View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2532_high_19 (Length: 341)
Name: NF2532_high_19
Description: NF2532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2532_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 48612146 - 48612455
Alignment:
| Q |
17 |
atatcatgcataatcnnnnnnnttaaatgtcatgttaaataacaaatgaaagtttaatattatcaaactgataatttgtcactctatgtaaacgtaaatc |
116 |
Q |
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| T |
48612146 |
atatcatgcataatcaaaaaaattaaatgtcatgttaaataataaatgaaagtttaatattatcaaattgataatttgtcactctatgtaaacgtaaatc |
48612245 |
T |
|
| Q |
117 |
aaattacatatttaaatacgtttatatgaagtagacttttgaacatgctaaaatgttatatcagacttttaaaaagtcaaactccgaccaaaagaaataa |
216 |
Q |
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|||||| |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
48612246 |
aaattatctatttaaatacgttcatatgaagtagacttttgaacatgctaacatgtcatatcagacttttaaaaagtcaaactccgacaaaaagaaataa |
48612345 |
T |
|
| Q |
217 |
gcttatgagcaagctacatgctagatttaaaccttaaannnnnnnccggttcaaacttaaacattgcaaagtttagtttgacctaacctattctcacctc |
316 |
Q |
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|||||||| | ||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
48612346 |
gcttatgaac-agctacatgttagatttaaaccttaatattttttaccgtttaaacttaaacattgcaaagtttaatttgacctaacctattctcacctc |
48612444 |
T |
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| Q |
317 |
tatgtattagt |
327 |
Q |
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||||||||||| |
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| T |
48612445 |
tatgtattagt |
48612455 |
T |
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