View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2535_low_18 (Length: 243)
Name: NF2535_low_18
Description: NF2535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2535_low_18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 35994716 - 35994954
Alignment:
| Q |
5 |
atgaaatctgagatacatacacagcatgcacgctaattcaccaaacttgtacattaagattaattaattaattacttccttctgaagtatataaacattt |
104 |
Q |
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| T |
35994716 |
atgaaatctgagatacatacacagcatgcatgctaattcaccaaacttgtacattaagattaattaattaattacttccttctgaagtatataaacattt |
35994815 |
T |
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| Q |
105 |
atcttttgtaagttttctttgctatatgactttactatcttttaaagaaaatgtcatgcttaattgcttatagataaacaactcttctaatcaactacag |
204 |
Q |
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| T |
35994816 |
atcttttgtaagttttctttgctatatgactttactatcttttaaagaaaatgtcatgcttaattgcttatagataaacaactcttctaatcaactacag |
35994915 |
T |
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| Q |
205 |
cttaagattaaccctaaaatttgcttagatcctttgcat |
243 |
Q |
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| T |
35994916 |
cttaagattaaccctaaaatttgcttagatcctttgcat |
35994954 |
T |
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