View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2521_high_21 (Length: 250)
Name: NF2521_high_21
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2521_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44067042 - 44067283
Alignment:
| Q |
1 |
ctttatacatattttaaaaatacgcaaaatacaatggacactgcgcgtatttgaacattaataattttgatgtcgagannnnnnnncccaactcttatta |
100 |
Q |
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| T |
44067042 |
ctttatacatattttaaaaatacgcaaaatacaatggacactgcgcgtatttgaacattaataattttgatgtcaagatattttttcccaactcttatta |
44067141 |
T |
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| Q |
101 |
ctatttttgtnnnnnnnnn--tcagattggaaagattgaacattggaacattaacagggaaggccaagatagttggaacattattgggaattagtggagc |
198 |
Q |
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| T |
44067142 |
ctatttttgtaaaaaaaaaattcagattggaaagattgaacattggaacattaacagggaaggccaagatagttggaacattattgggaattagtggagc |
44067241 |
T |
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| Q |
199 |
aatgattctcacattctataaaagtattgagattcacctatg |
240 |
Q |
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| T |
44067242 |
aatgattctcacattctataaaagtattgagattcacctatg |
44067283 |
T |
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