View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2521_high_14 (Length: 287)
Name: NF2521_high_14
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2521_high_14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 48308791 - 48309067
Alignment:
| Q |
11 |
atatcttagtagtataaactaaagagacaacaaattaacaatcaaaggtctatctatcagaagtaaacagcagccaaggattatccaattctagtattgt |
110 |
Q |
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| T |
48308791 |
atatcttagtactataaactaaagagacaacaaattaacaatcaagggtctatctatcagaagtaaacagcagccaaggattatccaattctagtattgt |
48308890 |
T |
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| Q |
111 |
ccatatattgaaaaaagttgcacggaggaagaccaataatcacctatgcctcaaaaagaatatcagcaagacactgtactttataaactgcatctacgaa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
48308891 |
ccatatattgaaaaaagttgcacggaggaagaccaataatcacctatgcctcaaaaagaatatcagcaagacactgtactttataaactgcatctatgaa |
48308990 |
T |
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| Q |
211 |
ttgaatcttgaatttcaaagaaatcatttattccaggataaatttcaaacaatgaattaaatttttaaaccaatttt |
287 |
Q |
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| T |
48308991 |
ttgaatcttgaatttcaaagaaatcatttattccaggataaatttcaaacaatgaattaaatttttaaaccaatttt |
48309067 |
T |
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