)
Name: NF2519_low_151
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_low_151 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 47316217 - 47315997
Alignment:
| Q |
9 |
gtgagatgaagaggagcaagaggtgcacccaaaacactaagcagcaacctcaaatcagaagatgaggaaacaccgaagctacattctgtttcctctggtc |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47316217 |
gtgacatgaagaggagcaagaggtgcacccaaaacactaagcagcaacctcaaatcagaagatgaggaaacaccgaagctacattctgtttcctctggtc |
47316118 |
T |
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| Q |
109 |
cctccctcaacggcgacattgcttccaacggtggcctcaccggagtagaagggcatattcctccaacaaacaactcaagtggaagaacatcctctttctt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47316117 |
cctccctcaacggcgacattgcttccaacggtggcctcaccggagtagaagggcatattcctccaacaaacaactcaagtggaagaacatcctctttctt |
47316018 |
T |
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| Q |
209 |
cttccgctggagtaaacttga |
229 |
Q |
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||||||||||||||||||||| |
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| T |
47316017 |
cttccgctggagtaaacttga |
47315997 |
T |
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