View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2535_high_10 (Length: 301)
Name: NF2535_high_10
Description: NF2535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2535_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 4 - 285
Target Start/End: Complemental strand, 965136 - 964850
Alignment:
| Q |
4 |
agaccctctttctctctacagatatagatatacatacacataaaat-----gatataagctagtgttaaaaatcacgaggatcaacaaaaattactgatg |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
965136 |
agaccctctttctctctacagatatagatatacatacacataaaataaaatgacataagctagtgttaaaaatcacgaggatcaacaaaaattactgatg |
965037 |
T |
|
| Q |
99 |
aagaagatctataattgaaccaatctgagggtccacatttttcattgatactatcatccttcttcatgtgttcaagactcttaatgcaccacatgtcctc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
965036 |
aagaagatctataattgaaccaatctgagggtccacatttttcattgatactatcatccttcttcatgtgttcaagactcttaatgcaccacatgtcctc |
964937 |
T |
|
| Q |
199 |
agcccaagataatttcctccaatgtgggatcacttctctaactgggtccctttgactcacttcagtcacaatggccccacaaccacc |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
964936 |
agcccaagataatttcctccaatgtgggatcacttctctaactgggtccctttgactcacttcagtcacaatggccccacaaccacc |
964850 |
T |
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