View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2538_low_5 (Length: 428)

Name: NF2538_low_5
Description: NF2538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2538_low_5
NF2538_low_5
[»] scaffold0013 (1 HSPs)
scaffold0013 (41-184)||(73905-74048)
[»] chr4 (42 HSPs)
chr4 (41-184)||(20163235-20163378)
chr4 (41-184)||(20157781-20157924)
chr4 (41-184)||(20160457-20160600)
chr4 (41-184)||(15224419-15224562)
chr4 (41-171)||(14954778-14954908)
chr4 (41-172)||(10712244-10712375)
chr4 (41-172)||(10926014-10926145)
chr4 (41-177)||(631339-631475)
chr4 (41-171)||(5757516-5757647)
chr4 (41-171)||(9555919-9556050)
chr4 (41-171)||(12487074-12487205)
chr4 (41-171)||(14758013-14758144)
chr4 (41-171)||(33741769-33741900)
chr4 (44-177)||(17048698-17048831)
chr4 (41-171)||(4561911-4562042)
chr4 (85-171)||(25689292-25689378)
chr4 (283-344)||(9555565-9555626)
chr4 (283-344)||(12486720-12486781)
chr4 (283-344)||(14758436-14758497)
chr4 (283-344)||(14955201-14955262)
chr4 (283-344)||(25688938-25688999)
chr4 (283-344)||(33741335-33741396)
chr4 (283-344)||(4562295-4562356)
chr4 (283-344)||(5757820-5757881)
chr4 (283-344)||(15223815-15223876)
chr4 (41-172)||(37018300-37018431)
chr4 (41-127)||(17809707-17809794)
chr4 (41-114)||(3484802-3484875)
chr4 (85-171)||(27533400-27533486)
chr4 (41-114)||(13592540-13592613)
chr4 (41-113)||(14548478-14548550)
chr4 (41-92)||(15042328-15042379)
chr4 (41-92)||(15112045-15112096)
chr4 (41-92)||(25090441-25090492)
chr4 (41-104)||(35812637-35812700)
chr4 (41-95)||(16997311-16997365)
chr4 (299-344)||(15353677-15353722)
chr4 (299-344)||(36134286-36134331)
chr4 (41-81)||(27533457-27533497)
chr4 (52-91)||(3484792-3484831)
chr4 (52-92)||(13592584-13592624)
chr4 (41-81)||(25689349-25689389)
[»] chr3 (87 HSPs)
chr3 (41-184)||(15464479-15464622)
chr3 (41-184)||(14665030-14665173)
chr3 (41-184)||(14668186-14668329)
chr3 (41-184)||(4589499-4589642)
chr3 (41-184)||(19774947-19775090)
chr3 (41-184)||(12339081-12339223)
chr3 (41-184)||(8489773-8489913)
chr3 (41-171)||(15964337-15964467)
chr3 (41-171)||(15968261-15968391)
chr3 (41-171)||(15972185-15972315)
chr3 (41-171)||(37440223-37440353)
chr3 (41-184)||(16750927-16751070)
chr3 (41-184)||(17317714-17317857)
chr3 (41-171)||(4107985-4108116)
chr3 (41-171)||(4111837-4111968)
chr3 (41-171)||(7109088-7109219)
chr3 (41-171)||(7113023-7113154)
chr3 (41-171)||(11069460-11069591)
chr3 (41-171)||(14498717-14498848)
chr3 (50-177)||(16795895-16796022)
chr3 (41-171)||(22321056-22321187)
chr3 (41-171)||(22336111-22336242)
chr3 (41-171)||(27410230-27410361)
chr3 (41-171)||(28949114-28949245)
chr3 (53-177)||(12852908-12853032)
chr3 (41-171)||(15616766-15616897)
chr3 (41-171)||(55022257-55022388)
chr3 (50-171)||(11166124-11166246)
chr3 (41-125)||(5222761-5222845)
chr3 (283-344)||(4108249-4108310)
chr3 (283-344)||(4112101-4112162)
chr3 (283-344)||(7108734-7108795)
chr3 (283-344)||(7112669-7112730)
chr3 (283-344)||(15616673-15616734)
chr3 (283-344)||(15963974-15964035)
chr3 (283-344)||(15967898-15967959)
chr3 (283-344)||(15971822-15971883)
chr3 (283-344)||(22320702-22320763)
chr3 (283-344)||(22335757-22335818)
chr3 (283-344)||(28948880-28948941)
chr3 (283-344)||(30064885-30064946)
chr3 (284-344)||(14159826-14159886)
chr3 (286-344)||(14498443-14498501)
chr3 (41-184)||(14670442-14670593)
chr3 (283-344)||(11166538-11166599)
chr3 (283-344)||(16751652-16751713)
chr3 (283-344)||(19774451-19774512)
chr3 (283-344)||(27411088-27411149)
chr3 (283-344)||(55022023-55022084)
chr3 (41-184)||(14681964-14682115)
chr3 (283-344)||(11069186-11069247)
chr3 (283-344)||(17318147-17318208)
chr3 (298-344)||(14067598-14067644)
chr3 (52-180)||(14440975-14441104)
chr3 (41-91)||(13543677-13543727)
chr3 (41-114)||(2842666-2842739)
chr3 (41-114)||(18700874-18700947)
chr3 (299-344)||(31097889-31097934)
chr3 (41-90)||(46821920-46821969)
chr3 (41-104)||(10543019-10543082)
chr3 (85-171)||(30065372-30065459)
chr3 (299-344)||(7793697-7793742)
chr3 (41-82)||(12120178-12120219)
chr3 (73-130)||(14067289-14067346)
chr3 (52-104)||(13520978-13521030)
chr3 (41-92)||(35353358-35353409)
chr3 (52-114)||(15565309-15565371)
chr3 (299-344)||(327512-327557)
chr3 (299-344)||(1983181-1983226)
chr3 (271-308)||(11301201-11301238)
chr3 (271-308)||(11854022-11854059)
chr3 (41-114)||(14441075-14441148)
chr3 (271-308)||(15464258-15464295)
chr3 (299-344)||(20461847-20461892)
chr3 (41-82)||(38962296-38962337)
chr3 (127-171)||(5220536-5220580)
chr3 (299-339)||(15482393-15482433)
chr3 (41-92)||(10562476-10562527)
chr3 (41-88)||(42353684-42353731)
chr3 (45-91)||(19884816-19884862)
chr3 (299-344)||(3403327-3403372)
chr3 (299-344)||(7574721-7574766)
chr3 (41-114)||(43890184-43890257)
chr3 (41-89)||(5214723-5214771)
chr3 (299-339)||(11557756-11557796)
chr3 (52-92)||(15565298-15565338)
chr3 (41-81)||(44269408-44269448)
[»] chr7 (58 HSPs)
chr7 (42-184)||(2832784-2832926)
chr7 (41-184)||(1859410-1859553)
chr7 (41-184)||(2530740-2530883)
chr7 (41-184)||(13919081-13919224)
chr7 (41-184)||(12705245-12705388)
chr7 (41-184)||(15083548-15083691)
chr7 (41-184)||(18425037-18425180)
chr7 (41-184)||(26291749-26291892)
chr7 (41-184)||(39721618-39721761)
chr7 (41-171)||(20487186-20487316)
chr7 (41-184)||(25927827-25927972)
chr7 (41-171)||(45170617-45170747)
chr7 (41-177)||(18301685-18301821)
chr7 (41-171)||(32498-32629)
chr7 (41-171)||(16113630-16113761)
chr7 (41-171)||(16116783-16116914)
chr7 (84-184)||(7519669-7519769)
chr7 (41-171)||(71353-71484)
chr7 (41-171)||(75462-75593)
chr7 (41-171)||(16907797-16907928)
chr7 (41-171)||(18282755-18282886)
chr7 (50-171)||(18278792-18278914)
chr7 (41-171)||(12718057-12718188)
chr7 (41-171)||(12722968-12723099)
chr7 (283-344)||(32144-32205)
chr7 (283-344)||(71817-71878)
chr7 (283-344)||(75926-75987)
chr7 (283-344)||(12705677-12705738)
chr7 (283-344)||(45171041-45171102)
chr7 (286-344)||(12717783-12717841)
chr7 (286-344)||(12722694-12722752)
chr7 (283-344)||(12713959-12714020)
chr7 (283-344)||(18278478-18278539)
chr7 (283-344)||(18282441-18282502)
chr7 (283-344)||(18424504-18424565)
chr7 (41-114)||(24274797-24274870)
chr7 (41-97)||(15605878-15605934)
chr7 (41-172)||(16585087-16585226)
chr7 (41-114)||(14257922-14257995)
chr7 (41-104)||(16579264-16579327)
chr7 (41-104)||(16586335-16586398)
chr7 (41-114)||(20585201-20585274)
chr7 (111-171)||(12714353-12714413)
chr7 (52-173)||(14257822-14257951)
chr7 (52-92)||(14933118-14933158)
chr7 (52-92)||(15356553-15356593)
chr7 (52-92)||(15360667-15360707)
chr7 (41-96)||(16461505-16461560)
chr7 (52-91)||(24274787-24274826)
chr7 (271-308)||(1859749-1859786)
chr7 (299-344)||(12317850-12317895)
chr7 (299-344)||(15605609-15605654)
chr7 (109-172)||(32300747-32300810)
chr7 (41-92)||(32300802-32300853)
chr7 (299-344)||(14152340-14152385)
chr7 (41-82)||(15082329-15082369)
chr7 (300-344)||(9446531-9446575)
chr7 (52-92)||(20585190-20585230)
[»] chr8 (29 HSPs)
chr8 (41-184)||(21828625-21828768)
chr8 (41-184)||(18863256-18863399)
chr8 (41-184)||(21386710-21386853)
chr8 (41-184)||(14398434-14398575)
chr8 (41-184)||(21410302-21410445)
chr8 (41-184)||(21804794-21804937)
chr8 (41-184)||(23913648-23913791)
chr8 (41-171)||(30940688-30940818)
chr8 (41-171)||(21973167-21973298)
chr8 (41-171)||(21977258-21977389)
chr8 (42-180)||(44385233-44385372)
chr8 (41-171)||(22111320-22111451)
chr8 (41-171)||(43251200-43251331)
chr8 (283-344)||(18863645-18863706)
chr8 (283-344)||(21828986-21829047)
chr8 (283-344)||(21977642-21977703)
chr8 (283-344)||(30941120-30941181)
chr8 (41-158)||(16413765-16413882)
chr8 (283-344)||(21973551-21973612)
chr8 (283-344)||(22111086-22111147)
chr8 (283-344)||(43250846-43250907)
chr8 (41-114)||(32121451-32121524)
chr8 (52-180)||(5760109-5760237)
chr8 (52-91)||(32121441-32121480)
chr8 (52-114)||(42819123-42819185)
chr8 (299-344)||(20856811-20856856)
chr8 (42-114)||(18833089-18833161)
chr8 (52-92)||(37515198-37515238)
chr8 (52-92)||(42819156-42819196)
[»] chr6 (66 HSPs)
chr6 (41-184)||(22074572-22074715)
chr6 (41-184)||(23414282-23414425)
chr6 (41-184)||(1643887-1644030)
chr6 (41-184)||(31478570-31478713)
chr6 (41-184)||(2076849-2076992)
chr6 (41-184)||(16623731-16623874)
chr6 (41-171)||(11566251-11566382)
chr6 (41-171)||(12619428-12619559)
chr6 (41-171)||(22862335-22862466)
chr6 (41-171)||(23394457-23394588)
chr6 (41-171)||(14471603-14471733)
chr6 (41-171)||(8243222-8243353)
chr6 (41-171)||(23989309-23989440)
chr6 (52-171)||(16759626-16759746)
chr6 (78-173)||(27556064-27556159)
chr6 (85-171)||(22948506-22948592)
chr6 (85-171)||(22952462-22952548)
chr6 (85-171)||(23870950-23871036)
chr6 (85-171)||(23874906-23874992)
chr6 (283-344)||(11565897-11565958)
chr6 (283-344)||(12619852-12619913)
chr6 (283-344)||(14471328-14471389)
chr6 (283-344)||(19869664-19869725)
chr6 (283-344)||(22948152-22948213)
chr6 (283-344)||(22952108-22952169)
chr6 (283-344)||(23394103-23394164)
chr6 (283-344)||(23414011-23414072)
chr6 (283-344)||(23870596-23870657)
chr6 (283-344)||(23874552-23874613)
chr6 (283-344)||(23988995-23989056)
chr6 (283-344)||(31479227-31479288)
chr6 (283-344)||(16623057-16623118)
chr6 (283-344)||(16759272-16759333)
chr6 (42-123)||(23538215-23538296)
chr6 (41-171)||(19869978-19870110)
chr6 (283-344)||(8242909-8242970)
chr6 (52-180)||(19656762-19656891)
chr6 (42-104)||(15705942-15706004)
chr6 (41-91)||(34963068-34963118)
chr6 (41-98)||(17742865-17742922)
chr6 (41-104)||(22805439-22805502)
chr6 (44-91)||(23992125-23992172)
chr6 (50-104)||(16759727-16759781)
chr6 (41-95)||(17105348-17105402)
chr6 (85-171)||(18918006-18918092)
chr6 (41-172)||(19774065-19774204)
chr6 (41-95)||(27126611-27126665)
chr6 (41-114)||(19656626-19656699)
chr6 (52-111)||(15705985-15706044)
chr6 (52-103)||(20182389-20182440)
chr6 (72-123)||(20182402-20182453)
chr6 (72-123)||(22153538-22153589)
chr6 (52-103)||(22153551-22153602)
chr6 (52-98)||(17742832-17742878)
chr6 (299-344)||(17803911-17803956)
chr6 (299-344)||(25767477-25767522)
chr6 (41-82)||(27416512-27416553)
chr6 (299-344)||(27567981-27568026)
chr6 (44-92)||(7825433-7825481)
chr6 (52-92)||(17742805-17742845)
chr6 (52-92)||(19656695-19656735)
chr6 (69-113)||(19656746-19656790)
chr6 (41-81)||(22948563-22948603)
chr6 (41-81)||(22952519-22952559)
chr6 (41-81)||(23871007-23871047)
chr6 (41-81)||(23874963-23875003)
[»] scaffold0575 (1 HSPs)
scaffold0575 (41-184)||(6477-6620)
[»] scaffold0200 (1 HSPs)
scaffold0200 (41-184)||(11347-11490)
[»] scaffold0109 (3 HSPs)
scaffold0109 (41-184)||(36575-36718)
scaffold0109 (41-114)||(1064-1137)
scaffold0109 (52-91)||(1108-1147)
[»] chr5 (29 HSPs)
chr5 (41-184)||(11230498-11230641)
chr5 (41-184)||(18355594-18355737)
chr5 (41-184)||(11224686-11224829)
chr5 (41-184)||(11220100-11220243)
chr5 (41-184)||(11228509-11228652)
chr5 (57-184)||(15237436-15237563)
chr5 (41-184)||(10752569-10752710)
chr5 (42-171)||(40724203-40724332)
chr5 (41-157)||(11226546-11226662)
chr5 (41-172)||(20295235-20295367)
chr5 (85-184)||(24767898-24767997)
chr5 (85-183)||(20911531-20911629)
chr5 (85-177)||(22108009-22108101)
chr5 (85-171)||(19473315-19473401)
chr5 (283-344)||(18355309-18355370)
chr5 (283-344)||(19473694-19473755)
chr5 (283-344)||(20294936-20294997)
chr5 (283-344)||(40724546-40724607)
chr5 (283-344)||(10752070-10752131)
chr5 (300-344)||(11220001-11220045)
chr5 (300-344)||(11224587-11224631)
chr5 (300-344)||(11228410-11228454)
chr5 (300-344)||(11230399-11230443)
chr5 (41-89)||(22107998-22108046)
chr5 (299-344)||(17410194-17410239)
chr5 (299-344)||(24221578-24221623)
chr5 (283-312)||(20911880-20911909)
chr5 (41-81)||(19473304-19473344)
chr5 (41-81)||(24767887-24767927)
[»] chr2 (33 HSPs)
chr2 (41-184)||(1282765-1282908)
chr2 (41-183)||(31344516-31344657)
chr2 (41-184)||(9784387-9784530)
chr2 (41-171)||(41531591-41531721)
chr2 (41-171)||(30345602-30345732)
chr2 (41-171)||(24629065-24629196)
chr2 (41-171)||(27380018-27380149)
chr2 (41-171)||(27384064-27384195)
chr2 (41-171)||(27601181-27601312)
chr2 (41-171)||(10102239-10102370)
chr2 (41-132)||(12902102-12902193)
chr2 (41-171)||(24648744-24648875)
chr2 (283-344)||(10102818-10102879)
chr2 (283-344)||(24629489-24629550)
chr2 (283-344)||(24648390-24648451)
chr2 (283-344)||(27380362-27380423)
chr2 (283-344)||(27384408-27384469)
chr2 (283-344)||(30346025-30346086)
chr2 (283-344)||(41531983-41532044)
chr2 (283-344)||(1282486-1282547)
chr2 (283-344)||(27600867-27600928)
chr2 (41-114)||(32215401-32215474)
chr2 (41-114)||(17306253-17306326)
chr2 (42-95)||(36838989-36839042)
chr2 (41-82)||(38967085-38967126)
chr2 (41-92)||(24514974-24515025)
chr2 (41-92)||(28653715-28653766)
chr2 (52-91)||(32215445-32215484)
chr2 (299-344)||(19691982-19692027)
chr2 (299-344)||(24174501-24174546)
chr2 (41-82)||(24367447-24367488)
chr2 (300-344)||(24735117-24735161)
chr2 (299-344)||(24655708-24655753)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-184)||(208200-208342)
[»] scaffold0486 (2 HSPs)
scaffold0486 (41-184)||(9228-9372)
scaffold0486 (41-95)||(8201-8255)
[»] scaffold0031 (2 HSPs)
scaffold0031 (41-184)||(36697-36840)
scaffold0031 (299-344)||(53279-53324)
[»] scaffold0012 (1 HSPs)
scaffold0012 (41-184)||(189988-190131)
[»] chr1 (37 HSPs)
chr1 (41-184)||(39244505-39244648)
chr1 (41-184)||(39248060-39248203)
chr1 (50-184)||(21406733-21406867)
chr1 (52-184)||(41781895-41782027)
chr1 (41-184)||(20229593-20229736)
chr1 (41-184)||(33796896-33797039)
chr1 (41-184)||(41388605-41388748)
chr1 (41-177)||(22131466-22131602)
chr1 (41-171)||(1925740-1925870)
chr1 (41-171)||(20924754-20924884)
chr1 (41-177)||(48602865-48603001)
chr1 (41-172)||(16376044-16376176)
chr1 (41-171)||(1010112-1010243)
chr1 (41-171)||(52638930-52639061)
chr1 (283-344)||(1009758-1009819)
chr1 (283-344)||(1926163-1926224)
chr1 (283-344)||(20925177-20925238)
chr1 (283-344)||(52634829-52634890)
chr1 (41-180)||(23967335-23967482)
chr1 (283-344)||(16376414-16376475)
chr1 (283-344)||(33796608-33796669)
chr1 (283-344)||(39244963-39245024)
chr1 (283-344)||(39248518-39248579)
chr1 (283-344)||(41389411-41389472)
chr1 (41-114)||(42911816-42911889)
chr1 (41-114)||(14238700-14238777)
chr1 (42-114)||(48519946-48520018)
chr1 (52-91)||(14238748-14238787)
chr1 (41-92)||(19675540-19675591)
chr1 (299-344)||(3705436-3705481)
chr1 (299-344)||(21172726-21172771)
chr1 (299-344)||(21312842-21312887)
chr1 (52-92)||(42911805-42911845)
chr1 (41-92)||(20241616-20241667)
chr1 (52-114)||(48519913-48519975)
chr1 (299-344)||(36819644-36819689)
chr1 (299-335)||(18394334-18394370)
[»] scaffold0141 (2 HSPs)
scaffold0141 (41-171)||(14698-14828)
scaffold0141 (283-344)||(15130-15191)
[»] scaffold1852 (1 HSPs)
scaffold1852 (41-184)||(102-246)
[»] scaffold0029 (5 HSPs)
scaffold0029 (50-184)||(79918-80053)
scaffold0029 (41-171)||(66110-66240)
scaffold0029 (44-171)||(62197-62324)
scaffold0029 (283-344)||(79608-79669)
scaffold0029 (283-312)||(62679-62708)
[»] scaffold0124 (1 HSPs)
scaffold0124 (41-177)||(25182-25318)
[»] scaffold0601 (2 HSPs)
scaffold0601 (56-177)||(8090-8211)
scaffold0601 (41-123)||(8042-8124)
[»] scaffold0142 (1 HSPs)
scaffold0142 (41-177)||(8176-8312)
[»] scaffold0484 (1 HSPs)
scaffold0484 (50-180)||(241-371)
[»] scaffold0293 (1 HSPs)
scaffold0293 (41-184)||(20790-20937)
[»] scaffold0165 (2 HSPs)
scaffold0165 (41-177)||(3115-3251)
scaffold0165 (41-177)||(7178-7314)
[»] scaffold0372 (2 HSPs)
scaffold0372 (41-171)||(5685-5816)
scaffold0372 (286-344)||(6032-6090)
[»] scaffold0349 (2 HSPs)
scaffold0349 (41-171)||(11811-11942)
scaffold0349 (283-342)||(11539-11598)
[»] scaffold0166 (2 HSPs)
scaffold0166 (85-184)||(10395-10494)
scaffold0166 (41-81)||(10384-10424)
[»] scaffold0157 (2 HSPs)
scaffold0157 (41-171)||(33272-33403)
scaffold0157 (283-344)||(33696-33757)
[»] scaffold0061 (2 HSPs)
scaffold0061 (41-171)||(67887-68018)
scaffold0061 (283-344)||(68190-68251)
[»] scaffold0525 (2 HSPs)
scaffold0525 (41-132)||(4455-4546)
scaffold0525 (283-344)||(4868-4929)
[»] scaffold0028 (1 HSPs)
scaffold0028 (41-171)||(59305-59436)
[»] scaffold0074 (1 HSPs)
scaffold0074 (102-184)||(51300-51382)
[»] scaffold0494 (2 HSPs)
scaffold0494 (41-114)||(12710-12783)
scaffold0494 (52-91)||(12754-12793)
[»] scaffold0205 (2 HSPs)
scaffold0205 (41-114)||(29259-29332)
scaffold0205 (52-92)||(29248-29288)
[»] scaffold0023 (2 HSPs)
scaffold0023 (41-114)||(18064-18137)
scaffold0023 (52-91)||(18108-18147)
[»] scaffold0278 (2 HSPs)
scaffold0278 (52-177)||(7141-7274)
scaffold0278 (41-122)||(7237-7315)
[»] scaffold0546 (2 HSPs)
scaffold0546 (41-114)||(10664-10737)
scaffold0546 (52-91)||(10654-10693)
[»] scaffold0292 (2 HSPs)
scaffold0292 (52-172)||(4329-4449)
scaffold0292 (41-114)||(4420-4493)
[»] scaffold0207 (6 HSPs)
scaffold0207 (41-114)||(15546-15619)
scaffold0207 (52-104)||(15689-15741)
scaffold0207 (52-114)||(15656-15718)
scaffold0207 (52-98)||(15590-15636)
scaffold0207 (52-104)||(15722-15774)
scaffold0207 (52-98)||(15623-15669)
[»] scaffold0203 (1 HSPs)
scaffold0203 (41-114)||(19275-19348)
[»] scaffold0032 (1 HSPs)
scaffold0032 (41-98)||(63455-63512)
[»] scaffold0019 (1 HSPs)
scaffold0019 (41-92)||(28796-28847)
[»] scaffold1662 (2 HSPs)
scaffold1662 (41-114)||(634-707)
scaffold1662 (52-92)||(678-718)
[»] scaffold0452 (1 HSPs)
scaffold0452 (41-104)||(13918-13981)
[»] scaffold0299 (1 HSPs)
scaffold0299 (271-308)||(6174-6211)
[»] scaffold0058 (1 HSPs)
scaffold0058 (41-114)||(833-906)
[»] scaffold0044 (2 HSPs)
scaffold0044 (299-339)||(18918-18958)
scaffold0044 (299-339)||(12634-12674)
[»] scaffold0301 (1 HSPs)
scaffold0301 (41-92)||(10704-10755)
[»] scaffold0040 (1 HSPs)
scaffold0040 (42-92)||(102311-102361)
[»] scaffold1873 (1 HSPs)
scaffold1873 (299-344)||(954-999)
[»] scaffold1220 (1 HSPs)
scaffold1220 (299-344)||(1492-1537)
[»] scaffold0111 (4 HSPs)
scaffold0111 (53-114)||(20027-20088)
scaffold0111 (41-81)||(7093-7133)
scaffold0111 (41-81)||(14212-14252)
scaffold0111 (52-92)||(20059-20099)
[»] scaffold0036 (1 HSPs)
scaffold0036 (299-344)||(66762-66807)
[»] scaffold0015 (1 HSPs)
scaffold0015 (299-344)||(195296-195341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (299-344)||(173019-173064)
[»] scaffold0009 (1 HSPs)
scaffold0009 (299-339)||(228705-228745)
[»] scaffold1633 (1 HSPs)
scaffold1633 (41-104)||(44-107)
[»] scaffold0034 (1 HSPs)
scaffold0034 (41-92)||(116617-116668)
[»] scaffold0550 (1 HSPs)
scaffold0550 (303-344)||(7176-7217)
[»] scaffold0228 (1 HSPs)
scaffold0228 (299-344)||(18968-19013)
[»] scaffold0120 (1 HSPs)
scaffold0120 (299-344)||(20347-20392)
[»] scaffold0003 (1 HSPs)
scaffold0003 (41-82)||(70808-70849)
[»] scaffold0184 (1 HSPs)
scaffold0184 (299-335)||(4572-4608)


Alignment Details
Target: scaffold0013 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 73905 - 74048
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  73905 gagtcaaagtcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 74004  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||    
T  74005 taaagaagtacctatgaagattatacgatgtttaagatgtgaat 74048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 20163235 - 20163378
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  20163235 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgggttgtcttctacctatgtgttgt 20163334  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  20163335 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 20163378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 20157781 - 20157924
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  20157781 gagtcaaactcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 20157880  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||| || ||||||||||| ||||||||||||||||||||||||    
T  20157881 taaataagtacctatgaagattatacgatgtttatgatgtgaat 20157924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 20160457 - 20160600
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| | |||||||    
T  20160457 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgaattgtcgagttgtcttctacccatgtgttgt 20160556  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  20160557 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 20160600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 15224562 - 15224419
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  15224562 gagtcaaggtcgctgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 15224463  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  15224462 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 15224419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 14954778 - 14954908
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||| | |||||||    
T  14954778 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctacccatgtgttgt 14954877  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  14954878 taaagaagtacctacgaagattatacgatgt 14954908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 10712375 - 10712244
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||| |||| | |||||||    
T  10712375 gagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttacccatgtgttgt 10712276  T
Q  141 taaagaaatacctatgaaggttatacgatgtt 172  Q
    ||||||| ||||||||||| ||||||||||||    
T  10712275 taaagaagtacctatgaagattatacgatgtt 10712244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 10926145 - 10926014
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||| |||| | |||||||    
T  10926145 gagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttacccatgtgttgt 10926046  T
Q  141 taaagaaatacctatgaaggttatacgatgtt 172  Q
    ||||||| ||||||||||| ||||||||||||    
T  10926045 taaagaagtacctatgaagattatacgatgtt 10926014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 631339 - 631475
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||  ||||||| ||||||| | |||||||    
T  631339 gagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattctacccatgtgttgt 631438  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  631439 taaagaagtacctatgaagattatacgatgttcatga 631475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 5757516 - 5757647
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  5757516 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 5757615  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  5757616 ttaaagaagtacctacgaagattatacgatgt 5757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 9556050 - 9555919
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  9556050 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 9555951  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  9555950 ttaaagaagtacctacgaagattatacgatgt 9555919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 12487205 - 12487074
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  12487205 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 12487106  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  12487105 ttaaagaagtacctacgaagattatacgatgt 12487074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 14758013 - 14758144
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  14758013 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 14758112  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  14758113 ttaaagaagtacctacgaagattatacgatgt 14758144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 33741900 - 33741769
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  33741900 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 33741801  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  33741800 ttaaagaagtacctacgaagattatacgatgt 33741769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 17048698 - 17048831
Alignment:
Q  44 tcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaa 143  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||| ||||||  ||||||| || |||| | ||||||||||    
T  17048698 tcaaagtcgttgttgatgaattatcatccacgagttgttaagttgttaacgaattatcatctatgagttgctgagttgtattatacccatgtgttgttaa 17048797  T
Q  144 agaaatacctatgaaggttatacgatgtttatga 177  Q
    |||| ||||||||||| |||||||||||| ||||    
T  17048798 agaagtacctatgaagattatacgatgttcatga 17048831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 4561911 - 4562042
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||  |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  4561911 gagtcaaggtcgttgttgatgaattatcatccatgagttgtcaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 4562010  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| || | |||||||||||    
T  4562011 ttaaagaagtacctacgaggattatacgatgt 4562042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 25689378 - 25689292
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  25689378 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 25689292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 9555626 - 9555565
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555626 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 9555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 12486781 - 12486720
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486781 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 12486720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 14758436 - 14758497
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14758436 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 14955201 - 14955262
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955201 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14955262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 25688999 - 25688938
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688999 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 25688938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 33741396 - 33741335
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33741396 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 33741335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 4562295 - 4562356
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4562295 ttattaagtgaatatcatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 4562356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 5757820 - 5757881
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5757820 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 5757881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 15223876 - 15223815
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15223876 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 15223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 37018431 - 37018300
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| |  |||||| ||||||||||||| | | |||||||    
T  37018431 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccataagttgttgagttgtcttctatccacgtgttgt 37018332  T
Q  141 taaagaaatacctatgaaggttatacgatgtt 172  Q
    | | ||| ||| ||||||| ||||| ||||||    
T  37018331 tcatgaagtacttatgaagattatatgatgtt 37018300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 17809794 - 17809707
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttct 127  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||    
T  17809794 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttct 17809707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 3484875 - 3484802
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||||||    
T  3484875 gagtcaaagtcgttgttgatgaattatcatccatgagctgttaagttgttgttgaattatcatccatgagttgt 3484802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 27533486 - 27533400
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    ||||| |||||||||||||| | ||||||||||||||  ||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  27533486 gttgtcgatgaattatcatccatgagttgtcgagttgcgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 27533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 13592540 - 13592613
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| |  |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  13592540 gagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 13592613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 14548550 - 14548478
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttg 113  Q
    |||||||| ||||||||||||| || |||||| ||||||||| |||||||||||| || ||||| | ||||||    
T  14548550 gagtcaaagtcgttgttgatgagttgtcatccttgagttgttaagttgttgatgagttgtcatccatgagttg 14548478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 15042328 - 15042379
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  15042328 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 15042379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 15112096 - 15112045
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  15112096 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 15112045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 25090492 - 25090441
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  25090492 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 25090441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 35812637 - 35812700
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| |  |||||||||||||||| |||||||||||| || |||||    
T  35812637 gagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatc 35812700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 16997365 - 16997311
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatga 95  Q
    |||||||| |||||||| |||| || |||||||||||||||| ||||||||||||    
T  16997365 gagtcaaagtcgttgttaatgagttgtcatccatgagttgttaagttgttgatga 16997311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 15353677 - 15353722
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  15353677 atgttatgttattgatgatgattgaatgatgtgattacttgataat 15353722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 36134286 - 36134331
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  36134286 atgttatgttattgatgatgattgaatgctgtgattacttgataat 36134331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 27533497 - 27533457
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  27533497 gagtcaaagtcgttgtcgatgaattatcatccatgagttgt 27533457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 3484831 - 3484792
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  3484831 gttgttgttgaattatcatccatgagttgttaagttgttg 3484792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 13592584 - 13592624
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  13592584 gttgttgatgagttgtcatccatgagttgttaagttgttga 13592624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 25689389 - 25689349
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  25689389 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 25689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 7e-59; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 15464622 - 15464479
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15464622 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctacccatgtgttgt 15464523  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  15464522 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 15464479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 14665173 - 14665030
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  14665173 gagtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 14665074  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  14665073 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 14665030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 14668329 - 14668186
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||    
T  14668329 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctacccatgtgttgt 14668230  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  14668229 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 14668186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 4589499 - 4589642
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| | |||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  4589499 gagtcaaagttgttgttgatgaattatcatctatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 4589598  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  4589599 taaagaagtacctacgaaggttatacgatgtttatgatgtgaat 4589642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 19775090 - 19774947
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  19775090 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 19774991  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  19774990 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 19774947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 12339223 - 12339081
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  12339223 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacc-atgtgttgt 12339125  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  12339124 taaagaagtacctatgaagattttacgatgtttatgatgtgaat 12339081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 8489773 - 8489913
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||   ||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  8489773 gagtcaaagtcgttgttgatgaattttcatccatgagttgttaagttg---atgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 8489869  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  8489870 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 8489913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 15964467 - 15964337
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15964467 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 15964368  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  15964367 taaagaagtacctacgaagattatacgatgt 15964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 15968391 - 15968261
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15968391 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 15968292  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  15968291 taaagaagtacctacgaagattatacgatgt 15968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 15972315 - 15972185
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15972315 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 15972216  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  15972215 taaagaagtacctacgaagattatacgatgt 15972185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 37440223 - 37440353
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  37440223 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 37440322  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| ||||||||||| |||||||||||    
T  37440323 taaagaagtacctatgaagattatacgatgt 37440353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 16750927 - 16751070
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||  |||||||||||||||| |||||||    
T  16750927 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcaatgaattatcatctatgagttgttaagttgtcttctacctatgtgttgt 16751026  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| |||||||||||| |||||||||||    
T  16751027 taaagaagtacctacgaagattatacgatgttcatgatgtgaat 16751070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 17317714 - 17317857
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||| ||||| ||| || |||||||||||||||| |||||||||||||||||||||||||  ||||||    
T  17317714 gagtcaaggtcgttgttgatgaattatcatccatgaattgttaagtcgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatatgttgt 17317813  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||| | |||  ||||||||||||||||||||||||    
T  17317814 taaagaagtaccaacgaatattatacgatgtttatgatgtgaat 17317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 4107985 - 4108116
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||||||||||| | ||||||    
T  4107985 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4108084  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  4108085 ttaaagaagtacctacgaagattatacgatgt 4108116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 4111837 - 4111968
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||||||||||| | ||||||    
T  4111837 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4111936  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  4111937 ttaaagaagtacctacgaagattatacgatgt 4111968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 7109219 - 7109088
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||||| ||||||    
T  7109219 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgtgttg 7109120  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  7109119 ttaaagaagtacctacgaagattatacgatgt 7109088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 7113154 - 7113023
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||||| ||||||    
T  7113154 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgtgttg 7113055  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  7113054 ttaaagaagtacctacgaagattatacgatgt 7113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 11069591 - 11069460
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  11069591 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 11069492  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  11069491 ttaaagaagtacctacgaagattatacgatgt 11069460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 14498848 - 14498717
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  14498848 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 14498749  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  14498748 ttaaagaagtacctacgaagattatacgatgt 14498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 16796022 - 16795895
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaat 149  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||  ||||||| ||||||  | |||||||||||||| |    
T  16796022 tcgttgttgatgaattatcatccatgagttgttaagttattaatgaattatcatctatgagttgctgagttgtattctactcatgtgttgttaaagaagt 16795923  T
Q  150 acctatgaaggttatacgatgtttatga 177  Q
    |||||||||| |||||||||||| ||||    
T  16795922 acctatgaagattatacgatgttcatga 16795895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22321187 - 22321056
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  22321187 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 22321088  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  22321087 ttaaagaagtacctacgaagattatacgatgt 22321056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22336242 - 22336111
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  22336242 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 22336143  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  22336142 ttaaagaagtacctacgaagattatacgatgt 22336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 27410230 - 27410361
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  27410230 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 27410329  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  27410330 ttaaagaagtacctacgaagattatacgatgt 27410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 28949245 - 28949114
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  28949245 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 28949146  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  28949145 ttaaagaagtacctacgaagattatacgatgt 28949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 12852908 - 12853032
Alignment:
Q  53 ttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacc 152  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||    |||||||||||||| | |||||||||||||| ||||    
T  12852908 ttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagtttcttagttgtcttctacccatgtgttgttaaagaagtacc 12853007  T
Q  153 tatgaaggttatacgatgtttatga 177  Q
    ||||||| |||||||||||| ||||    
T  12853008 tatgaagattatacgatgttcatga 12853032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 15616897 - 15616766
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||| | ||||||| | ||||||    
T  15616897 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacccatgtgttg 15616798  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  15616797 ttaaagaagtacctacgaagattatacgatgt 15616766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 55022388 - 55022257
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  55022388 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtattctacccatgtgttg 55022289  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| || ||||||||    
T  55022288 ttaaagaagtacctacgaagattgtacgatgt 55022257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 11166124 - 11166246
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttgttaaagaaa 148  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||||||||||     
T  11166124 tcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttgttaaagaag 11166223  T
Q  149 tacctatgaaggttatacgatgt 171  Q
    ||||||  ||| |||||||||||    
T  11166224 tacctacaaagattatacgatgt 11166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 5222845 - 5222761
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtctt 125  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  5222845 gagtcaaagtcgttgttgataaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagtagtctt 5222761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 4108249 - 4108310
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4108249 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 4108310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 4112101 - 4112162
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4112101 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 4112162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 7108795 - 7108734
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108795 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 7108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 7112730 - 7112669
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112730 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 7112669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 15616734 - 15616673
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15616734 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 15616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 15964035 - 15963974
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15964035 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 15963974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 15967959 - 15967898
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15967959 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 15967898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 15971883 - 15971822
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15971883 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 15971822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 22320763 - 22320702
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320763 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 22320702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 22335818 - 22335757
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335818 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 22335757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 28948941 - 28948880
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28948941 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 28948880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 30064946 - 30064885
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30064946 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 30064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 14159826 - 14159886
Alignment:
Q  284 tattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14159826 tattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14159886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 14498501 - 14498443
Alignment:
Q  286 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14498501 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14498443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 14670593 - 14670442
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatcta--------agagttgtcgagttgtcttctaccta 132  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||| || || ||||| |         ||||||| ||||||||||| ||| |    
T  14670593 gagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttgagttgttgagttgtcttcaaccca 14670494  T
Q  133 agtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
     |||||||||||||| ||||||||||| ||||| |||||||||||| |||||    
T  14670493 tgtgttgttaaagaagtacctatgaagattatatgatgtttatgatatgaat 14670442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 11166538 - 11166599
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11166538 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11166599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 16751652 - 16751713
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16751652 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 16751713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 19774512 - 19774451
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19774512 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 19774451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 27411088 - 27411149
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27411088 ttattaagtaaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 27411149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 55022084 - 55022023
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55022084 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 55022023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 14682115 - 14681964
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtc--------gagttgtcttctaccta 132  Q
    |||||||| |||||||||||||||| |||| ||||||||||| |||||||||  | || ||||| | |||||||         ||||||||||||||| |    
T  14682115 gagtcaaagtcgttgttgatgaattgtcatgcatgagttgttaagttgttgacaagttgtcatccatgagttgttaagttgttgagttgtcttctaccca 14682016  T
Q  133 agtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
     |||||||||||||| ||||||||||| ||||| |||||||||||| |||||    
T  14682015 tgtgttgttaaagaagtacctatgaagattatatgatgtttatgatatgaat 14681964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 11069247 - 11069186
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11069247 ttattaaatgaatattatattatgttattgatgatgatcgaatgttgtgattacttggtaat 11069186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 17318147 - 17318208
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  17318147 ttattaagtgaatattatgttatgttattgatgatgatcgaaagttgtgattacttgataat 17318208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 14067598 - 14067644
Alignment:
Q  298 tatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14067598 tatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 14441104 - 14440975
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatc-atctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaata 150  Q
    |||||||||||||| |||||||||||||||| ||||||||||   |  || ||| | ||||||| ||||||||||||| | | ||||||||||  || |     
T  14441104 gttgttgatgaattgtcatccatgagttgttaagttgttgatttgtcttctatccatgagttgttgagttgtcttctatccatgtgttgttaataaagtg 14441005  T
Q  151 cctatgaaggttatacgatgtttatgatgt 180  Q
    | ||||||| ||||||||||||||||||||    
T  14441004 cttatgaagattatacgatgtttatgatgt 14440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 13543727 - 13543677
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  13543727 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttg 13543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 2842666 - 2842739
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  2842666 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 2842739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 18700874 - 18700947
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  18700874 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 18700947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 31097889 - 31097934
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  31097889 atgttatgttattgatgatgattgaatgttgtgattacttggtaat 31097934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 46821969 - 46821920
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgtt 90  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  46821969 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 46821920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 10543019 - 10543082
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  10543019 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 10543082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 30065459 - 30065372
Alignment:
Q  85 gttgttgatgaattatcatctaagagtt-gtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    ||||| |||||||||||||| | ||||| ||||||| || ||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  30065459 gttgtcgatgaattatcatccatgagtttgtcgagtggtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 30065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 7793697 - 7793742
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  7793697 atgttatgttattgatgatgattgaatgttgtgattacttgataat 7793742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 12120178 - 12120219
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  12120178 gagtcaaagtcgttgttgatgaattatcatccatgagttgtt 12120219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 14067289 - 14067346
Alignment:
Q  73 atgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacc 130  Q
    |||||||||| |||||| |||||||||||||| | ||||||||||||||| |||||||    
T  14067289 atgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctacc 14067346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 13520978 - 13521030
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||||||||| |||||||||||||||| |||||||||||| || |||||    
T  13520978 gttgttgatgaattttcatccatgagttgttaagttgttgatgagttgtcatc 13521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 35353409 - 35353358
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  35353409 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 35353358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 15565371 - 15565309
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||||||||| |||||| |||||||||  |||||||||||||| ||||| | |||||||    
T  15565371 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatccacgagttgt 15565309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 327512 - 327557
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  327512 atgttatgttattgatgatgattgaatgctgtgattacttgttaat 327557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 1983181 - 1983226
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  1983181 atgttatgttattgatgatgattgaatgatgtgattacttgataat 1983226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 11301201 - 11301238
Alignment:
Q  271 gtgttgtttaagttattaagtgaatattatgttatgtt 308  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11301201 gtgttgtttaagttactaagtgaatattatgttatgtt 11301238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 11854059 - 11854022
Alignment:
Q  271 gtgttgtttaagttattaagtgaatattatgttatgtt 308  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11854059 gtgttgtttaagttactaagtgaatattatgttatgtt 11854022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 14441148 - 14441075
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||| ||||| || | ||||||||| |||| ||||||||||||||| ||||| | |||||||    
T  14441148 gagtcaaagtcgttgtcgatgagttgttatccatgagctgttaagttgttgatgaattgtcatccatgagttgt 14441075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 15464295 - 15464258
Alignment:
Q  271 gtgttgtttaagttattaagtgaatattatgttatgtt 308  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15464295 gtgttgtttaggttattaagtgaatattatgttatgtt 15464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 20461847 - 20461892
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  20461847 atgttatgttattgatgatgattgaatgctgtgattacttgataat 20461892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 38962296 - 38962337
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  38962296 gagtcaaagtcgttgttgatgaattatcattcatgagttgtt 38962337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 5220580 - 5220536
Alignment:
Q  127 tacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||    
T  5220580 tacctaagtgttgttaaagaagtacctatgaagattatatgatgt 5220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 15482433 - 15482393
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttg 339  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  15482433 atgttatgttattgatgatgattgaatgctgtgattacttg 15482393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 10562527 - 10562476
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || ||||||||||||| || |||||||||    
T  10562527 gagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgttga 10562476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 42353684 - 42353731
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttg 88  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||    
T  42353684 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttg 42353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 19884816 - 19884862
Alignment:
Q  45 caaattcgttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||||    
T  19884816 caaagtcgttgttgatgagttgtcatccatgagttgttaagttgttg 19884862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 3403327 - 3403372
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  3403327 atgttttgttattgatgatgattgaatgatgtgattacttgataat 3403372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 7574766 - 7574721
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||| | |||||||||||| ||||    
T  7574766 atgttatgttattgatgatgattgaaagctgtgattacttgataat 7574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 43890184 - 43890257
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||  ||||| ||||||||| || || ||||| | |||||||    
T  43890184 gagtcaaagtcgttgttgatgagttgtcatccatggattgttaagttgttgacgagttgtcatccatgagttgt 43890257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 5214771 - 5214723
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgt 89  Q
    |||||||| ||||||||||||| || ||||||||||||| || ||||||    
T  5214771 gagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgt 5214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 11557756 - 11557796
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttg 339  Q
    |||||||||||||||||||||| |||||  |||||||||||    
T  11557756 atgttatgttattgatgatgattgaatgaagtgattacttg 11557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 15565338 - 15565298
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||||||||| ||||||| |||||||| |||||||||    
T  15565338 gttgttgatgaattgtcatccacgagttgttaagttgttga 15565298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 44269448 - 44269408
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  44269448 gagtcaaagtcgttgttgatgagttgtcatccatgagttgt 44269408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 2832784 - 2832926
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgtt 141  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2832784 agtcaaagtcgttgttgatgaattatcatccatgatttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgtt 2832883  T
Q  142 aaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  2832884 aaagaagtacctatgaagattatacgatgtttatgatgtgaat 2832926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 1859410 - 1859553
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  1859410 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctacgagttgtcgagttgttttctacccatgtgttgt 1859509  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  1859510 taaagaagtacctatgaaggttatacgatgtttatgatgtgaat 1859553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 2530740 - 2530883
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  2530740 gagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatctaagagttgtcgagttgtcttctacccatgtgttgt 2530839  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||    
T  2530840 taaagaagtacccatgaagattatacgatgtttatgatgtgaat 2530883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 13919081 - 13919224
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  13919081 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 13919180  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  13919181 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 13919224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 12705245 - 12705388
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  12705245 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 12705344  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  12705345 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 12705388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 15083691 - 15083548
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||| | |||||||    
T  15083691 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaaatatcatctatgagttgtcgagttgtcttctacccatgtgttgt 15083592  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  15083591 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 15083548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 18425180 - 18425037
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  18425180 gagtcaaggtcgttgttgatgagttatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 18425081  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  18425080 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 18425037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 26291892 - 26291749
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  26291892 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacctatgtgttgt 26291793  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  26291792 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 26291749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 39721761 - 39721618
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||| | |||||||    
T  39721761 gagtcaaggtcgttgttaatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtcttctacccatgtgttgt 39721662  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  39721661 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 39721618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 20487316 - 20487186
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  20487316 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgt 20487217  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| ||||||||||| ||||| |||||    
T  20487216 taaagaagtacctatgaagattatatgatgt 20487186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 25927827 - 25927972
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgtt--gatgaattatcatctaagagttgtcgagttgtcttctacctaagtgtt 138  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||| ||||||||||||||| | |||||    
T  25927827 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgtt 25927926  T
Q  139 gttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||||| ||||||||||| ||||| ||||||||||| ||||||    
T  25927927 gttaaagaagtacctatgaagattatatgatgtttatgacgtgaat 25927972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 45170617 - 45170747
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  45170617 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgttttctacccatgtgttgt 45170716  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  45170717 taaagaagtacctacgaagattatacgatgt 45170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 18301821 - 18301685
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||  ||||||| ||||||| | |||||||    
T  18301821 gagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattctacccatgtgttgt 18301722  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| ||| |||||||| ||||    
T  18301721 taaagaagtacctatgaagattacacgatgttcatga 18301685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 32629 - 32498
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||||| ||||||    
T  32629 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgtgttg 32530  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  32529 ttaaagaagtacctacgaagattatacgatgt 32498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 16113761 - 16113630
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||||| ||||||    
T  16113761 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgtgttg 16113662  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  16113661 ttaaagaagtacctacgaagattatacgatgt 16113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 16116914 - 16116783
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||||| ||||||    
T  16116914 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgtgttg 16116815  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  16116814 ttaaagaagtacctacgaagattatacgatgt 16116783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 7519669 - 7519769
Alignment:
Q  84 agttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaa 183  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7519669 agttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatgatgtgaa 7519768  T
Q  184 t 184  Q
    |    
T  7519769 t 7519769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 71353 - 71484
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  71353 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 71452  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  71453 ttaaagaagtacctacgaagattatacgatgt 71484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 75462 - 75593
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  75462 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 75561  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  75562 ttaaagaagtacctacgaagattatacgatgt 75593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 16907797 - 16907928
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  16907797 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 16907896  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  16907897 ttaaagaagtacctacgaagattatacgatgt 16907928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 18282886 - 18282755
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  18282886 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 18282787  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  18282786 ttaaagaagtacctacgaagattatacgatgt 18282755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 18278914 - 18278792
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttgttaaagaaa 148  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||||||||||     
T  18278914 tcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttgttaaagaag 18278815  T
Q  149 tacctatgaaggttatacgatgt 171  Q
    |||||| |||| |||||||||||    
T  18278814 tacctacgaagattatacgatgt 18278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 12718188 - 12718057
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | || |||    
T  12718188 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtattg 12718089  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  12718088 ttaaagaagtacctacgaagattatacgatgt 12718057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 12723099 - 12722968
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | || |||    
T  12723099 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtattg 12723000  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  12722999 ttaaagaagtacctacgaagattatacgatgt 12722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 32205 - 32144
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32205 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 32144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 71817 - 71878
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  71817 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 71878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 75926 - 75987
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  75926 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 75987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 12705677 - 12705738
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12705677 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 12705738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 45171041 - 45171102
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45171041 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 45171102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 12717841 - 12717783
Alignment:
Q  286 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717841 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 12717783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 12722752 - 12722694
Alignment:
Q  286 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722752 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 12722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 12714020 - 12713959
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12714020 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattatttggtaat 12713959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 18278539 - 18278478
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18278539 ttattaagtgaatattatgttatgttattgatgatgatcgaattttgtgattacttggtaat 18278478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 18282502 - 18282441
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18282502 ttattaagtgaatattatgttatgttattgatgatgatcgaattttgtgattacttggtaat 18282441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 18424565 - 18424504
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18424565 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 18424504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 24274870 - 24274797
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  24274870 gagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagttgt 24274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 15605878 - 15605934
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaat 97  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  15605878 gagtcaaattcgttgttgatgaattatcatccatgagtttttgagttgttgatgaat 15605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 16585226 - 16585087
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaag--------agttgtcgagttgtcttctaccta 132  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |        |||||| ||||||||||||||| |    
T  16585226 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgttgagttgtcttctaccca 16585127  T
Q  133 agtgttgttaaagaaatacctatgaaggttatacgatgtt 172  Q
     |||||||||| ||| | | ||||||| ||||| ||||||    
T  16585126 tgtgttgttaatgaagtgcttatgaagattatatgatgtt 16585087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 14257995 - 14257922
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||||| ||||| ||||| | |||||||    
T  14257995 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgaggaattgtcatccatgagttgt 14257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 16579327 - 16579264
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  16579327 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 16579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 16586335 - 16586398
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  16586335 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 16586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 20585274 - 20585201
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| || |||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  20585274 gagtcaaagtcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 20585201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 12714413 - 12714353
Alignment:
Q  111 ttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||| ||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  12714413 ttgtcgagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 12714353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 14257951 - 14257822
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaag--------agttgtcgagttgtcttctacctaagtgttgttaa 143  Q
    |||||||| ||||| |||||||||||||||| ||||||||| ||||| ||||| | |        |||||| ||||||||||||||| | ||||||||||    
T  14257951 gttgttgaggaattgtcatccatgagttgttaagttgttgacgaattgtcatccatgagttgttaagttgttgagttgtcttctacccatgtgttgttaa 14257852  T
Q  144 agaaatacctatgaaggttatacgatgttt 173  Q
     ||| | | ||||||| ||||| |||||||    
T  14257851 tgaagtgcttatgaagattatatgatgttt 14257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 14933118 - 14933158
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  14933118 gttgttgatgaattatcatccatgagttgttaagttgttga 14933158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 15356553 - 15356593
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  15356553 gttgttgatgaattatcatccatgagttgttaagttgttga 15356593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 15360667 - 15360707
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  15360667 gttgttgatgaattatcatccatgagttgttaagttgttga 15360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 16461505 - 16461560
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaa 96  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||| |||||    
T  16461505 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttaatgaa 16461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 24274826 - 24274787
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  24274826 gttgttgatgaattatcatccatgagttgttaagttgttg 24274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 1859749 - 1859786
Alignment:
Q  271 gtgttgtttaagttattaagtgaatattatgttatgtt 308  Q
    |||||||||| |||||||||||||||||||||||||||    
T  1859749 gtgttgtttaggttattaagtgaatattatgttatgtt 1859786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 12317895 - 12317850
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  12317895 atgttatgttattgatgatgattgaatgctgtgattacttgataat 12317850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 15605609 - 15605654
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  15605609 atgttatgttattgatgatgattgaatgctgtgattacttgataat 15605654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 32300810 - 32300747
Alignment:
Q  109 agttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtt 172  Q
    |||||| ||||||||||||||| | |||||||||| ||| | | ||||||| ||||||||||||    
T  32300810 agttgttgagttgtcttctacccatgtgttgttaatgaagtgcttatgaagattatacgatgtt 32300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 32300853 - 32300802
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||| ||| |||||||||    
T  32300853 gagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgttga 32300802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 14152340 - 14152385
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  14152340 atgttatgttattaatgatgattgaatgctgtgattacttgataat 14152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 15082329 - 15082369
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  15082329 gagtcaaagtcgttgt-gatgaattatcatccatgagttgtt 15082369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 9446531 - 9446575
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  9446531 tgttatgttattgatgatgattgaatgatgtgaatacttgttaat 9446575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 20585230 - 20585190
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  20585230 gttgttgatgagttgtcatccatgagttgttaagttgttga 20585190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 21828625 - 21828768
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  21828625 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 21828724  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  21828725 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 21828768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 18863256 - 18863399
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  18863256 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 18863355  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||    
T  18863356 taaagaagtacctatgaagattatacgatgtttacgatgtgaat 18863399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 21386853 - 21386710
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  ||||||||||||||||||||||| | |||||||    
T  21386853 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctttgagttgtcgagttgtcttctacccatgtgttgt 21386754  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||| ||| ||| ||||||||||||||||||||||||    
T  21386753 taaagaagtacttataaagattatacgatgtttatgatgtgaat 21386710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 14398434 - 14398575
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||| ||||||| | |||||||    
T  14398434 gagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatct--gagttgtcgagttgttttctacccatgtgttgt 14398531  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||    
T  14398532 taaagaagtacatatgaagattatacgatgtttatgatgtgaat 14398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 21410445 - 21410302
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| | |||||||    
T  21410445 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctacccatgtgttgt 21410346  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||    
T  21410345 taaagaagtacctatgacgattatatgatgtttatgatgtgaat 21410302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 21804937 - 21804794
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| | |||||||    
T  21804937 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctacccatgtgttgt 21804838  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||    
T  21804837 taaagaagtacctatgacgattatatgatgtttatgatgtgaat 21804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 23913791 - 23913648
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  | |||||||||||| | |||||||    
T  23913791 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttaatttgtcttctacccatgtgttgt 23913692  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||| | ||||||||||||||||||    
T  23913691 taaagaagtacctatgaagattacatgatgtttatgatgtgaat 23913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 30940688 - 30940818
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  30940688 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 30940787  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  30940788 taaagaagtacctacgaagattatacgatgt 30940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 21973167 - 21973298
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  21973167 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 21973266  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    || ||||| ||||||||||| |||||||||||    
T  21973267 ttgaagaagtacctatgaagattatacgatgt 21973298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 21977258 - 21977389
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  21977258 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 21977357  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    || ||||| ||||||||||| |||||||||||    
T  21977358 ttgaagaagtacctatgaagattatacgatgt 21977389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 44385233 - 44385372
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgtt 141  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| | ||||| ||||||||||||||| | ||||| ||    
T  44385233 agtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttaatgaattatcatctatgtgttgttgagttgtcttctacccatgtgttatt 44385332  T
Q  142 aaa-gaaatacctatgaaggttatacgatgtttatgatgt 180  Q
    ||| | | ||||||||||| |||||||||||| |||||||    
T  44385333 aaagggagtacctatgaagattatacgatgttcatgatgt 44385372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22111451 - 22111320
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||| | ||||||| | ||||||    
T  22111451 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacccatgtgttg 22111352  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  22111351 ttaaagaagtacctacgaagattatacgatgt 22111320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 43251331 - 43251200
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  43251331 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 43251232  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| || ||||||||    
T  43251231 ttaaagaagtacctacgaagattgtacgatgt 43251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 18863645 - 18863706
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18863645 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 18863706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 21828986 - 21829047
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21828986 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 21829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 21977642 - 21977703
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21977642 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 21977703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 30941120 - 30941181
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30941120 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 30941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 16413765 - 16413882
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||| | |||||||  |||||||||||| | | |||| ||    
T  16413765 gagtcaaagtcgttgttgatgaattatcatacatgagttattaagttgttgatgaattatcatccatgagttgttaagttgtcttctatccatgtgtagt 16413864  T
Q  141 taaagaaatacctatgaa 158  Q
    ||| ||| ||| ||||||    
T  16413865 taatgaagtacttatgaa 16413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 21973551 - 21973612
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21973551 ttattaagtgaatattatgttatgttattgataatgatcgaatgttgtgattacttggtaat 21973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 22111147 - 22111086
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111147 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 22111086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 43250907 - 43250846
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43250907 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 43250846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 32121524 - 32121451
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  32121524 gagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagttgt 32121451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 5760237 - 5760109
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatc-atctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaata 150  Q
    |||||||||||||| |||||||||||||||| |||||||||   ||  || ||| | |||||||  |||||||||||| | | |||||||||| ||| |     
T  5760237 gttgttgatgaattgtcatccatgagttgttaagttgttgagttatcttctatccatgagttgt-tagttgtcttctatccatgtgttgttaatgaagtg 5760139  T
Q  151 cctatgaaggttatacgatgtttatgatgt 180  Q
    | ||||||| ||||||||||||||||||||    
T  5760138 cttatgaagattatacgatgtttatgatgt 5760109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 32121480 - 32121441
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  32121480 gttgttgatgaattatcatccatgagttgttaagttgttg 32121441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 42819123 - 42819185
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    ||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  42819123 gttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 42819185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 20856811 - 20856856
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  20856811 atgttatgttattgatgatgattgaatgatgtgattacttgataat 20856856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 18833161 - 18833089
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    ||||||| | ||||||||||| || |||||||||||||||| ||||||||| || || ||||| | |||||||    
T  18833161 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgt 18833089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 37515238 - 37515198
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  37515238 gttgttgatgaattgtcattcatgagttgttaagttgttga 37515198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 42819156 - 42819196
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  42819156 gttgttgatgagttgtcatccatgagttgttaagttgttga 42819196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 22074572 - 22074715
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||    
T  22074572 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctacccatgtgttgt 22074671  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  22074672 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 22074715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 23414425 - 23414282
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  23414425 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 23414326  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  23414325 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 23414282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 1644030 - 1643887
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  1644030 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacctatgtgttgt 1643931  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  1643930 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 1643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 31478570 - 31478713
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  31478570 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 31478669  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||| || |||| ||||||||||||||||||||||||    
T  31478670 taaagaagtacatacgaagattatacgatgtttatgatgtgaat 31478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 2076992 - 2076849
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  2076992 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgt 2076893  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||  | ||||||||||||||||||    
T  2076892 taaagaagtacctatgaagattgcatgatgtttatgatgtgaat 2076849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 16623874 - 16623731
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  16623874 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgtgttgt 16623775  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||| || |||||| |||  ||||||||||||||||||||||||    
T  16623774 taaaaaagtacctacgaaaattatacgatgtttatgatgtgaat 16623731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 11566382 - 11566251
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  11566382 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 11566283  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  11566282 ttaaagaagtacctacgaagattatacgatgt 11566251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 12619428 - 12619559
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  12619428 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 12619527  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  12619528 ttaaagaagtacctacgaagattatacgatgt 12619559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22862466 - 22862335
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  22862466 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 22862367  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  22862366 ttaaagaagtacctacgaagattatacgatgt 22862335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 23394588 - 23394457
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  23394588 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 23394489  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  23394488 ttaaagaagtacctacgaagattatacgatgt 23394457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 14471733 - 14471603
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||| ||||||| |||||||||| |||||| |||||||||||||| | |||| |||||||||| ||||||| | |||||||    
T  14471733 gagtcaaagtcgttgttgatgaactatcatctatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctacccatgtgttgt 14471634  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  14471633 taaagaagtacctacgaagattatacgatgt 14471603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 8243353 - 8243222
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  8243353 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 8243254  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| || ||||||||    
T  8243253 ttaaagaagtacctacgaagattttacgatgt 8243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 23989440 - 23989309
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  23989440 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 23989341  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||  |||| |||||||||||    
T  23989340 ttaaagaagtacctgcgaagattatacgatgt 23989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 16759746 - 16759626
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagtt-gtcgagttgtcttctacctaagtgttgttaaagaaata 150  Q
    ||||| ||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||| |||||||||| ||||||| | |||||||||||||| ||    
T  16759746 gttgtcgatgaattatcatccattagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttgttaaagaagta 16759647  T
Q  151 cctatgaaggttatacgatgt 171  Q
    |||| |||| |||||||||||    
T  16759646 cctacgaagattatacgatgt 16759626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 27556159 - 27556064
Alignment:
Q  78 ttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgttt 173  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||    
T  27556159 ttgttaagttgatgatgaattatcatctatgagttgtcgagttgttttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttt 27556064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 22948592 - 22948506
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  22948592 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22948506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 22952548 - 22952462
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  22952548 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 23871036 - 23870950
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  23871036 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 23874992 - 23874906
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  23874992 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23874906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 11565958 - 11565897
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565958 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 12619852 - 12619913
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12619852 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 12619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 14471389 - 14471328
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14471389 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 14471328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 19869725 - 19869664
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19869725 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 19869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 22948213 - 22948152
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22948213 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 22948152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 22952169 - 22952108
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22952169 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 22952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 23394164 - 23394103
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23394164 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 23394103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 23414072 - 23414011
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23414072 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 23414011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 23870657 - 23870596
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23870657 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 23870596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 23874613 - 23874552
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23874613 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 23874552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 23989056 - 23988995
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23989056 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 23988995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 31479227 - 31479288
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31479227 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 31479288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 16623118 - 16623057
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16623118 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 16623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 16759333 - 16759272
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16759333 ttattaagtaaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 16759272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 23538296 - 23538215
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtc 123  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||  |||||||    
T  23538296 agtcaaattcgttgttgatgaattatcatccaagagttgttaagttgttgatgaattatcattcaagagttgttaagttgtc 23538215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 19870110 - 19869978
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttct-acctaagtgtt 138  Q
    |||||||  |||||||||||||||||||||||| |||||||| |||||| |||||||||||||| | ||| |||||||||| | || | ||| | |||||    
T  19870110 gagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttataacccatgtgtt 19870011  T
Q  139 gttaaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||||| |||||| |||| |||||||||||    
T  19870010 gttaaagaagtacctacgaagattatacgatgt 19869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 8242970 - 8242909
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8242970 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttgctaat 8242909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 19656762 - 19656891
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga--tgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaat 149  Q
    |||||||||||||| |||||||||||||| | |||||||||  ||  || | ||| | ||||||| ||||||||||||| ||| |||||||||| ||| |    
T  19656762 gttgttgatgaattgtcatccatgagttgctaagttgttgagttgtcttct-atccatgagttgttgagttgtcttctatctatgtgttgttaatgaagt 19656860  T
Q  150 acctatgaaggttatacgatgtttatgatgt 180  Q
     | ||||||| ||||||||||||||||||||    
T  19656861 gcttatgaagattatacgatgtttatgatgt 19656891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 15705942 - 15706004
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  15705942 agtcaaattcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 15706004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 34963118 - 34963068
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  34963118 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttg 34963068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 17742922 - 17742865
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaatt 98  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||    
T  17742922 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaatt 17742865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 22805502 - 22805439
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  22805502 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 22805439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 23992172 - 23992125
Alignment:
Q  44 tcaaattcgttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  23992172 tcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttg 23992125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 16759781 - 16759727
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||    
T  16759781 tcgttgttgatgaattatcatccattagctgttaagttgtcgatgaattatcatc 16759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 17105402 - 17105348
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatga 95  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||    
T  17105402 gagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgtcgatga 17105348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 18918006 - 18918092
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||| ||||||||||||||| | | ||  ||||||||| ||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  18918006 gttggtgatgaattatcatccatgggtgatcgagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 18918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 19774065 - 19774204
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaag--------agttgtcgagttgtcttctaccta 132  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||||| || || ||||| | |        |||||| ||||||||||||||| |    
T  19774065 gagtcaaagtcgttgttgatgacttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttaagttgttgagttgtcttctaccca 19774164  T
Q  133 agtgttgttaaagaaatacctatgaaggttatacgatgtt 172  Q
     |||||||||| ||| | | ||||||| ||||| ||||||    
T  19774165 tgtgttgttaatgaagtgcttatgaagattatatgatgtt 19774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 27126611 - 27126665
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatga 95  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  27126611 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 27126665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 19656626 - 19656699
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||| ||||| || |||||||||||||||| ||||| ||||||||| ||||| | |||||||    
T  19656626 gagtcaaagtcgttgtcgatgagttgtcatccatgagttgttaagttgatgatgaattctcatccatgagttgt 19656699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 15705985 - 15706044
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagt 111  Q
    ||||||||||| || |||||||||||| ||| |||||||||||| || ||||||| ||||    
T  15705985 gttgttgatgagttgtcatccatgagtggttaagttgttgatgagttgtcatctatgagt 15706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 20182440 - 20182389
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcat 103  Q
    |||||||||||||| ||||||| |||||||| |||||| |||||||| ||||    
T  20182440 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcat 20182389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 20182453 - 20182402
Alignment:
Q  72 catgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtc 123  Q
    ||||||||||| ||||||||||||||| ||||| | ||||||| ||||||||    
T  20182453 catgagttgttaagttgttgatgaattgtcatccacgagttgttgagttgtc 20182402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 22153538 - 22153589
Alignment:
Q  72 catgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtc 123  Q
    ||||||||||| ||||||||||||||| ||||| | ||||||| ||||||||    
T  22153538 catgagttgttaagttgttgatgaattgtcatccacgagttgttgagttgtc 22153589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 22153551 - 22153602
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcat 103  Q
    |||||||||||||| ||||||| |||||||| |||||| |||||||| ||||    
T  22153551 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcat 22153602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 17742878 - 17742832
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaatt 98  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||    
T  17742878 gttgttgatgaattgacatccatgagttgtaaagttgttgatgaatt 17742832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 17803956 - 17803911
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||    
T  17803956 atgttatgttattgatgatgattgaatactgtgattacttgttaat 17803911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 25767477 - 25767522
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  25767477 atgttatgttattggtgatgattgaatgctgtgattacttgataat 25767522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 27416512 - 27416553
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  27416512 gagtcgaagtcgttgttgatgaattatcatctatgagttgtt 27416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 27567981 - 27568026
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  27567981 atgttatgttattgatgatgattgaatgatgtgaatacttgttaat 27568026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 7825481 - 7825433
Alignment:
Q  44 tcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||| ||||||||||||| || ||||||| |||||||| |||||||||    
T  7825481 tcaaagtcgttgttgatgagttgtcatccacgagttgttaagttgttga 7825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 17742845 - 17742805
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  17742845 gttgttgatgaattgtcctccatgagttgttaagttgttga 17742805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 19656695 - 19656735
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  19656695 gttgttgataaattgtcatccatgagttgttaagttgttga 19656735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 19656746 - 19656790
Alignment:
Q  69 atccatgagttgttcagttgttgatgaattatcatctaagagttg 113  Q
    |||||||||||||| ||||||||||||||| ||||| | ||||||    
T  19656746 atccatgagttgttaagttgttgatgaattgtcatccatgagttg 19656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 22948603 - 22948563
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  22948603 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 22948563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 22952559 - 22952519
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  22952559 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 22952519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 23871047 - 23871007
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  23871047 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 23871007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 23875003 - 23874963
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  23875003 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 23874963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 6477 - 6620
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  6477 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgt 6576  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  6577 taaagaagtacctatgaagattatatgatgtttatgatgtgaat 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 11490 - 11347
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||    
T  11490 gagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctacccatgtcttgt 11391  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  11390 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 108; Significance: 4e-54; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 36575 - 36718
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  36575 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 36674  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  36675 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 36718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 1064 - 1137
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||    
T  1064 gagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagttgt 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 1108 - 1147
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  1108 gttgttgatgaattaccatccatgagttgttaagttgttg 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 11230641 - 11230498
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  11230641 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 11230542  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  11230541 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 11230498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 18355737 - 18355594
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  18355737 gagtcgaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 18355638  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  18355637 taaagaagtacctatgaagattatacgatatttatgatgtgaat 18355594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 11224829 - 11224686
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  11224829 gagtcaaggtcgttgttgatgaattatcatccatgatttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 11224730  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  11224729 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 11224686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 11220243 - 11220100
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||| | |||||||    
T  11220243 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctacccatgtgttgt 11220144  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| || |||||||| ||||||||||||||||||||||||    
T  11220143 taaagaagtagctatgaagattatacgatgtttatgatgtgaat 11220100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 11228652 - 11228509
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||| | |||||||    
T  11228652 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctacccatgtgttgt 11228553  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  11228552 taaagaagtacctaggaagattatacgatgtttatgatgtgaat 11228509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 15237436 - 15237563
Alignment:
Q  57 tgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatg 156  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||| |    
T  15237436 tgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgtgttgttaaagaagtacctacg 15237535  T
Q  157 aaggttatacgatgtttatgatgtgaat 184  Q
    ||| ||||||||||||||||||||||||    
T  15237536 aagattatacgatgtttatgatgtgaat 15237563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 10752710 - 10752569
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||  ||||||    
T  10752710 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatct--gagttgtcgagttgtcttctacctatatgttgt 10752613  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||| || |||| ||||||||||||||||||||||||    
T  10752612 taaagaagtacatacgaagattatacgatgtttatgatgtgaat 10752569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 40724203 - 40724332
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgtt 141  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| ||||||| | ||||||||    
T  40724203 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctacccatgtgttgtt 40724302  T
Q  142 aaagaaatacctatgaaggttatacgatgt 171  Q
    |||||| |||||| |||| |||||||||||    
T  40724303 aaagaagtacctacgaagattatacgatgt 40724332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 11226662 - 11226546
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  11226662 gagtcaagatcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 11226563  T
Q  141 taaagaaatacctatga 157  Q
    ||||||| || ||||||    
T  11226562 taaagaagtagctatga 11226546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 20295367 - 20295235
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  20295367 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 20295268  T
Q  140 ttaaagaaatacctatgaaggttatacgatgtt 172  Q
    |||||||| |||||| |||| ||||||||||||    
T  20295267 ttaaagaagtacctacgaagattatacgatgtt 20295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 24767898 - 24767997
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  24767898 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatgatgtgaat 24767997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 20911531 - 20911629
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaa 183  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  20911531 gttgttgatgaattatcatctattagttgacgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatgatgtgaa 20911629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 22108009 - 22108101
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatga 177  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||| ||||||||||| |||||||||||| ||||    
T  22108009 gttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatga 22108101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 19473315 - 19473401
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  19473315 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 19473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 18355370 - 18355309
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355370 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 18355309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 19473694 - 19473755
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19473694 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 19473755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 20294997 - 20294936
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294997 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 20294936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 40724546 - 40724607
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40724546 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 40724607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 10752131 - 10752070
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10752131 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttgataat 10752070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 11220045 - 11220001
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11220045 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11220001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 11224631 - 11224587
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11224631 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 11228454 - 11228410
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11228454 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11228410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 11230443 - 11230399
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11230443 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 11230399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 22107998 - 22108046
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgt 89  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  22107998 gagtcaaagtcgttgttgatgaattatcatctatgagttgttgagttgt 22108046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 17410239 - 17410194
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||    
T  17410239 atgttatgttattggtgatgattgaatgttgtgattacttgataat 17410194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 24221623 - 24221578
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  24221623 atgttatgttattgatgatgattgaatgatgtgattacttgataat 24221578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 312
Target Start/End: Original strand, 20911880 - 20911909
Alignment:
Q  283 ttattaagtgaatattatgttatgttattg 312  Q
    ||||||||||||||||||||||||||||||    
T  20911880 ttattaagtgaatattatgttatgttattg 20911909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 19473304 - 19473344
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  19473304 gagtcaaggtcgttgttgatgaattatcatctatgagttgt 19473344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 24767887 - 24767927
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||||||||||||||||||  ||||||||    
T  24767887 gagtcaaagtcgttgttgatgaattatcatctgtgagttgt 24767927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 1282908 - 1282765
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||| | |||||||    
T  1282908 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctacccatgtgttgt 1282809  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  1282808 taaagaagtacctatgaagattatacgatgtttatgatgtgaat 1282765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 31344657 - 31344516
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  31344657 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt-gatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 31344559  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaa 183  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  31344558 taaagaagtacctatgaagattatacgatgtttatgatgtgaa 31344516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 9784530 - 9784387
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||| | |||||||    
T  9784530 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttttcttctacccatgtgttgt 9784431  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  9784430 taaagaagtacctatgaagtttatatgatgtttatgatgtgaat 9784387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 41531591 - 41531721
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  41531591 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 41531690  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  41531691 taaagaagtacctacgaagattatacgatgt 41531721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 30345602 - 30345732
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  30345602 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 30345701  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  30345702 taaagaagtacctacgaagattatacgatgt 30345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 24629065 - 24629196
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  24629065 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 24629164  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  24629165 ttaaagaagtacctacgaagattatacgatgt 24629196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 27380018 - 27380149
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  27380018 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 27380117  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  27380118 ttaaagaagtacctacgaagattatacgatgt 27380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 27384064 - 27384195
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  27384064 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 27384163  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  27384164 ttaaagaagtacctacgaagattatacgatgt 27384195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 27601312 - 27601181
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  27601312 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 27601213  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  27601212 ttaaagaagtacctacgaagattatacgatgt 27601181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 10102239 - 10102370
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | |||| |    
T  10102239 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgtcg 10102338  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  10102339 ttaaagaagtacctacgaagattatacgatgt 10102370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 12902102 - 12902193
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctaccta 132  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  12902102 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccta 12902193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 24648875 - 24648744
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  24648875 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 24648776  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| || ||||||||    
T  24648775 ttaaagaagtacctacgaagattgtacgatgt 24648744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 10102818 - 10102879
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10102818 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 10102879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 24629489 - 24629550
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24629489 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 24629550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 24648451 - 24648390
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24648451 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 24648390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 27380362 - 27380423
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380362 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 27380423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 27384408 - 27384469
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27384408 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 27384469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 30346025 - 30346086
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346025 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 30346086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 41531983 - 41532044
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41531983 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 41532044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 1282547 - 1282486
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1282547 ttattaagtgaatattatgttatgttattgatgatgatcaaatgttgtgattacttggtaat 1282486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 27600928 - 27600867
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600928 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 27600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 32215401 - 32215474
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  32215401 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccatgagttgt 32215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 17306326 - 17306253
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  17306326 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 17306253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 36839042 - 36838989
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatga 95  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  36839042 agtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 36838989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 38967126 - 38967085
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38967126 gagtcaaagtcgttgttgatgaattatcatccatgagttgtt 38967085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 24515025 - 24514974
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  24515025 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 24514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 28653715 - 28653766
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  28653715 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 28653766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 32215445 - 32215484
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  32215445 gttgttgatgaattatcatccatgagttgttaagttgttg 32215484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 19691982 - 19692027
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  19691982 atgttatgttattgatgatgattgaatgctgtgattacttgttaat 19692027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 24174546 - 24174501
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  24174546 atgttatgttattgatgatgattgaatgatgtgattacttgataat 24174501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 24367488 - 24367447
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  24367488 gagtcaaagtcgttgttgatgaattatcattcatgagttgtt 24367447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 24735161 - 24735117
Alignment:
Q  300 tgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||    
T  24735161 tgttatgttattgatgatgattgaatgatgtgattacttgataat 24735117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 24655708 - 24655753
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  24655708 atgttttgttattgatgatgattgaatgatgtgattacttgataat 24655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 208200 - 208342
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgtt 141  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||    
T  208200 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgacttgtcttctacccatgtgttgtt 208299  T
Q  142 aaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  208300 aaagaagtacctatgaagattatacgatatttatgatgtgaat 208342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 9372 - 9228
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||    
T  9372 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccaagaattgtcgagctgtcttatacctaagtgttgt 9273  T
Q  141 taaagaaatacctatgaag-gttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||    
T  9272 taaagaagtacctatgaagaattatacgatgtttatgatgtgaat 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 8255 - 8201
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatga 95  Q
    ||||| || ||||||||||||| || |||||||||||||||| ||||||||||||    
T  8255 gagtctaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 8201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 36697 - 36840
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  36697 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgt 36796  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||| |||||||||||| |||||    
T  36797 taaagaagtacctatgaagattatatgatgtttatgatatgaat 36840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 53324 - 53279
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  53324 atgttatgttattgatgatgattgaatgctgtgattacttgataat 53279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 189988 - 190131
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | |||||||    
T  189988 gagtcaaagtcgttgttgatgaattataatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttcttcccatgtgttgt 190087  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  190088 taaagaagtacctatgaagattatacgatatttatgatgtgaat 190131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 39244505 - 39244648
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  39244505 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgtgttgt 39244604  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  39244605 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 39244648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 39248060 - 39248203
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  39248060 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgtgttgt 39248159  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  39248160 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 39248203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 21406867 - 21406733
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaat 149  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |    
T  21406867 tcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagctgtcgagttgtcttctacctatgtgttgttaaagaagt 21406768  T
Q  150 acctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||| |||| ||||||||||||||||||||||||    
T  21406767 acctacgaagattatacgatgtttatgatgtgaat 21406733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 41781895 - 41782027
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatac 151  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||| |||    
T  41781895 gttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtac 41781994  T
Q  152 ctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||||| ||||| ||||||||||||||||||    
T  41781995 ctatgaagattatatgatgtttatgatgtgaat 41782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 20229593 - 20229736
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||  |||| |||||||    
T  20229593 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccgcctatgtgttgt 20229692  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  20229693 taaagaagtacctacgaagattatacgatgtttatgatgtgaat 20229736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 33797039 - 33796896
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| | ||||| |    
T  33797039 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctatgagttgtcgagttgtcttccacccatgtgttat 33796940  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  33796939 taaagaagtacctatgaagattatacgatatttatgatgtgaat 33796896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 41388605 - 41388748
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41388605 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgtgttgt 41388704  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||||| |||||| |||| |||||||||||| ||| |||||||    
T  41388705 taaagaagtacctacgaagattatacgatgttcatggtgtgaat 41388748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 22131466 - 22131602
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||| |||||| | |||||||    
T  22131466 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagctgtcatctacccatgtgttgt 22131565  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  22131566 taaagaagtacctatgaagattatacgatgttcatga 22131602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 1925740 - 1925870
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  1925740 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 1925839  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  1925840 taaagaagtacctacgaagattatacgatgt 1925870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 20924754 - 20924884
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  20924754 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 20924853  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| |||||| |||| |||||||||||    
T  20924854 taaagaagtacctacgaagattatacgatgt 20924884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 48603001 - 48602865
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||  ||||||||||||||| | |||||||    
T  48603001 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagctgttaatgaattatcatctatgagttgctgagttgtcttctacccatgtgttgt 48602902  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  48602901 taaagaagtacctatgaagattatacgatgttcatga 48602865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 16376044 - 16376176
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  16376044 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 16376143  T
Q  140 ttaaagaaatacctatgaaggttatacgatgtt 172  Q
    |||||||| |||||| |||| ||||||||||||    
T  16376144 ttaaagaagtacctacgaagattatacgatgtt 16376176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 1010243 - 1010112
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  1010243 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 1010144  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  1010143 ttaaagaagtacctacgaagattatacgatgt 1010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 52639061 - 52638930
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  52639061 gagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 52638962  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  52638961 ttaaagaagtacctacgaagattatacgatgt 52638930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 1009819 - 1009758
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009819 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 1009758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 1926163 - 1926224
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926163 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 1926224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 20925177 - 20925238
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925177 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 20925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 52634890 - 52634829
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634890 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 52634829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 23967482 - 23967335
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagtt--------gtcgagttgtcttctaccta 132  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||| |||||| ||||| | |||||        || |||||||||||||| ||    
T  23967482 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgctgaattgtcatccatgagttgttaagtagttgagttgtcttctacata 23967383  T
Q  133 agtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgt 180  Q
     |||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  23967382 tgtgttgttaatgaagtacttatgaagattatacgatgtttatgatgt 23967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 16376414 - 16376475
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16376414 ttattaagtgaatattatgttatgttattgatgatgatcaaatgttgtgattacttggtaat 16376475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 33796669 - 33796608
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33796669 ttattaagtgaatattatgttatgttattgaagatgatcgaatgttgtgattacttggtaat 33796608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 39244963 - 39245024
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39244963 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 39245024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 39248518 - 39248579
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39248518 ttattaagtgaatattatgttatgttattgatgatgatcgaacgttgtgattacttggtaat 39248579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 41389411 - 41389472
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  41389411 ttattaagtgaatattatattatgttattgatgatgatcgaacgttgtgattacttggtaat 41389472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 42911889 - 42911816
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||| ||||| | |||||||    
T  42911889 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagttgt 42911816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 14238700 - 14238777
Alignment:
Q  41 gagtcaaattcgttgttgatgaattat----catccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||| | |||||||    
T  14238700 gagtcaaagtcgttgttgatgaattatatatcatccatgagttgttaagttgttgatgaattatcatccatgagttgt 14238777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 48520018 - 48519946
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    ||||||| | ||||||||||| || |||||||||||||||| ||||||||||||||| ||||| | |||||||    
T  48520018 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagttgt 48519946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 14238748 - 14238787
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  14238748 gttgttgatgaattatcatccatgagttgttaagttgttg 14238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 19675591 - 19675540
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  19675591 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 19675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 3705436 - 3705481
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  3705436 atgttatgttattgatgatgattgaatgatgtgattacttgataat 3705481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 21172771 - 21172726
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  21172771 atgttatgttattgatgatgattgaatgctgtgattacttgataat 21172726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 21312887 - 21312842
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||    
T  21312887 atgttatgttattgatgatgattgaatgttgggattacttgataat 21312842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 42911845 - 42911805
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  42911845 gttgttgatgaattgtcatccatgagttgttaagttgttga 42911805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 20241667 - 20241616
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || || ||||||||||||| |||||||||    
T  20241667 gagtcaaagtcgttgttgatgagttgtcgtccatgagttgttaagttgttga 20241616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 48519975 - 48519913
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||||||||| ||||||||||||||||  |||||||| || || ||||| | |||||||    
T  48519975 gttgttgatgaattgtcatccatgagttgttaggttgttgacgagttgtcatccatgagttgt 48519913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 36819644 - 36819689
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||| ||||||||| ||||| |||||||||||| ||||    
T  36819644 atgttatgttatagatgatgattgaatgctgtgattacttgataat 36819689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 18394334 - 18394370
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgatta 335  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  18394334 atgttatgttattgatgatgattgaatgatgtgatta 18394370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 14698 - 14828
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  14698 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgt 14797  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| ||||||||||| || ||||||||    
T  14798 taaagaagtacctatgaagattttacgatgt 14828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 15130 - 15191
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15130 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 15191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 102 - 246
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagtt-gtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||||||||||| | ||||||    
T  102 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 201  T
Q  140 ttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||    
T  202 ttaaagaagtacctatgaagattatacgatgtttacgatgtgaat 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 88; Significance: 4e-42; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 80053 - 79918
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagtt-gtcgagttgtcttctacctaagtgttgttaaagaaa 148  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||| |||||||||||||||||||| ||||| ||||||||     
T  80053 tcgttgttgatgaattatcatccataagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacctatgtgttattaaagaag 79954  T
Q  149 tacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||| |||| ||||||||||||||||||||||||    
T  79953 tacctacgaagattatacgatgtttatgatgtgaat 79918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 66110 - 66240
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||||||||| | |||| |||||||||| ||||||| | |||||||    
T  66110 gagtcaaagtcgttgtttatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctacccatgtgttgt 66209  T
Q  141 taaagaaatacctatgaaggttatacgatgt 171  Q
    ||||||| || ||| |||| |||||||||||    
T  66210 taaagaagtagctacgaagattatacgatgt 66240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 62197 - 62324
Alignment:
Q  44 tcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaa 143  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||  | |||| |||||||||| ||||||| | ||||||||||    
T  62197 tcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatacatgagtcgtcgagttgtgttctacccatgtgttgttaa 62296  T
Q  144 agaaatacctatgaaggttatacgatgt 171  Q
    |||| || ||| |||| |||||||||||    
T  62297 agaagtagctacgaagattatacgatgt 62324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 79669 - 79608
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  79669 ttattaagtgaatattgtgttatgttattgatgatgatcgaatgttgtgattacttggtaat 79608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 312
Target Start/End: Original strand, 62679 - 62708
Alignment:
Q  283 ttattaagtgaatattatgttatgttattg 312  Q
    ||||||||||||||||||||||||||||||    
T  62679 ttattaagtgaatattatgttatgttattg 62708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 25182 - 25318
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||  ||||||| ||||||| | |||||||    
T  25182 gagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctacgagttgctgagttgtattctacccatgtgttgt 25281  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  25282 taaagaagtacctatgaagattatacgatgttcatga 25318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 8090 - 8211
Alignment:
Q  56 ttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctat 155  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||| ||||||||||||||| | |||||||||||||| |||||||    
T  8090 ttgatgaattatcatccatgagttgttaagttgtcgatgaattgtcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctat 8189  T
Q  156 gaaggttatacgatgtttatga 177  Q
    |||| |||||||||||| ||||    
T  8190 gaagattatacgatgttcatga 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 8042 - 8124
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtc 123  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |||||||  |||||||    
T  8042 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttgatgaattatcatccatgagttgttaagttgtc 8124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 8176 - 8312
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||   |||||||||||||| | |||||||    
T  8176 gagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagttgctaagttgtcttctacccatgtgttgt 8275  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  8276 taaagaagtacctatgaagattatacgatgttcatga 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 371 - 241
Alignment:
Q  50 tcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaat 149  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||  ||||| | ||||||| | |||||||||||||| |    
T  371 tcgttgttgatgaattatcatccatgagttgtcaagttgttaatgaattatcatctatgagttgctgagttttattctacccatgtgttgttaaagaagt 272  T
Q  150 acctatgaaggttatacgatgtttatgatgt 180  Q
    |||||||||| |||||||||||| |||||||    
T  271 acctatgaagattatacgatgttcatgatgt 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 20790 - 20937
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgtt--gatgaattatcatctaagagttgtcgagttgtcttctacctaagtgtt 138  Q
    |||||||| | ||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||| ||||||||||||||| | |||||    
T  20790 gagtcaaagttgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgtt 20889  T
Q  139 gtt--aaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||  |||||| ||||||||||| ||||| ||||||||||| ||||||    
T  20890 gttaaaaagaagtacctatgaagattatatgatgtttatgacgtgaat 20937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 3251 - 3115
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||||||||||||||| |||| | ||||||| | ||||||||||||| ||||||  ||||||| ||||||| | |||||||    
T  3251 gagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgtattctacccatgtgttgt 3152  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  3151 taaagaagtacctatgaagattatacgatgttcatga 3115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 7314 - 7178
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgt 140  Q
    |||||||| |||||||||||||||||||||||||| |||| | ||||||| | ||||||||||||| ||||||  ||||||| ||||||| | |||||||    
T  7314 gagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgtattctacccatgtgttgt 7215  T
Q  141 taaagaaatacctatgaaggttatacgatgtttatga 177  Q
    ||||||| ||||||||||| |||||||||||| ||||    
T  7214 taaagaagtacctatgaagattatacgatgttcatga 7178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 5685 - 5816
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  5685 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 5784  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  5785 ttaaagaagtacctacgaagattatacgatgt 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 6032 - 6090
Alignment:
Q  286 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6032 ttaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 6090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 11942 - 11811
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  11942 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 11843  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  11842 ttaaagaagtacctacgaagattatacgatgt 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 11598 - 11539
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggta 342  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11598 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggta 11539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 10395 - 10494
Alignment:
Q  85 gttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  10395 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatgatgtgaat 10494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 10384 - 10424
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||||||||||||||||||  ||||||||    
T  10384 gagtcaaagtcgttgttgatgaattatcatctgtgagttgt 10424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 33272 - 33403
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  33272 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 33371  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  33372 ttaaagaagtacctacgaagattatacgatgt 33403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 33696 - 33757
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 33757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 67887 - 68018
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  67887 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 67986  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| |||| |||||||||||    
T  67987 ttaaagaagtacctacgaagattatacgatgt 68018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 68190 - 68251
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68190 ttattaaatgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 68251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 4455 - 4546
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctaccta 132  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  4455 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccta 4546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 4868 - 4929
Alignment:
Q  283 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4868 ttattaagtgaatattatgttatgttattgatgatgatcgaatgttgtgattacttggtaat 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 59305 - 59436
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagag-ttgtcgagttgtcttctacctaagtgttg 139  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||| ||||||| | ||||||    
T  59305 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttg 59404  T
Q  140 ttaaagaaatacctatgaaggttatacgatgt 171  Q
    |||||||| |||||| || | |||||||||||    
T  59405 ttaaagaagtacctacgatgattatacgatgt 59436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 51300 - 51382
Alignment:
Q  102 atctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatacctatgaaggttatacgatgtttatgatgtgaat 184  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  51300 atctatgagtcgtcgagttgtcttctacctatgtgttgttaaagaagtacctacgaagattatacgatgtttatgatgtgaat 51382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 12710 - 12783
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||    
T  12710 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgtattatcatccatgagttgt 12783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 12754 - 12793
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  12754 gttgttgatgtattatcatccatgagttgttaagttgttg 12793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 29332 - 29259
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||    
T  29332 gagtcaaagtcgttgttgatgaattattatccatgagttgttaagttgttgatgaattatcatccatgagttgt 29259  T

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Target: scaffold0205; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 29288 - 29248
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  29288 gttgttgatgaattatcatccatgagttgttaagttgttga 29248  T

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Target: scaffold0023 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 18064 - 18137
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||    
T  18064 gagtcaaagtcgttgttgatgaattatcatccttgagttgttaagttgttgatgaattatcatccatgagttgt 18137  T

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Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 18108 - 18147
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  18108 gttgttgatgaattatcatccatgagttgttaagttgttg 18147  T

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Target: scaffold0278 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 7274 - 7141
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaag--------agttgtcgagttgtcttctacctaagtgttgttaa 143  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||| ||||||| |        |||||| ||||||||| |||||   ||||||||||    
T  7274 gttgttgatgaattgtcatccatgagttgtcaagttgttgatgaattgtcatctatgagttgttaagttgttgagttgtctgctacccctgtgttgttaa 7175  T
Q  144 agaaatacctatgaaggttatacgatgtttatga 177  Q
    |||| ||||||||||| |||||||||||| ||||    
T  7174 agaagtacctatgaagattatacgatgttcatga 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 7315 - 7237
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgt 122  Q
    |||||||| |||||||||||||||||||||||||||   ||| ||||||||||||||| ||||| | |||||||| ||||||    
T  7315 gagtcaaagtcgttgttgatgaattatcatccatga---gttaagttgttgatgaattgtcatccatgagttgtcaagttgt 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 10737 - 10664
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||    
T  10737 gagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagttgt 10664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 10693 - 10654
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttg 91  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  10693 gttgttgatgaattaccatccatgagttgttaagttgttg 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 4449 - 4329
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagtgttgttaaagaaatac 151  Q
    ||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||| ||  |||||||||||||| | |||||||||| ||| | |    
T  4449 gttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgtcttctacccatgtgttgttaatgaagtgc 4350  T
Q  152 ctatgaaggttatacgatgtt 172  Q
     ||||||| ||||| ||||||    
T  4349 ttatgaagattatatgatgtt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 4493 - 4420
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| || |||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  4493 gagtcaaaatcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 4420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 4e-17; HSPs: 6)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 15546 - 15619
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||||||    
T  15546 gagttaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatccatgagttgt 15619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 15689 - 15741
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  15689 gttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatc 15741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 15656 - 15718
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||| ||||| | |||||||    
T  15656 gttgttgatgaattgtgatccatgagttgtttagttgttgatgaattgtcatccatgagttgt 15718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 15590 - 15636
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaatt 98  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||    
T  15590 gttgttgatgaattgtcatccatgagttgtttagttgttcatgaatt 15636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 15722 - 15774
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||||||||| |||||| |||||||||  |||||||||||||| |||||    
T  15722 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatc 15774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 15623 - 15669
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttgatgaatt 98  Q
    |||||| ||||||| || ||||||||||||| |||||||||||||||    
T  15623 gttgttcatgaattgtcgtccatgagttgttaagttgttgatgaatt 15669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 19275 - 19348
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  19275 gagtcaaaatcgttgttgatgaattgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 19348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 63455 - 63512
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaatt 98  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  63455 gagtcaaattcgttgttgatgaattgtcatccatgagttgttaagttcttgatgaatt 63512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 28847 - 28796
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  28847 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttga 28796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 634 - 707
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  634 gagtcaaagtcgttgttgatgagttctcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 678 - 718
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  678 gttgttgatgagttgtcatccatgagttgttaagttgttga 718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 13918 - 13981
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||||| || |||||    
T  13918 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 6211 - 6174
Alignment:
Q  271 gtgttgtttaagttattaagtgaatattatgttatgtt 308  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6211 gtgttgtttaagttattaagtgaatattatgttatgtt 6174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 833 - 906
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||| || ||||||||||||| |||||||||||||||| |||| |||| ||||| ||||| | |||||||    
T  833 gagtcaaagtctttgttgatgaattgtcatccatgagttgttaagttattgaggaattgtcatccatgagttgt 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 18958 - 18918
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttg 339  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  18958 atgttatgttattgatgatgattgaatgttgtgattacttg 18918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 12674 - 12634
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttg 339  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  12674 atgttatgttattgatgatgattgaatgctgtgattacttg 12634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 10755 - 10704
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  10755 gagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 10704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 102311 - 102361
Alignment:
Q  42 agtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  102311 agtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttga 102361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 999 - 954
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  999 atgttatgttattgatgatgattgaatgctgtgattacttgataat 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 1537 - 1492
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  1537 atgttatgttattgatgatgattgaatgatgtgattacttgataat 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 20027 - 20088
Alignment:
Q  53 ttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgt 114  Q
    |||||||||| || |||||||||||||||| |||||||||||| || ||||| | |||||||    
T  20027 ttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagttgt 20088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 7133 - 7093
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  7133 gagtcaaagtcgttgttgatgagttgtcatccatgagttgt 7093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 14252 - 14212
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgt 81  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  14252 gagtcaaagtcgttgttgatgagttgtcatccatgagttgt 14212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 20059 - 20099
Alignment:
Q  52 gttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  20059 gttgttgatgagttgtcatccatgagttgttaagttgttga 20099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 66762 - 66807
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  66762 atgttatgttattgatgatgattgaatgctgtgattacttgttaat 66807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 195296 - 195341
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  195296 atgttatgttattgatgatgattgaatgatgtgattacttgataat 195341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 173064 - 173019
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  173064 atgttatgttattgatgatgattgaatgctgtgattacttgataat 173019  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 228705 - 228745
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttg 339  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  228705 atgttatgttattgatgatgattgaatgctgtgattacttg 228745  T

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Target: scaffold1633 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 107 - 44
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatc 104  Q
    |||||||  |||||||| |||| || |||||||||||||||| |||||||||||| || |||||    
T  107 gagtcaatgtcgttgttcatgagttgtcatccatgagttgttaagttgttgatgagttgtcatc 44  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 116668 - 116617
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgttcagttgttga 92  Q
    |||||||| ||||||||||||| || |||||||||||| ||| |||||||||    
T  116668 gagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgttga 116617  T

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Target: scaffold0550 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 7217 - 7176
Alignment:
Q  303 tatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  7217 tatgttattgatgatgattgaatgatgtgattacttgataat 7176  T

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Target: scaffold0228 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 18968 - 19013
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||    
T  18968 atgttatgttattgatgatgattgaatactgtgattacttgataat 19013  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 20347 - 20392
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgattacttggtaat 344  Q
    |||||||||||| ||||||||| ||||| |||||||||||| ||||    
T  20347 atgttatgttatcgatgatgattgaatgctgtgattacttgataat 20392  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 70849 - 70808
Alignment:
Q  41 gagtcaaattcgttgttgatgaattatcatccatgagttgtt 82  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  70849 gagtctaagtcgttgttgatgaattatcatctatgagttgtt 70808  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 4572 - 4608
Alignment:
Q  299 atgttatgttattgatgatgatcgaatgttgtgatta 335  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4572 atgttatgttattgatgatgattgaatgatgtgatta 4608  T

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