View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2521_low_21 (Length: 264)
Name: NF2521_low_21
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2521_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 40652114 - 40652367
Alignment:
| Q |
1 |
tcctccaatcccgattaactctccgatcatttttattatttccccttttggtgagttttcatataatcttttgaatttgtttcaatcatgcatgttttca |
100 |
Q |
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| T |
40652114 |
tcctccaatcccgattaactctccgatcatttttattatttccccttttggtgagttt-catataatcttttgaatttgtttcaatcatgcatgttttca |
40652212 |
T |
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| Q |
101 |
ttactctaacatttgatttgtattcagctatagtactcaataacaaagttaacgcaaaatgtctcgaaagagtggttcgttctcaactagccctactcgc |
200 |
Q |
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| T |
40652213 |
ttactctaacatttgatttgtattcagctatagtactcaataacaaagttaacgcaaaatgtctcgaaagagtggttcgttctcaactagccctactcgc |
40652312 |
T |
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| Q |
201 |
tcaaggaataagacaactgggttttcccctcctcctagaccatttcatcctatgc |
255 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40652313 |
tcaaggaataagacaactgggttttcacctcctcctagaccatttcatcctatgc |
40652367 |
T |
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