View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2524_high_34 (Length: 243)
Name: NF2524_high_34
Description: NF2524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2524_high_34 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 11996288 - 11996514
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11996288 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
11996387 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11996388 |
agaaattagttatgtaattatacgggacaagtctgagccatacctgagtggcgtgcacacattcacgaaggacatgaatgactgtttcatcctctctcgc |
11996487 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
|||||||||||||| |||||||||||| |
|
|
| T |
11996488 |
acaacaaggacaagaaggggagatacc |
11996514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42865471 - 42865245
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42865471 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaacccactccctgcaatcaaaagaga |
42865372 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
42865371 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgagtagagtgcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
42865272 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
42865271 |
acaacaaggacaagtaggggagatacc |
42865245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24126968 - 24127090
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatccc---ttttttattaaggttgttaaaaatccactccctgcaatcaaaag |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
24126968 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctcccatcactttttttttatcaaggttgttaaatatccactccctgcaatcaaaag |
24127067 |
T |
|
| Q |
98 |
agaagaaattacttatgtcatta |
120 |
Q |
| |
|
||||||||||| |||||| |||| |
|
|
| T |
24127068 |
agaagaaattagttatgtaatta |
24127090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 17525612 - 17525518
Alignment:
| Q |
5 |
atgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagag |
99 |
Q |
| |
|
|||| ||||||||||||||||||||| || | ||||||||||| ||||||||||| ||| | || || ||||||||| |||| ||||||||| |
|
|
| T |
17525612 |
atgtcgtcatgaaagtagtctgccaaataattgagttatctccaataccttttttattgaggctattgaagatccactccatgcattcaaaagag |
17525518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 26381868 - 26381936
Alignment:
| Q |
45 |
tccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagagaagaaattacttat |
113 |
Q |
| |
|
||||| ||||||| |||| ||||| || ||||| || ||||||||||||||||| || |||||| |||| |
|
|
| T |
26381868 |
tccaaccccttttctattgaggttattgaaaattcaatccctgcaatcaaaagaaaataaattatttat |
26381936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 45034231 - 45034457
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45034231 |
caacatgttatcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
45034330 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| |
|
|
| T |
45034331 |
agaaattagttatgtaattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggatatgaatgactatttcatcctctctcgc |
45034430 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
45034431 |
acaacaaggacaagtaggggagatacc |
45034457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 38111227 - 38111453
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38111227 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
38111326 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
38111327 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgagtagcgtgcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
38111426 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
38111427 |
acaacaaggacaagtaggggagatacc |
38111453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8035265 - 8035040
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
8035265 |
caacatgttgtcatgaaagtagtctgccaagtagcagaattatctccaatcccctttttattaaggttgttaaaaatccactcctt-caattaaaagaga |
8035167 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8035166 |
agaaattagttatgtaattatacgggacaagtctgagccacacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcac |
8035067 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
8035066 |
acaacaaggacaagtaggggagatacc |
8035040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 46045461 - 46045235
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
46045461 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactctctgcaatcaaaagaga |
46045362 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
46045361 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgattagcgtgcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
46045262 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
46045261 |
acaacaaggacacgtaggggagatacc |
46045235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 19304088 - 19304290
Alignment:
| Q |
7 |
gttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttatta---aggttgttaaaaatccactccctgcaatcaaaagagaaga |
103 |
Q |
| |
|
|||||| |||||| |||||| ||||||| || ||||||||||||| ||||||| ||| ||||||||||| || |||||||| |||||||||||||| | |
|
|
| T |
19304088 |
gttgtcgtgaaagaagtctgtcaagtagtagaattatctccaatcactttttt-ttacggaggttgttaaagattcactccctacaatcaaaagagaata |
19304186 |
T |
|
| Q |
104 |
aattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgcaca |
203 |
Q |
| |
|
||||| |||| | |||| ||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
19304187 |
aattagttatataattagacgggacaagtctgaatcatacatgagtggcatacacacaatcacgaaggacatgaa----tgtttcaacctctctcgcaca |
19304282 |
T |
|
| Q |
204 |
acaaggac |
211 |
Q |
| |
|
||| |||| |
|
|
| T |
19304283 |
acatggac |
19304290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28945921 - 28946147
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28945921 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
28946020 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28946021 |
agaaattagttatgtaattatatgggataagtctgagccatacctgagtagcgtgcacacaatcacgaaggacatgaatgattgtttcatactctctcgc |
28946120 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
28946121 |
acaacaaggacaagtaggggagatacc |
28946147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1368988 - 1368762
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1368988 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
1368889 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1368888 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgagtagcgtgcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
1368789 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
1368788 |
acaacaaggacaagtaggggagatacc |
1368762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 36859370 - 36859575
Alignment:
| Q |
22 |
gtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagagaagaaattacttatgtcattat |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
36859370 |
gtctgccaagttgcaggattatctccaatcccttttttattaaggttgttaaagatccactccctgcaatcaaaagagaagaaattagttatgtaattag |
36859469 |
T |
|
| Q |
122 |
acgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgcacaacaaggacaagtagggga |
221 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36859470 |
acggaacaagtttgagccatacctgagtggcgtgcacaaaatcacgaaggacatgaatgattgtttcatcctctctcacacaacaaggacaagtagggga |
36859569 |
T |
|
| Q |
222 |
gatacc |
227 |
Q |
| |
|
|||||| |
|
|
| T |
36859570 |
gatacc |
36859575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 34104138 - 34104206
Alignment:
| Q |
135 |
gagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgcaca |
203 |
Q |
| |
|
||||||||||||||| |||| ||||| |||||||| ||||||||| | || ||||| |||||| |||| |
|
|
| T |
34104138 |
gagccatacctgagtagcgtagacacagtcacgaagcacatgaatggtagtctcatcatctctcccaca |
34104206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 45092995 - 45092770
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
45092995 |
caacatgttgtcgtgaaattagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatc-actcactgcaatcaaaagaga |
45092897 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45092896 |
agaaattacttatgtaattatacgggataagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
45092797 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
45092796 |
acaacaaggacaagtaggggagatacc |
45092770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 41999838 - 41999612
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41999838 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
41999739 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41999738 |
agaaattagttatgtaattttacgagacaagtctaagccatacctgagtggcgttcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
41999639 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||| ||||||||||||| |
|
|
| T |
41999638 |
acaacaaggacaaataggggagatacc |
41999612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 9215774 - 9215550
Alignment:
| Q |
4 |
catgttgtcatgaaagtagtctgccaagtagcaggattatctccaatccctttttt-attaaggttgttaaaaatccactccctgcaatcaaaagagaag |
102 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
9215774 |
catgatgtcatgaaagtagtctcccaagtagcaggattatctccaatccttttttttattaaggttgttaaagatccactccctacaatcaaaagagaag |
9215675 |
T |
|
| Q |
103 |
aaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgcac |
202 |
Q |
| |
|
|||||| |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9215674 |
aaattagttatataattagacgtgtcaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctgacac |
9215575 |
T |
|
| Q |
203 |
aacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
9215574 |
atcaaggacaagtaggggagatacc |
9215550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14024489 - 14024263
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14024489 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaacccactccctgcaatcaaaagaga |
14024390 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
14024389 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgagtagcgtgcacacaatcacgaaggacatgaatgactgtttcatcctctctcgc |
14024290 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
14024289 |
acaacaaggacaagtaggggagatacc |
14024263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32386042 - 32385939
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
32386042 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatctactccatgcaatcaaaagaga |
32385943 |
T |
|
| Q |
101 |
agaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
32385942 |
agaa |
32385939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6293570 - 6293344
Alignment:
| Q |
1 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6293570 |
caacatgttgtcatgaaagtagtctgccaagtagcaggattatctccaatcccttttttattaaggttgttaaaaatccactccctgcaatcaaaagaga |
6293471 |
T |
|
| Q |
101 |
agaaattacttatgtcattatacgggacaagtctgagccatacctgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctctctcgc |
200 |
Q |
| |
|
|||||||| |||||| ||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6293470 |
agaaattagttatgtaattatgtgggataagtctgagccatacctgattagcgtgcacacaatcacgaaggacatgaatgaccgtttcatcctctctcgc |
6293371 |
T |
|
| Q |
201 |
acaacaaggacaagtaggggagatacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
6293370 |
acaacaaggacaagtaggggagatacc |
6293344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 34902667 - 34902617
Alignment:
| Q |
145 |
tgagtggcgtgcacacaatcacgaaggacatgaatgattgtttcatcctct |
195 |
Q |
| |
|
|||||||||||||| || |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
34902667 |
tgagtggcgtgcacgcagtcacaaagcacatgaaggattgtttcatcctct |
34902617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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