View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2534_high_7 (Length: 419)
Name: NF2534_high_7
Description: NF2534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2534_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 124 - 402
Target Start/End: Original strand, 2488075 - 2488353
Alignment:
| Q |
124 |
ggtatccaactaaagatcgattaattcaagagattaatatctctatctactaataagggactcaattaaaatcaaaccaaaactttgtatagactaatcc |
223 |
Q |
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| T |
2488075 |
ggtatccgactaaagatcgattaattcaagagattaatttctctatctactaataagggattcaattaaaatcaaaccaaaactttgtatagactaatcc |
2488174 |
T |
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| Q |
224 |
aacataaaaattgttgacactagcatagtttgtacaagaaaattacattcctaaattctaaactctcaaatgtaaagtgtcgaaaagatttgaacttttt |
323 |
Q |
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| T |
2488175 |
aacataaaaattgttgacactagcatagtttgaacaagaaaattacattcctaaattctaaactctcaaatgtaaagtgtcgaaaagatttgaacttttt |
2488274 |
T |
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| Q |
324 |
gagattgcatggaattatattataacccgtagcagctcatatgaacaaaaataaggcaacaatgagcattgagagattg |
402 |
Q |
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| T |
2488275 |
gagattgcatggaattatattataacccgtagcagctcatatgaacaaaaataaggcaacaatgagcattgagagattg |
2488353 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 2487970 - 2488013
Alignment:
| Q |
19 |
atataatatgtactcatctctagctatatttgaatttctttaac |
62 |
Q |
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| T |
2487970 |
atataatatgtacttatctctagctatatttgaatttctttaac |
2488013 |
T |
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