View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2524_low_22 (Length: 293)
Name: NF2524_low_22
Description: NF2524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2524_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 29175640 - 29175354
Alignment:
| Q |
1 |
gtagctttgcctcaaccatgcttatgttgctcattttttcttttctaacaaa-gatatagaagagaaattaagaaacaagttcaaacttcacaagtgaga |
99 |
Q |
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| T |
29175640 |
gtagctttgcctcaaccatgcttatgttgctcattttttcttttctaacaaaagatatagaagagaaattaagaaacaggttcaaacttcacaagtgaga |
29175541 |
T |
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| Q |
100 |
attttttaaagatggaaataattatagagaaggtggagatgaaatgtgnnnnnnnnnnnnnnaatgagagtgggaacagaagtggaaaagtcaacatgta |
199 |
Q |
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| T |
29175540 |
attttttaaagatggaaataattatagagaaggtggagatgaaatgtgtatatatatatataaatgagagtgggaacggaagtggaaaagtcaacatgta |
29175441 |
T |
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| Q |
200 |
attgctttgaatgaggaagggtagttatgtaattaagttctatatttgcatagttataattgttattagaaagatgtatgatgatgt |
286 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29175440 |
attgctttgaatggggaagggtagttatgtaattaagttctatatttgcatagttataattgttattagaaagatgtatgatgatgt |
29175354 |
T |
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