View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2524_low_35 (Length: 250)
Name: NF2524_low_35
Description: NF2524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2524_low_35 |
 | |
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| [»] chr5 (4 HSPs) |
| |
|
| [»] chr4 (7 HSPs) |
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| [»] chr8 (9 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] chr2 (5 HSPs) |
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| [»] chr1 (9 HSPs) |
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| [»] chr3 (10 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 14024901 - 14024654
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14024901 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
14024802 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14024801 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
14024702 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14024701 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
14024654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 32386454 - 32386207
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32386454 |
catgtcgaccaagatctttgagtcactctccagtataagatgagtgttattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
32386355 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
32386354 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatcttccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
32386255 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
32386254 |
ccatccaagcaccatcacaattaagcttaacccaaccaatcggaggtc |
32386207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 12448612 - 12448445
Alignment:
| Q |
18 |
ctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcacac |
117 |
Q |
| |
|
|||||| |||| |||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
12448612 |
ctttgaatcacactccactataagataagtggtgttatccctccatgc-atgtccaaacctagatacatgccccacatttcgacatgaaaaacatcacat |
12448514 |
T |
|
| Q |
118 |
attccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccct |
186 |
Q |
| |
|
|| |||| ||||||||||| | ||||||||||| | ||| || ||| ||||||| ||||| ||||||| |
|
|
| T |
12448513 |
gtttcaattttcttgaagtaacatttgatccatccggcatgagtgtcccgaagaaaccctcaacaccct |
12448445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 18259277 - 18259426
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| ||||||||| ||| | || | |||||||| |||||| |
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|
| T |
18259277 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaaaccatgtccagacccaaatatagcccccacatctcagca |
18259376 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||| ||||||||||||| |
|
|
| T |
18259377 |
tgtaaggcatcacaagctccaatcttcttagtgtagtctttgatccatct |
18259426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 1369400 - 1369153
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1369400 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
1369301 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1369300 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
1369201 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1369200 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
1369153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 28945509 - 28945756
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28945509 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
28945608 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28945609 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
28945708 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28945709 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
28945756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 36858962 - 36859196
Alignment:
| Q |
16 |
atctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
115 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
36858962 |
atctttgagtcactctccactgtgagatgagtggtattccccctccacgccaagtccaaacctaggtacatgccccacatttcagcatgaaaagcatcac |
36859061 |
T |
|
| Q |
116 |
acattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatcccttccaagcacc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
36859062 |
acattccaatcttcttgaagtagcctttgatccatctaccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatccctttcaagcacc |
36859161 |
T |
|
| Q |
216 |
atcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||| |||||||||| |||||| | |||||| |
|
|
| T |
36859162 |
atcacaatcaagcttaacctaaccaatctgaggtc |
36859196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 44307477 - 44307377
Alignment:
| Q |
16 |
atctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
115 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44307477 |
atctttgagtcactctccactataatatgagtggtattctccctccacgccatgtccaaacctaggtacatgccccacatttcagcatgaaaagcatcac |
44307378 |
T |
|
| Q |
116 |
a |
116 |
Q |
| |
|
| |
|
|
| T |
44307377 |
a |
44307377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 36894554 - 36894703
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
36894554 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagccatgtccaaacccaaatatagcccccacatctcagca |
36894653 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
36894654 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
36894703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 34389943 - 34390092
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| ||||||||||||| | || | |||||||| |||||| |
|
|
| T |
34389943 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagccatgtccaaactcaaatatagcccccacatctcagca |
34390042 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
34390043 |
tgtaaggcatcacaagctccaatcttcttagtatagcctttgatccatct |
34390092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 33687969 - 33688011
Alignment:
| Q |
64 |
gccatgtccaaacctaggtacatgccccacatttcagcatgaa |
106 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
33687969 |
gccatatccaaaccaagatacatgccccacatttcagcatgaa |
33688011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 45093407 - 45093160
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45093407 |
catgtcgaccaagatctttgagtcactatccactataagatgagtggtattctccctccacgccatgtccaaacctaggtacatgccccacatttcagca |
45093308 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45093307 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttaatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatg |
45093208 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45093207 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
45093160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 33373164 - 33372917
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33373164 |
catgtcgaccaagatctttgagtcactctccactataagatgagttgtattctccctccacgccatgtccaaacctaggtacatgccccacatttcagca |
33373065 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33373064 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccattagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
33372965 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33372964 |
ccttccaaacaccatcacaattaagcttaacccaactaaacggaggtc |
33372917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 42000228 - 42000003
Alignment:
| Q |
16 |
atctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
115 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42000228 |
atctttgagtcactc--cactataagattagtggtattctccctccacgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
42000131 |
T |
|
| Q |
116 |
acattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatcccttccaagcacc |
215 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42000130 |
acattccaatcttcttgaactagcctttgatc-------catcagagtctcgaagaagccctccacaccctgcaagagtaccagatcccttccaagcacc |
42000038 |
T |
|
| Q |
216 |
atcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
42000037 |
atcacaattaagcttaacccaaccaaacggaggtc |
42000003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 9216189 - 9215942
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||| |||||||||||| | |||||||||| | |
|
|
| T |
9216189 |
catgtcgaccaaaatctttgagtcactctctactataagataagtggtgttctccctccacaccatgtccagacctaggtacatatctcacatttcagta |
9216090 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
9216089 |
tgaaaagcatcacacattccaatcttttagaattagcctttgatccatctaccatcagagtcccgaagaagccccccacaccctgcaagagtaccagatc |
9215990 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||| | ||| ||||||||||| |||||||||||||| | |||||| |
|
|
| T |
9215989 |
ccttcagaacactatcacaattaatcttaacccaaccaaccagaggtc |
9215942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 14769970 - 14769814
Alignment:
| Q |
84 |
catgccccacatttcagcatgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacac |
183 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| || ||||||| |||||||||||||||||| |||||||| | |||| |||||||||||||||||| |
|
|
| T |
14769970 |
catgccccatatttcaccatgaaaaacatcacatgtttcaatctttttgaagtagcctttgatcaatctgccactatagtcgcgaagaagccctccacac |
14769871 |
T |
|
| Q |
184 |
cctgcaaaagtaccagatcccttccaagcaccatcacaattaagcttaacccaacca |
240 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||||||| ||||| |||||| |
|
|
| T |
14769870 |
cctgcaagagtactagatccctttcaaacaccatcacaattaagtttaactcaacca |
14769814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 14809442 - 14809283
Alignment:
| Q |
81 |
gtacatgccccacatttcagcatgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctcca |
180 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||| || ||||||| |||||||||||||||||| |||| | | | || | ||||||||||||||| |
|
|
| T |
14809442 |
gtacatgccccatatttcaccatgaaaaacatcacatgtttcaatctttttgaagtagcctttgatcaatcttctactatagccgcgaagaagccctcca |
14809343 |
T |
|
| Q |
181 |
caccctgcaaaagtaccagatcccttccaagcaccatcacaattaagcttaacccaacca |
240 |
Q |
| |
|
|||||||||| ||||| | ||||||| ||| |||||||||||||||| |||||||||||| |
|
|
| T |
14809342 |
caccctgcaagagtactaaatccctttcaaacaccatcacaattaagtttaacccaacca |
14809283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 14343089 - 14343218
Alignment:
| Q |
45 |
agtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcacacattccaatcttcttgaagtagcctttg |
144 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||| |
|
|
| T |
14343089 |
agtggtgttctccctccatgccatgtccaaaccaagatacatgccccacattttggcatgaaaagcatcacacgttccaatcttcttgaagtagccattg |
14343188 |
T |
|
| Q |
145 |
atccatctgccatcagagtctcgaagaagc |
174 |
Q |
| |
|
||| ||| ||||||||||| | ||||||| |
|
|
| T |
14343189 |
atctatccaccatcagagtcgcaaagaagc |
14343218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 1636059 - 1635912
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| | ||| |||||||| | || | |||||||| |||||| |
|
|
| T |
1636059 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatattccctccaagtcatatccaaacccaaatatagtccccacatctcagca |
1635960 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccat |
150 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
1635959 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccat |
1635912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 456578 - 456642
Alignment:
| Q |
88 |
ccccacatttcagcatgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|||||||| ||||||| || |||||||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
456578 |
ccccacatctcagcatataagacatcacaaactccaatcttcttagtgtagcctttgatccatct |
456642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 38110815 - 38111062
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
38110815 |
catgtcgaccaatatctttgagtcactctccactataagatgagtggtattctccctccacgccatgttcaaacctaggtacatgccccatatttcagca |
38110914 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
38110915 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctacaagagtaccagatc |
38111014 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38111015 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
38111062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 46045873 - 46045626
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46045873 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
46045774 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
46045773 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagctctccacaccctgcaagagtaccagatc |
46045674 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46045673 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
46045626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 8035677 - 8035430
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8035677 |
catgtcgaccaagatctttgagtcactctccactataagatgaatggtattctccctccacaccatgtccaaacctaggtacatgccccacatttcagca |
8035578 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8035577 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
8035478 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
8035477 |
ccttccaagcaccatcacaattaagcttaacccaagcaattggaggtc |
8035430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 45033835 - 45034066
Alignment:
| Q |
19 |
tttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcacaca |
118 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
45033835 |
tttgagtcactctccactataagataagtggtattttctctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaagcatcacaca |
45033934 |
T |
|
| Q |
119 |
ttccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatcccttccaagcaccatc |
218 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
45033935 |
tttcaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccatatcccttccaagcaccatc |
45034034 |
T |
|
| Q |
219 |
acaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |
|
|
| T |
45034035 |
acaattaagcttaacccaaccaatcggaggtc |
45034066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 8019882 - 8020031
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
8019882 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagccatgtccaaacccaaatatagtccccacatctcagca |
8019981 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
8019982 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
8020031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 42865883 - 42865636
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42865883 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
42865784 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42865783 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccagatc |
42865684 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42865683 |
ccttccaggcaccatcacaattaagcttaacccaaccaaacggaggtc |
42865636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 24126556 - 24126803
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24126556 |
catgtcgaccaagatctttgagtcactctccactataagatgagtggtattctccctccacgccatgttcaaacctaggtacatgccccacatttcagca |
24126655 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24126656 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
24126755 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| || |||||||| |
|
|
| T |
24126756 |
ccttccaagcaccatcgcaattaagcttaacccaacaaatcggaggtc |
24126803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 11995876 - 11996123
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11995876 |
catgtcgaccaagatctttgagtcactatccactataagatgagtggtattctccctccacgccatgtccaaacctaggtacatgccccacatttcagca |
11995975 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
11995976 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaagagtaccaaatc |
11996075 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
11996076 |
ccttccaagcaccatcacaattaagcttaacccaaccaatcagaggtc |
11996123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 13186949 - 13186800
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
13186949 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagccatgtccaaacccaaatatagtccccacatctcagca |
13186850 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
13186849 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
13186800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 16472859 - 16472801
Alignment:
| Q |
24 |
gtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggt |
82 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||||| | |||||||||||||| |||| |
|
|
| T |
16472859 |
gtcactcttcatcataagatgagtggtgttctccctctaggccatgtccaaaccaaggt |
16472801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 6293982 - 6293735
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6293982 |
catgtcgaccaaaatctttgagtcactctccactataagatgagtggtattctccctccacgccatgtccaaaccaaggtacatgccccacatttcagca |
6293883 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6293882 |
tgaaaagcatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccataccctgcaagagtaccagatc |
6293783 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6293782 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
6293735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 16854915 - 16854668
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16854915 |
catgtcgaccaagatctttgagtcactctccactataagatgagtggtattctccatccacgccatgtccaaacctaggtacatgccccacatttcagca |
16854816 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||| |
|
|
| T |
16854815 |
tgaaaagcatcacacattccaatcttcttgaagcagcctttgatccatctaccatcagagtctcgaagaagccctctacaccctgcaagaataccagatc |
16854716 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
| |||||| ||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
16854715 |
cattccaaacaccatcacaattaagcttaaccaaaccaattggaggtc |
16854668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 28705957 - 28705710
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||||| || |
|
|
| T |
28705957 |
catgtcgaccaagatctttgattcactctccactataagatgagtggtattctccctccacgccaagtccaaacccatgtacatgccccacatttcaaca |
28705858 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || || ||||||||||| |
|
|
| T |
28705857 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccttcagagtctcgaaaaagccctccacactttgtaagagtaccagatc |
28705758 |
T |
|
| Q |
203 |
ccttccaagcaccatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
28705757 |
ccttccaagcaccatcaaaattaagcttaacccaaccaatctgaggtc |
28705710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 5308703 - 5308554
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
5308703 |
catgtcgatcaaaatctttgattcactttccactataagatgagagtaatgttccctccaagccatgtccaaacccaaatatagtccccacatctcagca |
5308604 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
5308603 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
5308554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 23949759 - 23949610
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
23949759 |
catgtcgatcaaaatctttgaatcactttccactataagatgagattaatgttccctccaagccatgtccaaacccaaatatagtccccacatctcagca |
23949660 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
23949659 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
23949610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 23085048 - 23085197
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||| | ||||| |||||||||||||||| | || |||||||| |||||||||| ||| | || | |||||||| |||||| |
|
|
| T |
23085048 |
catgtcgatcaaaatctttaaatcactttccactataagatgagagcaatgttccctccaagccatgtccagacccaaatatagaccccacatctcagca |
23085147 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
23085148 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
23085197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 5555954 - 5555854
Alignment:
| Q |
16 |
atctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
115 |
Q |
| |
|
|||||| |||| |||||||| ||||||| ||||||| ||||||| | |||| ||||||| || || | |||||| ||||||||||||||| |||||| |
|
|
| T |
5555954 |
atctttaagtctctctccacaataagataagtggtactctccctttacaccatatccaaacttaaatagaggccccatatttcagcatgaaaagcatcac |
5555855 |
T |
|
| Q |
116 |
a |
116 |
Q |
| |
|
| |
|
|
| T |
5555854 |
a |
5555854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 46011436 - 46011477
Alignment:
| Q |
65 |
ccatgtccaaacctaggtacatgccccacatttcagcatgaa |
106 |
Q |
| |
|
|||| |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
46011436 |
ccatatccaaaccaaggtacatgccccacaattcagcatgaa |
46011477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 50952705 - 50952833
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| ||||||||||||| || | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
50952705 |
catgtcgatcaaaatctttgaatcactttccactataagattagagtaatgttccctccaagccatgtccaaacccaaatatagcccccacatctcagca |
50952804 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttctt |
131 |
Q |
| |
|
|| || ||||||| |||||||||||| |
|
|
| T |
50952805 |
tgtaaggcatcacaagctccaatcttctt |
50952833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 1182444 - 1182207
Alignment:
| Q |
13 |
aatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacat |
112 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1182444 |
aatatcttttagtcactctccactgtaagatgagtggtgttctacctccacgacatgtccaaacctaggtacatgccccacatttcagcatgaaaaacat |
1182345 |
T |
|
| Q |
113 |
cacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatcccttccaagc |
212 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||| |||| |||||| ||||||||| |
|
|
| T |
1182344 |
cacacattctaatctttatgaagtagcctttgattcatctgccatcagagtcccgaagaagccatccacaccctccaagagtatcagatctcttccaagc |
1182245 |
T |
|
| Q |
213 |
accatcacaattaagcttaacccaaccaaacggaggtc |
250 |
Q |
| |
|
|| |||||||||||||||||| ||||||| | |||||| |
|
|
| T |
1182244 |
acaatcacaattaagcttaacacaaccaatcagaggtc |
1182207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 43328855 - 43329051
Alignment:
| Q |
16 |
atctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcac |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43328855 |
atctttgagtcactctccactataagatgagtggtattctccctccacgctatgtccaaacctaggtacatgccccacatttcagcatgaaaagcatcac |
43328954 |
T |
|
| Q |
116 |
acattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccacaccctgcaaaagtaccagatcccttccaagca |
213 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
43328955 |
acattccaatattcttgaagtagcctttgatccatctatcatcaga-tctcgaagaagccctccacaccctgcaagagtgccagatcccttccaagca |
43329051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 30778134 - 30778279
Alignment:
| Q |
83 |
acatgccccacatttcagcatgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatctgccatcagagtctcgaagaagccctccaca |
182 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| | | |
|
|
| T |
30778134 |
acatgccccatatttcgacatgaaat-catcacacattccaatcttcttgaattagtctttgatccatctgccatcagagttccgaagaagccct-tata |
30778231 |
T |
|
| Q |
183 |
ccctgcaaaagtaccagatcccttccaagcaccatcacaattaagctt |
230 |
Q |
| |
|
|||||||| |||| || |||| ||| |||||||||||||||||||||| |
|
|
| T |
30778232 |
ccctgcaagagtatcatatccgttctaagcaccatcacaattaagctt |
30778279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 41420633 - 41420766
Alignment:
| Q |
19 |
tttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcacaca |
118 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| || | ||||||||| |||||||| |||||||| |
|
|
| T |
41420633 |
tttgagtcgctcttcactataagatgagtggcgttctccctccactccatgtccaaacctaggtatgtgtctcacatttcaacatgaaaagcatcacact |
41420732 |
T |
|
| Q |
119 |
ttccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|||||||||| |||||| | ||||||||||||| |
|
|
| T |
41420733 |
ttccaatcttaatgaagtgggctttgatccatct |
41420766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 37503055 - 37502963
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacat |
95 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
37503055 |
catgtcgaccaaaatctttgagtcactctccactataaaatgagtgatattctccctcctcgccaagtccaaacctaggtatatgccccacat |
37502963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 54346796 - 54346647
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| | || | |||||||| |||||| |
|
|
| T |
54346796 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagccatgtccaaacccaaatatagtccccacatctcagca |
54346697 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
54346696 |
tgtaaggcatcacaagctccaatcttcttagtgtagcctttgatccatct |
54346647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 30775862 - 30775929
Alignment:
| Q |
19 |
tttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatg |
87 |
Q |
| |
|
||||||||||| ||| ||||||||| | || | ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30775862 |
tttgagtcactttccgctataagatta-tgatgttctccctccatgccatgtacaaacctaggtacatg |
30775929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 51841333 - 51841375
Alignment:
| Q |
4 |
atgtcgaataatatctttgagtcactctccactataagatgag |
46 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
51841333 |
atgtcgatcaataactttgagtcactctccactataagatgag |
51841375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 27156305 - 27156454
Alignment:
| Q |
3 |
catgtcgaataatatctttgagtcactctccactataagatgagtggtattctccctccatgccatgtccaaacctaggtacatgccccacatttcagca |
102 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||||||||| | || |||||||| || ||||||||||| | || | || ||||| |||||| |
|
|
| T |
27156305 |
catgtcgatcaaaatctttgaatcactttccactataagatgagagtaatgttccctccaagctatgtccaaacccaaatatagtcctcacatctcagca |
27156404 |
T |
|
| Q |
103 |
tgaaaaacatcacacattccaatcttcttgaagtagcctttgatccatct |
152 |
Q |
| |
|
|| || ||||||| || ||||||||| |||||||||||||||||| |
|
|
| T |
27156405 |
tgtaaggcatcacaagctctaatcttcttagtgtagcctttgatccatct |
27156454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 43215216 - 43215147
Alignment:
| Q |
65 |
ccatgtccaaacctaggtacatgccccacatttcagcatgaaaaacatcacacattccaatcttcttgaa |
134 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||| ||||| |
|
|
| T |
43215216 |
ccatctccaaactaagatacatgccccacatttcagcatgaagtgcatcacaaactccaatctttttgaa |
43215147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 6323101 - 6323143
Alignment:
| Q |
64 |
gccatgtccaaacctaggtacatgccccacatttcagcatgaa |
106 |
Q |
| |
|
||||| |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
6323101 |
gccatatccaaaccaaggtacatgccccacaattcagcatgaa |
6323143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 7424307 - 7424265
Alignment:
| Q |
64 |
gccatgtccaaacctaggtacatgccccacatttcagcatgaa |
106 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
7424307 |
gccatctccaaaccaagatacatgccccacatttcagcatgaa |
7424265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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