View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2521_low_7 (Length: 437)

Name: NF2521_low_7
Description: NF2521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2521_low_7
NF2521_low_7
[»] chr3 (17 HSPs)
chr3 (225-428)||(20795295-20795498)
chr3 (225-428)||(30160446-30160649)
chr3 (247-377)||(5750601-5750733)
chr3 (247-377)||(5787560-5787692)
chr3 (258-376)||(37197829-37197946)
chr3 (258-377)||(6445165-6445282)
chr3 (258-376)||(20919268-20919385)
chr3 (258-376)||(20928230-20928347)
chr3 (318-430)||(37187502-37187612)
chr3 (392-426)||(2765973-2766007)
chr3 (332-426)||(9270699-9270792)
chr3 (392-426)||(50246546-50246580)
chr3 (245-310)||(2766088-2766153)
chr3 (179-211)||(10027340-10027372)
chr3 (179-211)||(42392259-42392291)
chr3 (179-212)||(36144377-36144410)
chr3 (183-211)||(22505412-22505440)
[»] chr6 (19 HSPs)
chr6 (185-428)||(21992555-21992799)
chr6 (253-377)||(33452320-33452444)
chr6 (253-377)||(13705495-13705617)
chr6 (253-325)||(15654083-15654155)
chr6 (253-325)||(15664036-15664108)
chr6 (258-376)||(4856915-4857034)
chr6 (258-377)||(30890054-30890175)
chr6 (258-426)||(11550248-11550417)
chr6 (331-428)||(4749520-4749617)
chr6 (253-426)||(27434709-27434881)
chr6 (323-369)||(15654187-15654233)
chr6 (329-369)||(15664142-15664182)
chr6 (392-428)||(33452249-33452285)
chr6 (179-210)||(4749243-4749274)
chr6 (392-426)||(32681527-32681561)
chr6 (179-208)||(27428653-27428682)
chr6 (258-286)||(1608073-1608101)
chr6 (396-428)||(13705427-13705459)
chr6 (179-211)||(15888574-15888606)
[»] scaffold0490 (1 HSPs)
scaffold0490 (179-428)||(9080-9330)
[»] scaffold0504 (1 HSPs)
scaffold0504 (19-180)||(9283-9444)
[»] chr1 (15 HSPs)
chr1 (242-428)||(19095344-19095530)
chr1 (307-428)||(8313968-8314088)
chr1 (247-426)||(45914958-45915138)
chr1 (253-426)||(46514368-46514540)
chr1 (258-327)||(8106928-8106997)
chr1 (258-327)||(8111574-8111643)
chr1 (258-310)||(15535296-15535348)
chr1 (247-426)||(22544110-22544288)
chr1 (330-376)||(3417383-3417429)
chr1 (178-212)||(41322437-41322471)
chr1 (258-327)||(8314029-8314098)
chr1 (179-212)||(16995447-16995480)
chr1 (392-426)||(15535181-15535215)
chr1 (183-212)||(40700108-40700137)
chr1 (392-428)||(11440957-11440993)
[»] chr7 (6 HSPs)
chr7 (49-180)||(12024979-12025110)
chr7 (245-426)||(7946432-7946613)
chr7 (259-376)||(29493987-29494104)
chr7 (392-426)||(29494118-29494152)
chr7 (334-375)||(30878825-30878866)
chr7 (184-212)||(48553313-48553341)
[»] chr8 (52 HSPs)
chr8 (253-377)||(15605962-15606086)
chr8 (253-377)||(15614315-15614439)
chr8 (253-377)||(15648131-15648255)
chr8 (258-377)||(10894547-10894666)
chr8 (253-377)||(15624343-15624467)
chr8 (258-372)||(15624165-15624279)
chr8 (253-371)||(15637492-15637610)
chr8 (258-372)||(15647953-15648067)
chr8 (253-377)||(15637302-15637426)
chr8 (253-371)||(15637676-15637794)
chr8 (253-372)||(15613808-15613928)
chr8 (253-377)||(15637119-15637243)
chr8 (258-377)||(16250411-16250529)
chr8 (253-372)||(15636942-15637060)
chr8 (258-364)||(20540820-20540926)
chr8 (261-372)||(15605455-15605567)
chr8 (253-377)||(15614133-15614256)
chr8 (225-327)||(38050219-38050321)
chr8 (253-346)||(15605628-15605721)
chr8 (253-377)||(15605780-15605903)
chr8 (253-346)||(15613981-15614073)
chr8 (306-377)||(15624526-15624597)
chr8 (253-382)||(10895864-10895992)
chr8 (304-377)||(15613469-15613541)
chr8 (274-428)||(287343-287496)
chr8 (253-312)||(15605343-15605402)
chr8 (306-377)||(15648314-15648385)
chr8 (304-377)||(15923611-15923684)
chr8 (304-377)||(15605117-15605188)
chr8 (258-375)||(25113397-25113514)
chr8 (253-312)||(15613696-15613755)
chr8 (258-377)||(17895021-17895138)
chr8 (335-377)||(4930230-4930272)
chr8 (247-426)||(18666790-18666969)
chr8 (258-327)||(23136464-23136533)
chr8 (332-372)||(15923951-15923991)
chr8 (258-428)||(27521102-27521272)
chr8 (253-312)||(15923839-15923898)
chr8 (247-423)||(8362304-8362480)
chr8 (330-375)||(12167179-12167224)
chr8 (330-375)||(12411607-12411652)
chr8 (258-310)||(35136706-35136758)
chr8 (258-348)||(772597-772688)
chr8 (253-312)||(15636830-15636889)
chr8 (177-212)||(19190675-19190710)
chr8 (247-310)||(23689219-23689282)
chr8 (253-426)||(45250949-45251121)
chr8 (330-375)||(16291992-16292037)
chr8 (392-427)||(4930305-4930340)
chr8 (392-426)||(23689104-23689138)
chr8 (259-376)||(23161056-23161172)
chr8 (258-287)||(25063975-25064004)
[»] scaffold0114 (1 HSPs)
scaffold0114 (258-377)||(34291-34410)
[»] chr4 (16 HSPs)
chr4 (253-377)||(37069683-37069805)
chr4 (258-374)||(17461926-17462041)
chr4 (258-428)||(24024-24193)
chr4 (313-428)||(13914684-13914798)
chr4 (335-377)||(13923288-13923330)
chr4 (253-426)||(18066676-18066848)
chr4 (258-426)||(35647971-35648138)
chr4 (332-382)||(14288140-14288190)
chr4 (392-428)||(37069615-37069651)
chr4 (392-427)||(13923218-13923253)
chr4 (179-210)||(55057980-55058011)
chr4 (392-426)||(10780389-10780423)
chr4 (392-426)||(10973998-10974032)
chr4 (177-211)||(13924614-13924648)
chr4 (179-208)||(17990085-17990114)
chr4 (179-208)||(18072875-18072904)
[»] chr5 (7 HSPs)
chr5 (258-377)||(501100-501220)
chr5 (258-377)||(36647960-36648079)
chr5 (247-426)||(27588612-27588791)
chr5 (258-327)||(9663066-9663135)
chr5 (330-428)||(19205849-19205946)
chr5 (330-375)||(29857767-29857812)
chr5 (392-428)||(501252-501288)
[»] chr2 (12 HSPs)
chr2 (253-347)||(11127769-11127864)
chr2 (285-428)||(45049526-45049668)
chr2 (247-426)||(21119845-21120024)
chr2 (248-310)||(20103500-20103562)
chr2 (330-375)||(5243259-5243304)
chr2 (179-211)||(5244826-5244858)
chr2 (394-426)||(24972140-24972172)
chr2 (247-299)||(24972272-24972324)
chr2 (258-310)||(41747366-41747418)
chr2 (392-426)||(20103644-20103678)
chr2 (285-323)||(31300006-31300044)
chr2 (184-212)||(14876037-14876065)
[»] scaffold0018 (1 HSPs)
scaffold0018 (262-428)||(67189-67354)
[»] scaffold0022 (1 HSPs)
scaffold0022 (258-428)||(101102-101272)
[»] scaffold0155 (2 HSPs)
scaffold0155 (247-376)||(26657-26786)
scaffold0155 (395-426)||(26805-26836)
[»] scaffold0003 (2 HSPs)
scaffold0003 (253-426)||(52482-52654)
scaffold0003 (179-208)||(58681-58710)
[»] scaffold0289 (1 HSPs)
scaffold0289 (253-426)||(22068-22239)
[»] scaffold0059 (2 HSPs)
scaffold0059 (258-376)||(67185-67302)
scaffold0059 (258-376)||(75290-75407)
[»] scaffold0191 (1 HSPs)
scaffold0191 (259-382)||(17020-17139)
[»] scaffold0061 (1 HSPs)
scaffold0061 (181-212)||(30978-31009)
[»] scaffold0017 (1 HSPs)
scaffold0017 (181-212)||(167783-167814)
[»] scaffold0200 (1 HSPs)
scaffold0200 (183-211)||(3119-3147)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 4e-88; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 225 - 428
Target Start/End: Complemental strand, 20795498 - 20795295
Alignment:
Q  225 aaaggacacgtggcaagcttatattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataa 324  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20795498 aaagtacacgtggcaagcttatattctccatcccatttaatgttttcatatcatccaatcaaaatggattatgacacatttattttatatcaaccaataa 20795399  T
Q  325 aaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  20795398 aaagaggatcatgactcatttgtttttcatgagccaatcaaaatgaatcatgatatgatttttttttctatatatagacaatttgtttttcattattttc 20795299  T
Q  425 atct 428  Q
    ||||    
T  20795298 atct 20795295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 225 - 428
Target Start/End: Original strand, 30160446 - 30160649
Alignment:
Q  225 aaaggacacgtggcaagcttatattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataa 324  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30160446 aaagtacacgtggcaagcttatattctccatctcatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataa 30160545  T
Q  325 aaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||||||||||||||    
T  30160546 aaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgatttttttttctatatatagacaatttatttttcattattttc 30160645  T
Q  425 atct 428  Q
    ||||    
T  30160646 atct 30160649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 247 - 377
Target Start/End: Complemental strand, 5750733 - 5750601
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat-aaaaagaggatcatgactcattt 345  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||    
T  5750733 attccccatctcatctaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccagtaaaaaaaaggatgatgactcattt 5750634  T
Q  346 g-tttttcatgagccaatcaaaatggatcatga 377  Q
    | |||||||||||||||||||||||||||||||    
T  5750633 gctttttcatgagccaatcaaaatggatcatga 5750601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 247 - 377
Target Start/End: Complemental strand, 5787692 - 5787560
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat-aaaaagaggatcatgactcattt 345  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||    
T  5787692 attccccatctcatctaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccagtaaaaaaaaggatgatgactcattt 5787593  T
Q  346 g-tttttcatgagccaatcaaaatggatcatga 377  Q
    | |||||||||||||||||||||||||||||||    
T  5787592 gctttttcatgagccaatcaaaatggatcatga 5787560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 37197829 - 37197946
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||| ||| ||||||| ||||  |  ||||||| |||||  ||||||| ||    
T  37197829 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattaaccaatcaaaa-tgattcatgacacatttagttttcatcag 37197927  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  37197928 ccaatcaaaattgatcatg 37197946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 6445282 - 6445165
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||| |||||| ||||||| ||||||| ||||| |||   |||| | | | ||||| ||||||| |||||||||||||| ||||| |||||    
T  6445282 catttaatgtttt-ttatcaaccaatcagaatggatcatgactcataatttttttcttagccaatcaaaagag-atcatgactcatttattttttatgag 6445185  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||| ||||||||    
T  6445184 ccaatcaaaattgatcatga 6445165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 20919268 - 20919385
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||| |||||||||||| || |||||||| |||||||||| ||| | ||||| ||||  |  ||||||| |||||  ||||||  ||    
T  20919268 catttaatgttttcttaccatccaatcaaattgaattatgactcatttattttttattagccaatcaaaa-tgattcatgacacatttagttttcaccag 20919366  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  20919367 ccaatcaaaattgatcatg 20919385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 20928230 - 20928347
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||| |||||||||||| || |||||||| |||||||||| ||| | ||||| ||||  |  ||||||| |||||  ||||||  ||    
T  20928230 catttaatgttttcttaccatccaatcaaattgaattatgactcatttattttttattagccaatcaaaa-tgattcatgacacatttagttttcaccag 20928328  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  20928329 ccaatcaaaattgatcatg 20928347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 37187502 - 37187612
Alignment:
Q  318 ccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcat 417  Q
    ||||| ||||||| |||| ||||||||| ||||| |||||||||||||||| |||||||| ||||         ||||||||| |||||||| |||||||    
T  37187502 ccaatcaaaagag-atcacgactcatttattttttatgagccaatcaaaattgatcatgacatgatttttttttctatatataaacaatttg-ttttcat 37187599  T
Q  418 tattttcatctca 430  Q
    ||| |||||||||    
T  37187600 tatcttcatctca 37187612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 2766007 - 2765973
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||||||||||||||||||||||||||||    
T  2766007 ctatatatagacaatttgtttttcattattttcat 2765973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 9270792 - 9270699
Alignment:
Q  332 atcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| ||||         |||||||||||||| ||| ||||||||||||||||    
T  9270792 atcatgactcatttatttttcattagccaattaaaattgatcatgacatga-tttttttcctatatatagacaacttgcttttcattattttcat 9270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 50246580 - 50246546
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||||||||||||||||||||||||||||    
T  50246580 ctatatatagacaatttgtttttcattattttcat 50246546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 2766153 - 2766088
Alignment:
Q  245 atattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    ||||||| |||| |||||||||||||||||||||| ||||||| || |||| ||| |||| |||||    
T  2766153 atattcttcatctcatttaatgttttcttatcatctaatcaaattgaattacgactcattcatttt 2766088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 10027372 - 10027340
Alignment:
Q  179 atctttatctttatctttattatatatatttgc 211  Q
    |||||||||||||||||||||||||||||||||    
T  10027372 atctttatctttatctttattatatatatttgc 10027340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 42392259 - 42392291
Alignment:
Q  179 atctttatctttatctttattatatatatttgc 211  Q
    |||||||||||||||||||||||||||||||||    
T  42392259 atctttatctttatctttattatatatatttgc 42392291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 36144410 - 36144377
Alignment:
Q  179 atctttatctttatctttattatatatatttgcg 212  Q
    |||||||||||||||||||||||||| |||||||    
T  36144410 atctttatctttatctttattatatacatttgcg 36144377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 22505440 - 22505412
Alignment:
Q  183 ttatctttatctttattatatatatttgc 211  Q
    |||||||||||||||||||||||||||||    
T  22505440 ttatctttatctttattatatatatttgc 22505412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 7e-87; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 185 - 428
Target Start/End: Complemental strand, 21992799 - 21992555
Alignment:
Q  185 atctttatctttattatatatatttgcgttannnnnnnnnaaaggacacgtggcaagcttatattctccatcccatttaatgttttcttatcatccaatc 284  Q
    |||||||||||||||||||||||||||| ||         |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21992799 atctttatctttattatatatatttgcgctatttttttttaaagtacacgtggcaagcttatattctccatctcatttaatgttttcttatcatccaatc 21992700  T
Q  285 aaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatga-n 383  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      
T  21992699 aaaatggattatgacacatttattttatatcaaccaatcaaaagaggatcatgactcatttgtttttcttgagccaatcaaaatggatcatgatatgatt 21992600  T
Q  384 nnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
            |||||||||||||||||||||||||||||||||||||    
T  21992599 ttttttttctatatatagacaatttgtttttcattattttcatct 21992555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 33452444 - 33452320
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  33452444 catctcatttaatgttttcttatcatccaatcaaaatgaattatgaaacatttattttatatcaaccaataaaaaaaggattatgacacatttgtttttc 33452345  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||||    
T  33452344 atgagccaatcaaaatggatcatga 33452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 13705617 - 13705495
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  13705617 catctcatttaatgttttcttatcatccaatcaaaatgaatt--gaaacatttattttatatcaaccaataaaaaaaggattatgacacatttgtttttc 13705520  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||||    
T  13705519 atgagccaatcaaaatggatcatga 13705495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 15654083 - 15654155
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaa 325  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15654083 catctcatttaatactttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaa 15654155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 15664036 - 15664108
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaa 325  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15664036 catctcatttaatactttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaa 15664108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 4857034 - 4856915
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgt--ttttcatg 355  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||| ||| ||||||| ||||  |  ||||||| ||||| |  |||||||     
T  4857034 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattaaccaatcaaaa-tgattcatgacacatttatagttttcatc 4856936  T
Q  356 agccaatcaaaatggatcatg 376  Q
    ||||||||||||| |||||||    
T  4856935 agccaatcaaaattgatcatg 4856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 30890175 - 30890054
Alignment:
Q  258 catttaatgttttctt-atcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagag-gatcatgactcatttgtttttcatg 355  Q
    ||||||||||||| || |||||||||||||||| ||| ||||| ||| ||||||  | ||||||||||||| |  ||||||||||||||| |||| ||||    
T  30890175 catttaatgttttttttatcatccaatcaaaatagatcatgactcatatatttttcaacaaccaataaaaaaattgatcatgactcatttattttacatg 30890076  T
Q  356 agccaatcaaaatggatcatga 377  Q
    | ||||||||||| ||||||||    
T  30890075 atccaatcaaaattgatcatga 30890054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 426
Target Start/End: Original strand, 11550248 - 11550417
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgt--ttttcatg 355  Q
    |||||||||||||||||||||||||| ||| |  |||||||| |||||||||| ||| ||||||| ||||  |  ||||||| ||||| |  |||||||     
T  11550248 catttaatgttttcttatcatccaattaaattaaattatgactcatttattttttattaaccaatcaaaa-tgattcatgacacatttatagttttcatc 11550346  T
Q  356 agccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||||||| |||||||   |||         |||||||| |||||||||||||||||| |||||||    
T  11550347 agccaatcaaaattgatcatgtcttgatttttttccctatatattgacaatttgtttttcattgttttcat 11550417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 4749520 - 4749617
Alignment:
Q  331 gatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||| ||||          |||||||| ||||||||||||||||||| |||||||    
T  4749520 gatcatgactcatttattttttatgagccaatcaaaattgatcatgacatgatttttttctatatatataaacaatttgtttttcattatcttcatct 4749617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 27434709 - 27434881
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||| ||| || |||||||| |||||||||| ||| | ||||| || |  ||| ||||||||||||  |||||    
T  27434709 catctcatttaatgttttcttatcatccaattaaattgaattatgactcatttattttttattagccaatcaaga-tggaccatgactcatttagttttc 27434807  T
Q  353 atgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    |  | ||||||||||| ||| |    ||||         || ||||||||||||||||||||||||||||||||    
T  27434808 accaaccaatcaaaattgattacacaatgatttttgtctctgtatatagacaatttgtttttcattattttcat 27434881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 369
Target Start/End: Original strand, 15654187 - 15654233
Alignment:
Q  323 aaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatg 369  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  15654187 aaaaaaaggatcatgactcatttgtttttcatgttccaatcaaaatg 15654233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 15664142 - 15664182
Alignment:
Q  329 aggatcatgactcatttgtttttcatgagccaatcaaaatg 369  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  15664142 aggatcatgactcatttgtttttcatgttccaatcaaaatg 15664182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 33452285 - 33452249
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33452285 ctatatatagacaatttgtttttcatcattttcatct 33452249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 4749243 - 4749274
Alignment:
Q  179 atctttatctttatctttattatatatatttg 210  Q
    ||||||||||||||||||||||||||||||||    
T  4749243 atctttatctttatctttattatatatatttg 4749274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 32681527 - 32681561
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||||||||||| |||||||||||||||||    
T  32681527 ctatatatagacaatttatttttcattattttcat 32681561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 27428653 - 27428682
Alignment:
Q  179 atctttatctttatctttattatatatatt 208  Q
    ||||||||||||||||||||||||||||||    
T  27428653 atctttatctttatctttattatatatatt 27428682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 286
Target Start/End: Complemental strand, 1608101 - 1608073
Alignment:
Q  258 catttaatgttttcttatcatccaatcaa 286  Q
    |||||||||||||||||||||||||||||    
T  1608101 catttaatgttttcttatcatccaatcaa 1608073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 13705459 - 13705427
Alignment:
Q  396 atatagacaatttgtttttcattattttcatct 428  Q
    |||||||||||||||||||||| ||||||||||    
T  13705459 atatagacaatttgtttttcatcattttcatct 13705427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 15888606 - 15888574
Alignment:
Q  179 atctttatctttatctttattatatatatttgc 211  Q
    |||| ||||||||||||||||||||||||||||    
T  15888606 atctctatctttatctttattatatatatttgc 15888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 179 - 428
Target Start/End: Original strand, 9080 - 9330
Alignment:
Q  179 atctttatctttatctttattatatatatttgcgttannnnnnnnnaaagg-acacgtggcaagcttatattctccatcccatttaatgttttcttatca 277  Q
    |||||||||||||||||||||||||||||||| | ||         ||| | |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  9080 atctttatctttatctttattatatatatttgtgctattttttttaaaaagtacacgtggtaagcttatattttccatcccatttaatgttttcttatca 9179  T
Q  278 tccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9180 tccaatcaaaatggattataacacatttattttatatcaaccaataaaaagaggatcatgactcatttatttttcatgagccaatcaaaatggatcatga 9279  T
Q  378 tatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||         |||||||||||||||||||||||||||||||||||||    
T  9280 tatgatttttttttctatatatagacaatttgtttttcattattttcatct 9330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 9283 - 9444
Alignment:
Q  19 acttctgttttgcttttgtggtcacacacccctaactaaagatataataatgtctagactctagatgaattctgtgcagtttataccttgcaaatctaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9283 acttctgttttgcttttgtggtcacacacccctaactaaagatataataatgtctagactctagatgaattctgtgcagtttataccttgcaaatctaaa 9382  T
Q  119 tttgactgtgagtacctttaggaccggtttggagatgtaataaagggattgatatgtgtaat 180  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  9383 tttgactgtgagtacctttatgaccggtttggagatgtaataaagtgattgacatgtgtaat 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 6e-78; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 242 - 428
Target Start/End: Original strand, 19095344 - 19095530
Alignment:
Q  242 cttatattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactc 341  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19095344 cttatattctccatcccatttaatgttttcttatcattcaataaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactc 19095443  T
Q  342 atttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||    
T  19095444 atttgtttttcatgagccaatcaaaatggatcacgatatgatttttttttctatatatagacaatttgtttttcattattttcatct 19095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 428
Target Start/End: Complemental strand, 8314088 - 8313968
Alignment:
Q  307 ttttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaat 406  Q
    |||| ||||||||||| |||| || |||||||||||||| ||||| || ||||||||||||| |||||||| ||||         ||||||||||||||     
T  8314088 ttttttatcaaccaatcaaaatag-atcatgactcatttattttttattagccaatcaaaattgatcatgacatgattttttttcctatatatagacaaa 8313990  T
Q  407 ttgtttttcattattttcatct 428  Q
    || |||||||||||||||||||    
T  8313989 ttatttttcattattttcatct 8313968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 247 - 426
Target Start/End: Original strand, 45914958 - 45915138
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat-atcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| |||||||||||||||||||||||||||||| || ||||||||  ||| ||||| | || | ||||| || |  | | ||||||||||||    
T  45914958 attcttcatctcatttaatgttttcttatcatccaatcaaattgaattatgacttattcatttttttattagccaattaagat-gaaccatgactcattt 45915056  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnc-tatatatagacaatttgtttttcattattttcat 426  Q
      ||||||| | |||||||||||||||||||   |||         | | ||||||||||||||||||||||||||||||||    
T  45915057 agttttcatcaaccaatcaaaatggatcatgccttgattttttttccctgtatatagacaatttgtttttcattattttcat 45915138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 46514368 - 46514540
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||| | |||| |||||||||||  || | ||| |||||| ||| |||  |||||| ||||  | || |||| |||||| ||||||    
T  46514368 catctcatttaatgttttttcatcaaccaatcaaaatatatcacgactcatttactttttatttaccaatcaaaa-tgaatgatgattcatttatttttc 46514466  T
Q  353 atgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    || ||||||| ||||| |||||||| ||||         |||||||||||||| ||| ||||||||||||||||    
T  46514467 attagccaattaaaattgatcatgacatgattttttcccctatatatagacaacttgcttttcattattttcat 46514540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 8106997 - 8106928
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaa 327  Q
    ||||||||||||  |||||||||||||||||| ||||||||| ||| ||||||| | |||||||| ||||    
T  8106997 catttaatgtttctttatcatccaatcaaaattgattatgactcatctattttacaacaaccaatcaaaa 8106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 8111643 - 8111574
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaa 327  Q
    ||||||||||||  |||||||||||||||||| ||||||||| ||| ||||||| | |||||||| ||||    
T  8111643 catttaatgtttctttatcatccaatcaaaattgattatgactcatctattttacaacaaccaatcaaaa 8111574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 15535348 - 15535296
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    |||||||||||||||||||||||||||||| || |||||||| |||| |||||    
T  15535348 catttaatgttttcttatcatccaatcaaattgaattatgactcattcatttt 15535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 426
Target Start/End: Complemental strand, 22544288 - 22544110
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| ||||||||| |||||||||||||||||||| || |||||||| |||| | |||| ||| | ||||| || |  | | ||||||||||||    
T  22544288 attcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttttttattagccaatcaaga-tgaaccatgactcattt 22544190  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
      ||||||| | ||||||||||| |||||||   |||         ||||||||| |||||||||||||||||||||||||    
T  22544189 agttttcatcaaccaatcaaaattgatcatgccttga-tttttttcctatatataaacaatttgtttttcattattttcat 22544110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 3417383 - 3417429
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcatg 376  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||    
T  3417383 ggatcatgactcatttatttttcatcagccaatcaaaattgatcatg 3417429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 41322437 - 41322471
Alignment:
Q  178 aatctttatctttatctttattatatatatttgcg 212  Q
    |||||||||||||||||||||||||||||||||||    
T  41322437 aatctttatctttatctttattatatatatttgcg 41322471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 8314098 - 8314029
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaa 327  Q
    ||||||||||||| |||||| ||||||||||| ||| ||||| |||||||||| ||| | ||||| ||||    
T  8314098 catttaatgtttttttatcaaccaatcaaaatagatcatgactcatttattttttattagccaatcaaaa 8314029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 16995447 - 16995480
Alignment:
Q  179 atctttatctttatctttattatatatatttgcg 212  Q
    ||||||||||||||||||||||||||||||||||    
T  16995447 atctttatctttatctttattatatatatttgcg 16995480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 15535215 - 15535181
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||| |||||||||||||||||||||||||    
T  15535215 ctatatataaacaatttgtttttcattattttcat 15535181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 40700108 - 40700137
Alignment:
Q  183 ttatctttatctttattatatatatttgcg 212  Q
    ||||||||||||||||||||||||||||||    
T  40700108 ttatctttatctttattatatatatttgcg 40700137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 11440957 - 11440993
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  11440957 ctatatataaacagtttgtttttcattattttcatct 11440993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 12025110 - 12024979
Alignment:
Q  49 cctaactaaagatataataatgtctagactctagatgaattctgtgcagtttataccttgcaaatctaaatttgactgtgagtacctttaggaccggttt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||    
T  12025110 cctaactaaagatataataatgtctagactctagatgaattctgtgcagtttataccttgcgaatcaaaatttgactgttggtacctttaggaccggttt 12025011  T
Q  149 ggagatgtaataaagggattgatatgtgtaat 180  Q
    ||| ||||||||||| ||||||||||||||||    
T  12025010 ggacatgtaataaagtgattgatatgtgtaat 12024979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 426
Target Start/End: Complemental strand, 7946613 - 7946432
Alignment:
Q  245 atattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcat 343  Q
    ||||||| |||| |||||||||||||||||||||||||||||| |  |||||||| |||| | |||| ||| | ||||| || |  | | ||||||||||    
T  7946613 atattcttcatctcatttaatgttttcttatcatccaatcaaattaaattatgactcattcatttttttattagccaatcaaga-tgaaccatgactcat 7946515  T
Q  344 ttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    ||  ||||||| | ||||||||||||||||||| | |||         |||||||||||||||||||||||||||||||||||    
T  7946514 ttagttttcatcaaccaatcaaaatggatcatgttttgatttttttccctatatatagacaatttgtttttcattattttcat 7946432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 29493987 - 29494104
Alignment:
Q  259 atttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||||| |||||||||||||||||||| || |||||||| |||| | |||| ||| | ||||| || |  | ||||||||||||||  ||||||| |     
T  29493987 atttaatgctttcttatcatccaatcaaattgaattatgactcattcatttttttattagccaatcaaga-tgaatcatgactcatttagttttcatcaa 29494085  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  29494086 ccaatcaaaattgatcatg 29494104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 29494118 - 29494152
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||||||||||||||||||||||||||||    
T  29494118 ctatatatagacaatttgtttttcattattttcat 29494152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 30878825 - 30878866
Alignment:
Q  334 catgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  30878825 catgactcaattgtttttcatgatccaatcaaaatagatcat 30878866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 48553313 - 48553341
Alignment:
Q  184 tatctttatctttattatatatatttgcg 212  Q
    |||||||||||||||||||||||||||||    
T  48553313 tatctttatctttattatatatatttgcg 48553341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15606086 - 15605962
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  15606086 catctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaaatgatcatgactcatttgtttttc 15605987  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||| ||||||||||||    
T  15605986 atgagccaatcataatggatcatga 15605962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15614439 - 15614315
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  15614439 catctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaaatgatcatgactcatttgtttttc 15614340  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||| ||||||||||||    
T  15614339 atgagccaatcataatggatcatga 15614315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15648255 - 15648131
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15648255 catctcatttaatgttttcttatcatccaatcaaaaaagattttgacacatttattttatatcaaccaatagaaaaaggatcatgactcatttgtttttc 15648156  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||||    
T  15648155 atgagccaatcaaaatggatcatga 15648131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 10894547 - 10894666
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||    
T  10894547 catttaatgttttcttatcatccaatcaaaattgattatgacacatttattttatatcaaccaataaaaaaatgattataactcatttgtttttcatgag 10894646  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||||||||||||    
T  10894647 ccaatcaaaatggatcatga 10894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15624467 - 15624343
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15624467 catctcatttaatgttttcttatcatccaatcaaaaaagattttgacacatttattttatatcaaccaatagaaaaaggatcatgactcatttgtttttc 15624368  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    || ||||||||||||||||||||||    
T  15624367 atcagccaatcaaaatggatcatga 15624343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 15624279 - 15624165
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15624279 catttaatgttttcttatcatccaatcaaaatggattttgacacgtttattttatatcaaccaataaaaataggatcatgactcatttgtttttaatgag 15624180  T
Q  358 ccaatcaaaatggat 372  Q
    ||||| |||||||||    
T  15624179 ccaattaaaatggat 15624165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 253 - 371
Target Start/End: Complemental strand, 15637610 - 15637492
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15637610 catctcatttaatgttttcctatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 15637511  T
Q  353 atgagccaatcaaaatgga 371  Q
    |||| ||||||| ||||||    
T  15637510 atgatccaatcataatgga 15637492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 15648067 - 15647953
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15648067 catttaatgttttcttatcatccaatcaaaatggattttggcacgtttattttatatcaaccaataaaaataggatcatgactcatttgtttttaatgag 15647968  T
Q  358 ccaatcaaaatggat 372  Q
    |||||||||||||||    
T  15647967 ccaatcaaaatggat 15647953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15637426 - 15637302
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  15637426 catctcatttaatgttttcctatcatccaatgacaatggattttgacacatttattttatatcaaccaataaaaaatggatcatgactcatttgtttttc 15637327  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||| ||||||||||||    
T  15637326 atgagccaatcataatggatcatga 15637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 253 - 371
Target Start/End: Complemental strand, 15637794 - 15637676
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15637794 catctcatttaatgttttcttaacatccaatcagaatgaattttgacacatttattttatatcaaccaataaaaaaaggatcatgactcatttgtttttc 15637695  T
Q  353 atgagccaatcaaaatgga 371  Q
    |||||||||||| ||||||    
T  15637694 atgagccaatcataatgga 15637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 15613928 - 15613808
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaata-aaaagaggatcatgactcatttgttttt 351  Q
    |||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  15613928 catctcatttaatgttttcttatcatccaatcggaatggattttgacacatttattttatatcaaccaataaaaaaaagcatcatgactcatttgttttt 15613829  T
Q  352 catgagccaatcaaaatggat 372  Q
    |||||||||||||||||||||    
T  15613828 catgagccaatcaaaatggat 15613808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15637243 - 15637119
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  15637243 catctcatttaatgttttcttatcattcaatcagaatggattttgacacatttattttatatcaaccaataaaaaaatgaccatgactcatttgtttttc 15637144  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||| ||| ||||||||    
T  15637143 atgagccaatcataatagatcatga 15637119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 16250411 - 16250529
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||| ||||||||| || |||||||||||    
T  16250411 catttaatgttttcttatcatccaatcaaaatagattatgacacatttgttttatatcaaccaatcaaaaaaggagcatgactca-ttatttttcatgag 16250509  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||||||||||||    
T  16250510 ccaatcaaaatggatcatga 16250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 15637060 - 15636942
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  15637060 catctcatttaat-ttttattatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaaaggatcatgactcatttgttttta 15636962  T
Q  353 atgagccaatcaaaatggat 372  Q
    ||||| ||||||||||||||    
T  15636961 atgagtcaatcaaaatggat 15636942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 20540926 - 20540820
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  20540926 catttaacgtttttttatcctccaatcaaaatggattatgacacatttattttatatcaaccaataaaaaaagaatcataactcatttgtttttcatgag 20540827  T
Q  358 ccaatca 364  Q
    |||||||    
T  20540826 ccaatca 20540820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 15605567 - 15605455
Alignment:
Q  261 ttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaata-aaaagaggatcatgactcatttgtttttcatgagcc 359  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||    
T  15605567 ttaatgttttcttatcatccaatcggaatggattttgacacatttattttatatcaaccaataaaaaaaaacatcatgactcatttgtttttcatgagcc 15605468  T
Q  360 aatcaaaatggat 372  Q
    |||||||||||||    
T  15605467 aatcaaaatggat 15605455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15614256 - 15614133
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||     
T  15614256 catctcatttaatgtttttttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaa-aagatcatgacccatttgtttttt 15614158  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||||| ||| ||||||||    
T  15614157 atgagccaatcataatagatcatga 15614133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 225 - 327
Target Start/End: Complemental strand, 38050321 - 38050219
Alignment:
Q  225 aaaggacacgtggcaagcttatattctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataa 324  Q
    |||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  38050321 aaagtacatgtggcaagcttatattctccatctcatttaatattttcttatcatccaatcaaaatggattatgacacatttattttatatcatccaatca 38050222  T
Q  325 aaa 327  Q
    |||    
T  38050221 aaa 38050219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 15605721 - 15605628
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttg 346  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15605721 catctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaaaggatcatgactcatttg 15605628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 15605903 - 15605780
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||     
T  15605903 catctcatttaatgtttttttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaa-aagatcatgacccatttgtttttt 15605805  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
    |||||||||| | ||| ||||||||    
T  15605804 atgagccaattataatagatcatga 15605780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 15614073 - 15613981
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttg 346  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15614073 catctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaa-aggatcatgactcatttg 15613981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 15624597 - 15624526
Alignment:
Q  306 attttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  15624597 attttatatcaaccaataaaaaaaggatcatgactcatttgttttttatgagccaatcataatggatcatga 15624526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 10895864 - 10895992
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||| |||||| |||||||| |||||| ||||| |||||||||| ||| |  |||| ||||  |||||||||||||||| ||||||    
T  10895864 catctcatttaatgtttttttatcaaccaatcaatatggatcatgactcatttattttttattagtcaatcaaaat-ggatcatgactcatttatttttc 10895962  T
Q  353 atgagccaatcaaaatggatcatgatatga 382  Q
    || ||||||||||||| |||||||| ||||    
T  10895963 attagccaatcaaaattgatcatgacatga 10895992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 15613541 - 15613469
Alignment:
Q  304 ttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  15613541 ttattttatatcaaccaataaaaaaag-atcatgactcatttttttttcatgagccaatcaaaatggatcatga 15613469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 274 - 428
Target Start/End: Original strand, 287343 - 287496
Alignment:
Q  274 atcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatc 373  Q
    |||| ||||||||||| ||| ||||| |||||||||| ||| | ||||| ||||  |||||||||||||||| ||||| || ||||||||||||| ||||    
T  287343 atcaaccaatcaaaatagatcatgactcatttattttttattagccaatcaaaat-ggatcatgactcatttattttttattagccaatcaaaattgatc 287441  T
Q  374 atgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    |||| || |         |||||||||||||| ||||||||||||||||||||||    
T  287442 atgacataattttttttcctatatatagacaaattgtttttcattattttcatct 287496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 15605402 - 15605343
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat 312  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15605402 catctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 15605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 15648385 - 15648314
Alignment:
Q  306 attttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  15648385 attttacatcaaccaataaaaaaaggaccatgactcatttgttttttatgagccaatcataatggatcatga 15648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 15923684 - 15923611
Alignment:
Q  304 ttattttatatcaaccaataaaaagaggatcatgactcatttgttttt-catgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  15923684 ttattttatatcaaccaataaaaaaag-atcatgactcattttttttttcatgagccaatcaaaatggatcatga 15923611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 15605188 - 15605117
Alignment:
Q  304 ttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||    
T  15605188 ttattttatatcaaccaataaaaaaag-atcatgactcattttttttt-atgagccaatcaaaatggatcatga 15605117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 25113514 - 25113397
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagag-gatcatgactcatttgtttttcatga 356  Q
    ||||||||||||| |||||||||||| ||||| ||||||||| || |||| | || | ||||||| |||| |  ||||||||||||||| |||||||| |    
T  25113514 catttaatgtttttttatcatccaattaaaatagattatgactcacttatat-attttaaccaatcaaaaaatagatcatgactcatttatttttcatta 25113416  T
Q  357 gccaatcaaaatggatcat 375  Q
    ||||||||||||| |||||    
T  25113415 gccaatcaaaatgaatcat 25113397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 15613755 - 15613696
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat 312  Q
    |||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  15613755 catctcatttaatgttttcttatcatacaatcaaaacggattttgacacatttattttat 15613696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 17895138 - 17895021
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||| |||||| ||||||| ||||||| ||||| |||   |||| | | | ||||| ||||||| |||||||||||||| ||||| |||||    
T  17895138 catttaatgtttt-ttatcaaccaatcagaatggatcatgactcataatttttttcttagccaatcaaaagag-atcatgactcatttattttttatgag 17895041  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||| ||||||||    
T  17895040 ccaatcaaaattgatcatga 17895021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 4930230 - 4930272
Alignment:
Q  335 atgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4930230 atgactcatttgtttttcatgagccaatcaaaatggatcatga 4930272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 426
Target Start/End: Original strand, 18666790 - 18666969
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| ||||||||| ||| |||||||||||||||| || |||||||| |||| | |||| ||| | ||||| || |  | | ||||||||||||    
T  18666790 attcttcatctcatttaatgcttttttatcatccaatcaaattgaattatgactcattcatttttttattagccaatcaaga-tgaaccatgactcattt 18666888  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
      ||||||| | |||||||||||||||||||   |||         |||||||||| ||||||||||||||||||||||||    
T  18666889 agttttcatcaaccaatcaaaatggatcatgccttgatttttttccctatatataggcaatttgtttttcattattttcat 18666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 23136464 - 23136533
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaa 327  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||| ||| | ||||| ||||    
T  23136464 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattagccaatcaaaa 23136533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 15923991 - 15923951
Alignment:
Q  332 atcatgactcatttgtttttcatgagccaatcaaaatggat 372  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15923991 atcatgactcatttgtttttcatgagccaatcaaaatggat 15923951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 27521272 - 27521102
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat-atcaaccaataaaaagaggatcatgactcatttgtttttcatga 356  Q
    ||||||||| |||  ||||| ||||| |||||||||  ||   |||||||||| | |||| ||||| ||||  ||||||||||| |||| ||||||||||    
T  27521272 catttaatgcttttctatcaaccaattaaaatggatcctgcatcatttatttttttatcagccaatcaaaat-ggatcatgactaatttctttttcatga 27521174  T
Q  357 gccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||||||||| || ||||  ||||         ||||| ||||| |||||||||||||||||||||||||    
T  27521173 gccaatcaaaattgaccatgtcatgattttttttcctatacatagataatttgtttttcattattttcatct 27521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 15923898 - 15923839
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat 312  Q
    |||| |||||||| ||||||||||||||||||||||  |||| |||||||||||||||||    
T  15923898 catctcatttaatattttcttatcatccaatcaaaacagattttgacacatttattttat 15923839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 247 - 423
Target Start/End: Original strand, 8362304 - 8362480
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| |||||||||||||||||||||||||||||| || |||||||| | || | |||| ||| | ||||| || |  | | ||||||||||||    
T  8362304 attcttcatctcatttaatgttttcttatcatccaatcaaattgaattatgactctttcatttttttattagccaatcaaga-tgaaccatgactcattt 8362402  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattatttt 423  Q
      ||||||| | ||||||||||| |||||||   |||          |||||||||||||||||||||||||||||||    
T  8362403 agttttcatcaaccaatcaaaattgatcatgccttgatttttttccttatatatagacaatttgtttttcattatttt 8362480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 12167224 - 12167179
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  12167224 ggatcatgactcatttatttttcatgagccaatcaaaattgatcat 12167179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 12411652 - 12411607
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  12411652 ggatcatgactcatttatttttcatgagccaatcaaaattgatcat 12411607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 35136706 - 35136758
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||| ||||    
T  35136706 catttaatgttttcttatcatccaatcaaattgaattatgactcatttgtttt 35136758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 772688 - 772597
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat-aaaaagaggatcatgactcatttgtt 348  Q
    ||||||||||||  ||||||| ||||||||||| |||||||| ||| ||||||  | |||||||| |||||   ||||||||||||||||||    
T  772688 catttaatgtttctttatcattcaatcaaaatgaattatgactcatctatttttcaacaaccaatcaaaaaatagatcatgactcatttgtt 772597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 15636889 - 15636830
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttat 312  Q
    |||| |||||||||| || ||||||||||||||||| |||||  ||||||||||||||||    
T  15636889 catctcatttaatgtatttttatcatccaatcaaaacggatttggacacatttattttat 15636830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 19190675 - 19190710
Alignment:
Q  177 taatctttatctttatctttattatatatatttgcg 212  Q
    ||||||||||||||||||||||||||||||||||||    
T  19190675 taatctttatctttatctttattatatatatttgcg 19190710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 23689282 - 23689219
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    ||||| |||| ||||||||| |||||||||||||||||||| || |||||||| |||| |||||    
T  23689282 attcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttt 23689219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 45251121 - 45250949
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcatttgttttt 351  Q
    |||| ||||||||| |||||||||||||||||||| || |||||||| |||| | |||| ||| | || || || |  | | ||||||||||||  ||||    
T  45251121 catctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttttttattagccgatcaaga-tgaaccatgactcatttagtttt 45251023  T
Q  352 catgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    ||| | ||||||||||| |||||||   |||         |||||||||||||||||||||||||||||||||||    
T  45251022 catcaaccaatcaaaattgatcatgccttga-tttttttcctatatatagacaatttgtttttcattattttcat 45250949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 16291992 - 16292037
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  16291992 ggatcatgactcatttatttttcatgagtcaatcaaaattgatcat 16292037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Original strand, 4930305 - 4930340
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatc 427  Q
    |||||||||||||||||||||||||| |||||||||    
T  4930305 ctatatatagacaatttgtttttcatcattttcatc 4930340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 23689138 - 23689104
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||| |||||||||||||||||||||||||    
T  23689138 ctatatataaacaatttgtttttcattattttcat 23689104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 23161172 - 23161056
Alignment:
Q  259 atttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagc 358  Q
    |||||||||||||||| ||| |||||||| || || ||||| ||||| |||| ||| |  |||| ||||  | |||||||| |||||  |||||||  ||    
T  23161172 atttaatgttttcttaacatacaatcaaattgaatcatgactcatttcttttttattagtcaatcaaaa-tgaatcatgacacatttagttttcataggc 23161074  T
Q  359 caatcaaaatggatcatg 376  Q
    |||||||||| |||||||    
T  23161073 caatcaaaattgatcatg 23161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 25063975 - 25064004
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaa 287  Q
    ||||||||||||||||||||||||||||||    
T  25063975 catttaatgttttcttatcatccaatcaaa 25064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 34410 - 34291
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  34410 catttaatgctttcatatcatctaatcaaaattgattatgacacatttattttatatcaaccaataaaaaaaggattatgacacatttgtttttcatgag 34311  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||||||| ||||    
T  34310 ccaatcaaaatggattatga 34291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 6e-41; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 37069805 - 37069683
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  37069805 catctcatttaatgttttcttatcatccaatcaaaatgaatt--gaaacatttattttatatcaaccaataaaaaaaggattatgacacatttgtttttc 37069708  T
Q  353 atgagccaatcaaaatggatcatga 377  Q
     ||||||||||||||||||||||||    
T  37069707 gtgagccaatcaaaatggatcatga 37069683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 17462041 - 17461926
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||| ||| ||||     
T  17462041 catttagtgtttttttatcaaccaatcaaaatggattatgatacatttattttatatcaaccaat-aaaagaagattatgactcatttgtgttttatgaa 17461943  T
Q  358 ccaatcaaaatggatca 374  Q
    |||||||||||||||||    
T  17461942 ccaatcaaaatggatca 17461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 24193 - 24024
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||| ||| | |||| ||||||||||| ||| ||||| |||||||||| ||| | ||||| ||||  |||| ||||||||||| |||||||| ||    
T  24193 catttaatgatttttcatcaaccaatcaaaatagatcatgactcatttattttttattagccaatcaaaat-ggataatgactcatttatttttcattag 24095  T
Q  358 ccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||||||| |||||||| ||||         |||||||||||||| ||||||||||||||||||||||    
T  24094 ccaatcaaaattgatcatgacatgattttttttcctatatatagacaaattgtttttcattattttcatct 24024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 428
Target Start/End: Complemental strand, 13914798 - 13914684
Alignment:
Q  313 atcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgttt 412  Q
    |||||||||| |||| || |||||||||||||| ||||| || ||||||||||||| |||||| | ||||         |||||||||||||| ||||||    
T  13914798 atcaaccaatcaaaatag-atcatgactcatttattttttattagccaatcaaaattgatcattacatgattttttttcctatatatagacaaattgttt 13914700  T
Q  413 ttcattattttcatct 428  Q
    ||||||||||||||||    
T  13914699 ttcattattttcatct 13914684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 13923330 - 13923288
Alignment:
Q  335 atgactcatttgtttttcatgagccaatcaaaatggatcatga 377  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13923330 atgactcatttgtttttcatgagccaatcaaaatggatcatga 13923288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 18066848 - 18066676
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||| ||| || |||||||| |||||||||| ||| | ||||| || |  ||| ||||||||||||  |||||    
T  18066848 catctcatttaatgttttcttatcatccaattaaattgaattatgactcatttattttttattagccaatcaaga-tggaccatgactcatttagttttc 18066750  T
Q  353 atgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    |  | ||||||||||| ||| |    ||||         || ||||||||||||||||||||||||||||||||    
T  18066749 accaaccaatcaaaattgattacacaatgatttttgtctctgtatatagacaatttgtttttcattattttcat 18066676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 426
Target Start/End: Original strand, 35647971 - 35648138
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    |||||||| ||||||||||||||||||||| || ||||||||  ||||||||| ||| | ||||| ||||  |  |||| || |||||  ||||||  ||    
T  35647971 catttaatattttcttatcatccaatcaaattgaattatgacttatttattttttattagccaatcaaaa-tgattcataacacatttagttttcactag 35648069  T
Q  358 ccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||||| | |||||  ||||         |||||||| ||||||||||||||||||||||||||    
T  35648070 ccaatcaaaattgttcatgtcatgattttttttcctatatattgacaatttgtttttcattattttcat 35648138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 14288190 - 14288140
Alignment:
Q  332 atcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatga 382  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||| ||||    
T  14288190 atcatgactcatttatttttcattagccaatcaaaattgatcatgacatga 14288140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 37069651 - 37069615
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37069651 ctatatatagacaatttgtttttcatcattttcatct 37069615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 13923253 - 13923218
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatc 427  Q
    |||||||||||||||||||||||||| |||||||||    
T  13923253 ctatatatagacaatttgtttttcatcattttcatc 13923218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 210
Target Start/End: Complemental strand, 55058011 - 55057980
Alignment:
Q  179 atctttatctttatctttattatatatatttg 210  Q
    ||||||||||||||||||||||||||||||||    
T  55058011 atctttatctttatctttattatatatatttg 55057980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 10780389 - 10780423
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||| ||||||||||||||||||||||||    
T  10780389 ctatatataggcaatttgtttttcattattttcat 10780423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 10973998 - 10974032
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    |||||||||| ||||||||||||||||||||||||    
T  10973998 ctatatataggcaatttgtttttcattattttcat 10974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 13924648 - 13924614
Alignment:
Q  177 taatctttatctttatctttattatatatatttgc 211  Q
    |||||| ||||||||||||||||||||||||||||    
T  13924648 taatctctatctttatctttattatatatatttgc 13924614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 17990085 - 17990114
Alignment:
Q  179 atctttatctttatctttattatatatatt 208  Q
    ||||||||||||||||||||||||||||||    
T  17990085 atctttatctttatctttattatatatatt 17990114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 18072904 - 18072875
Alignment:
Q  179 atctttatctttatctttattatatatatt 208  Q
    ||||||||||||||||||||||||||||||    
T  18072904 atctttatctttatctttattatatatatt 18072875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 501100 - 501220
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat-aaaaagaggatcatgactcatttgtttttcatga 356  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||||| ||||||||||||||||||||||||||||    
T  501100 catttaatactttcttatcatccaatcaaaattgattatgacacatttattttatatcaatcgataaaaaaaaggatcatgactcatttgtttttcatga 501199  T
Q  357 gccaatcaaaatggatcatga 377  Q
    |||||||||||| ||||||||    
T  501200 gccaatcaaaatagatcatga 501220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 36647960 - 36648079
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||  |||| || | |||||||||||| |||||     
T  36647960 catttaatgttttcttatcttctaatcaaaatagattatgtcacgtttattttatatcaaccaataaaagaaggaccacggctcatttgttttacatgaa 36648059  T
Q  358 ccaatcaaaatggatcatga 377  Q
    ||||||||||||||||||||    
T  36648060 ccaatcaaaatggatcatga 36648079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 426
Target Start/End: Original strand, 27588612 - 27588791
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacattta-ttttatatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| |||||||| ||||||||||||||||||||| || |||||||| |||||| |||| ||| | ||||| || |  | | ||||||||||||    
T  27588612 attcttcatctcatttaatattttcttatcatccaatcaaattgaattatgactcatttatttttttattagccaatcaaga-tgaaccatgactcattt 27588710  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
      ||||||| | ||||||||||| |||||||   |||         | |||||||||||||||||||||||||||||||||    
T  27588711 agttttcatcaaccaatcaaaattgatcatgccttgattttttttccaatatatagacaatttgtttttcattattttcat 27588791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 9663135 - 9663066
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaa 327  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||| ||| | ||||| ||||    
T  9663135 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattagccaatcaaaa 9663066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 428
Target Start/End: Complemental strand, 19205946 - 19205849
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||   ||||         ||||||||||| |||||||||||||||||||||||||    
T  19205946 ggatcatgactcatctatttttcatgagccaatcaaaattgatcatatcatga-tttttttcctatatatagataatttgtttttcattattttcatct 19205849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 29857767 - 29857812
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  29857767 ggatcatgactcatttatttttcatgagtcaatcaaaattgatcat 29857812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 501252 - 501288
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  501252 ctatataaagacaatttgtttttcatcattttcatct 501288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 11127769 - 11127864
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat-aaaaagaggatcatgactcatttgt 347  Q
    |||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  11127769 catctcatttaatattttattatcaaccaatcaaaatggattatgacacatttattttatatcaaccaataaaaaaaaagatcatgactcatttgt 11127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 45049526 - 45049668
Alignment:
Q  285 aaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgatatgann 384  Q
    ||||| ||| ||||| |||||| ||| ||| | ||||| ||||  |||||||||||||||| |||||||| ||||||||||||| |||||||| ||||      
T  45049526 aaaatagatcatgactcatttaatttttattagccaatcaaaat-ggatcatgactcatttatttttcattagccaatcaaaattgatcatgacatgatt 45049624  T
Q  385 nnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
           |||||||||||||| ||||||||||||||||||||||    
T  45049625 ttttttcctatatatagacaaattgtttttcattattttcatct 45049668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 426
Target Start/End: Original strand, 21119845 - 21120024
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttatttta-tatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| ||||||||| |||||||||||||||||||| || |||||||| |||| |||||| ||| | ||||| || |  | | ||||||||||||    
T  21119845 attcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcattttattattagccaatcaaga-tgaaccatgactcattt 21119943  T
Q  346 gtttttcatgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
      |||| || | ||||| ||||| ||||||| | |||         |||||||||||||||||||||||||||||||||||    
T  21119944 agtttttatcaaccaattaaaattgatcatgctttgattttttttcctatatatagacaatttgtttttcattattttcat 21120024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 20103500 - 20103562
Alignment:
Q  248 ttctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    |||| |||| |||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  20103500 ttctacatctcatttaatgttttcttatcatccaatcaaattgaattatgactcatttatttt 20103562  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 5243304 - 5243259
Alignment:
Q  330 ggatcatgactcatttgtttttcatgagccaatcaaaatggatcat 375  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  5243304 ggatcatgactcatttatttttcatgagccaatcaaaattgatcat 5243259  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 5244858 - 5244826
Alignment:
Q  179 atctttatctttatctttattatatatatttgc 211  Q
    |||||||||||||||||||||||||||||||||    
T  5244858 atctttatctttatctttattatatatatttgc 5244826  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 24972172 - 24972140
Alignment:
Q  394 atatatagacaatttgtttttcattattttcat 426  Q
    |||||||||||||||||||||||||||||||||    
T  24972172 atatatagacaatttgtttttcattattttcat 24972140  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 24972324 - 24972272
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgac 299  Q
    ||||| |||| ||||||||| |||||||||||||||||||| || ||||||||    
T  24972324 attcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgac 24972272  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 41747366 - 41747418
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttatttt 310  Q
    ||||||||||||| |||||||||||||||| || ||||||||  |||||||||    
T  41747366 catttaatgttttattatcatccaatcaaattgaattatgacttatttatttt 41747418  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 20103644 - 20103678
Alignment:
Q  392 ctatatatagacaatttgtttttcattattttcat 426  Q
    ||||||||||||| |||||||||||||||||||||    
T  20103644 ctatatatagacactttgtttttcattattttcat 20103678  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 31300006 - 31300044
Alignment:
Q  285 aaaatggattatgacacatttattttatatcaaccaata 323  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  31300006 aaaaaggattatgaaacatttattttatatcaaccaata 31300044  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 14876065 - 14876037
Alignment:
Q  184 tatctttatctttattatatatatttgcg 212  Q
    |||||||||||||||||||||||||||||    
T  14876065 tatctttatctttattatatatatttgcg 14876037  T

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Target: scaffold0018 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 428
Target Start/End: Complemental strand, 67354 - 67189
Alignment:
Q  262 taatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagccaa 361  Q
    ||||||||| |||||| ||||| ||||||||| ||||| |||||||||| ||| | | ||| ||||  ||||||| |||||||| |||||||| ||||||    
T  67354 taatgtttttttatcaaccaattaaaatggatcatgactcatttattttttattagcaaatcaaaat-ggatcataactcatttatttttcattagccaa 67256  T
Q  362 tcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    |||||||  ||||||| |||          ||||||||| |||||||||||||||||||||||||||    
T  67255 tcaaaatttatcatgaaatggttttttttcctatatatacacaatttgtttttcattattttcatct 67189  T

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Target: scaffold0022 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 258 - 428
Target Start/End: Original strand, 101102 - 101272
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||| ||| | |||| ||||||||||| ||| ||||| |||||||||| ||| | ||||| ||||  |||||||||||||||| |||||||| ||    
T  101102 catttaatgctttttcatcaaccaatcaaaatagatcatgactcatttattttttattagccaatcaaaat-ggatcatgactcatttatttttcataag 101200  T
Q  358 ccaatcaaaatggatcatgatatga-nnnnnnnnnctatatatagacaatttgtttttcattattttcatct 428  Q
    ||||||||||| || ||| | ||||          |||||||||||||| ||||||| ||||||||||||||    
T  101201 ccaatcaaaattgagcattacatgattttttttttctatatatagacaaattgttttacattattttcatct 101272  T

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Target: scaffold0155 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 26657 - 26786
Alignment:
Q  247 attctccatcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttat-tttatatcaaccaataaaaagaggatcatgactcattt 345  Q
    ||||| |||| |||||||||||||||||||||||||||||| || |||||||| |||| || ||| ||| ||||||| || |  | | ||||||||||||    
T  26657 attcttcatctcatttaatgttttcttatcatccaatcaaattgaattatgactcattcatatttttattaaccaatcaaga-tgaaccatgactcattt 26755  T
Q  346 gtttttcatgagccaatcaaaatggatcatg 376  Q
      ||||||| | |||||||||||||||||||    
T  26756 agttttcatcaaccaatcaaaatggatcatg 26786  T

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Target: scaffold0155; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 426
Target Start/End: Original strand, 26805 - 26836
Alignment:
Q  395 tatatagacaatttgtttttcattattttcat 426  Q
    ||||||||||||||||||||||||||||||||    
T  26805 tatatagacaatttgtttttcattattttcat 26836  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 52654 - 52482
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| |||||||||||||||||||||||||| ||| || |||||||| |||||||||| ||| | ||||| || |  ||| ||||||||||||  |||||    
T  52654 catctcatttaatgttttcttatcatccaattaaattgaattatgactcatttattttttattagccaatcaaga-tggaccatgactcatttagttttc 52556  T
Q  353 atgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    |  | ||||||||||| ||| |    ||||         || ||||||||||||||||||||||||||||||||    
T  52555 accaaccaatcaaaattgattacacaatgatttttgtctctgtatatagacaatttgtttttcattattttcat 52482  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 58710 - 58681
Alignment:
Q  179 atctttatctttatctttattatatatatt 208  Q
    ||||||||||||||||||||||||||||||    
T  58710 atctttatctttatctttattatatatatt 58681  T

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Target: scaffold0289 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 22239 - 22068
Alignment:
Q  253 catcccatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttc 352  Q
    |||| ||||||||| ||| | |||| |||||||||||  || ||||| |||||||||| |||    |||| |||| |  |||||||||||||| ||||||    
T  22239 catctcatttaatgctttttcatcaaccaatcaaaatatatcatgactcatttattttttatttgtcaatcaaaataa-atcatgactcatttatttttc 22141  T
Q  353 atgagccaatcaaaatggatcatgatatgannnnnnnnnctatatatagacaatttgtttttcattattttcat 426  Q
    || ||||||| ||||| |||||||| ||||         |||||||||||||| ||| ||||||||||||||||    
T  22140 attagccaattaaaattgatcatgacatga-ttttttccctatatatagacaacttgcttttcattattttcat 22068  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 67302 - 67185
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||| ||| |||||||| || |||||||| |||||||||| ||| | ||||| ||||  |  | ||||| |||||  ||||||  ||    
T  67302 catttaatgttttcttaccattcaatcaaattgaattatgactcatttattttttattagccaatcaaaa-tgatttatgacacatttagttttcaccag 67204  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  67203 ccaatcaaaattgatcatg 67185  T

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Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 75407 - 75290
Alignment:
Q  258 catttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgag 357  Q
    ||||||||||||||||| ||| |||||||| || |||||||| |||||||||| ||| | ||||| ||||  |  | ||||| |||||  ||||||  ||    
T  75407 catttaatgttttcttaccattcaatcaaattgaattatgactcatttattttttattagccaatcaaaa-tgatttatgacacatttagttttcaccag 75309  T
Q  358 ccaatcaaaatggatcatg 376  Q
    ||||||||||| |||||||    
T  75308 ccaatcaaaattgatcatg 75290  T

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Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 382
Target Start/End: Complemental strand, 17139 - 17020
Alignment:
Q  259 atttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaagaggatcatgactcatttgtttttcatgagc 358  Q
    |||||||||||| | |||| ||||||||||| |||  |||| |||||||||| ||| ||||||| |||| | |||||||||| |||| | ||| || ||     
T  17139 atttaatgttttttcatcaaccaatcaaaatagat--tgactcatttattttttattaaccaattaaaata-gatcatgacttatttatattttattag- 17044  T
Q  359 caatcaaaatggatcatgatatga 382  Q
    |||||||||| |||||||| ||||    
T  17043 caatcaaaattgatcatgacatga 17020  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 30978 - 31009
Alignment:
Q  181 ctttatctttatctttattatatatatttgcg 212  Q
    ||||||||||||||||||||||||||||||||    
T  30978 ctttatctttatctttattatatatatttgcg 31009  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 167814 - 167783
Alignment:
Q  181 ctttatctttatctttattatatatatttgcg 212  Q
    ||||||||||||||||||||||||||||||||    
T  167814 ctttatctttatctttattatatatatttgcg 167783  T

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Target: scaffold0200 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 3147 - 3119
Alignment:
Q  183 ttatctttatctttattatatatatttgc 211  Q
    |||||||||||||||||||||||||||||    
T  3147 ttatctttatctttattatatatatttgc 3119  T

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