View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2519_low_152 (Length: 248)
Name: NF2519_low_152
Description: NF2519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2519_low_152 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 456632 - 456861
Alignment:
| Q |
19 |
gaaacgtcccaagtcaacgctagagacaatatttccgtcgttaaggttgactctagggtcaatcttgtcgacggcaaagtacctatttgtgtaacgaacg |
118 |
Q |
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| T |
456632 |
gaaacgtcccaagtcaacgctagagacaatatttccgtcgttaaggttgactctagggtcaatcttgtcgacggcaaagtacctatttgtgtaatgaacc |
456731 |
T |
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| Q |
119 |
aagcactcgtcgtaccagatgagtgcttcggtttggtttggacaatgctgtcttatctctttgattgcagttgtgagacactggttacatacggtggtgg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
456732 |
aagcactcgtcgtaccagatgagtgcttcggtttggtttggacaatgctgtcttatctctttgattgcagttgtgagacactggttacatacggtggtgg |
456831 |
T |
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| Q |
219 |
cgacgtcgccacgacataggaagagtccac |
248 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
456832 |
cgacgtcgccacgacataggaagagtccac |
456861 |
T |
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