View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2520_low_14 (Length: 272)
Name: NF2520_low_14
Description: NF2520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2520_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 28690892 - 28691151
Alignment:
| Q |
1 |
caccagtgatataagtgaacttggtgacaccattacaggtaacaataattctatatatcatctaaggattgatacaatttttattagtactttcacttaa |
100 |
Q |
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| T |
28690892 |
caccagtgatataagtgaacttggtgacaccattacaggtaacaataattctatatatcatctaaggattgatacaatttttattagtactttcacttaa |
28690991 |
T |
|
| Q |
101 |
tgtgatttattgatgaatactttgtttcattgaccagctaaggattcacacacattcctcatcaattggtttaaaagatttcctcaatttaaatcacatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
28690992 |
tgtgatttattgatgaatactttgtttcattgaccagctaaggattcacacacattcctcatcaattggtttaaaagatttcctcaattcaaatcacatg |
28691091 |
T |
|
| Q |
201 |
atttctacattgctggtgaaagctatgcaggtatatttaacttgtaaaataattttaata |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28691092 |
atttctacattgctggtgaaagctatgcaggtatatttaacttgtaaaataattttaata |
28691151 |
T |
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