View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2521_low_20 (Length: 265)
Name: NF2521_low_20
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2521_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 44468054 - 44468289
Alignment:
| Q |
19 |
taaatatgatccagaaagaatggatgatgaagttatggtttgaaggggtagggatgatgtgtatgcatatttttgatgaaaatgagagctgtaaggtgtc |
118 |
Q |
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| T |
44468054 |
taaatatgatccagaaagaatggatgatgaagttatggtttgaaggggtagggatgatgtgtatgcatatttttgatgaaaatgagagctgtaaggtgtc |
44468153 |
T |
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| Q |
119 |
tctattaatgtgtggatctgttgttgggtatggaaagactgagtaaaagtggagagaggacaaatgttgggatgaggttattttcagaagtgattctgtt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
44468154 |
tctattaatgtgtggatctgttgttgggtatggaaagactgagtaaaagtggagagaggacaaatgttgggatgaggttattttcaaaagtgattctgtt |
44468253 |
T |
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| Q |
219 |
agagactcctaagttttagggttgccatattcttcg |
254 |
Q |
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|||||||||||||||||||||||||||||| ||||| |
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| T |
44468254 |
agagactcctaagttttagggttgccatatgcttcg |
44468289 |
T |
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