View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2538_low_6 (Length: 386)
Name: NF2538_low_6
Description: NF2538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2538_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 97 - 297
Target Start/End: Original strand, 32626905 - 32627106
Alignment:
| Q |
97 |
gtagttgtgtctgataaatagtcttttgctttaccccacaccacagaatataaaccaactgcaataatcagggctccaatgatactgtaatcaacaaata |
196 |
Q |
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| T |
32626905 |
gtagttgtgtctgataaatagtcttttgctttaccccacaccacagaatataaaccaactgcaataatcagggctccaatgatactgtaatcaacaaata |
32627004 |
T |
|
| Q |
197 |
gagaacatcaataaggttatttttagtgaatttgacatttatcaaaactctacgaagccggacactccttagattaagtgtgt-cctgatgtttgacatg |
295 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |
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| T |
32627005 |
gagaacatcaataagattatttttagtgaatttgacatttatcaaaaccctacgaagccggacactccttagattaagtgtgtccctgatgttggacatg |
32627104 |
T |
|
| Q |
296 |
tg |
297 |
Q |
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|| |
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| T |
32627105 |
tg |
32627106 |
T |
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