View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2520_high_16 (Length: 247)
Name: NF2520_high_16
Description: NF2520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2520_high_16 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 6970764 - 6971001
Alignment:
| Q |
10 |
aatatttggaaaatactggatcaaaatgggataaaaaagtgcagggcaattagcttcattgaaattgatggctgttgttatcaatttatggtggatgata |
109 |
Q |
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| T |
6970764 |
aatatttggaaaatactggatcaaaatgggataaaaaagtgcagggcaattagcttcattgaaattgatggctgttgttatcaatttatggtggatgata |
6970863 |
T |
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| Q |
110 |
aaacacatggagcttcaacaagtatatactctatgctgggtcaattaatggatcatctaaagtctgcggggtatccatgtaaacatttggatgtagagga |
209 |
Q |
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| T |
6970864 |
aaagacatggagcttcaacaagtatatactctatgctgggtcaattaatggatcatctaaagtctgcggggtatccatgtaaacatttggatgtagagga |
6970963 |
T |
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| Q |
210 |
aatatactgctcttatatttaattcagcataaagtttt |
247 |
Q |
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| T |
6970964 |
aatatactgctcttatatttaattcagcataaagtttt |
6971001 |
T |
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