View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2532_low_13 (Length: 405)
Name: NF2532_low_13
Description: NF2532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2532_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 48 - 383
Target Start/End: Original strand, 16643081 - 16643416
Alignment:
| Q |
48 |
cactacgtgtaatgctcttcaatgaagaatatatatgttgtacatgtgaaactcaacctagtcagcattatcaaaatatagtttataaactatatcttat |
147 |
Q |
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| T |
16643081 |
cactatgtgtaatgctcttcaatgaagaatatatatgttgtacatgtgaaactcaacctagtcagcattctcaaaatatagtatataaactatatcttat |
16643180 |
T |
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| Q |
148 |
ctaaaatgtggttgatgattcattttgggactcctttgttttttcctttcttacattatttgtttcatatcataacatgcaatcctcacattagttcaga |
247 |
Q |
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| T |
16643181 |
ctaaaatgtggttgatgattcattttgggactcctttgttttttcctttcttacattatttgtttcatatcataacatgcaatcctcacattagttcaga |
16643280 |
T |
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| Q |
248 |
caaaaattgcgtgagggacacgttagtctctctatttcgttacatccaaaagtgactaattatctgcgtgtaggatagcaaattgtgatcaattattaag |
347 |
Q |
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| T |
16643281 |
caaaaattgcgcgagggacacgttagtctctctatttcgttacatccaaaagtgactaattatctgcgtgtaggatagcaaattgtgatcaattattatg |
16643380 |
T |
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| Q |
348 |
ggtcaaattagtctacatattcaccatctctttgaa |
383 |
Q |
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| T |
16643381 |
ggtcaaattagtctacatattcaccatttctttgaa |
16643416 |
T |
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