View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2536_high_8 (Length: 240)
Name: NF2536_high_8
Description: NF2536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2536_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 49 - 223
Target Start/End: Original strand, 32519870 - 32520044
Alignment:
| Q |
49 |
atttcttttacaggtgtattattgttctgattaagagagaacagaaaaatgaacattaaaaggacaataataagatgcaagacaagacatcacttaaagt |
148 |
Q |
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| T |
32519870 |
atttcttttacaggtgtattactgttctgattaagagagaacagaaaaatgaacattaaaaggacaataataagatgcaagacaagacatcacttaaagt |
32519969 |
T |
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| Q |
149 |
acaagttcaagttgatgagaaattcttttcgacacatatcccattaactggatttgttttggcaactcggccatg |
223 |
Q |
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| T |
32519970 |
acaagttcaagttgatgagaaattcttttcgacacatatcccattaactggatttgttttggcaacttggccatg |
32520044 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 32518384 - 32518420
Alignment:
| Q |
19 |
tactactaatggatattgtcacttccatttatttctt |
55 |
Q |
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| T |
32518384 |
tactactaatggatattgtcacttccattaatttctt |
32518420 |
T |
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