View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2527_high_10 (Length: 253)
Name: NF2527_high_10
Description: NF2527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2527_high_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 49511658 - 49511420
Alignment:
| Q |
15 |
aattctgtcacaagtcaagagttgttttcggtgtcaatggcaatgcaagccagaggtatatcttcacatattattttatttccttgttgactatataata |
114 |
Q |
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| T |
49511658 |
aattctgtcacaagtcaagagttgttttctgtgtcaatggcaatgcaagccagaggtatatcttcacatattattttatttccttgttgactatataata |
49511559 |
T |
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| Q |
115 |
tgtaatgtaattatgtaacatacttcattatttttctaatcacataaagttccctttatacattctaacacctaacaacatttaaaaacatttcacagat |
214 |
Q |
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| T |
49511558 |
tgtaatgtaattatgtaacatacttcattatttttctaatcacataaagttccctttatacattctaacacctaacaacatttaaaaacatttcacagat |
49511459 |
T |
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| Q |
215 |
tattgggatgggtctatatgcaacagttgatttagacaa |
253 |
Q |
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| T |
49511458 |
tattgggatgggtctatatgcaacagttgatttagacaa |
49511420 |
T |
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