View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2524_high_11 (Length: 374)
Name: NF2524_high_11
Description: NF2524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2524_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 18 - 364
Target Start/End: Original strand, 24655197 - 24655543
Alignment:
| Q |
18 |
agatgaaccccaaaagtttcaccactaagttgcttcaatttggcttcaacccatttttcttcacttctagttttaggcttcctnnnnnnnccacctatct |
117 |
Q |
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| T |
24655197 |
agatgaaccccaaaagtttcaccactaagttgcttcaatttggcttcaacccatttttcttcacttctagttttaggcttcctaaaaaaaccacctatct |
24655296 |
T |
|
| Q |
118 |
tagtccaactaaccggataaaaggccataggtggcaaaattgtaaaattgaaaccttgtcttttcttaagtctttcaacaactctagaaacaaggtaagg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24655297 |
tagtccaactaaccggataaaaggccataggtggcaaaattgtaaaattgaaaccttgtcttttcttaagtctttcaacaactctagaaacaaggtaagg |
24655396 |
T |
|
| Q |
218 |
accattatgcccccatttatttccatcaaaagtcaaagcaaattcattaatgaaccttagaagaagtggatgattcttatcaaaaataagaacagcattg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
24655397 |
accattatgcccccatttatttccatcaaaagtcaaagcaaattcattaatgaaccttagaacaagtggatgattcttatcaaaaataagaacagcattg |
24655496 |
T |
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| Q |
318 |
tttaatctagtccaatgtttagtaccaaaatccatgctctgtgctcc |
364 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
24655497 |
tttaatctagtccaatgtttagtaccaaaatccatgctttgtgctcc |
24655543 |
T |
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