View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2520_high_7 (Length: 425)
Name: NF2520_high_7
Description: NF2520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2520_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 66 - 425
Target Start/End: Complemental strand, 565323 - 564964
Alignment:
| Q |
66 |
ataaactctaaactactgagcttagaacatggtacggtattgattcaatgactaatgatatggttattgtaaaaattgacatattaattaagagtcataa |
165 |
Q |
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| T |
565323 |
ataaactctaaactactgagcttagaacatggtacggtattgattcaatgactaatgatatgcttattgtaaaaattgacatattaattaagagtcatga |
565224 |
T |
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| Q |
166 |
gtatgtttaattagtaaaggcatgcaagaagaagaaactctcataggtaaattttcttttaatagttggagtagtatcttctctatcaaagattacaata |
265 |
Q |
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| T |
565223 |
gtatgtttaattagtaaaggcatgcaagaagaagaaactctcataggtaaattttcttttaatagctggagtagtatcttctctatcaaagattacaata |
565124 |
T |
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| Q |
266 |
ataagagaaagacaaagaggacaaaattcttgaaaagatcaagagtgaatcatggatccaattaaggattcttaaatcgctcacaacaaaaattaatggt |
365 |
Q |
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| T |
565123 |
ataagagaaagacaaagaggacaaaattcttgaaaagatcaagagtgaatcgtggatccaattaaggattcttaaatcgctcacaacaagaattaatggt |
565024 |
T |
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| Q |
366 |
attgtatattatatactatcaaggagtgtaaattactcttgtttacactatcatatgtac |
425 |
Q |
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| T |
565023 |
attgtatattatatactatcatggagtgtaaattactcttgtttacactatcatatgtac |
564964 |
T |
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