View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2521_low_19 (Length: 277)
Name: NF2521_low_19
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2521_low_19 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 277
Target Start/End: Original strand, 16067804 - 16068082
Alignment:
| Q |
8 |
aacaaaatgtgcaaattagacttagataggtcgatatttcactagtcaaacccactagctagcatgttttatatattagttcatta---------aagtt |
98 |
Q |
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| T |
16067804 |
aacaaaatgtgcaaatttgacttagataggtcgatatttcactagtcaaacccactagctagcatgttttatatattagttcattataaagaattaagtt |
16067903 |
T |
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| Q |
99 |
aatctatactctaaccatatgcaattgttagtacttatgatcttattttacttatctctatactctattgattatttattctaattcatagtttgattca |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
16067904 |
aatctatactctaaccatatgcaattgttagtacttatgatcttattttacttatctctatactctattgattatttattctaattcttagtttgattca |
16068003 |
T |
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| Q |
199 |
acttagctctttatttattgtgtcaaatggtcatgcatgttttaacctattaagaatgttggcgtacccatcatttctc |
277 |
Q |
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| T |
16068004 |
aattagctctttatttattgtgtcaaatggtcatgcatgttttaacctattaagaatgttggcgtacccatcatttctc |
16068082 |
T |
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