View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2529_low_3 (Length: 529)

Name: NF2529_low_3
Description: NF2529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2529_low_3
NF2529_low_3
[»] scaffold0476 (1 HSPs)
scaffold0476 (94-520)||(3247-3671)
[»] chr6 (34 HSPs)
chr6 (94-520)||(21565166-21565589)
chr6 (69-470)||(18800091-18800488)
chr6 (141-477)||(23838922-23839256)
chr6 (141-510)||(4477581-4477950)
chr6 (141-392)||(10986263-10986512)
chr6 (61-345)||(9187138-9187420)
chr6 (60-472)||(29614149-29614561)
chr6 (67-315)||(24513002-24513249)
chr6 (60-253)||(12168006-12168200)
chr6 (60-253)||(19286915-19287109)
chr6 (60-253)||(19786087-19786281)
chr6 (60-253)||(19878099-19878293)
chr6 (60-253)||(19883875-19884069)
chr6 (60-253)||(34640206-34640400)
chr6 (60-253)||(34646880-34647074)
chr6 (241-477)||(23057760-23057996)
chr6 (94-221)||(19471590-19471715)
chr6 (61-208)||(31252066-31252212)
chr6 (94-208)||(25396849-25396962)
chr6 (73-181)||(11288962-11289070)
chr6 (73-157)||(19300084-19300167)
chr6 (61-168)||(25470007-25470114)
chr6 (73-134)||(20008286-20008347)
chr6 (73-134)||(9099409-9099470)
chr6 (61-186)||(15458134-15458258)
chr6 (61-186)||(15464729-15464853)
chr6 (73-134)||(29097521-29097582)
chr6 (449-517)||(2286722-2286792)
chr6 (73-134)||(21364816-21364877)
chr6 (73-134)||(23968798-23968859)
chr6 (344-472)||(930098-930225)
chr6 (449-517)||(25598674-25598744)
chr6 (453-517)||(29483386-29483452)
chr6 (140-221)||(2287024-2287103)
[»] chr2 (24 HSPs)
chr2 (94-520)||(23089009-23089432)
chr2 (94-520)||(23101417-23101840)
chr2 (94-520)||(23878686-23879108)
chr2 (94-392)||(26583505-26583801)
chr2 (141-477)||(19661451-19661784)
chr2 (141-477)||(6483442-6483775)
chr2 (141-477)||(6486909-6487242)
chr2 (61-186)||(27208007-27208132)
chr2 (61-316)||(23264786-23265039)
chr2 (61-183)||(27210345-27210467)
chr2 (61-185)||(26884851-26884974)
chr2 (61-219)||(23063328-23063484)
chr2 (73-330)||(23168446-23168701)
chr2 (73-330)||(23579703-23579958)
chr2 (94-221)||(24661252-24661377)
chr2 (85-317)||(21908025-21908257)
chr2 (73-208)||(25181188-25181320)
chr2 (73-134)||(10232-10293)
chr2 (449-517)||(10683890-10683960)
chr2 (449-517)||(13100692-13100762)
chr2 (60-168)||(5706328-5706436)
chr2 (449-517)||(20262184-20262254)
chr2 (409-479)||(23265133-23265202)
chr2 (409-479)||(23280201-23280270)
[»] scaffold0077 (1 HSPs)
scaffold0077 (94-520)||(3576-3999)
[»] chr3 (29 HSPs)
chr3 (94-520)||(55499056-55499484)
chr3 (73-517)||(24192609-24193057)
chr3 (141-479)||(9534052-9534387)
chr3 (141-472)||(23370508-23370837)
chr3 (73-472)||(16801470-16801866)
chr3 (141-517)||(38310755-38311132)
chr3 (141-517)||(20247744-20248113)
chr3 (141-477)||(14762755-14763090)
chr3 (61-252)||(13302462-13302651)
chr3 (61-317)||(17240670-17240923)
chr3 (61-252)||(13313118-13313307)
chr3 (61-252)||(13324010-13324199)
chr3 (60-253)||(24934047-24934241)
chr3 (61-248)||(41455321-41455509)
chr3 (85-318)||(18928911-18929143)
chr3 (60-170)||(10389749-10389859)
chr3 (60-170)||(10414838-10414948)
chr3 (60-170)||(10421508-10421618)
chr3 (73-134)||(17131387-17131448)
chr3 (73-134)||(19235406-19235467)
chr3 (73-133)||(14865501-14865561)
chr3 (449-517)||(12306087-12306157)
chr3 (449-517)||(29543991-29544061)
chr3 (449-517)||(54521787-54521857)
chr3 (449-517)||(16801058-16801128)
chr3 (73-134)||(12033782-12033844)
chr3 (464-517)||(46722544-46722599)
chr3 (464-517)||(8373048-8373104)
chr3 (140-221)||(16800747-16800826)
[»] scaffold0247 (1 HSPs)
scaffold0247 (94-472)||(11019-11394)
[»] scaffold0090 (1 HSPs)
scaffold0090 (61-472)||(17811-18222)
[»] scaffold0025 (1 HSPs)
scaffold0025 (73-517)||(14350-14797)
[»] chr7 (34 HSPs)
chr7 (94-520)||(16676970-16677396)
chr7 (94-520)||(17651206-17651632)
chr7 (141-510)||(16009301-16009669)
chr7 (159-472)||(14422726-14423037)
chr7 (141-510)||(10895753-10896123)
chr7 (141-477)||(15167898-15168233)
chr7 (60-392)||(13743351-13743683)
chr7 (141-472)||(18873083-18873413)
chr7 (60-392)||(13122995-13123329)
chr7 (61-345)||(21231089-21231371)
chr7 (60-392)||(12709924-12710258)
chr7 (61-186)||(14319917-14320042)
chr7 (60-253)||(13007075-13007269)
chr7 (94-219)||(13664608-13664730)
chr7 (60-168)||(11383176-11383284)
chr7 (86-186)||(14230449-14230549)
chr7 (60-244)||(12590871-12591056)
chr7 (94-221)||(46625636-46625761)
chr7 (85-219)||(13679162-13679293)
chr7 (60-168)||(11389653-11389761)
chr7 (73-181)||(16090730-16090837)
chr7 (73-131)||(2966622-2966680)
chr7 (61-186)||(31155038-31155163)
chr7 (94-209)||(20311317-20311431)
chr7 (73-208)||(20906726-20906859)
chr7 (449-517)||(23664080-23664150)
chr7 (449-517)||(29797576-29797646)
chr7 (449-517)||(29801395-29801465)
chr7 (73-181)||(29181402-29181508)
chr7 (73-135)||(3857702-3857764)
chr7 (73-134)||(2465020-2465081)
chr7 (418-479)||(11382866-11382926)
chr7 (418-479)||(11389343-11389403)
chr7 (277-330)||(20311196-20311249)
[»] chr8 (16 HSPs)
chr8 (141-517)||(8727689-8728065)
chr8 (141-472)||(44477347-44477675)
chr8 (141-472)||(44492505-44492833)
chr8 (61-330)||(14056707-14056975)
chr8 (61-330)||(25111620-25111888)
chr8 (200-382)||(27940946-27941127)
chr8 (60-392)||(23866255-23866589)
chr8 (73-338)||(29643522-29643787)
chr8 (60-253)||(17054234-17054428)
chr8 (61-219)||(18613916-18614072)
chr8 (94-221)||(21931374-21931499)
chr8 (73-134)||(24321009-24321070)
chr8 (94-221)||(21840078-21840203)
chr8 (107-186)||(19750240-19750319)
chr8 (449-517)||(364890-364960)
chr8 (409-477)||(23482050-23482117)
[»] chr1 (14 HSPs)
chr1 (141-477)||(20437021-20437355)
chr1 (61-317)||(18712443-18712697)
chr1 (73-157)||(19961825-19961908)
chr1 (73-134)||(20851471-20851532)
chr1 (73-134)||(20858098-20858159)
chr1 (73-134)||(21705931-21705992)
chr1 (73-184)||(20045240-20045350)
chr1 (73-134)||(21710474-21710535)
chr1 (61-219)||(11157735-11157891)
chr1 (141-317)||(32651295-32651471)
chr1 (198-330)||(19663662-19663794)
chr1 (94-135)||(22030085-22030126)
chr1 (443-482)||(10811775-10811814)
chr1 (409-477)||(32651563-32651630)
[»] scaffold0634 (1 HSPs)
scaffold0634 (61-314)||(3305-3558)
[»] scaffold0026 (2 HSPs)
scaffold0026 (60-472)||(11853-12264)
scaffold0026 (141-472)||(111410-111738)
[»] chr5 (29 HSPs)
chr5 (141-479)||(28370050-28370385)
chr5 (141-472)||(38144539-38144867)
chr5 (141-479)||(19512110-19512446)
chr5 (141-472)||(22750864-22751194)
chr5 (61-256)||(34829728-34829922)
chr5 (60-253)||(23528273-23528467)
chr5 (61-318)||(18408100-18408353)
chr5 (73-134)||(19236556-19236617)
chr5 (73-134)||(20772626-20772687)
chr5 (73-134)||(22460812-22460873)
chr5 (73-134)||(22467436-22467497)
chr5 (73-134)||(24930266-24930327)
chr5 (449-517)||(9777130-9777200)
chr5 (73-134)||(20781401-20781462)
chr5 (94-208)||(22439013-22439126)
chr5 (409-479)||(18407939-18408008)
chr5 (81-135)||(28889673-28889727)
chr5 (81-135)||(28896377-28896431)
chr5 (81-135)||(28909625-28909679)
chr5 (81-135)||(28925203-28925257)
chr5 (81-135)||(28931317-28931371)
chr5 (81-135)||(28946020-28946074)
chr5 (464-517)||(24594022-24594077)
chr5 (464-517)||(24668116-24668171)
chr5 (464-517)||(24736711-24736766)
chr5 (464-517)||(24737885-24737940)
chr5 (464-517)||(24750654-24750709)
chr5 (73-131)||(20819876-20819934)
chr5 (409-477)||(23111197-23111264)
[»] scaffold0154 (1 HSPs)
scaffold0154 (61-472)||(30498-30910)
[»] chr4 (20 HSPs)
chr4 (73-391)||(11847761-11848080)
chr4 (61-392)||(8045913-8046244)
chr4 (61-343)||(15407781-15408062)
chr4 (61-208)||(14486303-14486449)
chr4 (73-257)||(27905921-27906103)
chr4 (94-208)||(8834571-8834684)
chr4 (73-181)||(16147123-16147230)
chr4 (449-517)||(15535146-15535216)
chr4 (449-517)||(36038835-36038905)
chr4 (454-517)||(14486695-14486760)
chr4 (60-168)||(53483346-53483454)
chr4 (417-517)||(22724641-22724742)
chr4 (449-517)||(49546902-49546972)
chr4 (94-186)||(13888318-13888410)
chr4 (97-181)||(15307799-15307883)
chr4 (94-153)||(15244891-15244950)
chr4 (30-69)||(25217456-25217495)
chr4 (33-69)||(1969637-1969673)
chr4 (94-186)||(13887461-13887553)
chr4 (464-517)||(41403897-41403953)
[»] scaffold0553 (1 HSPs)
scaffold0553 (141-472)||(10198-10527)
[»] scaffold0544 (1 HSPs)
scaffold0544 (141-472)||(1528-1857)
[»] scaffold1773 (1 HSPs)
scaffold1773 (73-392)||(835-1152)
[»] scaffold0006 (1 HSPs)
scaffold0006 (73-392)||(49836-50153)
[»] scaffold0029 (3 HSPs)
scaffold0029 (60-472)||(111544-111935)
scaffold0029 (73-134)||(91540-91601)
scaffold0029 (73-134)||(97266-97327)
[»] scaffold0020 (1 HSPs)
scaffold0020 (61-345)||(102057-102340)
[»] scaffold0924 (1 HSPs)
scaffold0924 (60-472)||(753-1165)
[»] scaffold0124 (1 HSPs)
scaffold0124 (61-330)||(34421-34688)
[»] scaffold0461 (1 HSPs)
scaffold0461 (61-317)||(165-419)
[»] scaffold0058 (1 HSPs)
scaffold0058 (129-392)||(3-265)
[»] scaffold0117 (2 HSPs)
scaffold0117 (60-389)||(1983-2311)
scaffold0117 (60-389)||(8660-8988)
[»] scaffold0235 (2 HSPs)
scaffold0235 (61-345)||(22722-23005)
scaffold0235 (62-208)||(15201-15346)
[»] scaffold0222 (2 HSPs)
scaffold0222 (61-317)||(16464-16718)
scaffold0222 (409-479)||(16811-16880)
[»] scaffold0107 (1 HSPs)
scaffold0107 (67-330)||(40677-40934)
[»] scaffold0034 (1 HSPs)
scaffold0034 (73-345)||(72939-73210)
[»] scaffold0139 (1 HSPs)
scaffold0139 (61-219)||(15254-15410)
[»] scaffold0004 (3 HSPs)
scaffold0004 (61-208)||(116540-116686)
scaffold0004 (94-221)||(128912-129037)
scaffold0004 (269-317)||(116746-116794)
[»] scaffold0483 (1 HSPs)
scaffold0483 (73-208)||(11275-11408)
[»] scaffold0796 (1 HSPs)
scaffold0796 (73-253)||(1951-2132)
[»] scaffold0261 (2 HSPs)
scaffold0261 (60-186)||(23857-23983)
scaffold0261 (286-345)||(23699-23758)
[»] scaffold0453 (1 HSPs)
scaffold0453 (61-186)||(10837-10962)
[»] scaffold0001 (1 HSPs)
scaffold0001 (61-185)||(493315-493438)
[»] scaffold0456 (6 HSPs)
scaffold0456 (61-179)||(679-797)
scaffold0456 (61-179)||(7824-7942)
scaffold0456 (236-330)||(807-901)
scaffold0456 (236-330)||(7952-8046)
scaffold0456 (408-472)||(921-984)
scaffold0456 (408-472)||(8066-8129)
[»] scaffold0053 (2 HSPs)
scaffold0053 (94-208)||(81480-81593)
scaffold0053 (73-181)||(79783-79890)
[»] scaffold1469 (1 HSPs)
scaffold1469 (73-208)||(1012-1146)
[»] scaffold0138 (1 HSPs)
scaffold0138 (94-181)||(1493-1580)
[»] scaffold0317 (1 HSPs)
scaffold0317 (85-219)||(1055-1186)
[»] scaffold0028 (2 HSPs)
scaffold0028 (94-208)||(1744-1857)
scaffold0028 (94-162)||(65752-65820)
[»] scaffold0232 (1 HSPs)
scaffold0232 (61-186)||(18718-18842)
[»] scaffold0206 (1 HSPs)
scaffold0206 (61-185)||(18264-18386)
[»] scaffold0023 (1 HSPs)
scaffold0023 (81-345)||(135103-135364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (173-343)||(135227-135396)
[»] scaffold0348 (1 HSPs)
scaffold0348 (73-162)||(9015-9103)
[»] scaffold0094 (1 HSPs)
scaffold0094 (92-208)||(51919-52035)
[»] scaffold0085 (1 HSPs)
scaffold0085 (73-208)||(3939-4072)
[»] scaffold2054 (1 HSPs)
scaffold2054 (73-134)||(365-426)
[»] scaffold0169 (1 HSPs)
scaffold0169 (94-206)||(6648-6759)
[»] scaffold0031 (2 HSPs)
scaffold0031 (94-186)||(121578-121670)
scaffold0031 (94-186)||(132455-132547)
[»] scaffold0384 (1 HSPs)
scaffold0384 (85-134)||(16401-16450)
[»] scaffold0335 (1 HSPs)
scaffold0335 (85-186)||(2914-3014)
[»] scaffold0249 (1 HSPs)
scaffold0249 (61-168)||(14197-14304)
[»] scaffold1913 (1 HSPs)
scaffold1913 (479-520)||(892-933)
[»] scaffold0535 (1 HSPs)
scaffold0535 (484-520)||(5157-5193)
[»] scaffold0160 (1 HSPs)
scaffold0160 (484-520)||(15917-15953)
[»] scaffold0131 (1 HSPs)
scaffold0131 (73-157)||(655-738)
[»] scaffold0600 (1 HSPs)
scaffold0600 (122-208)||(438-523)
[»] scaffold0099 (1 HSPs)
scaffold0099 (73-126)||(12595-12650)


Alignment Details
Target: scaffold0476 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 3671 - 3247
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||| |||||||||| ||||| |||||||||| ||| ||||| |||    
T  3671 aaaacccaattttaatcccctgatcgcccaaaacgttttccagcagatgtttacaggtcctatacacaactaggcatctaaaggaa-acacaaacagaca 3573  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3572 tcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagta 3474  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3473 tagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttt 3374  T
Q  394 atcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccagc 493  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3373 atccccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctgaattcaattgcacaatcagc 3274  T
Q  494 tacagcaaaatcgatcccttcttgttc 520  Q
    ||||| |||||||||||||||||||||    
T  3273 tacagtaaaatcgatcccttcttgttc 3247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 319; Significance: 1e-180; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 21565589 - 21565166
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| | |||||||||| ||| ||||| |||    
T  21565589 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagtcatctaaaggaa-acacaaacagaca 21565491  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  21565490 tcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagta 21565392  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21565391 tagattaagatttcattccgaacgtcacattacaacataattaacatgat-cattacccattccccttagaatcatcatcaaaccctaaccctcaatttt 21565293  T
Q  394 atcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccagc 493  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21565292 atcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacctgaattcaattgcacaaccagc 21565193  T
Q  494 tacagcaaaatcgatcccttcttgttc 520  Q
    |||||||||||||||||||||||||||    
T  21565192 tacagcaaaatcgatcccttcttgttc 21565166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 69 - 470
Target Start/End: Original strand, 18800091 - 18800488
Alignment:
Q  69 cgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggc 168  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||| |||||||||||||||||| |||||    
T  18800091 cgggttca-acctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtgtacaggttctatacacaactaggc 18800189  T
Q  169 ctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaa 268  Q
     |||||||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800190 atctaaaggaa-acacaaacagacattaacaacaacaatg-cagatcattccaccatcataccaaacttcatcaattcatccaatcaattatattttcaa 18800287  T
Q  269 tcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatca 368  Q
    |||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||   |||||||    
T  18800288 tcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaattaacatga-tcattactcattccctccagaatca 18800386  T
Q  369 tcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctccct 467  Q
    ||||||||||||||||||||||| |||  | |||    |||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||| ||||    
T  18800387 tcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcaccct 18800485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 141 - 477
Target Start/End: Original strand, 23838922 - 23839256
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||  |||||||||||| |||| ||  ||| ||| ||||||| |||||||||||||||||||||||||| ||||||    
T  23838922 tgtttataggttcattatacaattaggtatctaaaggaacataaaa-catgcatcaacgacaacaaatacagatcattccaccatcatacaaatcttcat 23839020  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  23839021 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacat 23839120  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  23839121 ga-tcaatacccattccccttagaatcatcatcaaaccctaaccctcaa-tttatcttccaaacactatgcaattaggtcaattttcagaaattatagat 23839218  T
Q  439 tatctattaatgagagatagtctctcccttacctgaatt 477  Q
    |||  |||| |||||||||||||| ||||||||| ||||    
T  23839219 tat-gattattgagagatagtctcacccttaccttaatt 23839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 141 - 510
Target Start/End: Original strand, 4477581 - 4477950
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| ||| ||    
T  4477581 tgtttataggttcattatacaattagacatctaaaggaacataaaa-cacgcatcaacaacaacaaatacagatcactccaccatcatacaaatctttat 4477679  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||| ||||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||||  |||||||| ||||| ||||||||||| ||||| |||    
T  4477680 caaatcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattagcat 4477779  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  4477780 ga-tcaatacccattcccctcagaatcatcatcaaaccctaacccacaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 4477877  T
Q  439 tatctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcc 510  Q
    |||  |||| |||||||||||||| ||||||||| ||||||||||| ||| |  ||||||||||||||||||||    
T  4477878 tat-gattattgagagatagtctcacccttaccttaattcaattgcccaaacaaagctacagcaaaatcgatcc 4477950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 141 - 392
Target Start/End: Complemental strand, 10986512 - 10986263
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| || |||||||| ||||||||| |||||||||||||||| ||||||    
T  10986512 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaagaacaacaaatacagatcactccaccatcatacaaatcttcat 10986414  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    |||||||||||||||||  || ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  10986413 caattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacat 10986314  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  10986313 ga-tcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattt 10986263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 61 - 345
Target Start/End: Original strand, 9187138 - 9187420
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||| || |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9187138 aaaacctacgggtccaaacctcttctcgctccaaaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttctatacac 9187237  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||  ||| ||||||||||||| |||||||||| | | |||||||||||||||  ||||| |||||| |||||     
T  9187238 aactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattctagcaatcatacaaaacttctccaatttatccaa-caattc 9187334  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    || ||||| |||| || |||| ||||||||| ||||||||||||| ||||||||||||  | ||||||||| | | ||||||||||    
T  9187335 taatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattc 9187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 60 - 472
Target Start/End: Complemental strand, 29614561 - 29614149
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||| || |||||||||||| ||||| |    
T  29614561 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccagcagatgtttacaggtcctatata 29614462  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    ||| |||||  ||||||| ||||| ||| ||  ||| |||||||||| |||||||| |||||||||||||||| || |||||||||||||||||||| |     
T  29614461 caactaggcattctaaagaaacac-aaatcagccatcaacaacaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattc 29614363  T
Q  259 at-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttc 356  Q
    || | |||||||||| || |||| ||| |||||  | ||||||||  |||||||| |||||  || ||||| | ||||||||||| |||||||||| |||    
T  29614362 ataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacat-tcaatacaagagaattaacatga-tcattacccatttc 29614265  T
Q  357 ccctaagaatcatcatcaaaccctaaccctcaattt-tatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagaga 455  Q
    || | | ||||||||||||||||||||||||||||| | |   |||  | | |||| ||||||||||||| ||||||| | |||||  |||| |||||||    
T  29614264 ccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattat-gattattgagaga 29614166  T
Q  456 tagtctctcccttacct 472  Q
    ||||||| |||||||||    
T  29614165 tagtctcacccttacct 29614149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 67 - 315
Target Start/End: Complemental strand, 24513249 - 24513002
Alignment:
Q  67 tacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattag 166  Q
    |||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||    
T  24513249 tacgggttca-acctcttctcactccaaaaacctaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcattacacaactag 24513151  T
Q  167 gcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaattatatttt 265  Q
     | ||||||||||||| ||||||  ||| ||||||||||||| |||||||||| | | |||||||||||||||  ||||| ||||||  |||| || |||    
T  24513150 acatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaattt 24513053  T
Q  266 caatc-aatttgtgatgacaacaacagtatagattaagaattcattctgaa 315  Q
    || || || || |||| ||||||||| ||||||| ||||| ||||||||||    
T  24513052 cattcaaaattctgatcacaacaacattatagatcaagaaatcattctgaa 24513002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 12168006 - 12168200
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  12168006 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 12168105  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  12168106 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 12168200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 19286915 - 19287109
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  19286915 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 19287014  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  19287015 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 19287109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 19786281 - 19786087
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  19786281 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 19786182  T
Q  160 caattaggcctctaaagg-aacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| ||||| |   |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  19786181 caactaggcattacaaggaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 19786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 19878099 - 19878293
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  19878099 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 19878198  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  19878199 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 19878293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 19883875 - 19884069
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  19883875 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 19883974  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  19883975 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 19884069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 34640400 - 34640206
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||| ||||||||||||||||| | | || ||||||||||| |||||||| ||||||||||| |||||||||||| ||||| |    
T  34640400 caaaacctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggtcctatata 34640301  T
Q  160 caattaggcctc-taaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| ||||| || ||||| ||||| ||  ||| ||  ||||||||||||||||| ||||||| |||||||| ||||   |||||||||||| ||||    
T  34640300 caactaggcatcataaagaaacac-aattcaaccaacaacaacaacaattacagaatcattctaccatcattcaaataatcatcaattcatacaat 34640206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 34647074 - 34646880
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||| ||||||||||||||||| | | || ||||||||||| |||||||| ||||||||||| |||||||||||| ||||| |    
T  34647074 caaaacctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggtcctatata 34646975  T
Q  160 caattaggcctc-taaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| ||||| || ||||| ||||| ||  ||| ||  ||||||||||||||||| ||||||| |||||||| ||||   |||||||||||| ||||    
T  34646974 caactaggcatcataaagaaacac-aattcaaccaacaacaacaacaattacagaatcattctaccatcattcaaataatcatcaattcatacaat 34646880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 241 - 477
Target Start/End: Original strand, 23057760 - 23057996
Alignment:
Q  241 caattcatccaatcaattata-ttttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | ||| |||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| | ||||| | |    
T  23057860 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcaggaattataga 23057957  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||  ||||  ||||||||||||| ||||||||| ||||    
T  23057958 ttat-gattatcgagagatagtctcacccttaccttaatt 23057996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 19471715 - 19471590
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||| |||| ||||| |||| |||||||  |||||| |||    
T  19471715 aaaacccaattttaatcccctgatcacccaaaatgttttccaacagatgtttacagattcaatatacaactaggcatctataggaaca-taaaacataca 19471617  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  19471616 tcaacaacaacaatt-cagctcattcca 19471590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 31252066 - 31252212
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||  |||||||||||||||  |||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||    
T  31252066 aaaacttacgatttcagacttctctccactccaaaaacccagttttaatcccctgatcacccaaaacattttccagcgattgtttacaggttctatacac 31252165  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    || ||| | || ||||||||||  |||||  ||||||||||| |||||    
T  31252166 aactagtcatcgaaaggaacac-gaaacatgcattaacaacatcaatt 31252212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 25396849 - 25396962
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||  ||||||  ||    
T  25396849 aaaacccaattttaatttcctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaaca-taaaacaggca 25396947  T
Q  194 ttaacaacaacaatt 208  Q
    | |||||||||||||    
T  25396948 tcaacaacaacaatt 25396962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 11289070 - 11288962
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaacttt-aatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctc 171  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | | ||||||||| || |||||||||| ||||| ||    
T  11289070 ttcagacttctcctcactccaaaaacccaatttttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatacacaactaggcatc 11288972  T
Q  172 taaaggaaca 181  Q
     |||||||||    
T  11288971 aaaaggaaca 11288962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 19300167 - 19300084
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctata 157  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  19300167 ttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaacgttttccagcaaatgtttacaggtcctata 19300084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 25470114 - 25470007
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||| |||||||  || |||||||||||||||| | |||||||||||| |||||||||| ||||||||||| |||||||||||| ||||| ||    
T  25470114 aaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgttcacccaaaatgttttccaacagatgtttacaggtcctatatac 25470015  T
Q  161 aattaggc 168  Q
    || |||||    
T  25470014 aactaggc 25470007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 20008347 - 20008286
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20008347 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 20008286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 9099470 - 9099409
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  9099470 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttcc 9099409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 15458134 - 15458258
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||  |||||||||||||||| |||||||||| |||| |||||||||||||||| |   ||||||||||   |||||||    
T  15458134 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 15458233  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    || ||||| || ||| ||||||||||    
T  15458234 aactaggcatc-aaaagaacacaaaa 15458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 15464729 - 15464853
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||  |||||||||||||||| |||||||||| |||| |||||||||||||||| |   ||||||||||   |||||||    
T  15464729 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 15464828  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    || ||||| || ||| ||||||||||    
T  15464829 aactaggcatc-aaaagaacacaaaa 15464853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 29097521 - 29097582
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  29097521 ttcagacttctcctcactccaaaaactcaattttaatcccctgatcacccaaaaggttttcc 29097582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 2286792 - 2286722
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||| ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  2286792 tgagagttagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 2286722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 21364877 - 21364816
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||   ||||||||||||||||||    
T  21364877 ttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc 21364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 23968859 - 23968798
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||   ||||||||||||||||||    
T  23968859 ttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc 23968798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 472
Target Start/End: Complemental strand, 930225 - 930098
Alignment:
Q  344 tcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatct 443  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||  |  ||||    |  ||||||||||||||||| |||| || | |||||      
T  930225 tcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagattat-g 930127  T
Q  444 attaatgagagatagtctctcccttacct 472  Q
    |||| |||||||||||||| |||||||||    
T  930126 attattgagagatagtctcacccttacct 930098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 25598674 - 25598744
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaa--ccagctacagcaaaatcgatcccttcttg 517  Q
    |||||| ||||||| |||||||||||||||||||||||||    ||||||||||||||||||||| |||||    
T  25598674 tgagagttagtctcacccttacctgaattcaattgcacaaagaaagctacagcaaaatcgatcccctcttg 25598744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 517
Target Start/End: Complemental strand, 29483452 - 29483386
Alignment:
Q  453 agatagtctctcccttacctgaattcaattgcacaa--ccagctacagcaaaatcgatcccttcttg 517  Q
    |||| ||||| ||||||||||| |||||||||||||    ||||||||||||||||||||| |||||    
T  29483452 agatcgtctcacccttacctgagttcaattgcacaaataaagctacagcaaaatcgatcccctcttg 29483386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 2287103 - 2287024
Alignment:
Q  140 atgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca 221  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||  ||||||  ||| ||||||||||||| ||| ||||||||    
T  2287103 atgtttataggttcaatatacaattaggcatctaaaggaaca-taaaacatgcatcaacaacaacaatt-cagctcattcca 2287024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 319; Significance: 1e-180; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 23089432 - 23089009
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| | |||||||||| ||| ||||| |||    
T  23089432 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagtcatctaaaggaa-acacaaacagaca 23089334  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  23089333 tcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagta 23089235  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23089234 tagattaagatttcattccgaacgtcacattacaacataattaacatgat-cattacccattccccttagaatcatcatcaaaccctaaccctcaatttt 23089136  T
Q  394 atcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccagc 493  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23089135 atcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacctgaattcaattgcacaaccagc 23089036  T
Q  494 tacagcaaaatcgatcccttcttgttc 520  Q
    |||||||||||||||||||||||||||    
T  23089035 tacagcaaaatcgatcccttcttgttc 23089009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 23101840 - 23101417
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||| ||| ||||| |||    
T  23101840 aaaacccaattttaatcccctgatcacccaaaacgttttccatcagatgtttacaggttctatacacaactaggcatctaaaggaa-acacaaacagaca 23101742  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23101741 tcaacaacaacaat-actgatcattccaccatcatacagaacttcatgaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagta 23101643  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23101642 tagattaagatttcattccgaacgtcacattacaacataattaacatgat-cattacccattcccctcagaatcatcatcaaaccctaaccctcaatttt 23101544  T
Q  394 atcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccagc 493  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  23101543 atcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttaccttaattcaattgcacaaccagc 23101444  T
Q  494 tacagcaaaatcgatcccttcttgttc 520  Q
    |||||||||||||||||||||||||||    
T  23101443 tacagcaaaatcgatcccttcttgttc 23101417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 94 - 520
Target Start/End: Original strand, 23878686 - 23879108
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||| |||||  ||||||||||| ||| || |||||||||||||||||||| || ||||| |||||||||| ||| ||||| |||    
T  23878686 aaaacccaattttaatcccttgatcgtccaaaacgtttcccagcagatgtttacaggttctatacaaaactaggcatctaaaggaa-acacaaacagaca 23878784  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  23878785 tcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattctattttcaatcaatttatgatcacaacaacagta 23878883  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcatta-cccattcccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||| | ||||||||||||||||||    
T  23878884 tagattaagatttcattctgaacatcacattacaacataattaacatga-tcattaccccattcccctcagaatcatcaac-aaccctaaccctcaattt 23878981  T
Q  393 tatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccag 492  Q
     ||||||||||| ||||||||||||||||||| |||||||| |||| || |||||||||||||||||||| |||||||||||| ||||||||||||| ||    
T  23878982 aatcctcaaggttaagcaattaggtcaatttttcgaaattatatataat-tattaatgagagatagtctcacccttacctgaactcaattgcacaacaag 23879080  T
Q  493 ctacagcaaaatcgatcccttcttgttc 520  Q
    ||||||||||||||||||||||||||||    
T  23879081 ctacagcaaaatcgatcccttcttgttc 23879108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 94 - 392
Target Start/End: Original strand, 26583505 - 26583801
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||| ||| ||||| |||    
T  26583505 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactaggcatctaaaggaa-acacaaacagaca 26583603  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaa-tcaatttgtgatgacaacaacagt 292  Q
    | ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||| || || ||| |||| ||||||| ||| ||||| |    
T  26583604 tcaacaacaacaa-tacagatcattccaccatcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaacatt 26583702  T
Q  293 atagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    |||||||| |||||||||||||||||||| |||||||| | ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  26583703 atagattaggaattcattctgaacatcactttacaacatatttaacatga-tcattaccctttcccctcagaatcatcatcaagccctaaccctcaattt 26583801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 141 - 477
Target Start/End: Complemental strand, 19661784 - 19661451
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  19661784 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcat 19661686  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  19661685 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacat 19661586  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacatatt 439  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |||    
T  19661585 ga-tcaatacccattcccctcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 19661488  T
Q  440 atctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||  ||||  |||||| |||||| ||||||||| ||||    
T  19661487 at-gattatcgagagaaagtctcacccttaccttaatt 19661451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 141 - 477
Target Start/End: Original strand, 6483442 - 6483775
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  6483442 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 6483540  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    |||||||||| |||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||||| |||||||||    
T  6483541 caattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 6483640  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  6483641 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 6483739  T
Q  441 tctattaatgagagatagtctctcccttacctgaatt 477  Q
    |  |||| |||||||||||||| ||||||||| ||||    
T  6483740 t-gattattgagagatagtctcacccttaccttaatt 6483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 141 - 477
Target Start/End: Original strand, 6486909 - 6487242
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  6486909 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 6487007  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    |||||||||| |||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||||| |||||||||    
T  6487008 caattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 6487107  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  6487108 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 6487206  T
Q  441 tctattaatgagagatagtctctcccttacctgaatt 477  Q
    |  |||| |||||||||||||| ||||||||| ||||    
T  6487207 t-gattattgagagatagtctcacccttaccttaatt 6487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 27208132 - 27208007
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  27208132 aaaacttacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacac 27208033  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    || ||||| || ||||||||||||||    
T  27208032 aactaggcatcgaaaggaacacaaaa 27208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 61 - 316
Target Start/End: Original strand, 23264786 - 23265039
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||||||  | |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | |||||||||| | ||||||    
T  23264786 aaaacctacgggttcagaccctttctcactccaaaa-cccaattttaatcccctgatcacccaaaatgttttccaacagaagtttacaggtccaatacac 23264884  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| |||||||||||||||||||| |||||||||| ||||||| ||||| |||| | | ||   || ||||||| ||||||   |||| |||||     
T  23264885 aactaggcatctaaaggaacacaaaaacagacattaacaataacaatt-cagattattctagcaatttcaccaaacttc-tcaattttcccaaccaattc 23264982  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaac 316  Q
    || | ||  |||| || |||| ||||||||| ||||||||||||| |||||||||||    
T  23264983 taatctccctcaaattctgatcacaacaacattatagattaagaaatcattctgaac 23265039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 27210467 - 27210345
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  27210467 aaaacttacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacac 27210368  T
Q  161 aattaggcctctaaaggaacaca 183  Q
    || ||||| || |||||||||||    
T  27210367 aactaggcatcgaaaggaacaca 27210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 26884851 - 26884974
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  26884851 aaaacttacgatttcagacttctcttcactccaaaaatccaattttaatcccctgatcacccaaaacgttttccagca-atgtttacaggtcctatacac 26884949  T
Q  161 aattaggcctctaaaggaacacaaa 185  Q
    || |||||  | |||||||||||||    
T  26884950 aactaggcaccgaaaggaacacaaa 26884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 23063328 - 23063484
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    ||||| |||||||| || |||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||     
T  23063328 aaaacctacgggtttcaaaccttttctcactccaaaa-cccaattttaatcccctgatcacccaaaacaatttccaacagatgtttacaggttcaatact 23063426  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc 219  Q
     || ||||| ||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  23063427 taactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattc 23063484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 330
Target Start/End: Complemental strand, 23168701 - 23168446
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||| || |||||||||| |||||  |     
T  23168701 ttcagacttctcatcactccaaaatcccaattttaatcccctgatcacccaaaacgttttccagca-atgtttacaagtcctatacacaactaggcaccg 23168603  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattcc-accatcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    |||||||||| |||| |  ||||||||||| ||| | ||  ||||||| || ||||||| ||||||  ||||||||| |||||||   || ||||| ||     
T  23168602 aaaggaacac-aaaatatgcattaacaacatcaa-tccaactcattccaacaatcatacgaaacttgctcaattcattcaatcaaccctaatttcattcc 23168505  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    | ||  ||  | | || || ||||||||||||| |||| |||||||||| |||||||||    
T  23168504 aattccgaacatagcatcattatagattaagaaatcatactgaacatcaaattacaaca 23168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 330
Target Start/End: Complemental strand, 23579958 - 23579703
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||| || |||||||||| |||||  |     
T  23579958 ttcagacttctcatcactccaaaatcccaattttaatcccctgatcacccaaaacgttttccagca-atgtttacaagtcctatacacaactaggcaccg 23579860  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattcc-accatcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    |||||||||| |||| |  ||||||||||| ||| | ||  ||||||| || ||||||| ||||||  ||||||||| |||||||   || ||||| ||     
T  23579859 aaaggaacac-aaaatatgcattaacaacatcaa-tccaactcattccaacaatcatacgaaacttgctcaattcattcaatcaaccctaatttcattcc 23579762  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    | ||  ||  | | || || ||||||||||||| |||| |||||||||| |||||||||    
T  23579761 aattccgaacatagcatcattatagattaagaaatcatactgaacatcaaattacaaca 23579703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 24661252 - 24661377
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||| ||| |||| ||||  ||||||||||||  |||||| |||    
T  24661252 aaaacccaattttaatcccctgatcaaccaaaacgtttttcaacagatgtttacaggttcaatatacaactaggtatctaaaggaaca-taaaacataca 24661350  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  24661351 tcaacaacaacaatt-cagttcattcca 24661377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 317
Target Start/End: Original strand, 21908025 - 21908257
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaa 184  Q
    |||||||||||| ||||| |||||||||||||||||||| || |||| | |||| |||||||||| | | |||||||| ||||| ||||||||||||| |    
T  21908025 ctcactccaaaa-cccaattttaatcccctgatcacccagaatgtttcctaacagatgtttacagttccaatacacaactaggcatctaaaggaacac-a 21908122  T
Q  185 aaacaaacattaacaacaacaattacagatcattccacc--atcatacaaaacttcatcaattcat-ccaatcaattatattttcaatcaatttgtgatg 281  Q
    ||| |  |||||||| ||| |||| |||||||||| | |  |||||||||||| ||  |||||  | |||| ||||| || | |   ||||||| ||||     
T  21908123 aaataggcattaacagcaaaaatt-cagatcattctagcaaatcatacaaaacctctccaatttttcccaaccaattctaatctacctcaatttctgatc 21908221  T
Q  282 acaacaacagtatagattaagaattcattctgaaca 317  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  21908222 acaacaacattatagattaagaaatcattctgaaca 21908257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 25181320 - 25181188
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||   | ||||||||| || ||||||||||  || | ||     
T  25181320 ttcagacttctcctcacttcaaaaacccaattttaatcccctgatcacccaaaacgttttcc-tgaaatgtttacaagtcctatacacaaccagacatc- 25181223  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
     |||||||| ||||  ||||||||||||||||||||    
T  25181222 -aaggaacaaaaaactaaacattaacaacaacaatt 25181188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 10232 - 10293
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10232 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 10683960 - 10683890
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  10683960 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 10683890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 13100762 - 13100692
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  13100762 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 13100692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 5706436 - 5706328
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||| || |||||||||||||| | | |||||||||||||| ||||||||  | |||||||| |||||||||||| | ||| |    
T  5706436 caaaacctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggtccaatata 5706337  T
Q  160 caattaggc 168  Q
    ||| |||||    
T  5706336 caactaggc 5706328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 20262184 - 20262254
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||| ||||||||||||| |||||    
T  20262184 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacaacaaaatcgatcccctcttg 20262254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 23265133 - 23265202
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||||    
T  23265133 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaattca 23265202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 23280201 - 23280270
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||||    
T  23280201 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaattca 23280270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 3999 - 3576
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||| ||| ||||| |||    
T  3999 aaaacccaatttcaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactaggcatctaaaggaa-acacaaacagaca 3901  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  3900 tcaacaacaacaat-acaaatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagta 3802  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  3801 tagattaagatttcattccgaacatcacattacaacataattaacatgat-cattacccatccccctcagaatcatcatcaaaccctaaccctcaatttt 3703  T
Q  394 atcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaaccagc 493  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||     
T  3702 atcctcaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctgaattcaattgcacaatcagt 3603  T
Q  494 tacagcaaaatcgatcccttcttgttc 520  Q
    ||||| |||||||||||||||||||||    
T  3602 tacagtaaaatcgatcccttcttgttc 3576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 94 - 520
Target Start/End: Complemental strand, 55499484 - 55499056
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattag----gcctctaaaggaacacaaaaaca 189  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||    || |||||||||| ||| |||||    
T  55499484 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagctatgcatctaaaggaa-acacaaaca 55499386  T
Q  190 aacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaac 289  Q
     |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  55499385 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttgatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaac 55499287  T
Q  290 agtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaa 389  Q
     ||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  55499286 tgtatagattaagatttcattccgaacatcacattacaacataattaacatga-tcattacccattcccctcagaatcatcatcaaaccctaaccctcaa 55499188  T
Q  390 ttttatcctcaaggtgaagcaattaggtcaatttt-ccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaa 488  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55499187 ttttatcctcaaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacctgaattcaattgcacaa 55499088  T
Q  489 ccagctacagcaaaatcgatcccttcttgttc 520  Q
    ||||||||||||||||||||||||||||||||    
T  55499087 ccagctacagcaaaatcgatcccttcttgttc 55499056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 73 - 517
Target Start/End: Original strand, 24192609 - 24193057
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||| ||||| |||| ||||| |||    
T  24192609 ttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttacaggtcctatatacaactaggcatct 24192708  T
Q  173 aaagg-aacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    ||||| ||||| ||||||  ||| |||||||| || ||||||||||||||||||||||| ||  |||||||||| ||||||||||| |||||||||||||    
T  24192709 aaaggaaacac-aaaacagccatcaacaacaagaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattttcaatca 24192807  T
Q  272 atttgtga-tgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctaagaatcat 369  Q
     ||| ||| | ||| |||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| | ||||||||    
T  24192808 gtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacagaattaacatga-tcattacccatttcccttcagaatcat 24192906  T
Q  370 catcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctccct 467  Q
    |||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | |||||  |||| |||||||||||||| ||||    
T  24192907 catcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcaccct 24193004  T
Q  468 tacct-gaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||| || ||||||||||||| |  ||||||||||||||||||||| |||||    
T  24193005 tacctggatttcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 24193057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 141 - 479
Target Start/End: Original strand, 9534052 - 9534387
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  9534052 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 9534150  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| || ||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  9534151 caattcatccaatcaatcataatttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 9534250  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| |||||||||| || |||||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  9534251 ga-tcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 9534349  T
Q  441 tctattaatgagagatagtctctcccttacctgaattca 479  Q
    |  |||| |||||||||||||| ||||||||| ||||||    
T  9534350 t-gattattgagagatagtctcacccttaccttaattca 9534387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 141 - 472
Target Start/End: Complemental strand, 23370837 - 23370508
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || ||||| || | |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  23370837 tgtttataggttcattatacaataagacatctaaaggaacataaaa-cacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcat 23370739  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  23370738 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 23370639  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  23370638 ga-tcaatacccattcccctcagaatcatcatcaaaccctaacccacaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 23370541  T
Q  439 tatctattaatgagagatagtctctcccttacct 472  Q
    |||  |||| |||||||||||| | |||||||||    
T  23370540 tat-gattattgagagatagtcccacccttacct 23370508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 73 - 472
Target Start/End: Complemental strand, 16801866 - 16801470
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||| || |||||||||||||||||| |||| || || |||    
T  16801866 ttcatacctcttctcactccaaaaacccaactttaatcccctgatcacttaaaatgttttccagcagatgtttacaggttctatatacaactaagcatct 16801767  T
Q  173 -aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
     ||||| | || ||||||  ||| ||||||||||||| ||||| |||| || |||||||||||||||| |||||||||||  ||||| ||  |||| |||    
T  16801766 aaaagggatac-aaaacaggcatcaacaacaacaatt-cagattattctacaatcatacaaaacttcaccaattcatccatccaattctaaattcattca 16801669  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattac-ccattcccctaagaatcatc 370  Q
    | ||||||| ||||||  | ||||| ||||||||||||||| |||||||||||||| || | ||||||||| ||||||| |||||| ||| | |||||||    
T  16801668 aattgtgatcacaacattattataggttaagaattcattctaaacatcacattacagcatatttaacatga-tcattacaccattctcctcaaaatcatc 16801570  T
Q  371 atcaaaccctaaccctcaattttatcctc-aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctccctta 469  Q
    ||| |||||||||| ||||||||||| || || |  ||||||| |||||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||    
T  16801569 atc-aaccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatata-tat-gattattgagagatagtctcaccctta 16801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 141 - 517
Target Start/End: Complemental strand, 38311132 - 38310755
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||| ||||||| || |||||    
T  38311132 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccttcatacacaaattcat 38311034  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    | ||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  38311033 ccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 38310934  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||| ||| ||||||| | |    
T  38310933 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatattcagaaattataga 38310836  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||  ||||  ||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  38310835 ttat-gattatcgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 38310755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 141 - 517
Target Start/End: Complemental strand, 20248113 - 20247744
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| ||          
T  20248113 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaa------ 20248021  T
Q  241 caattcatccaatcaattata-ttttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
      ||||||||||||| | ||| |||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| ||||||||||    
T  20248020 --attcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaaca 20247923  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |    
T  20247922 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattataga 20247825  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||  |||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  20247824 ttat-gattattgagagatagtctcacccttacctgaattcaattgcacaaacgaagctacagcaaaatcgatcccctcttg 20247744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 141 - 477
Target Start/End: Complemental strand, 14763090 - 14762755
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| ||||||||||||||||||||| |||||||||||||| || |||||    
T  14763090 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcactccaccatcatacacaaattcat 14762992  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  14762991 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 14762892  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |    
T  14762891 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattataga 14762794  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||  ||||  ||||||||||||| ||||||||| ||||    
T  14762793 ttat-gattatcgagagatagtctcacccttaccttaatt 14762755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 61 - 252
Target Start/End: Complemental strand, 13302651 - 13302462
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||    
T  13302651 aaaacctacgggtttagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaaatgtttacaggtcctatatac 13302552  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaa 252  Q
    || ||||| ||||||||||||| ||||||  ||| ||||||||||||| |||| ||||| | | |||||||||||||||  ||||||||||||    
T  13302551 aactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagagcattctagcaatcatacaaaacttc-ccaattcatccaa 13302462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 317
Target Start/End: Complemental strand, 17240923 - 17240670
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  17240923 aaaacctacgggttcaaacctcttctcactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacac 17240825  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||  | ||||||  ||| ||||||||||||| |||||||||| | | ||||||| |||||||  ||||| ||||||  |||      
T  17240824 aactaggcatctaaaggaattc-aaaacaggcatcaacaacaacaatt-cagatcattctagcaatcatac-aaacttctccaatttatccaacaaatcc 17240728  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
    || ||||  |||| || |||| ||| ||||| |||||||||| || ||||| ||||||    
T  17240727 taatttccttcaaattctgatcacagcaacattatagattaataaatcattttgaaca 17240670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 61 - 252
Target Start/End: Complemental strand, 13313307 - 13313118
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||| ||||| ||    
T  13313307 aaaacctacgggtttagacctcttctcactccaaaaacccaattttaatcccctgatgacccaaaacgttttccagcaaatgtttacaggtcctatatac 13313208  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaa 252  Q
    || || || ||||||||||||| ||||||  ||| ||||||||||||| |||| ||||| | | |||||||||||||||  ||||||||||||    
T  13313207 aactatgcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagagcattctagcaatcatacaaaacttc-ccaattcatccaa 13313118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 61 - 252
Target Start/End: Complemental strand, 13324199 - 13324010
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| || ||||||| |||| ||||| ||    
T  13324199 aaaacctacgggttcagacctcttctcactccaaaaacccatatttaatcccctgatcacccaaaacgttttccagcaaatgtttataggtgctatatac 13324100  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaa 252  Q
    ||  |||| ||||||||||||| ||||||  ||| ||||||||||||| |||| ||||| | | |||||||||||||||  ||||||||||||    
T  13324099 aaccaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagagcattctagcaatcatacaaaacttc-ccaattcatccaa 13324010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 24934241 - 24934047
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||  || |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||| || ||||| |    
T  24934241 caaaacatacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacatgtcctatata 24934142  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| ||||| |  ||||| ||||| ||  ||| ||| |||| |||||||||||| ||||||| |||||||||||||  ||||||||||||| ||||    
T  24934141 caactaggcacaataaagaaacac-aattcaaccatcaacagcaacaattacagaatcattctaccatcatacaaatattcatcaattcatacaat 24934047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 61 - 248
Target Start/End: Complemental strand, 41455509 - 41455321
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||| ||    
T  41455509 aaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccgaaatgttttccaacagatgtttacaggtcctatatac 41455410  T
Q  161 aattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcat 248  Q
    || |||||  | ||||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| | || |  ||||||||||||    
T  41455409 aactaggcattataaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacataatatctcatcaattcat 41455321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 318
Target Start/End: Original strand, 18928911 - 18929143
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaa 184  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||| | |||| |||||||||||| | |||||||| ||||| ||||||||||||| |    
T  18928911 ctcactccaaaa-cacaattttaatcccctgatcacccaaaatgtttcctaacagatgtttacaggtccaatacacaactaggcatctaaaggaacac-a 18929008  T
Q  185 aaacaaacattaacaacaacaattacagatcattccacc--atcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatga 282  Q
    |||||  |||||||||||| |||| |||||||||| | |  |||||||||||| ||  |||||   |||| ||||| || | |   ||||||| |||| |    
T  18929009 aaacaggcattaacaacaataatt-cagatcattctagcaaatcatacaaaacctctccaattttcccaaccaattctaatctacctcaatttctgatca 18929107  T
Q  283 caacaacagtatagattaagaattcattctgaacat 318  Q
    || ||||| ||||||||||||| ||||||| |||||    
T  18929108 cagcaacattatagattaagaaatcattctaaacat 18929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 10389859 - 10389749
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||  || |||||||||||||||| | ||||||||||||||||||||||| ||||||||| | |||||||||||| ||||| |    
T  10389859 caaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctatata 10389760  T
Q  160 caattaggcct 170  Q
    ||| |||||||    
T  10389759 caactaggcct 10389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 10414948 - 10414838
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||  || |||||||||||||||| | ||||||||||||||||||||||| ||||||||| | |||||||||||| ||||| |    
T  10414948 caaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctatata 10414849  T
Q  160 caattaggcct 170  Q
    ||| |||||||    
T  10414848 caactaggcct 10414838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 10421618 - 10421508
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||  || |||||||||||||||| | ||||||||||||||||||||||| ||||||||| | |||||||||||| ||||| |    
T  10421618 caaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctatata 10421519  T
Q  160 caattaggcct 170  Q
    ||| |||||||    
T  10421518 caactaggcct 10421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 17131387 - 17131448
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17131387 ttcagacttctcctcactccaaaaatccaattttaatcccctgatcacccaaaacgttttcc 17131448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 19235467 - 19235406
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19235467 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttcc 19235406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 14865501 - 14865561
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttc 133  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14865501 ttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttc 14865561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 12306087 - 12306157
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||| |||||    
T  12306087 tgagagatagtctcacccttaccttaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 12306157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 29544061 - 29543991
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  | ||||||||||||||||||| |||||    
T  29544061 tgagagatagtctcacccttacctgaattcaattgcacaaacaaaactacagcaaaatcgatcccctcttg 29543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 54521787 - 54521857
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||| |||||    
T  54521787 tgagagatagtctcacccttacctgagttcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 54521857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 16801058 - 16801128
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||| ||||||| ||||||||||||||||||||||||| |  ||||||| ||||||||||||| |||||    
T  16801058 tgagagttagtctcacccttacctgaattcaattgcacaaacaaagctacaacaaaatcgatcccctcttg 16801128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 12033844 - 12033782
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaacttt-aatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  12033844 ttcagacttctcctaactccaaaaacccaatttttaatcccatgatcacccaaaacgttttcc 12033782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 46722599 - 46722544
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  46722599 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 46722544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 8373104 - 8373048
Alignment:
Q  464 cccttacctgaattcaattgcacaac---cagctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||||    |||||||||||||| |||||| |||||    
T  8373104 cccttacctgaattcaattgcacaacacaaagctacagcaaaattgatcccctcttg 8373048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 16800747 - 16800826
Alignment:
Q  140 atgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca 221  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||  ||||||  ||| ||||||||||||| ||| ||||||||    
T  16800747 atgtttataggttcaatatacaattaggcatctaaaggaaca-taaaacatgcatcaacaacaacaatt-cagctcattcca 16800826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 94 - 472
Target Start/End: Original strand, 11019 - 11394
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||| |||||||||| ||| |||||  ||    
T  11019 aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttccatatacaactaggcatctaaaggaa-acacaaacagcca 11117  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagta 293  Q
    | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  11118 tcaacaacaacaat-acagatcaatccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagta 11216  T
Q  294 tagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaatttt 393  Q
    | |||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||   |||||||||||||||||||||||||||||| |    
T  11217 tggattaagatttcattttgaacatcacattacaacagaattaacatga-tcattactcattccctccagaatcatcatcaaaccctaaccctcaattct 11315  T
Q  394 atcct-caaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacct 472  Q
    ||  | |||    |||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||| |||||||||    
T  11316 attttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 11394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 61 - 472
Target Start/End: Original strand, 17811 - 18222
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  17811 aaaacttacgggttcagacctctcctccctccaaaaacccaactttaatcccgtgatcacccaaaacgttttccaacagatgtttacaggttctatacac 17910  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat 260  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||       
T  17911 aattaggcctctaaaggaacgcaaaaacaggcattaacaacaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatcca 18010  T
Q  261 attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaa-caaaattaacatgattcattacccattcccc 359  Q
    | ||||||||||||  |||| ||| |||||  |||| |||||  ||||||||| |||||||||||||| || |||||||||||  |||||||  |||||     
T  18011 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgac-cattaccatttcccg 18109  T
Q  360 taagaatcatcatcaaaccctaaccctcaattt--tatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagata 457  Q
    | ||||||||||| ||||| |||||||||||||  | |||| ||| | ||||||||||||||||||||  |||||| | |||||  |||| |||||||||    
T  18110 ttagaatcatcattaaaccttaaccctcaatttattttcctaaagct-aagcaattaggtcaattttcaaaaattatagattatg-attattgagagata 18207  T
Q  458 gtctctcccttacct 472  Q
    ||||| |||||||||    
T  18208 gtctcacccttacct 18222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 73 - 517
Target Start/End: Complemental strand, 14797 - 14350
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||| |||| ||||| |||| ||||  |||    
T  14797 ttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttataggtcctatatacaactaggtatct 14698  T
Q  173 aaaggaacaca-aaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    ||||||| ||| ||||||  ||| ||||||||||| ||||||||||||||||||||||| ||  |||||||||| ||||||||||| |||||||||||||    
T  14697 aaaggaa-acataaaacatccatcaacaacaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattttcaatca 14599  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctaagaatcatc 370  Q
     ||| |||| ||| |||||| ||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||| | |||||||||    
T  14598 gtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaattaacatga-tcattacccatttcccttcagaatcatc 14500  T
Q  371 atcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctccctt 468  Q
    ||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | |||||  |||| |||||||||||||| |||||    
T  14499 atcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcaccctt 14402  T
Q  469 acct-gaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||| || ||||||||||||| |  ||||||||||||||||||||| |||||    
T  14401 acctggatttcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 14350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 9e-96; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 94 - 520
Target Start/End: Original strand, 16676970 - 16677396
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||| ||| || |||||| ||||||||||| |||| ||||| |||||||||| ||| |||||  ||    
T  16676970 aaaacccaattttaatcccctgatcacccaaaacgtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaa-acacaaacaggca 16677068  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaa--tcaatttgtgatgacaacaacag 291  Q
    | ||||||||||||| |||||||||| || | |||||||||| ||| |||||||||||| ||||| || || |||  |||| ||||||| ||| |||||     
T  16677069 tcaacaacaacaatt-cagatcattctacaaccatacaaaacctcaccaattcatccaaccaattctaattacaatttcaa-ttgtgatcacagcaacat 16677166  T
Q  292 tatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattac-ccattcccctaagaatcatcatcaaaccctaaccctcaat 390  Q
    ||||||||| |||||||||||||||||||| |||||||| | ||||||||| ||||||| |||| | ||| | ||||||||||||||||||||||| |||    
T  16677167 tatagattaggaattcattctgaacatcactttacaacatatttaacatga-tcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaat 16677265  T
Q  391 tttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaa 488  Q
    |||||| ||  ||    | |||||||||||||||||  ||||||| | |||||  |||| |||||||||||||| |||||||||||||||||||||||||    
T  16677266 tttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattat-gattattgagagatagtctcacccttacctgaattcaattgcacaa 16677364  T
Q  489 ccagctacagcaaaatcgatcccttcttgttc 520  Q
    ||||||||||||||||||||||||||||||||    
T  16677365 ccagctacagcaaaatcgatcccttcttgttc 16677396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 94 - 520
Target Start/End: Original strand, 17651206 - 17651632
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||||| ||| || |||||| ||||||||||| |||| ||||| |||||||||| ||| |||||  ||    
T  17651206 aaaacccaattttaatcccctgatcacccaaaacgtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaa-acacaaacaggca 17651304  T
Q  194 ttaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaa--tcaatttgtgatgacaacaacag 291  Q
    | ||||||||||||| |||||||||| || | |||||||||| ||| |||||||||||| ||||| || || |||  |||| ||||||| ||| |||||     
T  17651305 tcaacaacaacaatt-cagatcattctacaaccatacaaaacctcaccaattcatccaaccaattctaattacaatttcaa-ttgtgatcacagcaacat 17651402  T
Q  292 tatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattac-ccattcccctaagaatcatcatcaaaccctaaccctcaat 390  Q
    ||||||||| |||||||||||||||||||| |||||||| | ||||||||| ||||||| |||| | ||| | ||||||||||||||||||||||| |||    
T  17651403 tatagattaggaattcattctgaacatcactttacaacatatttaacatga-tcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaat 17651501  T
Q  391 tttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaa 488  Q
    |||||| ||  ||    | |||||||||||||||||  ||||||| | |||||  |||| |||||||||||||| |||||||||||||||||||||||||    
T  17651502 tttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattat-gattattgagagatagtctcacccttacctgaattcaattgcacaa 17651600  T
Q  489 ccagctacagcaaaatcgatcccttcttgttc 520  Q
    ||||||||||||||||||||||||||||||||    
T  17651601 ccagctacagcaaaatcgatcccttcttgttc 17651632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 141 - 510
Target Start/End: Original strand, 16009301 - 16009669
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||| || |||||||||| | |||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  16009301 tgtttataggttctttatacaattaggcatttaaaggaacataaaa-cacgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 16009399  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||| ||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  16009400 caattcatccaatcaatcataatttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 16009499  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacatatt 439  Q
    || ||| ||||||||||||| ||||||||||||||||| |||||| ||| |||||| | |||    | |||||||||||||||||| ||||||| | |||    
T  16009500 ga-tcaatacccattcccctcagaatcatcatcaaaccttaacccacaa-tttatcttccaaaaccatgcaattaggtcaattttcagaaattatagatt 16009597  T
Q  440 atctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcc 510  Q
    ||  |||| |||||||||||||| ||||||||| ||||||||||| ||| |  ||||||||||||||||||||    
T  16009598 at-gattattgagagatagtctcacccttaccttaattcaattgcccaaacaaagctacagcaaaatcgatcc 16009669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 159 - 472
Target Start/End: Original strand, 14422726 - 14423037
Alignment:
Q  159 acaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    |||||||||| |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||     
T  14422726 acaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatc 14422824  T
Q  259 atattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattccc 358  Q
    ||| ||||||||||||| |||| ||||||||| |||||||||||  |||||||| ||||| ||||||||||| ||||||||||| ||| |||||||||||    
T  14422825 ataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatga-tcaatacccattccc 14422923  T
Q  359 ctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagat 456  Q
    || |||||||||||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | |||||  |||| ||||||||    
T  14422924 ctcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagat 14423021  T
Q  457 agtctctcccttacct 472  Q
    |||||| |||||||||    
T  14423022 agtctcacccttacct 14423037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 141 - 510
Target Start/End: Complemental strand, 10896123 - 10895753
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| || |||||    
T  10896123 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaaattcat 10896025  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  10896024 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 10895925  T
Q  340 tgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||  ||    | ||||||||||||||||||  |||||| | |    
T  10895924 tga-tcaatacccattcccctcagaatcatcatcaaaccctaacccacaa-tttatcttccaaaaactatgcaattaggtcaattttcaaaaattataga 10895827  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcc 510  Q
    ||||  |||| |||||||||||||| ||||||| | ||||||||||| ||| |  ||||||||||||||||||||    
T  10895826 ttat-gattattgagagatagtctcacccttacgttaattcaattgcccaaacaaagctacagcaaaatcgatcc 10895753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 141 - 477
Target Start/End: Original strand, 15167898 - 15168233
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| || |||||    
T  15167898 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaaattcat 15167996  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  15167997 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 15168096  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |    
T  15168097 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattataga 15168194  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||  ||||  ||||||||||||| ||||||||| ||||    
T  15168195 ttat-gattatcgagagatagtctcacccttaccttaatt 15168233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 60 - 392
Target Start/End: Original strand, 13743351 - 13743683
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||||||||| |||||||| || ||||| |||||| ||||| |    
T  13743351 caaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctatata 13743450  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| || || ||||| | ||||| ||||||  |||||||| ||||||| ||| |||| |||||||| ||||||   |||||||||| |||||| |||  |    
T  13743451 caactaagcatctaaggaaacaccaaaacagccattaacagcaacaatcacatatcactccaccattatacaattattcatcaatttatccaaccaagca 13743550  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttccc 358  Q
    || |||||| |||||| |||| ||| ||| |  ||||||||||  |||| |||||||| || | ||||| ||||||||||||| |||||||||| ||| |    
T  13743551 taatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatga-tcattacccatttctc 13743649  T
Q  359 ctaagaatcatcatcaaaccctaaccctcaattt 392  Q
     | | |||||||||||||||||||||||||||||    
T  13743650 ttcataatcatcatcaaaccctaaccctcaattt 13743683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 141 - 472
Target Start/End: Original strand, 18873083 - 18873413
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| || |||||    
T  18873083 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaaattcat 18873181  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  18873182 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 18873281  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |    
T  18873282 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattataga 18873379  T
Q  438 ttatctattaatgagagatagtctctcccttacct 472  Q
    ||||  ||||  |||||| |||||| |||||||||    
T  18873380 ttat-gattatcgagagaaagtctcacccttacct 18873413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 60 - 392
Target Start/End: Complemental strand, 13123329 - 13122995
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||||||||| |||||||| || ||||| |||||| ||||| |    
T  13123329 caaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctatata 13123230  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| || || ||||| | ||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||| | |    
T  13123229 caactaagcatctaaggaaacaccaaaacaaccattaacagcaacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactca 13123130  T
Q  260 tattttc--aatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattac-aacaaaattaacatgattcattaccca-tt 355  Q
    ||  |||  ||||| |||  ||| ||| |||||  | ||||||||  |  ||||||||||| | ||||| || | ||||||||||| |||||||||| ||    
T  13123129 taaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatagaattaacatga-tcattacccattt 13123032  T
Q  356 cccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    | | | | |||||||||||||||||||||||||||||    
T  13123031 ctcttcataatcatcatcaaaccctaaccctcaattt 13122995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 61 - 345
Target Start/End: Complemental strand, 21231371 - 21231089
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||| ||| |||||||| || |||||||||||| ||||||||    
T  21231371 aaaacctacgggttca-acctcttctcactccaaaaactcaattttaatcccctgatcaccctaaatgttttccagcagatgtttacaggtcctatacac 21231273  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||| | ||||||||||||| ||| ||  ||| ||||||||||||| |||||||||| | | |||||||||||||||  ||||| ||||||   |||     
T  21231272 aactagacatctaaaggaacac-aaatcaggcatcaacaacaacaatt-cagatcattctagcaatcatacaaaacttctccaatttatccaacagattc 21231175  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    || ||||| |||| || |||| ||||||||| ||||||||||||| |||||||||||| || ||||||||| | | ||||||||||    
T  21231174 taatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacaccaaattacaacacattaaacatgattc 21231089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 60 - 392
Target Start/End: Complemental strand, 12710258 - 12709924
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||  || |||||||| |||||||| || ||||| |||||| ||||| |    
T  12710258 caaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgttcacaggtcctatata 12710159  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| || || ||||| | ||||| ||||||| |||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||| | |    
T  12710158 caactaagcatctaaggaaacaccaaaacaaccattgacagcaacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactca 12710059  T
Q  260 tattttc--aatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattac-aacaaaattaacatgattcattaccca-tt 355  Q
    ||  |||  ||||| |||  ||| ||| |||||  | ||||||||  |  ||||||||||| | ||||| || | ||||||||||| |||||||||| ||    
T  12710058 taaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatagaattaacatga-tcattacccattt 12709961  T
Q  356 cccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    | | | | |||||||||||||||||||||||||||||    
T  12709960 ctcttcataatcatcatcaaaccctaaccctcaattt 12709924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 14320042 - 14319917
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14320042 aaaacttacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacac 14319943  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    |||||| | || ||||||||||||||    
T  14319942 aattagacatcgaaaggaacacaaaa 14319917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 13007075 - 13007269
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  13007075 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 13007174  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||| |||| | ||||||||||||| ||||    
T  13007175 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaat 13007269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 13664608 - 13664730
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||| ||||||  ||    
T  13664608 aaaacccaattttaatcccctgatcacccaaaacgttttccaaca-atgtttacaggttcaatacacaactaggcatctaaaggaacac-aaaacaggca 13664705  T
Q  194 ttaacaacaacaattacagatcattc 219  Q
    | ||||||||||||| ||||||||||    
T  13664706 tcaacaacaacaatt-cagatcattc 13664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 11383284 - 11383176
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||| || |||||||||||| |||||||    
T  11383284 caaaacctacgggttcagacctcttctcactccaagaacccaattttaatcccctgatcacctaaaacgttttccagcagatgtttacaggtcctataca 11383185  T
Q  160 caattaggc 168  Q
    ||| |||||    
T  11383184 caactaggc 11383176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 14230449 - 14230549
Alignment:
Q  86 tcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaa 185  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||| ||||| || |||||||||||||    
T  14230449 tcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacacaactaggcatcgaaaggaacacaaa 14230548  T
Q  186 a 186  Q
    |    
T  14230549 a 14230549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 60 - 244
Target Start/End: Complemental strand, 12591056 - 12590871
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||  || |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||| | ||||| |    
T  12591056 caaaacctacggtttcagactacttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacagatcctatata 12590957  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaat 244  Q
    ||| |||||  | ||||| ||||| ||  ||| ||| ||||||||||||||||| ||||||| |||||||| ||||  |||||||||    
T  12590956 caactaggcattataaagaaacac-aattcaaccatcaacaacaacaattacagaatcattctaccatcatccaaatattcatcaat 12590871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 46625636 - 46625761
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||||||||||||  ||||||  ||    
T  46625636 aaaacccaattttaattccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaaca-taaaacatgca 46625734  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  46625735 tcaacaacaacaatt-cagctcattcca 46625761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 13679162 - 13679293
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaa 184  Q
    |||||||||||| || || ||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||| || ||||| ||||||||||||| |    
T  13679162 ctcactccaaaa-cctaattttaatcccctgatcacccaaaacgttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacac-a 13679259  T
Q  185 aaacaaacattaacaacaacaattacagatcattc 219  Q
    |||||  ||| ||||||||||||| ||||||||||    
T  13679260 aaacaggcatcaacaacaacaatt-cagatcattc 13679293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 11389761 - 11389653
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||||||||||||||| |||||||||| || |||| ||||||||||||||| || ||||||||||||| || ||||||||||||  |||| |    
T  11389761 caaaacctacgggttcagacctcttctcactccaagaatccaattttaatcccctgatcgcctaaaacgttttccagcagatgtttacaggtcttatata 11389662  T
Q  160 caattaggc 168  Q
    ||| |||||    
T  11389661 caactaggc 11389653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 16090730 - 16090837
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| | | ||||||||| || ||||| ||||| || | ||     
T  16090730 ttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatatacaatcagacatca 16090828  T
Q  173 aaaggaaca 181  Q
    |||||||||    
T  16090829 aaaggaaca 16090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 2966622 - 2966680
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttt 131  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2966622 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttt 2966680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 31155038 - 31155163
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||  |||||||||||||||| ||||||||||||||| ||||||| |||||||| |   |||||||||||  |||||||    
T  31155038 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccctgatcgcccaaaatgttttccagcgattgtttacaggtcttatacac 31155137  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    |  ||||| || ||| ||||||||||    
T  31155138 atctaggcatcaaaaagaacacaaaa 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 20311431 - 20311317
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggc-ctctaaaggaacacaaaaacaaac 192  Q
    ||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||||| | ||||||||||||||  ||| |||||||||| ||||| ||    
T  20311431 aaaacccaatttaaatcccctaatcacccaagatgttttccaacagatgtttacaggtccaatacacaattaggcaatct-aaggaacacagaaacagac 20311333  T
Q  193 attaacaacaacaatta 209  Q
    | |||||||||||||||    
T  20311332 a-taacaacaacaatta 20311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 20906859 - 20906726
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||   | || |||||| || ||||||||||  || | ||     
T  20906859 ttcagacttctcctcactccaaaaacctatttttaatcccctgatcacccaaaacgttttcc-tgaaatttttacaagtcctatacacaaccagacatc- 20906762  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    ||||||||| ||||  |||||| |||||||||||||    
T  20906761 aaaggaacagaaaactaaacatcaacaacaacaatt 20906726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 23664150 - 23664080
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  23664150 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 23664080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 29797576 - 29797646
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  29797576 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 29797646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 29801395 - 29801465
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  29801395 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 29801465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 29181508 - 29181402
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||| | | ||||||||| || ||||| ||||| || | ||     
T  29181508 ttcagacttctcctcactccaaaaacc-agttttaatcccctgatcacccaaaacgttttcc-ataaatgtttacaagtcctatatacaatcagacatca 29181411  T
Q  173 aaaggaaca 181  Q
    |||||||||    
T  29181410 aaaggaaca 29181402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 3857764 - 3857702
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    ||||||| |||| ||||||||||||||||| ||||||||||   |||||||||||||||||||    
T  3857764 ttcagacttctcatcactccaaaaacccaattttaatccccaattcacccaaaacgttttcca 3857702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 2465020 - 2465081
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||| |||   ||||||||||||||||||    
T  2465020 ttcagacttctcctcactccaaaaacccaattttaattcccaattcacccaaaacgttttcc 2465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 11382926 - 11382866
Alignment:
Q  418 caattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    |||||||| ||||||| |||||||  |||| |||||||||||||| ||||||||| ||||||    
T  11382926 caattttcagaaattatatattatg-attattgagagatagtctcacccttaccttaattca 11382866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 11389403 - 11389343
Alignment:
Q  418 caattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    |||||||| ||||||| |||||||  |||| |||||||||||||| ||||||||| ||||||    
T  11389403 caattttcagaaattatatattatg-attattgagagatagtctcacccttaccttaattca 11389343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 20311249 - 20311196
Alignment:
Q  277 tgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    |||| ||| ||||| || |||||||| ||||||||||||||||| |||||||||    
T  20311249 tgatcacagcaacattacagattaaggattcattctgaacatcaaattacaaca 20311196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 1e-88; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 141 - 517
Target Start/End: Complemental strand, 8728065 - 8727689
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| || |||||    
T  8728065 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaaattcat 8727967  T
Q  241 caattcatccaatcaattata-ttttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | ||| |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||    
T  8727966 caattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaaca 8727867  T
Q  340 tgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| ||| ||||||| ||||| ||||||||| |||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | |    
T  8727866 tga-tcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattataga 8727769  T
Q  438 ttatctattaatgagagatagtctctcccttacctgaattcaattgcacaac-cagctacagcaaaatcgatcccttcttg 517  Q
    ||||  |||| |||| |||| |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  8727768 ttat-gattattgagggataatctcacccttacctgaattcaattgcacaacaaagctacagcaaaatcgatcccctcttg 8727689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 141 - 472
Target Start/End: Original strand, 44477347 - 44477675
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  44477347 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 44477445  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||||| |||||||||    
T  44477446 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 44477545  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  44477546 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 44477644  T
Q  441 tctattaatgagagatagtctctcccttacct 472  Q
    |  |||| |||||||||||||| |||||||||    
T  44477645 t-gattattgagagatagtctcacccttacct 44477675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 141 - 472
Target Start/End: Original strand, 44492505 - 44492833
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  44492505 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 44492603  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||||| |||||||||    
T  44492604 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 44492703  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  44492704 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 44492802  T
Q  441 tctattaatgagagatagtctctcccttacct 472  Q
    |  |||| |||||||||||||| |||||||||    
T  44492803 t-gattattgagagatagtctcacccttacct 44492833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 330
Target Start/End: Complemental strand, 14056975 - 14056707
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  14056975 aaaacctacgggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacac 14056876  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc-caccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||  ||| ||||||||||||| ||||||||||  || |||||||||||||||  ||||| |||||| | |||     
T  14056875 aactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattctaacaatcatacaaaacttctccaatttatccaaccgattc 14056778  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    || || || |||| || |||| ||||||||| ||||||||||||| ||||||||||||||  |||||||||    
T  14056777 taattccattcaaattctgatcacaacaacattatagattaagaaatcattctgaacatcgaattacaaca 14056707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 61 - 330
Target Start/End: Original strand, 25111620 - 25111888
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||| |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  25111620 aaaacctacaggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacac 25111719  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcc-accatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || || || ||||||||||||| ||||||  ||| ||||||||||||| ||||||||||| || |||||||||||||||  ||||| |||||| | |||     
T  25111720 aactatgcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattccaacaatcatacaaaacttctccaatttatccaaccgattc 25111817  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    || ||||| |||| || |||| ||| || || ||||||||| ||||||||||||||||||| | |||||||    
T  25111818 taatttcattcaaattctgatcacatcagcattatagattaggaattcattctgaacatcaaaatacaaca 25111888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 200 - 382
Target Start/End: Complemental strand, 27941127 - 27940946
Alignment:
Q  200 acaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagatt 299  Q
    ||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||| | ||||||||||||||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcataacaacagtatagatt 27941028  T
Q  300 aagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaa 382  Q
    ||   |||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  27941027 aaattttcattctgaacattacattacaacagaattaacatga-tcaatacccattcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 60 - 392
Target Start/End: Original strand, 23866255 - 23866589
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||||||||| |||||||| || ||||| |||||| ||||| |    
T  23866255 caaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctatata 23866354  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| || || ||||| | ||||| ||||||| |||||||| ||||||| |||||| |||||||||||||||| || |||||||||||||||||||| | |    
T  23866355 caactaagcatctaaggaaacaccaaaacaaccattaacagcaacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactca 23866454  T
Q  260 tattttc--aatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattac-aacaaaattaacatgattcattaccca-tt 355  Q
    ||  |||  ||||| |||  ||| | | |||||  | ||||||||  |  ||||||||||| | ||||| || | ||||||||||| |||||||||| ||    
T  23866455 taaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatattacaaatagaattaacatga-tcattacccattt 23866552  T
Q  356 cccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    | | | | |||||||||||||||||||||||||||||    
T  23866553 ctcttcataatcatcatcaaaccctaaccctcaattt 23866589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 73 - 338
Target Start/End: Complemental strand, 29643787 - 29643522
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaacttt-aatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctc 171  Q
    ||||||| ||||||||||||||||| || ||||| |||||| |||||||||||||||||||||| || |||||||||||||| |||||||| ||||| ||    
T  29643787 ttcagacttctcctcactccaaaaaacccacttttaatcccgtgatcacccaaaacgttttccagcaaatgtttacaggttcaatacacaactaggcatc 29643688  T
Q  172 taaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaattatattttcaatc 270  Q
     |||||||||  ||||||  ||| | ||||||||||| |||| ||||| | | |||||||||||||||| ||||||||||||   ||| |||||||| ||    
T  29643687 aaaaggaaca-taaaacaggcatcatcaacaacaatt-cagagcattctagcaatcatacaaaacttca-caattcatccaacatattctattttcattc 29643591  T
Q  271 aatttgtgatgacaa-caacagtatagattaagaattcattctgaacatcacattacaacaaaattaac 338  Q
     | || |||| |||| ||||| ||||||||||||| |||| ||||||| || ||||||||| |||||||    
T  29643590 caattctgatcacaatcaacattatagattaagaaatcatactgaacaccaaattacaacacaattaac 29643522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 17054234 - 17054428
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |    
T  17054234 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatata 17054333  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  |  |||| ||||| ||  ||  ||| |||||||||||||| || ||||||||||||||  |||| | ||||||||||||| ||||    
T  17054334 caactaggcattacaaagaaacac-aattcagccatcaacaacaacaattatagaatcattccaccatctcacaatatttcatcaattcatacaat 17054428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 18613916 - 18614072
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    ||||| |||||||| || |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||    
T  18613916 aaaacctacgggtttcaaacctcttctcactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggtttaataca 18614014  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc 219  Q
    ||| ||| |  ||||||||| || ||||||  ||| ||||||||||||| ||||||||||    
T  18614015 caactagacacctaaaggaatac-aaaacaggcatcaacaacaacaatt-cagatcattc 18614072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 21931374 - 21931499
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||| ||| |||   |||| ||||||||||||| ||||||  ||    
T  21931374 aaaacccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacac-aaaacatgca 21931472  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  21931473 tcaacaacaacaatt-cagctcattcca 21931499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 24321070 - 24321009
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24321070 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 24321009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 21840078 - 21840203
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||| ||||||| |||||| | |||||||||||||| ||| |||   |||| ||||||||||||| ||||||  ||    
T  21840078 aaaacccaattttaatcccctgatcacctaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacac-aaaacatgca 21840176  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  21840177 tcaacaacaacaatt-cagctcattcca 21840203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 19750240 - 19750319
Alignment:
Q  107 aatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaa 186  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||| || | ||| |||| |||||||||||||||||    
T  19750240 aatcccctgatcacccaaaacgttttccagaaaatgtttacaggttctgtatataataaggcatctaaaggaacacaaaa 19750319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 364890 - 364960
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||| ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  364890 tgagagttagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 364960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 23482117 - 23482050
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||    
T  23482117 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaatt 23482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 5e-85; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 141 - 477
Target Start/End: Complemental strand, 20437355 - 20437021
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  20437355 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 20437257  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  20437256 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataattaacat 20437157  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  20437156 ga-tcaatacccattcccctcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 20437059  T
Q  439 tatctattaatgagagatagtctctcccttacctgaatt 477  Q
    |||  |||| |||||||||||||| ||||||||| ||||    
T  20437058 tat-gattattgagagatagtctcacccttaccttaatt 20437021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 61 - 317
Target Start/End: Original strand, 18712443 - 18712697
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18712443 aaaacctacgggttcaaacctctcctcactccaaaa-cccaattttagtcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacac 18712541  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| |||||| |||| ||||||||||||| | |||||||| | | |||||||||||| ||  |||||   |||| |||||     
T  18712542 aactaggcatctaaaggaacac-aaaacagacatcaacaacaacaatt-ctgatcattctagcaatcatacaaaacctctccaattttcccaaccaattc 18712639  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
    || | ||  |||| || |||| ||| ||||| ||||||||||||| ||||||||||||    
T  18712640 taatctccctcaaattctgatcacagcaacattatagattaagaaatcattctgaaca 18712697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 19961825 - 19961908
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctata 157  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  19961825 ttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaacgttttccagcaaatgtttacaggtcctata 19961908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 20851532 - 20851471
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20851532 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 20851471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 20858159 - 20858098
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20858159 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 20858098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 21705931 - 21705992
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21705931 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 21705992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 20045350 - 20045240
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||   | ||||||||||||  ||||||||| || || |||    
T  20045350 ttcagacttctcatcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccggga-atgtttacaggtcatatacacaactaagcatct 20045252  T
Q  173 aaaggaacacaa 184  Q
    || | |||||||    
T  20045251 aaggaaacacaa 20045240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 21710474 - 21710535
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21710474 ttcagacttctcctcactccaaaaacccaattttaattccctgatcacccaaaacgttttcc 21710535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 11157735 - 11157891
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||||||||||| || |||  | |||||||||||| | ||| ||||||||||||||||| |  || || | |||||| ||||||||||||||   |||    
T  11157735 aaaacttacgggtttcaaaccctttctcactccaaaa-ctcaattttaatcccctgatcactcggaatgtgtcccaacagatgtttacaggttcagaaca 11157833  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc 219  Q
    ||| ||||| ||||||||||||| ||||||   |||||||||||||||| ||||||||||    
T  11157834 caactaggcatctaaaggaacac-aaaacaggtattaacaacaacaatt-cagatcattc 11157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 317
Target Start/End: Original strand, 32651295 - 32651471
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttca 239  Q
    |||||| ||||||  || |||||||||| ||||||||||||  ||||||  ||| ||||||||||||| |||||||||| | | |||||||||||||||     
T  32651295 tgtttataggttcattatacaattaggcatctaaaggaaca-taaaacaggcatcaacaacaacaatt-cagatcattctagcaatcatacaaaacttct 32651392  T
Q  240 tcaattcatccaatcaattatattttcaatc-aatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
     ||||| ||||||  |||| || | ||| || || || |||| ||| ||||| ||||||||||||| ||||||| ||||    
T  32651393 ccaatttatccaacaaattctaatctcattcaaaattctgatcacagcaacattatagattaagaaatcattctaaaca 32651471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 330
Target Start/End: Complemental strand, 19663794 - 19663662
Alignment:
Q  198 caacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatag 296  Q
    ||||||||||| |||||||||| | || ||| ||||||||||  ||||| ||||||   ||| || ||||| || | || |||| ||| ||||| |||||    
T  19663794 caacaacaatt-cagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatcacagcaacattatag 19663696  T
Q  297 attaagaattcattctgaacatcacattacaaca 330  Q
    |||||||| ||||||||||||||| |||||||||    
T  19663695 attaagaaatcattctgaacatcaaattacaaca 19663662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 22030126 - 22030085
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  22030126 aaaacccaattttaatcccctgatcacccaaaacgtattcca 22030085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 482
Target Start/End: Complemental strand, 10811814 - 10811775
Alignment:
Q  443 tattaatgagagatagtctctcccttacctgaattcaatt 482  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  10811814 tattattgagagatagtctcacccttacctgaattcaatt 10811775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 32651563 - 32651630
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||    
T  32651563 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaatt 32651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 61 - 314
Target Start/End: Original strand, 3305 - 3558
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3305 aaaacttatgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttctatacac 3404  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat 260  Q
    || ||||| ||||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||   ||    
T  3405 aactaggcatctaaaggaacac-aaaacagccatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccat 3503  T
Q  261 -attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctga 314  Q
     | ||||||||||||| |||| ||| |||||  | ||||||||  ||||||||||    
T  3504 aaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 155; Significance: 5e-82; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 60 - 472
Target Start/End: Complemental strand, 12264 - 11853
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| || || ||||||||||| |||||||||||||||||| || |||||||||||||||||||  | ||||||||| |||||||||||| ||||| |    
T  12264 caaaacctatggtttcagacctcttctcactccaaaaacccaatttaaatcccctgatcacccaaagtggtttccaacagatgtttacaggtcctatata 12165  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| ||||| ||||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |    
T  12164 caactaggcatctaaaggaacac-aaaacagccatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactca 12066  T
Q  260 t-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcc 357  Q
    | | |||||||||| || |||| ||| |||||  | ||||||||  ||||||||||| || | ||||||| | ||||||||||| |||||||||| ||||    
T  12065 taaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaagagaattaacatga-tcattacccatttcc 11967  T
Q  358 cctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagagata 457  Q
    | | |||||||||||||||||||||| ||||||||  |   |||    | |||||||||||||||||| ||||||| | |||||  |||| |||||||||    
T  11966 cttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagata 11868  T
Q  458 gtctctcccttacct 472  Q
    ||||| |||||||||    
T  11867 gtctcacccttacct 11853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 141 - 472
Target Start/End: Original strand, 111410 - 111738
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  111410 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 111508  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  111509 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 111608  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  111609 ga-tcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 111707  T
Q  441 tctattaatgagagatagtctctcccttacct 472  Q
    |  |||| |||||||||||||| |||||||||    
T  111708 t-gattattgagagatagtctcacccttacct 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 141 - 479
Target Start/End: Complemental strand, 28370385 - 28370050
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| |||||| ||| |||||||||| |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  28370385 tgtttataggttcaatatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 28370287  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    |||||||||| |||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||||| |||||||||    
T  28370286 caattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 28370187  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||||||  |   |||    | |||||||||||||||||| ||||||| | ||||    
T  28370186 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 28370088  T
Q  441 tctattaatgagagatagtctctcccttacctgaattca 479  Q
    |  |||| |||||||||||||| ||||||||| ||||||    
T  28370087 t-gattattgagagatagtctcacccttaccttaattca 28370050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 141 - 472
Target Start/End: Complemental strand, 38144867 - 38144539
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| || |||||||| ||||||||| |||||||||||||||| ||||||    
T  38144867 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaagaacaacaaatacagatcactccaccatcatacaaatcttcat 38144769  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    |||||||||||||||||  || ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||| | |||||||||    
T  38144768 caattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacat 38144669  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctcaaggtgaagcaattaggtcaattttccgaaattacatatta 440  Q
    || ||| ||||||||||||| |||||||||||||||||||||||||||||||  |   |||  | | |||||||||||||||||| ||||||| | ||||    
T  38144668 ga-tcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagatta 38144570  T
Q  441 tctattaatgagagatagtctctcccttacct 472  Q
    |  |||| |||||||||||||| |||||||||    
T  38144569 t-gattattgagagatagtctcacccttacct 38144539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 141 - 479
Target Start/End: Original strand, 19512110 - 19512446
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||| | |||||||||||| |||| ||  ||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  19512110 tgtttataggttcattatacaattagacatctaaaggaacataaaa-catgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcat 19512208  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| || |||||| | |||||||||    
T  19512209 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaattaacat 19512308  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| | |||||||||||||||||||||||||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  19512309 ga-tcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 19512406  T
Q  439 tatctattaatgagagatagtctctcccttacctgaattca 479  Q
    |||  |||| |||||||||||||| ||||||||| ||||||    
T  19512407 tat-gattattgagagatagtctcacccttaccttaattca 19512446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 141 - 472
Target Start/End: Original strand, 22750864 - 22751194
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || |||||||||| |||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||| || |||||    
T  22750864 tgtttataggttcattatacaattaggcatctaaaggaacataaaa-catgcatcaacaacaacaattacagatcattccaccatcatacacaaattcat 22750962  T
Q  241 caattcatccaatcaattat-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaaca 339  Q
    ||||||||||||||| | || ||||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||    
T  22750963 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 22751062  T
Q  340 tgattcattaccca-ttcccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacata 437  Q
    ||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| | |||    | |||||||||||||||||| ||||||| | |    
T  22751063 tga-tcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattataga 22751160  T
Q  438 ttatctattaatgagagatagtctctcccttacct 472  Q
    ||||  ||||  |||||| |||||| |||||||||    
T  22751161 ttat-gattatcgagagaaagtctcacccttacct 22751194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 61 - 256
Target Start/End: Original strand, 34829728 - 34829922
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||  |||||||||||  |||||||    
T  34829728 aaaacttacgatttcagacttcttctcactccaaaaacccaattttaatcccatgatcacccaaaatgttttccagcaattgtttacaggtcttatacac 34829827  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatcaa 256  Q
    || |||||  | |||||| ||| |||| |  ||||||||||| ||||| ||  |||||||| || |||||||||||||||||||||||| |||||||    
T  34829828 aactaggcaccgaaaggagcac-aaaatatgcattaacaacatcaatt-caactcattccaacattcatacaaaacttcatcaattcattcaatcaa 34829922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 60 - 253
Target Start/End: Original strand, 23528273 - 23528467
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| |||| |||||| |||||||||||| ||||| |    
T  23528273 caaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgtttcccaacagatgtttacaggtcctatata 23528372  T
Q  160 caattaggc-ctctaaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||| |||||  | || || ||||| ||  ||| ||| |||||||||||||| || ||||||| ||||||| |||| | ||||||||||||| ||||    
T  23528373 caactaggcattatacagaaacac-aattcaaccatcaacaacaacaattatagaatcattctaccatcacacaatatttcatcaattcatacaat 23528467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 61 - 318
Target Start/End: Complemental strand, 18408353 - 18408100
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    ||||| |||||||| || |||| | |||||||||||| ||||| |||||||||||||||||||  |||| ||||||||| ||| ||||||||||  |  |    
T  18408353 aaaacctacgggtttcaaaccttttctcactccaaaa-cccaattttaatcccctgatcaccc--aacg-tttccaacagatggttacaggttcattgta 18408258  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    ||| ||||| ||||||||||||| ||||||  ||||||||||||||||| |||||||||| | | |||||||||||| ||  |||||   |||| |||||    
T  18408257 caactaggcatctaaaggaacac-aaaacaggcattaacaacaacaatt-cagatcattctagcaatcatacaaaacctctccaattttcccaaccaatt 18408160  T
Q  259 atattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacat 318  Q
     || | ||  |||| || |||| ||| ||||| ||||||||||||| |||||||||||||    
T  18408159 ctaatctccctcaaattctgatcacagcaacattatagattaagaaatcattctgaacat 18408100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 19236556 - 19236617
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19236556 ttcagacctctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 19236617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 20772626 - 20772687
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  20772626 ttcagacttctcctcactccaaaaacccaattttaatcccctgattacccaaaacgttttcc 20772687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 22460812 - 22460873
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22460812 ttcagacttctcctcactccaaagacccaagtttaatcccctgatcacccaaaacgttttcc 22460873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 22467436 - 22467497
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22467436 ttcagacttctcctcactccaaagacccaattttaatcccctgatcacccaaaacgttttcc 22467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 24930327 - 24930266
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24930327 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttcc 24930266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 9777130 - 9777200
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  9777130 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 9777200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 20781401 - 20781462
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  20781401 ttcagacttctcctcactccaaaaacccaattttaatcccctgattacccaaaacattttcc 20781462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 208
Target Start/End: Complemental strand, 22439126 - 22439013
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggc-ctctaaaggaacacaaaaacaaac 192  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| |||||||||| | | ||||||||||||||  ||| |||||||||| ||||| ||    
T  22439126 aaaacccaatttaaatcccctgatcacccaagatgttttccaacagatgtttacagttccaatacacaattaggcaatct-aaggaacacagaaacagac 22439028  T
Q  193 attaacaacaacaatt 208  Q
    | |||||||| |||||    
T  22439027 a-taacaacagcaatt 22439013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 18408008 - 18407939
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    ||||||| ||||||||| ||||||| |||||||  |||| |||||||||||||| ||||||||| ||||||    
T  18408008 caattagatcaattttcagaaattatatattatg-attattgagagatagtctcacccttaccttaattca 18407939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28889727 - 28889673
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28889727 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28889673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28896431 - 28896377
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28896431 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28896377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28909679 - 28909625
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28909679 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28909625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28925257 - 28925203
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28925257 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28931371 - 28931317
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28931371 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28931317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28946074 - 28946020
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcca 135  Q
    |||||||||||||||||||||| ||||||||||   || ||||||||||||||||    
T  28946074 tctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttcca 28946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 24594077 - 24594022
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  24594077 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 24594022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 24668171 - 24668116
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  24668171 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 24668116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 24736766 - 24736711
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  24736766 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 24736711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 24737940 - 24737885
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  24737940 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 24737885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 24750709 - 24750654
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||    
T  24750709 cccttacctgaattcaattgcacaaacaaagctacagcaaaatcgttcccctcttg 24750654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 20819876 - 20819934
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttt 131  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||   |||||||||||||||    
T  20819876 ttcagacttctcttcacttcaaaaacccaattttaatccccaattcacccaaaacgttt 20819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 23111264 - 23111197
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaatt 477  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||    
T  23111264 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaatt 23111197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 150; Significance: 5e-79; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 61 - 472
Target Start/End: Original strand, 30498 - 30910
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||  |    
T  30498 aaaacctacgggtccagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgtttcccaacagatgtttacaggttctatatgc 30597  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatca-tacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| |||||||||| ||| |||||  ||| ||||||||||||| ||||||||||||| | || ||||||||  || |||||||||||| |||||     
T  30598 aactaggcatctaaaggaa-acacaaacaggcatcaacaacaacaatt-cagatcattccacaaccattacaaaaccccaccaattcatccaaccaattc 30695  T
Q  260 tattttcaa--tcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattac-ccattc 356  Q
    || || |||  |||| ||||||| ||| ||||| ||||||||| |||||||||||| ||||||| |||||||| | ||||||||| || |||| ||||||    
T  30696 taattacaatttcaaattgtgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatga-tcgttacaccattc 30794  T
Q  357 ccctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagaga 455  Q
    |||| | ||||||||||||||||||| ||||||||||| | | |||    | |||||||||||||||||| ||||||| | |||||  |||| |||||||    
T  30795 ccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagaga 30893  T
Q  456 tagtctctcccttacct 472  Q
    ||||||| |||||||||    
T  30894 tagtctcacccttacct 30910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 73 - 391
Target Start/End: Original strand, 11847761 - 11848080
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||| || |||||||||||||||||||| |||||| |||| |||||||||||| ||||| |||||||| | |||    
T  11847761 ttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatct 11847860  T
Q  173 aaaggaacacaaaaacaaacattaa-caacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat-attttcaatc 270  Q
    |||||||||| ||||||  ||| || |||||||||||||||||||||||| ||||||||| || |||||||||||||||||||| | || ||||||||||    
T  11847861 aaaggaacac-aaaacagtcatcaaccaacaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatc 11847959  T
Q  271 aatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcc-cctaagaatcat 369  Q
    ||||| |||| ||| |||||  | ||||||||  |||||||||||||| | |||| || |  |||||||||| |||||||||||||| | | |||||| |    
T  11847960 aatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaaaggattaacatga-tcattacccattcctcttcagaatcgt 11848058  T
Q  370 catcaaaccctaaccctcaatt 391  Q
    ||||||||||||||||||||||    
T  11848059 catcaaaccctaaccctcaatt 11848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 61 - 392
Target Start/End: Complemental strand, 8046244 - 8045913
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||| || |||||||||||| ||||| ||    
T  8046244 aaaacctacggtttcagacctctcctcactccaaaaatccaattttaatcccccgatcacccaaaatgttttccagcagatgtttacaggtcctatatac 8046145  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat 260  Q
    || || || ||||| | ||||| | ||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||    
T  8046144 aactaagcatctaaggaaacac-agaacaaccattaacagcaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcat 8046046  T
Q  261 -attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttccc 358  Q
     | ||||||||||||| |||| ||| |||||  |  |||||||  |||||||||||||| | ||||||| | ||||||||| | || ||||||| |||||    
T  8046045 aaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaagagaattaacatta-tctttacccatttccc 8045947  T
Q  359 ctaagaatcatcatcaaaccctaaccctcaattt 392  Q
     | |||||  || |||||||||||||||||||||    
T  8045946 ttcagaattctcgtcaaaccctaaccctcaattt 8045913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 61 - 343
Target Start/End: Original strand, 15407781 - 15408062
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  15407781 aaaacctacgggttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacac 15407880  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc-caccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| || |||||||||| ||||||  ||| || |||||||||| ||||||||||  || |||||||||||||||  ||||| |||||| | |||     
T  15407881 aactaggcatcgaaaggaacac-aaaacaggcatcaaaaacaacaatt-cagatcattctaacaatcatacaaaacttctccaatttatccaaccgattc 15407978  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgat 343  Q
    || ||||| |||| || |||| ||| ||||| ||||||||||||| ||||||||||||||| ||||||||| | | ||||||||    
T  15407979 taatttcattcaaattctgatcacagcaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacatgat 15408062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 14486303 - 14486449
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||| | ||||||||| |||||||||||||  || |||    
T  14486303 aaaacctacgggttcagacctcttctcactccaaaaactcaattttaatcccctgatcaaccaaaatgatttccaacagatgtttacaggtttaatgcac 14486402  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    || ||| | ||||||||||||| |||||| |||| |||||||||||||    
T  14486403 aactagacatctaaaggaacac-aaaacagacatcaacaacaacaatt 14486449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 27905921 - 27906103
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||| ||||| ||     
T  27905921 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcat-tgtttacaggtcctatacacaactaggcatcg 27906019  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatcaat 257  Q
    |||||||||||||   |  ||||||||||| ||||| ||  |||||||| || |||||||||||||  ||||||||| ||| ||||    
T  27906020 aaaggaacacaaagt-atgcattaacaacatcaatt-caactcattccaacaatcatacaaaactttctcaattcattcaaccaat 27906103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 8834571 - 8834684
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| |||||||||||||||||||||||||| |||||  | ||||||||||||||  |||||||| |||| ||||||||||||| ||||||  ||    
T  8834571 aaaacccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcattacacaataaggcatctaaaggaacac-aaaacatgca 8834669  T
Q  194 ttaacaacaacaatt 208  Q
    | |||||||||||||    
T  8834670 tcaacaacaacaatt 8834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 16147230 - 16147123
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| | | ||||||||| || ||||| ||||| || | ||     
T  16147230 ttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatatacaatcagacatca 16147132  T
Q  173 aaaggaaca 181  Q
    |||||||||    
T  16147131 aaaggaaca 16147123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 15535146 - 15535216
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  15535146 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 15535216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 36038835 - 36038905
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  36038835 tgagagatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 36038905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 14486695 - 14486760
Alignment:
Q  454 gatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  14486695 gatagtctcacccttacctgaattcaattgcacaaacaaagctacagcaaaatcgatcccttcttg 14486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 53483346 - 53483454
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||||||| || |||||||||||||| | | |||||||||||||| ||||||||  | |||||||| |||||||||||| | ||| |    
T  53483346 caaaacctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggtccaatata 53483445  T
Q  160 caattaggc 168  Q
    ||| |||||    
T  53483446 caactaggc 53483454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 517
Target Start/End: Complemental strand, 22724742 - 22724641
Alignment:
Q  417 tcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttc 514  Q
    ||||||||| ||||||  ||| ||| ||||| |||||||||||||| |||||| |||||||||||||||||| |  | ||||||||||||||||||| ||    
T  22724742 tcaattttcagaaattctatactat-tattattgagagatagtctcacccttatctgaattcaattgcacaaacaaatctacagcaaaatcgatcccctc 22724644  T
Q  515 ttg 517  Q
    |||    
T  22724643 ttg 22724641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 49546972 - 49546902
Alignment:
Q  449 tgagagatagtctctcccttacctgaattcaattgcacaacc--agctacagcaaaatcgatcccttcttg 517  Q
    |||||||||||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||| |||||    
T  49546972 tgagagatagtctcacccttacctgagttcaattgcacaaacaaagctacagcaaaatcgatcccctcttg 49546902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 13888318 - 13888410
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaa 186  Q
    ||||||||| |||||||||||||||||||||||| | |||||| | | ||||||||||||  || | ||| |||| |||||||||||| ||||    
T  13888318 aaaacccaattttaatcccctgatcacccaaaacatattccaaaagacgtttacaggttcagtatataataaggcatctaaaggaacataaaa 13888410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 15307799 - 15307883
Alignment:
Q  97 acccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaaca 181  Q
    |||||| |||||||||||||||||||||||||| |||||  | ||||||||||||||  || | ||| |||| ||||||||||||    
T  15307799 acccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcagtatataataaggcatctaaaggaaca 15307883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 15244891 - 15244950
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttc 153  Q
    ||||||||| |||||||||||||||||||||||||| |||||  | ||||||||||||||    
T  15244891 aaaacccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttc 15244950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 25217495 - 25217456
Alignment:
Q  30 ctcctgtcttcatcattgccttaaattcctcaaaacttac 69  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25217495 ctcctgtcttcatcattgccttaaattcctcaaaacttac 25217456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1969637 - 1969673
Alignment:
Q  33 ctgtcttcatcattgccttaaattcctcaaaacttac 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  1969637 ctgtcttcatcattgccttaaattcctcaaaacttac 1969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 13887461 - 13887553
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaa 186  Q
    ||||||||| |||||||||||||||||||||||||| |||||  | | |||||||||||   || | ||| |||| |||||||||||| ||||    
T  13887461 aaaacccaattttaatcccctgatcacccaaaacgtattccagaagacgtttacaggtttagtatataataaggcatctaaaggaacataaaa 13887553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 41403953 - 41403897
Alignment:
Q  464 cccttacctgaattcaattgcacaacc--agctacagc-aaaatcgatcccttcttg 517  Q
    ||||||||||||||||||||||||| |  ||||||||| |||||||||||| |||||    
T  41403953 cccttacctgaattcaattgcacaaacaaagctacagcaaaaatcgatcccctcttg 41403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 141 - 472
Target Start/End: Complemental strand, 10527 - 10198
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || ||||| || | |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  10527 tgtttataggttcattatacaataagacatctaaaggaacataaaa-cacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcat 10429  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  10428 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 10329  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  10328 ga-tcaatacccattcccctcagaatcatcatcaaaccctaacccacaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 10231  T
Q  439 tatctattaatgagagatagtctctcccttacct 472  Q
    |||  |||| |||||||||||| | |||||||||    
T  10230 tat-gattattgagagatagtcccacccttacct 10198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 141 - 472
Target Start/End: Complemental strand, 1857 - 1528
Alignment:
Q  141 tgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcat 240  Q
    |||||| ||||||  || ||||| || | |||||||||||| |||| ||  ||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  1857 tgtttataggttcattatacaataagacatctaaaggaacataaaa-cacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcat 1759  T
Q  241 caattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacat 340  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||    
T  1758 caattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 1659  T
Q  341 gattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattttatcctc--aaggtgaagcaattaggtcaattttccgaaattacatat 438  Q
    || ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||  ||    | |||||||||||||||||| ||||||| | ||    
T  1658 ga-tcaatacccattcccctcagaatcatcatcaaaccctaacccacaa-tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagat 1561  T
Q  439 tatctattaatgagagatagtctctcccttacct 472  Q
    |||  |||| |||||||||||| | |||||||||    
T  1560 tat-gattattgagagatagtcccacccttacct 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 73 - 392
Target Start/End: Original strand, 835 - 1152
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    |||| |||||| |||||||||||||||||| ||||||||||  || |||||||| |||||||| || |||||||||||| ||||| |||| || || |||    
T  835 ttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgtttacaggtcctatatacaactaagcatct 934  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat-attttcaatca 271  Q
    || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | || | |||||||||    
T  935 aagggaacacaaa--cagccattaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatca 1032  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctaagaatcatc 370  Q
    |||| |||| ||| |||||  | ||||||||  |||||||||||||| | ||||||| | ||||||||||| |||||||||| ||||| | | |||| ||    
T  1033 atttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaagagaattaacatga-tcattacccatttcccttcataatcctc 1130  T
Q  371 atcaaaccctaaccctcaattt 392  Q
    ||||||||||||||||||||||    
T  1131 atcaaaccctaaccctcaattt 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 73 - 392
Target Start/End: Original strand, 49836 - 50153
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    |||| |||||| |||||||||||||||||| ||||||||||  || ||||| || |||||||| || |||||||||||| ||||| |||| || || |||    
T  49836 ttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccacaatgttttccagcagatgtttacaggtcctatatacaactaagcatct 49935  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattat-attttcaatca 271  Q
    || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | || | |||||||||    
T  49936 aagggaacacaaa--cagccattaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatca 50033  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctaagaatcatc 370  Q
    |||| |||| ||| |||||  | ||||||||  |||||||||||||| | ||||||| | ||||||||||| |||||||||| ||||| | | |||| ||    
T  50034 atttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaagagaattaacatga-tcattacccatttcccttcataatcctc 50131  T
Q  371 atcaaaccctaaccctcaattt 392  Q
    ||||||||||||||||||||||    
T  50132 atcaaaccctaaccctcaattt 50153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 118; Significance: 6e-60; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 60 - 472
Target Start/End: Original strand, 111544 - 111935
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||| |||||||| ||||| |    
T  111544 caaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgtttcccaacagatg-ttacaggtcctatata 111642  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    ||| ||||| ||||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||| || ||||||||                    
T  111643 caactaggcatctaaaggaacac-aaaacagccatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaa---------------- 111725  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttccc 358  Q
       ||||||||||||| |||| ||| || ||  | ||||||||  |||||||||||||| | ||||||| | ||||||||||| |||||||||| |||||    
T  111726 ---tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatga-tcattacccatttccc 111821  T
Q  359 ctaagaatcatcatcaaaccctaaccctcaattttatcct-caaggtgaagcaattaggtcaa-ttttccgaaattacatattatctattaatgagagat 456  Q
     | |||||||||||||||||||||||||||| |||||| | |||    | ||||||||||||| ||||| ||||||| | |||||  |||| ||||||||    
T  111822 ttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattat-gattattgagagat 111919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 91601 - 91540
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| ||||||||||   ||||||||||||||||||    
T  91601 ttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc 91540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 97327 - 97266
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| | |||||||||||||||||||| ||||||||||   ||||||||||||||||||    
T  97327 ttcagacttttcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc 97266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 61 - 345
Target Start/End: Complemental strand, 102340 - 102057
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  102340 aaaacctacgggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccataacgttttccaacagatgtttacaggttcaatacac 102241  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||  ||| ||||||||||||| ||||||||   | | |||||||||||||||  ||||| || |||  ||||     
T  102240 aactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcatcatagcaatcatacaaaacttctccaatttattcaacaaattc 102143  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    || ||||| |||| || |||| | ||||||| ||||||||||||| |||||||||| |||| ||| ||||| | | ||||||||||    
T  102142 taatttcattcaaattctgatcataacaacattatagattaagaaatcattctgaatatcaaatttcaacacattaaacatgattc 102057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 60 - 472
Target Start/End: Complemental strand, 1165 - 753
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaac-ccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatac 158  Q
    |||||| ||||| ||||||||||| |||||||||||||  |||| ||||||||||  ||||||||||| |||||||| || |||||||||||| |||||     
T  1165 caaaacctacggtttcagacctcttctcactccaaaaaaaccaattttaatcccccaatcacccaaaatgttttccagcagatgtttacaggtcctatat 1066  T
Q  159 acaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    |||| || || ||||| | |||| |||| ||| |||||||||||||||| ||| ||| ||||||||||||||| || |||||||||||||||||||| |     
T  1065 acaactaagcatctaaggaaacataaaa-caaccattaacaacaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaatcactc 967  T
Q  259 at-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttc 356  Q
    || | ||||||||| ||| |||| ||| |||||  | ||||||||  || || |||||||| | ||||||| |  |||| ||||| |||||||||| |||    
T  966 ataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattacaagagtattatcatga-tcattacccatttc 869  T
Q  357 ccctaagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggtgaagcaattaggtcaattttccgaaattacatattatctattaatgagag 454  Q
    || | | |||| |||||||||||||||||||||||  || |||  ||  | | |||||||||||||||||| ||||||| | |||||  |||| ||||||    
T  868 ccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaact-atgcaattaggtcaattttcagaaattatagattat-gattattgagag 771  T
Q  455 atagtctctcccttacct 472  Q
    |||||||| |||||||||    
T  770 atagtctcacccttacct 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 61 - 330
Target Start/End: Complemental strand, 34688 - 34421
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||  ||||| |||||||||||| | ||| |||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||    
T  34688 aaaacctacgggttcaaccctcttctcactccaaaa-ctcaattttaatcccctgattacccaaaacgttttccaacagatatttacaggttcaatacac 34590  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc-caccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||  || |||| ||||||||||  ||||| ||||||   |||     
T  34589 aactaggcatctaaaggaacac-aaaacaagcattaacaacaacaatt-cagatcattctaacaatcacacaaaacttctccaatttatccaacagattc 34492  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    || ||||| || | || |||| ||| ||||| ||||||||||||| ||||||||||||||| |||||||||    
T  34491 taatttcattccaattctgatcacagcaacattatagattaagaaatcattctgaacatcaaattacaaca 34421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 61 - 317
Target Start/End: Complemental strand, 419 - 165
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||||||||  ||||| |||||||||||| ||||| |||||||||| ||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  419 aaaacctacgggttcaaccctcttctcactccaaaa-cccaattttaatcccccgattacccaaaacattttccaacagatgtttacaggttcaatacac 321  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||  ||||||||||||||||| |||||||||| | | |||||||||||||||  ||||| ||||||  ||||     
T  320 aactaggcatctaaaggaacac-aaaacatgcattaacaacaacaatt-cagatcattctagcaatcatacaaaacttctccaatttatccaacaaattc 223  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
    || ||||  |||| || |||  ||||||||  ||||||||||||| ||||||||||||    
T  222 taatttccttcaaattctgaccacaacaacgttatagattaagaaatcattctgaaca 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 129 - 392
Target Start/End: Original strand, 3 - 265
Alignment:
Q  129 ttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaa-caacaattacagatcattccaccatca 227  Q
    ||||||| || |||||||||||| ||||| |||| || || ||||| | ||||||||| ||| ||| ||||| |||||| ||||||||| |||||||| |    
T  3 ttttccagcagatgtttacaggtcctatatacaactaagcatctaaggaaacacaaaa-caaccatcaacaatcaacaaatacagatcactccaccatta 101  T
Q  228 tacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattaca 327  Q
    |||||   |||||||||| |||||| |||| ||| |||||| |||||| |||| ||| ||| |  ||||||||||  |||| |||||||| || | ||||    
T  102 tacaattattcatcaatttatccaaccaatcataatttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataataca 201  T
Q  328 acaaaattaacatgattcattacccattcccctaagaatcatcatcaaaccctaaccctcaattt 392  Q
    | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  202 agaaaattaacatga-tcattacccattcccctcagaatcatcatcaaaccctaaccctcaattt 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 60 - 389
Target Start/End: Complemental strand, 2311 - 1983
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||  ||||||||||| |||||||| || |||||||||||| ||||| |    
T  2311 caaaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcagatgtttacaggtcctatata 2212  T
Q  160 caattaggcctct-aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    ||| ||||| | | |||| |||||||   ||  ||| |||||||||| |||||||| ||||||||||| |||| || ||||||||||||| |||||| |     
T  2211 caactaggcattttaaagaaacacaatt-cagccatcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactc 2113  T
Q  259 at-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcc 357  Q
    || | |||||||||| || |||| ||| |||||  |  |||||||  |||||| ||||||| | ||||||| | ||||||||| | |||||||||||| |    
T  2112 atcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaagagaattaacat-aatcattacccatt-c 2015  T
Q  358 cctaagaatcatcatcaaaccctaaccctcaa 389  Q
    | | | ||||||||||||||||||||||||||    
T  2014 catcaaaatcatcatcaaaccctaaccctcaa 1983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 60 - 389
Target Start/End: Complemental strand, 8988 - 8660
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||  ||||||||||| |||||||| || |||||||||||| ||||| |    
T  8988 caaaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcatatgtttacaggtcctatata 8889  T
Q  160 caattaggcctctaaaggaacacaaaaa-caaacattaacaacaacaattacagatcattccaccatcatacaaaacttcatcaattcatccaatcaatt 258  Q
    ||| ||||| | | || ||| ||| ||  ||  ||| |||||||||| |||||||| ||||||||||| |||| || ||||||||||||| |||||| ||    
T  8888 caactaggcattttaatgaa-acacaattcagccatcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactt 8790  T
Q  259 at-attttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattcattacccattcc 357  Q
    || | |||||||||| || |||| ||| |||||  |  |||||||  |||||| ||||||| | ||||||| | ||||||||| | |||||||||||| |    
T  8789 atcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaagagaattaacat-aatcattacccatt-c 8692  T
Q  358 cctaagaatcatcatcaaaccctaaccctcaa 389  Q
    | | | ||||||||||||||||||||||||||    
T  8691 catcataatcatcatcaaaccctaaccctcaa 8660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 61 - 345
Target Start/End: Complemental strand, 23005 - 22722
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| | ||||||    
T  23005 aaaacctacgggtttaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtccgatacac 22906  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||||| ||||||  ||| ||||||||||||| ||| |||||| | | |||||||||||||||  ||||| ||| ||   |||     
T  22905 aactaggcatctaaaggaacac-aaaacatgcatcaacaacaacaatt-caggtcattctagcaatcatacaaaacttctccaatttatcaaacagattc 22808  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    || ||||| |||| || | || |||||||   |||||||||||||  |||| |||||| || ||||||||| | | ||||||||||    
T  22807 taatttcattcaaattcttatcacaacaatgttatagattaagaaaccattttgaacaccaaattacaacacattaaacatgattc 22722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 15346 - 15201
Alignment:
Q  62 aaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacaca 161  Q
    |||| |||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  15346 aaacctacgggtttaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacaca 15247  T
Q  162 attaggcctctaaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    | ||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  15246 actaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt 15201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 61 - 317
Target Start/End: Original strand, 16464 - 16718
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| |||||||||| |||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  16464 aaaacctacgggttcaaacctcttctcactccaaaa-cccaattttgatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacac 16562  T
Q  161 aattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaatta 259  Q
    || ||||| ||||||||||| | ||||||  ||| ||||||||||||| |||||||||| | | |||||||||||| ||  |||||   |||| |||||     
T  16563 aactaggcatctaaaggaacgc-aaaacaggcatcaacaacaacaatt-cagatcattctagcaatcatacaaaacctctccaattttcccaaccaattc 16660  T
Q  260 tattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
    ||   ||  |||| || |||| ||||||||| ||||||||||||| ||||||||||||    
T  16661 taacctccctcaaattatgatcacaacaacattatagattaagaaatcattctgaaca 16718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 16811 - 16880
Alignment:
Q  409 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacctgaattca 479  Q
    ||||||| ||||||||| ||||||| ||| |||  |||| |||||||||||||| ||||||||| ||||||    
T  16811 caattagatcaattttcagaaattatatactatg-attattgagagatagtctcacccttaccttaattca 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 330
Target Start/End: Complemental strand, 40934 - 40677
Alignment:
Q  67 tacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattag 166  Q
    |||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||    
T  40934 tacgggttcaaacctcttctcactccaaaagcccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacacaactag 40835  T
Q  167 gcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattcca-ccatcatacaaaacttcatcaattcatccaatcaattatatttt 265  Q
    || ||||||||||||| ||||||        || ||    || |||||||||| | | |||||||||||||||  ||||| |||||| | ||| || |||    
T  40834 gcatctaaaggaacac-aaaaca------ggcagcagatgtttcagatcattctagcaatcatacaaaacttctccaatttatccaaccgattctaattt 40742  T
Q  266 caatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    || |||| || |||| ||| ||||| ||||||||||||| ||||||||||||||| |||||||||    
T  40741 cattcaaattctgatcacatcaacattatagattaagaaatcattctgaacatcaaattacaaca 40677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 73 - 345
Target Start/End: Original strand, 72939 - 73210
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||| ||| | ||     
T  72939 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacacaactagacatcg 73038  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    ||||||||||||||  |  ||||||||||| | ||| ||  |||||||| || |||||||||||||  ||||||||| ||| ||||  || | ||| ||     
T  73039 aaaggaacacaaaat-atgcattaacaacatccatt-caactcattccaacaatcatacaaaactttctcaattcattcaaccaatcctaatatcattcc 73136  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    | || |||    | ||||| ||||||||||||| |||| | |||||||| ||||||||| | | ||||||||||    
T  73137 aattctgaacgtagcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattc 73210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 15410 - 15254
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    ||||| |||||||| || |||| | |||||||||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  15410 aaaacctacgggtttcaaaccttttctcactccaaaa-cccaattttaatcccctgatcacccaaagcgttttccaacagatgtttacaggttcaataca 15312  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaattacagatcattc 219  Q
    ||| ||||| ||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  15311 caactaggcatctaaaggaacac-aaaacaggcatcaacaacaacaatt-cagatcattc 15254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 116540 - 116686
Alignment:
Q  61 aaaacttacgggtt-cagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    ||||| |||||||| ||||||  | |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||    
T  116540 aaaacctacgggtttcagaccctttctcactccaaaa-cccaattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtccaataca 116638  T
Q  160 caattaggcctctaaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    ||| ||||| |||||||||||||||||||| ||| |||||| |||||||    
T  116639 caactaggcatctaaaggaacacaaaaacagaca-taacaataacaatt 116686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 129037 - 128912
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||||||||||||  |||||| |||    
T  129037 aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaaca-taaaacataca 128939  T
Q  194 ttaacaacaacaattacagatcattcca 221  Q
    | ||||||||||||| ||| ||||||||    
T  128938 tcaacaacaacaatt-cagctcattcca 128912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 116746 - 116794
Alignment:
Q  269 tcaatttgtgatgacaacaacagtatagattaagaattcattctgaaca 317  Q
    |||| || |||| ||||||||| ||||||||||||| ||||||||||||    
T  116746 tcaaattctgatcacaacaacattatagattaagaaatcattctgaaca 116794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 11408 - 11275
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| ||||||||||||||| || ||| |||||||||||||||||| |||| |||||||| || |||||||||||| ||||||||| |||||| |||    
T  11408 ttcagacttctcctcactccaaacacgcaattttaatcccctgatcacc-aaaatgttttccagcaaatgtttacaggtcctatacacagttaggcatct 11310  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    |||||||||| |||||| |||| |||||||||||||    
T  11309 aaaggaacac-aaaacagacatcaacaacaacaatt 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 73 - 253
Target Start/End: Complemental strand, 2132 - 1951
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggc-ctc 171  Q
    ||||||| ||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||  |     
T  2132 ttcagacttcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatta 2033  T
Q  172 taaaggaacacaaaaacaaacattaacaacaacaattacag-atcattccaccatcatacaaaacttcatcaattcatccaat 253  Q
    ||||| ||||| ||  ||| ||| ||||||||||||||||| ||||||| |||||||| | ||  ||||||||||||| ||||    
T  2032 taaagaaacac-aattcaaccatcaacaacaacaattacagaatcattctaccatcatcccaatattcatcaattcatacaat 1951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 23983 - 23857
Alignment:
Q  60 caaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctataca 159  Q
    |||||| ||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||  ||||||||||| |||||||    
T  23983 caaaacctacggtttcatacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcaattgtttacaggtcctataca 23884  T
Q  160 caattaggcctctaaaggaacacaaaa 186  Q
    ||| |||||  | ||||||||||||||    
T  23883 caactaggcaccgaaaggaacacaaaa 23857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 23758 - 23699
Alignment:
Q  286 caacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||| | | ||||||||||    
T  23758 caacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattc 23699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 10962 - 10837
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||     
T  10962 aaaacttacgatttcagacttctcctcactccttaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacat 10863  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    || ||||| || ||||||||||||||    
T  10862 aactaggcatcgaaaggaacacaaaa 10837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 493438 - 493315
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||    
T  493438 aaaacttacgatttcagacatctcttcactccaaaaacccaattttaatcccctggtcacccaaaacgttttccagca-atgtttacaggtcctatacac 493340  T
Q  161 aattaggcctctaaaggaacacaaa 185  Q
    || |||||  | |||||||||||||    
T  493339 aactaggcaccgaaaggaacacaaa 493315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 67; Significance: 2e-29; HSPs: 6)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 679 - 797
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||| ||||| ||    
T  679 aaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttacaggtcctatatac 778  T
Q  161 aattaggcctctaaaggaa 179  Q
    || ||||  ||||||||||    
T  779 aactaggtgtctaaaggaa 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 7824 - 7942
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||| ||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||| ||||| ||    
T  7824 aaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttacaggtcctatatac 7923  T
Q  161 aattaggcctctaaaggaa 179  Q
    || ||||  ||||||||||    
T  7924 aactaggtgtctaaaggaa 7942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 807 - 901
Alignment:
Q  236 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    |||||||||| ||||||||  | ||| || |||||||||| |||| ||| |||||  | ||||||||  ||||||||||||||||||||||||||    
T  807 ttcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 7952 - 8046
Alignment:
Q  236 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaaca 330  Q
    |||||||||| ||||||||  | ||| || |||||||||| |||| ||| |||||  | ||||||||  ||||||||||||||||||||||||||    
T  7952 ttcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 472
Target Start/End: Original strand, 921 - 984
Alignment:
Q  408 gcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacct 472  Q
    |||||||||||||||||| |||| || | |||||  |||| |||||||||||||| |||||||||    
T  921 gcaattaggtcaattttcagaaactatagattatg-attattgagagatagtctcacccttacct 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 472
Target Start/End: Original strand, 8066 - 8129
Alignment:
Q  408 gcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctctcccttacct 472  Q
    |||||||||||||||||| |||| || | |||||  |||| |||||||||||||| |||||||||    
T  8066 gcaattaggtcaattttcagaaactatagattatg-attattgagagatagtctcacccttacct 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 94 - 208
Target Start/End: Complemental strand, 81593 - 81480
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||  ||||||  ||    
T  81593 aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaaca-taaaacaggca 81495  T
Q  194 ttaacaacaacaatt 208  Q
    | |||||||||||||    
T  81494 tcaacaacaacaatt 81480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 79890 - 79783
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| | | ||||||||| || ||||| ||||| || | ||     
T  79890 ttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatatacaatcagacatca 79792  T
Q  173 aaaggaaca 181  Q
    |||||||||    
T  79791 aaaggaaca 79783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 1012 - 1146
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |   ||||||||||| ||| |||||| ||||| ||     
T  1012 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacattttccagcgattgtttacaggtcctaaacacaactaggcatca 1111  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    || |||| || |||||| |||| |||||||||||||    
T  1112 aagggaatac-aaaacagacatcaacaacaacaatt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 1493 - 1580
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaaca 181  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||||||||||||    
T  1493 aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaaca 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 1055 - 1186
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaa 184  Q
    |||||||||||| || || ||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||| || ||||| ||||||||||||| |    
T  1055 ctcactccaaaa-cctaattttaatcccctgatcacccaaaacgttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacac-a 1152  T
Q  185 aaacaaacattaacaacaacaattacagatcattc 219  Q
    |||||  ||| ||||||||||||| ||||||||||    
T  1153 aaacaggcatcaacaacaacaatt-cagatcattc 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 1744 - 1857
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| |||| ||||||||||||| ||||||  ||    
T  1744 aaaacccaattttaatcccctgatcacccaaaacgttttccataaaatgtttacaggttctatatataataaggcatctaaaggaacac-aaaacatgca 1842  T
Q  194 ttaacaacaacaatt 208  Q
    | |||||||||||||    
T  1843 tcaacaacaacaatt 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 65752 - 65820
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaa 162  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  65752 aaaacccaattttaatcccttgatcacccaaaacgttttccaacaaatgtttacaggttcaatacacaa 65820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 18842 - 18718
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||| |||| |||  | |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||    
T  18842 aaaacttacggtttcaaaccctttctcattccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacacgttcaatatac 18744  T
Q  161 aattaggcctctaaaggaacacaaaa 186  Q
    || ||||| |||||||||||| ||||    
T  18743 aactaggcatctaaaggaacataaaa 18718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 18264 - 18386
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| |||| |||||| |||||||||| |||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||    
T  18264 aaaacttacgatttcagacttctcttcactctaaaaacccaattttaatcccctgatca-ccaaaacgttttccagca-atgtttacaggtcctatacac 18361  T
Q  161 aattaggcctctaaaggaacacaaa 185  Q
    || |||||  | |||||||||||||    
T  18362 aactaggcaccgaaaggaacacaaa 18386  T

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Target: scaffold0023 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 345
Target Start/End: Original strand, 135103 - 135364
Alignment:
Q  81 tctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaac 180  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||   | ||||||||| || ||||||||||  || | || ||||||||    
T  135103 tctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc-tgaaatgtttacaagtcctatacacaaccagacatc-aaaggaac 135200  T
Q  181 acaaaaacaaacattaacaacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatca-attatattttcaatcaatttgtg 278  Q
    | || || |||||| ||||||||||||| |||  ||||| | || ||||||||||||||  |||||||||| |||| ||| |||||||| || | || ||    
T  135201 agaacaataaacatcaacaacaacaatt-cagcccattcaagcattcatacaaaacttc-ccaattcatcc-atcatattctattttcattccaattttg 135297  T
Q  279 atgac-aacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgattc 345  Q
    || || | |||||  |||||||||||| |||| || ||||||| ||||||||| ||| ||| ||||||    
T  135298 atcacgatcaacaacatagattaagaaatcatact-aacatcaaattacaacacaataaacctgattc 135364  T

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Target: scaffold0019 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 343
Target Start/End: Original strand, 135227 - 135396
Alignment:
Q  173 aaaggaacacaaaaacaaacattaacaacaacaattacagatcattccacca-tcatacaaaacttcatcaattcatccaatcaattatattttcaatca 271  Q
    |||||||||||||| ||  ||| ||||||||||||| |||||||||||| || ||||||||||||||  |||||  ||||| | ||| || ||||| |||    
T  135227 aaaggaacacaaaa-caggcatcaacaacaacaatt-cagatcattccagcaatcatacaaaacttctccaatttttccaaccgattctaatttcattca 135324  T
Q  272 atttgtgatgacaacaacagtatagattaagaattcattctgaacatcacattacaacaaaattaacatgat 343  Q
    | || |||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||| | | ||||||||    
T  135325 aattctgatcacaacaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacatgat 135396  T

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Target: scaffold0348 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 9015 - 9103
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaa 162  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||| || ||||||||||    
T  9015 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatacacaa 9103  T

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Target: scaffold0094 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 51919 - 52035
Alignment:
Q  92 caaaaacccaactttaatcccc-tgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaa 190  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||| ||||||||  ||||||     
T  51919 caaaaacccaattttaatccccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatcttaaggaaca-taaaacag 52017  T
Q  191 acattaacaacaacaatt 208  Q
     ||| |||||||||||||    
T  52018 gcatcaacaacaacaatt 52035  T

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Target: scaffold0085 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 4072 - 3939
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctct 172  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||   | || |||||| || ||||||||||  || | ||     
T  4072 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc-tgaaatatttacaagtcctatacacaaccagacatc- 3975  T
Q  173 aaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    ||||||||| ||||  |||||| |||||||||||||    
T  3974 aaaggaacagaaaactaaacatcaacaacaacaatt 3939  T

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Target: scaffold2054 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 365 - 426
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  365 ttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 426  T

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Target: scaffold0169 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 6648 - 6759
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaaca 193  Q
    ||||| ||| ||||||||||||||||||| |||||| |||||| | ||||||||| |||| ||| ||||| |||| ||||||||||||| |||||| |||    
T  6648 aaaactcaattttaatcccctgatcacccgaaacgtattccaaaagatgtttacaagttcaatatacaataaggcatctaaaggaacac-aaaacataca 6746  T
Q  194 ttaacaacaacaa 206  Q
    | |||||||||||    
T  6747 tcaacaacaacaa 6759  T

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Target: scaffold0031 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 121578 - 121670
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaa 186  Q
    ||||||||| |||||||||||||||||||||||||| |||||| | ||||||| ||||||  || ||||| |||| |||||||||||||||||    
T  121578 aaaacccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttaaaggttcattatacaataaggcatctaaaggaacacaaaa 121670  T

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Target: scaffold0031; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 132455 - 132547
Alignment:
Q  94 aaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaa 186  Q
    ||||||||| |||||||||||||||||||||||||| |||||  | ||||||| ||||||  || ||||| |||| |||||||||||||||||    
T  132455 aaaacccaattttaatcccctgatcacccaaaacgtattccagaagatgtttataggttcattatacaataaggcatctaaaggaacacaaaa 132547  T

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Target: scaffold0384 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 16450 - 16401
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttcc 134  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16450 ctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 16401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 3014 - 2914
Alignment:
Q  85 ctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaa 184  Q
    |||||||||||| || || |||||||||||||||||||||||||| |||||| | ||||||||||||||  ||  |||  |||| |||||||||||||||    
T  3014 ctcactccaaaatcc-aattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcattatgcaacaaggcatctaaaggaacacaa 2916  T
Q  185 aa 186  Q
    ||    
T  2915 aa 2914  T

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Target: scaffold0249 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 14304 - 14197
Alignment:
Q  61 aaaacttacgggttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctatacac 160  Q
    ||||||||||  ||||||| ||||  |||||||||||||||| |||||||||| |||| |||||||||||||||| |   ||||||||||   |||||||    
T  14304 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 14205  T
Q  161 aattaggc 168  Q
    || |||||    
T  14204 aactaggc 14197  T

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Target: scaffold1913 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 892 - 933
Alignment:
Q  479 aattgcacaaccagctacagcaaaatcgatcccttcttgttc 520  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  892 aattacacaaccagctacagcaaaatcgatcccttcttgttc 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Complemental strand, 5193 - 5157
Alignment:
Q  484 cacaaccagctacagcaaaatcgatcccttcttgttc 520  Q
    |||||||||||||||||||||||||||||||||||||    
T  5193 cacaaccagctacagcaaaatcgatcccttcttgttc 5157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 15917 - 15953
Alignment:
Q  484 cacaaccagctacagcaaaatcgatcccttcttgttc 520  Q
    |||||||||||||||||||||||||||||||||||||    
T  15917 cacaaccagctacagcaaaatcgatcccttcttgttc 15953  T

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Target: scaffold0131 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 655 - 738
Alignment:
Q  73 ttcagacctctcctcactccaaaaacccaactttaatcccctgatcacccaaaacgttttccaacacatgtttacaggttctata 157  Q
    |||||||  ||||||||||||||||||||| ||||||||||   |||||||||||| ||||||| | ||||||||| || |||||    
T  655 ttcagactcctcctcactccaaaaacccaattttaatccccaattcacccaaaacg-tttccaagaaatgtttacaagtcctata 738  T

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Target: scaffold0600 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 438 - 523
Alignment:
Q  122 caaaacgttttccaacacatgtttacaggttctatacacaattaggcctctaaaggaacacaaaaacaaacattaacaacaacaatt 208  Q
    |||||||| |||||| | ||||||||||||||  || |||| ||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  438 caaaacgtattccaaaagatgtttacaggttcattatacaactaggcatctaaaggaacac-aaaacatgcatcaacaacaacaatt 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 12595 - 12650
Alignment:
Q  73 ttcagacctctcctcactccaaaaa-cccaacttt-aatcccctgatcacccaaaa 126  Q
    ||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  12595 ttcagacttctcctcactccaaaaaacccaatttttaatcccctgatcacccaaaa 12650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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