View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2537_high_8 (Length: 252)
Name: NF2537_high_8
Description: NF2537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2537_high_8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 30497857 - 30498101
Alignment:
| Q |
10 |
ataattcttgatcagacaatacctatcttatggtcgaagtttagattatcaagaaccctttcctctaaaaaccgaagagttnnnnnnnnnnnnnnnnnnn |
109 |
Q |
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| T |
30497857 |
ataattcttgattagacaatacctatcttatggtcgaagtttagattatcaagaactctttcctctaaaaaccgaagggttaaaaaaaatggtaaaaaaa |
30497956 |
T |
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| Q |
110 |
tatttgcattgatactaaatttaga--atatacatgcactttctatttatatgcaatttttgacttttctttggtttgatcagttaagcctaaactcaaa |
207 |
Q |
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|||||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30497957 |
tatttgcattgagactaaatttggattatatacatgcactttttatttatatgcaatttttgacttttctttggtttgatcagttaagcctaaactcaaa |
30498056 |
T |
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| Q |
208 |
ttctaaaaaatgagtgttagcttccttttctaagaacatcctgta |
252 |
Q |
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| T |
30498057 |
ttctaaaaaatgagtgttagcttccttttctaagaacatcctgta |
30498101 |
T |
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