View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2539_high_7 (Length: 236)
Name: NF2539_high_7
Description: NF2539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2539_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 46968343 - 46968117
Alignment:
| Q |
1 |
cggtcactcttgcaaatcataatttcatatatgtatgaccacgacactgggacaatacgctaagactaagttcataagatttataagattgacgagctta |
100 |
Q |
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| T |
46968343 |
cggtcactcttgcaaatcataatttcatatatgtatgaccacgacactgggacaatacgctaagactaagttcataagatttataagattgacgagctta |
46968244 |
T |
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| Q |
101 |
ctctttttgaccaaatacataagcttagcttataactatatttttaaaataactacaaaatattttttaacttaacttacatgtatgcgtgcatgattct |
200 |
Q |
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| T |
46968243 |
ctctttttgaccaaatacataagcttagcttataactatattttcaaaataactacaaaatactttttaacttaacgtacatgtatgcgtgcatgattct |
46968144 |
T |
|
| Q |
201 |
gatctcgtttattaaaccaagaataat |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
46968143 |
gatctcgtttattaaaccaagaataat |
46968117 |
T |
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