View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2539_low_1 (Length: 647)
Name: NF2539_low_1
Description: NF2539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2539_low_1 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 108; Significance: 7e-54; HSPs: 58)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 425 - 624
Target Start/End: Original strand, 48734899 - 48735098
Alignment:
| Q |
425 |
cttcaaattcgcatgaatagaagcgatactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgct |
524 |
Q |
| |
|
|||||||||| | |||||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||| || ||||||||||||||||||||||| | |
|
|
| T |
48734899 |
cttcaaattcagaagaataggggcgatgctctagcagctgtcctttgtcattgtacctcaccaatccagtctcctgatctgttccaataatatcaccatt |
48734998 |
T |
 |
| Q |
525 |
ttttgtataacacaatggggaaaagctctcgttgggagtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatc |
624 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||| |||| ||||||||| || |||||| |
|
|
| T |
48734999 |
ttttgtacaacaaaatggggaaaagctctcgttgggagtgccatcaacagacacagcatgagttttagtccaagacgaattcactttgtattctttcatc |
48735098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 48864999 - 48864877
Alignment:
| Q |
48 |
agtgtaattgtgattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaac |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||||| | | |||||||||||||||||| |
|
|
| T |
48864999 |
agtgtaattgtgattttgatcttgatcaacatgcaaacattcagcaaataaattacaatataaaacaatttcaagcagcaaacagaacatacattagaac |
48864900 |
T |
 |
| Q |
148 |
ccaatccagttgcacatacataa |
170 |
Q |
| |
|
||||||||||| ||||| ||||| |
|
|
| T |
48864899 |
ccaatccagttacacatgcataa |
48864877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 45371122 - 45371326
Alignment:
| Q |
54 |
attgtgattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaatc |
153 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| | || || || ||||||||||||||| ||||| |
|
|
| T |
45371122 |
attgtgatcttgatcttgatcaacatgcataaattcataaaataaattacattataaaacaatttctaacagtgatcacaacatacattagaactcaatc |
45371221 |
T |
 |
| Q |
154 |
cagttgcacatacat-----------aatcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgaca |
242 |
Q |
| |
|
|| | ||||| ||| ||||||| ||||| ||||||||| ||||||| || |||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
45371222 |
caactacacatgcataaataaaagtgaatcacacaaacagagttgtcaaagtttccaagaagcatattacaaacaattaatcaataaacatttcatgaca |
45371321 |
T |
 |
| Q |
243 |
tatta |
247 |
Q |
| |
|
||||| |
|
|
| T |
45371322 |
tatta |
45371326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 48734453 - 48734556
Alignment:
| Q |
19 |
atttctaatgaagtgctttaaataagagaagtgtaattgtgattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaattt |
118 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || |
|
|
| T |
48734453 |
atttataatgaagtgctttgaataagagtagtgtaatggtgattttgatcttgatcaacatgcataaattcatcaaataaattacggtataaaacaaatt |
48734552 |
T |
 |
| Q |
119 |
caag |
122 |
Q |
| |
|
|||| |
|
|
| T |
48734553 |
caag |
48734556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 464 - 636
Target Start/End: Original strand, 49038411 - 49038577
Alignment:
| Q |
464 |
gtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttgggagt |
563 |
Q |
| |
|
||||||||||||| ||||||||||||| | | | | ||||||||||||||||| ||| ||||||||| |||| | ||||||||| | |||| | |
|
|
| T |
49038411 |
gtcctttgtcatcatacttcatcaatcgattataaccatctgttccaataatatgaccactttttgtacaacatataggggaaaag------tagggaat |
49038504 |
T |
 |
| Q |
564 |
gccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||| ||||||||||| || |||| ||||||||||| ||||| |||||||| || |||||||||||||||||| |
|
|
| T |
49038505 |
gccactaatagacagaacaagagtcttagtccaagacgaatgaactttgtattctttcatcacccatatttca |
49038577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 48871616 - 48871500
Alignment:
| Q |
49 |
gtgtaattgtgattttgatcttgatcaacatgcataaattcatcaa-ctaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaac |
147 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||| ||||| |||| |||| || ||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
48871616 |
gtgtaattgtgattttgatcttgtttaacatgcaaaaatttatcaaactaatttaccatgtaaaacaatttcaagcagtgaccaaaacatacattagagc |
48871517 |
T |
 |
| Q |
148 |
ccaatccagttgcacat |
164 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
48871516 |
tcaatccaattacacat |
48871500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 48876920 - 48876804
Alignment:
| Q |
49 |
gtgtaattgtgattttgatcttgatcaacatgcataaattcatcaa-ctaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaac |
147 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||| ||||| |||| |||| || ||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
48876920 |
gtgtaattgtgattttgatcttgtttaacatgcaaaaatttatcaaactaatttaccatgtaaaacaatttcaagcagtgaccaaaacatacattagagc |
48876821 |
T |
 |
| Q |
148 |
ccaatccagttgcacat |
164 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
48876820 |
tcaatccaattacacat |
48876804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 48146910 - 48147066
Alignment:
| Q |
70 |
tgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaatccagttgcacatacat- |
168 |
Q |
| |
|
||||||||||| | ||| |||| || |||||||||||||| |||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||| ||| |
|
|
| T |
48146910 |
tgatcaacatgtagaaactcataaaataaattacaatatagaacaatttcaggcagtgaccacaacatacattagaactcaatccagttacacatgcata |
48147009 |
T |
 |
| Q |
169 |
----------aatcacaaaaacaaagttgtcaacatttccaataaacatattacaaa |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
48147010 |
aataacactgaatcacgcaaacaaagttgtcaacatttccaagaaacatactacaaa |
48147066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 48853537 - 48853459
Alignment:
| Q |
177 |
aaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagct |
255 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||| ||| | |||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
48853537 |
aaacaaagttgtaaacatttccaattaacatatcacagataattgaccaacaaacatttcatgacatattacatcagct |
48853459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 48734767 - 48734855
Alignment:
| Q |
326 |
aagagttcatagtacagtataaatatcaagaaaatgaatggtgaagaagaatattccacaacctcattctttcttcttaggcttgttca |
414 |
Q |
| |
|
||||||||||| | || ||||||||||||||||||| |||||||| ||||| ||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
48734767 |
aagagttcataatgcaatataaatatcaagaaaatggatggtgaaaaagaacatttcacaacctcatatcttcttcttaggcttgttca |
48734855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 229 - 396
Target Start/End: Complemental strand, 48864846 - 48864686
Alignment:
| Q |
229 |
aacatttcatgacatattacattagctcatgtgatagtactgattcatgctatacaaatgcatgcaaacacatagtactctacagatgcagccactgaag |
328 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||| ||||||||||| |||||||| |||| ||||| |||||| || ||| |
|
|
| T |
48864846 |
aacatttcactacatattacattagctcatgtggta-tactgactcat--attacaaatgcatttaaacacatggtaccctacaaatgcagtcatccaag |
48864750 |
T |
 |
| Q |
329 |
agttcatagtacagtataaatatcaagaaaatgaatggtgaagaagaatattccacaacctcattctt |
396 |
Q |
| |
|
|||||||| ||| ||||||||||||||| ||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
48864749 |
agttcataacacaatataaatatcaagaa----aatagtgaaggagaatatttcacaacctcattctt |
48864686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 48155562 - 48155730
Alignment:
| Q |
74 |
caacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaatccagttgcacatacat----- |
168 |
Q |
| |
|
||||||||||||| ||| || ||||||| || ||||||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||| || |
|
|
| T |
48155562 |
caacatgcataaactca--aaataaattaaaaaataaaacaatttcaagcaatgaccacaacatacattagaactcaatccagtgacacatgtataaata |
48155659 |
T |
 |
| Q |
169 |
------aatcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacat |
233 |
Q |
| |
|
||||||| |||||||| ||||||||| |||| ||||||| |||||| | ||||||||||||||| |
|
|
| T |
48155660 |
tcagtgaatcacacaaacaaagctgtcaacatgcccaacaaacatactacaaatagttgaccaataaacat |
48155730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 636
Target Start/End: Original strand, 48147235 - 48147412
Alignment:
| Q |
453 |
ctctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctc |
552 |
Q |
| |
|
|||||| |||||||||||||| | ||||||| |||| |||| ||| || |||||||||||| ||||| |||||||| | || | ||||||||| |
|
|
| T |
48147235 |
ctctagaagctgtcctttgtcgttatacttcaacaattcagtttcaccatttgttccaataatgtcaccactttttgtggagcatataggggaaaag--- |
48147331 |
T |
 |
| Q |
553 |
tcgttgggagtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
| |||| |||||| |||||||| | | |||| ||||||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
48147332 |
---tagggaatgccatcaatagacaaattaagagtcttagtccaagacgaatgcactttgtattctttcatcacccatatttca |
48147412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 48887302 - 48887186
Alignment:
| Q |
49 |
gtgtaattgtgattttgatcttgatcaacatgcataaattcatc-aactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaac |
147 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| ||||||||| |||||| |||| || |||||||||||||||| ||||| ||||| ||||||| | |
|
|
| T |
48887302 |
gtgtaattgtgattttgatcttgtttaacatgctaaaattcatcaaactaatttaccatgaaaaacaatttcaagcagtgaccaaaacatgcattagagc |
48887203 |
T |
 |
| Q |
148 |
ccaatccagttgcacat |
164 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
48887202 |
tcaatccaattacacat |
48887186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 636
Target Start/End: Original strand, 45365784 - 45365919
Alignment:
| Q |
501 |
atctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttgggagtgccattaatagacagaccatgagttttagtccaagat |
600 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || || ||||||||| | ||||| |||||| ||||| ||| | ||||| || |||||||| |
|
|
| T |
45365784 |
atctgttccaataatatcaccgctttttgtagagcataaaggggaaaagtattgagtgggaatgccatcaataggaagaacgtgagtctttgtccaagac |
45365883 |
T |
 |
| Q |
601 |
gaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||| ||||||| || || |||||||||||||||||| |
|
|
| T |
45365884 |
gaacgcactttatattctttcatcacccatatttca |
45365919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 636
Target Start/End: Original strand, 45371638 - 45371773
Alignment:
| Q |
501 |
atctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttgggagtgccattaatagacagaccatgagttttagtccaagat |
600 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||||||| | | ||| ||||| |||| ||| || ||| ||||||||||| |
|
|
| T |
45371638 |
atctgttccaattatatcaccgctttttgtacaacacaatggggaaaagtaccgagttggaacgccatcgataggaagaacaaaagtcttagtccaagac |
45371737 |
T |
 |
| Q |
601 |
gaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||||| |
|
|
| T |
45371738 |
gaatgcactttgtattctttcataacccatatttca |
45371773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 570 - 636
Target Start/End: Complemental strand, 7790508 - 7790442
Alignment:
| Q |
570 |
aatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||| ||| || |||||||||||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
7790508 |
aatagaaagaacaagagttttagtccaagacgaatgcactttgtattctttcatcacccatatttca |
7790442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 636
Target Start/End: Complemental strand, 48871096 - 48870922
Alignment:
| Q |
462 |
ctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttggga |
561 |
Q |
| |
|
|||||| |||||||| ||||||| ||||||| | || || || ||||||||||||||| ||||||||| | ||||||||||||||| ||| | || | |
|
|
| T |
48871096 |
ctgtccattgtcatcatacttcaccaatccaataccactatgtgctccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaa |
48870997 |
T |
 |
| Q |
562 |
gtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|| ||| || ||| ||| || |||| || |||||||| || | ||||||||| || ||||||||||| |||||| |
|
|
| T |
48870996 |
atgtcatcaacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttca |
48870922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 636
Target Start/End: Complemental strand, 48876400 - 48876226
Alignment:
| Q |
462 |
ctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttggga |
561 |
Q |
| |
|
|||||| |||||||| ||||||| ||||||| | || || || ||||||||||||||| ||||||||| | ||||||||||||||| ||| | || | |
|
|
| T |
48876400 |
ctgtccattgtcatcatacttcaccaatccaataccactatgtgctccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaa |
48876301 |
T |
 |
| Q |
562 |
gtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|| ||| || ||| ||| || |||| || |||||||| || | ||||||||| || ||||||||||| |||||| |
|
|
| T |
48876300 |
atgtcatcaacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttca |
48876226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 7878797 - 7878745
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
7878797 |
gagttttaatccaagatgaatgcactttgtattctttcatcacccatatttca |
7878745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 7908716 - 7908664
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
7908716 |
gagttttattccaagatgaatgcactttgtattctttcatcacccatatttca |
7908664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 584 - 636
Target Start/End: Original strand, 48156076 - 48156128
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
48156076 |
gagttttagtccaagaagaatgcactttgtattcgttcatcacccatatttca |
48156128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 48160479 - 48160531
Alignment:
| Q |
66 |
atcttgatcaacatgcataaattcatcaactaaattacaatataaaacaattt |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||| | ||||||||||||||||||||| |
|
|
| T |
48160479 |
atcttgatcaacatgcataaactcatcaaattaattacaatataaaacaattt |
48160531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 636
Target Start/End: Complemental strand, 48853226 - 48853043
Alignment:
| Q |
453 |
ctctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctc |
552 |
Q |
| |
|
|||||||| ||||||| | |||| ||||||| ||||||| | ||| ||| ||||||||||||||||| || |||||| |||| | |||||||||| |
|
|
| T |
48853226 |
ctctagcaaatgtccttcgccatcatacttcaccaatccactatcaccatccgttccaataatatcaccactctttgtacaacatattggggaaaagtag |
48853127 |
T |
 |
| Q |
553 |
tcgttgggagtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
| ||||| || | ||| ||| ||| || |||| ||||||||||| ||| |||||||||| || ||||| |||||||||||| |
|
|
| T |
48853126 |
tgagtgggaatggaactaaaagaaagaacaagagtcttagtccaagacgaacgcactttgtattctttcatgacccatatttca |
48853043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 49043325 - 49043427
Alignment:
| Q |
21 |
ttctaatgaagtgctttaaataagagaagtgtaattgtgattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttca |
120 |
Q |
| |
|
||||||||||||||||| ||| | || ||||| |||| ||||||||||| | |||||||||||| ||||||| ||||||||||| || ||||||| || |
|
|
| T |
49043325 |
ttctaatgaagtgctttgaatcaaagt-gtgtatttgtaattttgatctttagtaacatgcataaactcatcaaataaattacaatttataacaattaca |
49043423 |
T |
 |
| Q |
121 |
agca |
124 |
Q |
| |
|
|||| |
|
|
| T |
49043424 |
agca |
49043427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 636
Target Start/End: Complemental strand, 48886782 - 48886608
Alignment:
| Q |
462 |
ctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaagctctcgttggga |
561 |
Q |
| |
|
|||||| |||||||| ||||||| ||||||| | || || || ||||||||||||||| ||||||||| | ||||||||||||||| ||| | | | |
|
|
| T |
48886782 |
ctgtccattgtcatcatacttcaccaatccaataccactatgtgctccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcagaa |
48886683 |
T |
 |
| Q |
562 |
gtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|| ||| || ||| ||| || |||| || |||||||| || | ||||||||| || ||||||||||| |||||| |
|
|
| T |
48886682 |
atgtcatcaacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttca |
48886608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 636
Target Start/End: Original strand, 49043681 - 49043867
Alignment:
| Q |
450 |
atactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaag |
549 |
Q |
| |
|
||||||||| | ||||||||| ||||| ||||||| ||||||| ||| ||| ||||||||||||||||| |||||||| |||| | ||| | ||| |
|
|
| T |
49043681 |
atactctagaaactgtcctttttcatcatacttcaccaatccaacttcaccatcagttccaataatatcaccaatttttgtacaacatattggagcgaag |
49043780 |
T |
 |
| Q |
550 |
ctctcgttgggagtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
| ||||| || ||| |||||| | | || |||| |||||||| || |||||||||||||| || |||||||||||||||||| |
|
|
| T |
49043781 |
taatgagtgggaatgacatcaatagaaaaaacaagagtcttagtccatgacgaatgcactttgtattctttcatcacccatatttca |
49043867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 636
Target Start/End: Original strand, 49048068 - 49048254
Alignment:
| Q |
450 |
atactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaag |
549 |
Q |
| |
|
||||||||| | ||||||||| ||||||||||||| ||||||| ||| ||| ||| ||||||||||||| ||||||||| || | ||| || ||| |
|
|
| T |
49048068 |
atactctagaaactgtcctttttcatcgtacttcaccaatccaacttcaccatcagttgcaataatatcaccactttttgtacggcatattggagagaag |
49048167 |
T |
 |
| Q |
550 |
ctctcgttgggagtgccattaatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
| | | ||||| || ||| | |||| | | || ||| |||||||| || ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
49048168 |
caatgggtgggaatgacatcagtagaaaaaacaaaagtcttagtccatgacgaatgcactttatactctttcatcacccatatttca |
49048254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 47208870 - 47208773
Alignment:
| Q |
66 |
atcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaatccagttgcaca |
163 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| | ||||| || |||||| || || |||||||||| |||| |
|
|
| T |
47208870 |
atcttgatcaacgcgcataaattcatcaaataaatttcaatatagaacaatttcaactagtgaccacaatatacatcagcactcaatccagttacaca |
47208773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 48170187 - 48170334
Alignment:
| Q |
97 |
aaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaatccagttgcacatacataa-----------tcacaaaaacaaagt |
185 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||| |||||||||||| || |||||||||| ||||| ||||| ||||| |||||||| |
|
|
| T |
48170187 |
aaattacaatataatacaatttctagcagtgaccacaacatacattagcactcaatccagttacacatgcataaataacagtgaatcacacaaacaaagc |
48170286 |
T |
 |
| Q |
186 |
tgtcaacatttccaataaacatattacaaacaattgaccaataaacat |
233 |
Q |
| |
|
| ||||| |||| || ||||||| |||||| | ||||||||||||||| |
|
|
| T |
48170287 |
tatcaacctttcaaacaaacatactacaaatagttgaccaataaacat |
48170334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 7772965 - 7773029
Alignment:
| Q |
177 |
aaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgac |
241 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||| ||||| |||| ||||||||||||| |||||| |
|
|
| T |
7772965 |
aaacaaagttgtcaatatttccaataagcctatgacaaataattaaccaataaacattccatgac |
7773029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 48899618 - 48899526
Alignment:
| Q |
171 |
tcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgac-caataaacatttcatgacatattacattagctcatgtga |
262 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||| |||||| |||| | ||| ||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
48899618 |
tcacacaaacaaagctgtcaatatttccaataagcatattgcaaaatagtgaaacaataaacatttcatgacatattggatcagctcatgtga |
48899526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 50666729 - 50666677
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||||||||||||||||||||||||||||||| || | ||||||||||| |||| |
|
|
| T |
50666729 |
gagttttagtccaagatgaatgcactttgtattcttacatcacccataattca |
50666677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 636
Target Start/End: Complemental strand, 48864444 - 48864397
Alignment:
| Q |
589 |
ttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||||||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
48864444 |
ttagtccaagacgaatgcactttgtattctttcatcacccatatttca |
48864397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 636
Target Start/End: Complemental strand, 48903383 - 48903317
Alignment:
| Q |
570 |
aatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||||| || | ||||||||||||| ||||||||||||| || |||||||||||||||||| |
|
|
| T |
48903383 |
aatagacagaacacaaattttagtccaagacaaatgcactttgtattctttcatcacccatatttca |
48903317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 584 - 633
Target Start/End: Complemental strand, 7771809 - 7771760
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatt |
633 |
Q |
| |
|
||||||||||||| || |||||||||||||| || ||||||||||||||| |
|
|
| T |
7771809 |
gagttttagtccatgacgaatgcactttgtattctttcatcacccatatt |
7771760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 49040378 - 49040455
Alignment:
| Q |
168 |
taatcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatat |
245 |
Q |
| |
|
|||||||| ||||||||||||||| ||| ||||||| ||||||||| | | || ||||||| |||||| |||||||| |
|
|
| T |
49040378 |
taatcacacaaacaaagttgtcaatattaccaataagcatattacagatagttaaccaatatacattttgtgacatat |
49040455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 636
Target Start/End: Original strand, 7773476 - 7773524
Alignment:
| Q |
588 |
tttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||| ||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
7773476 |
tttaatccaagacgaatgcactttgtattctttcatcacccatatttca |
7773524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 7801051 - 7800999
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| || |||| ||||||||||||| |
|
|
| T |
7801051 |
gagttttattccaagacgaatgcactttgtaatctttcaacacccatatttca |
7800999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 7813891 - 7813839
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| || |||| ||||||||||||| |
|
|
| T |
7813891 |
gagttttattccaagacgaatgcactttgtattctttcaacacccatatttca |
7813839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 43595969 - 43596045
Alignment:
| Q |
76 |
acatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccagaacatacattagaacccaat |
152 |
Q |
| |
|
||||||||||| || | || |||||||||| ||||||||||||| |||| ||||| ||||||||||| ||| |||| |
|
|
| T |
43595969 |
acatgcataaactcgtaaaataaattacaaaataaaacaatttcgagcattgaccacaacatacattaaaactcaat |
43596045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 48871468 - 48871388
Alignment:
| Q |
181 |
aaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcatgtg |
261 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| | | | ||||||||| ||||| |||||||| || ||| |||||| |
|
|
| T |
48871468 |
aaagttgtcaacattttcaataaacatattataaatagctaagcaataaacagttcataacatattaaataagcacatgtg |
48871388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 48876772 - 48876692
Alignment:
| Q |
181 |
aaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcatgtg |
261 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| | | | ||||||||| ||||| |||||||| || ||| |||||| |
|
|
| T |
48876772 |
aaagttgtcaacattttcaataaacatattataaatagctaagcaataaacagttcataacatattaaataagcacatgtg |
48876692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 45365269 - 45365343
Alignment:
| Q |
169 |
aatcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacat |
243 |
Q |
| |
|
||||||| |||||||| | |||| |||||||||| ||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
45365269 |
aatcacacaaacaaagatatcaatgtttccaataagcatattacaaattgttaaccaataaacattgcatgacat |
45365343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 531
Target Start/End: Original strand, 45384454 - 45384484
Alignment:
| Q |
501 |
atctgttccaataatatcaccgctttttgta |
531 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
45384454 |
atctgttccaataatatcaccgctttttgta |
45384484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 48887154 - 48887076
Alignment:
| Q |
181 |
aaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcatg |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||| | ||||| | | |||| |||| ||||| |||||||| || |||||||| |
|
|
| T |
48887154 |
aaagttgtcaacattttcaataaacatataataaacagctaagcaattaacagttcataacatattaaataagctcatg |
48887076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 49106107 - 49106173
Alignment:
| Q |
281 |
tacaaatgcatgcaaacacatagtactctacagatgcagccactgaagagttcatagtacagtataa |
347 |
Q |
| |
|
||||||| ||| |||||||||| || |||||| ||||| ||||| ||||||||||| |||| ||||| |
|
|
| T |
49106107 |
tacaaatccattcaaacacatactaatctacaaatgcaaccactcaagagttcataatacaatataa |
49106173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 633
Target Start/End: Original strand, 7237390 - 7237439
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatt |
633 |
Q |
| |
|
|||||||||||||| | ||||||| |||||| || ||||||||||||||| |
|
|
| T |
7237390 |
gagttttagtccaaaacgaatgcattttgtattctttcatcacccatatt |
7237439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 7787540 - 7787475
Alignment:
| Q |
179 |
acaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacata |
244 |
Q |
| |
|
||||||||||||| |||| | |||| ||||| ||||||| | || |||||||||||||||||||| |
|
|
| T |
7787540 |
acaaagttgtcaatattttcgataagcatatgacaaacagtaaacgaataaacatttcatgacata |
7787475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 48889538 - 48889457
Alignment:
| Q |
177 |
aaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcat |
258 |
Q |
| |
|
|||||||| |||||| |||| |||| |||| | |||||| | || || | |||| ||||||||||||||||||| ||||||| |
|
|
| T |
48889538 |
aaacaaagctgtcaatattttcaattaacaaactacaaagagttaacaactaaatatttcatgacatattacatcagctcat |
48889457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 7786878 - 7786826
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||| ||| |||||||| ||||||| ||||| || |||||||||||||||||| |
|
|
| T |
7786878 |
gagtcttattccaagataaatgcacgttgtattctttcatcacccatatttca |
7786826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 37826188 - 37826248
Alignment:
| Q |
186 |
tgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatatt |
246 |
Q |
| |
|
|||||| |||| ||||| |||||| |||||| || ||||||||||||||||||| ||||| |
|
|
| T |
37826188 |
tgtcaatatttgtaataagcatattccaaacagttaaccaataaacatttcatgaaatatt |
37826248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 45384080 - 45384171
Alignment:
| Q |
169 |
aatcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcatgtg |
261 |
Q |
| |
|
||||||| ||||| ||||||||| ||||| ||||| ||||||||||| || ||||||| ||||| |||||||| || || |||||||||| |
|
|
| T |
45384080 |
aatcacacaaacagagttgtcaatatttc-aataagcatattacaaattgttaaccaatagacattgcatgacatgttcgatcagctcatgtg |
45384171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 636
Target Start/End: Original strand, 45384547 - 45384591
Alignment:
| Q |
592 |
gtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| ||||||||||| || || |||||||||||||||||| |
|
|
| T |
45384547 |
gtccaagacgaatgcactttatattctttcatcacccatatttca |
45384591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 636
Target Start/End: Complemental strand, 47208287 - 47208239
Alignment:
| Q |
588 |
tttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||||||||||||||| || |||||||| || |||||||||| ||||||| |
|
|
| T |
47208287 |
tttagtccaagatgattgtactttgtattctttcatcacccttatttca |
47208239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 47208750 - 47208710
Alignment:
| Q |
175 |
aaaaacaaagttgtcaacatttccaataaacatattacaaa |
215 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||| |||||| |
|
|
| T |
47208750 |
aaaaaccaagttgtcaacatttccaacaaacatactacaaa |
47208710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 549
Target Start/End: Complemental strand, 48899269 - 48899189
Alignment:
| Q |
469 |
ttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaatggggaaaag |
549 |
Q |
| |
|
|||||||| ||||||| ||||||| ||| ||||||||||||||||| || ||||||||| | ||||||||| ||||| |
|
|
| T |
48899269 |
ttgtcatcatacttcaccaatccaaattcaccatctgttccaataatatagccactttttgtacagcacaatgggtaaaag |
48899189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 49058046 - 49058097
Alignment:
| Q |
198 |
caataaacatattacaaacaattgaccaataaacatttcatgacatattacat |
250 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
49058046 |
caataaacatattacaagtgtttgaccaataaaca-ttcatgacatattacat |
49058097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 549
Target Start/End: Original strand, 4030291 - 4030400
Alignment:
| Q |
440 |
aatagaagcgatactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgtataacacaa |
539 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||||| ||||||| |||| |||| || || |||||||||||||||||| ||| ||||| | |||| |
|
|
| T |
4030291 |
aatagcagcgatgctctagcaactgtcctttgtcatcatacttcaccaattcagtaccaccatatgttccaataatatcaccacttattgtagagcacat |
4030390 |
T |
 |
| Q |
540 |
tggggaaaag |
549 |
Q |
| |
|
|||||||||| |
|
|
| T |
4030391 |
tggggaaaag |
4030400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 15349896 - 15349806
Alignment:
| Q |
49 |
gtgtaattgtgattttgatcttgatcaacatgcataaattcatc-aactaaattacaatataaaacaatttcaagcaacgaccagaacata |
138 |
Q |
| |
|
||||||||||||||||||||||| | || ||||| ||| ||||| |||||| |||| ||||||||| ||||||| || |||||| |||||| |
|
|
| T |
15349896 |
gtgtaattgtgattttgatcttgtttaatatgcaaaaactcatcaaactaatttaccatataaaacgatttcaaacagcgaccaaaacata |
15349806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 360
Target Start/End: Original strand, 4029986 - 4030160
Alignment:
| Q |
190 |
aacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattacattagctcatgtgatagtactgattcatgctatacaaatgc |
289 |
Q |
| |
|
||||||| ||||||||||||| |||| ||| | |||||| |||||||||| |||||| ||||||| ||||| | |||||||| || ||||||||| |
|
|
| T |
4029986 |
aacattttcaataaacatattccaaatgattaatcaataaccatttcatgaaatattaaattagctaatgtggca-tactgatt--ggcattacaaatgc |
4030082 |
T |
 |
| Q |
290 |
a-------tgcaaacacatagtactctacagatgcagccactgaagagttcatagtacagtataaatatcaagaaaat |
360 |
Q |
| |
|
| | |||||||||||||| ||||| ||||| || | ||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
4030083 |
attcaaagttcaaacacatagtaccctacaaatgcaaccgcccaagagttcataatacaatataattatcaagaaaat |
4030160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 29697246 - 29697149
Alignment:
| Q |
59 |
gattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgaccaga-acatacattagaacccaatcca |
155 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| || | |||||||||||||| ||||||||| ||||||||| | ||||||||||||| ||||||| |
|
|
| T |
29697246 |
gattttgatattgatcaacatgcataagatcataaaatcaattacaatataaaccaatttcaaccaacgaccacagacatacattagaatacaatcca |
29697149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 258
Target Start/End: Complemental strand, 29689130 - 29688921
Alignment:
| Q |
59 |
gattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagcaacgacca-gaacatacattagaacccaatccagt |
157 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||| || | |||||||||||||| ||||||||| || ||||| ||||| ||||||||| ||||||| |
|
|
| T |
29689130 |
gattttgatattgatcaacattcataagatcataaaatcaattacaatataaaccaatttcaaataatgaccacaaacatgcattagaacgcaatccata |
29689031 |
T |
 |
| Q |
158 |
tgcacatacata---------atcacaaaaacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatattac |
248 |
Q |
| |
|
| ||| ||| | |||| | |||||||| |||||||||| ||||||||| | |||||| |||||||||||||||||||||||||||| | |
|
|
| T |
29689030 |
tacacgcacaaacaacattgcatcatagaaacaaagcagtcaacattttcaataaacacaatacaaatgtttgaccaataaacatttcatgacatatttc |
29688931 |
T |
 |
| Q |
249 |
attagctcat |
258 |
Q |
| |
|
|| ||||||| |
|
|
| T |
29688930 |
atcagctcat |
29688921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 29711593 - 29711651
Alignment:
| Q |
59 |
gattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||| |
|
|
| T |
29711593 |
gattttgatcttgatcaacatgcataaactcatcaaatcaatgaaaatataaaacaatt |
29711651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 632
Target Start/End: Original strand, 42561985 - 42562028
Alignment:
| Q |
589 |
ttagtccaagatgaatgcactttgtactccttcatcacccatat |
632 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
42561985 |
ttagtccaagatgaatgcactttgtattctttcatcacccatat |
42562028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 636
Target Start/End: Complemental strand, 179462 - 179420
Alignment:
| Q |
594 |
ccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
179462 |
ccaagatgaatgcactttgtattctttcatcacccatatttca |
179420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 636
Target Start/End: Complemental strand, 9120191 - 9120125
Alignment:
| Q |
570 |
aatagacagaccatgagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| | || ||||||| ||||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
9120191 |
aatagacaaaacaagagttttcttccaagaggaatgcactttgtattctttcatcacccatatttca |
9120125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 9120740 - 9120673
Alignment:
| Q |
58 |
tgattttgatcttgatcaacatgcataaattcatca-actaaattacaatataaaacaatttcaagca |
124 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||| | ||||| |||| | |||||||||||||||||| |
|
|
| T |
9120740 |
tgattttgatcttgattgacatgcataaactcatgagactaatttaccaaataaaacaatttcaagca |
9120673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 29697001 - 29696896
Alignment:
| Q |
293 |
caaacacatagtactctacagatgcagccactgaagagttcatagtacagtataaatatcaagaaaatgaa--tggtgaagaagaatattccacaacctc |
390 |
Q |
| |
|
|||||| ||| ||| ||||| ||||||| ||| |||||| |||| |||| ||||| ||| |||| ||||| ||||||||||||||| | || |||||| |
|
|
| T |
29697001 |
caaacatatattaccctacaaatgcagctactcaagagtccataatacaatataattataaagatcatgaaaatggtgaagaagaatacttcaaaacctc |
29696902 |
T |
 |
| Q |
391 |
attctt |
396 |
Q |
| |
|
|||||| |
|
|
| T |
29696901 |
attctt |
29696896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 21017393 - 21017301
Alignment:
| Q |
20 |
tttctaatgaagtgctttaaataagagaagtgtaattgtgattttgatcttgatcaacatgcataaattcatcaactaaattacaatataaaa |
112 |
Q |
| |
|
||||||||||||| ||| || |||| ||||| |||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
21017393 |
tttctaatgaagtaatttgaactagagtcgtgtatttgtgattttgatctttagtaacatgcataaactcatcaaataaattacaatataaaa |
21017301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 14197230 - 14197288
Alignment:
| Q |
66 |
atcttgatcaacatgcataaattcatcaactaaattacaatataaaacaatttcaagca |
124 |
Q |
| |
|
|||||||| |||||||||||| ||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
14197230 |
atcttgatgaacatgcataaactcatcaaattaattacaatataaaacaattttaagca |
14197288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 631
Target Start/End: Original strand, 14197337 - 14197377
Alignment:
| Q |
591 |
agtccaagatgaatgcactttgtactccttcatcacccata |
631 |
Q |
| |
|
||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
14197337 |
agtccaagatgaatgcattttgtattctttcatcacccata |
14197377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 21016235 - 21016183
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| || ||||| |||||||||||| |
|
|
| T |
21016235 |
gagtcttagtccaagacgaatgtactttgtattctttcataacccatatttca |
21016183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 47451411 - 47451494
Alignment:
| Q |
448 |
cgatactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcaccgctttttgta |
531 |
Q |
| |
|
|||| ||||| || |||||||||||||| ||||| | |||||| || |||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
47451411 |
cgatgctctaacaactgtcctttgtcattatacttaaccaatccggtatcatcatctgttccaataatatcaccactttttgta |
47451494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 11004985 - 11005034
Alignment:
| Q |
50 |
tgtaattgtgattttgatcttgatcaacatgcataaattcatcaactaaa |
99 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
11004985 |
tgtaattatgattttgatcttgatcaacatgcaaaaactcatcaaataaa |
11005034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 636
Target Start/End: Original strand, 11024150 - 11024202
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| || ||||| |||||||||||| |
|
|
| T |
11024150 |
gagtcttagtccaagacgaatgcactttgtattctttcataacccatatttca |
11024202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 589 - 636
Target Start/End: Original strand, 11005580 - 11005627
Alignment:
| Q |
589 |
ttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
||||||||||| |||||||||||||| || ||||| |||||||||||| |
|
|
| T |
11005580 |
ttagtccaagacgaatgcactttgtattctttcataacccatatttca |
11005627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 636
Target Start/End: Original strand, 11015138 - 11015190
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatatttca |
636 |
Q |
| |
|
|||||||| |||||| |||||||||||||| || ||||| |||||||||||| |
|
|
| T |
11015138 |
gagttttaacccaagacgaatgcactttgtattctttcataacccatatttca |
11015190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 24381927 - 24381868
Alignment:
| Q |
184 |
gttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacat |
243 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| | || |||||||||||||||||||||| |
|
|
| T |
24381927 |
gttgtcaatatttccaataaacatgttacaaatagttaaccaataaacatttcatgacat |
24381868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 24368064 - 24368006
Alignment:
| Q |
64 |
tgatcttgatcaacatgcataaattcatc-aactaaattacaatataaaacaatttcaa |
121 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
24368064 |
tgatcttgatcaacatggataaactcatcaaactaatttaccatataaaacaatttcaa |
24368006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 632
Target Start/End: Complemental strand, 24416192 - 24416144
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatat |
632 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| || |||||||||||||| |
|
|
| T |
24416192 |
gagttttagtccaagatgactgccctttgtattctttcatcacccatat |
24416144 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 24341262 - 24341224
Alignment:
| Q |
177 |
aaacaaagttgtcaacatttccaataaacatattacaaa |
215 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
24341262 |
aaacaaagttgttaatatttccaataaacatattacaaa |
24341224 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 24353627 - 24353589
Alignment:
| Q |
177 |
aaacaaagttgtcaacatttccaataaacatattacaaa |
215 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
24353627 |
aaacaaagttgttaatatttccaataaacatattacaaa |
24353589 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 24323184 - 24323139
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcaccca |
629 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| || ||||||||||| |
|
|
| T |
24323184 |
gagttttagtcgaagatgactgcactttgtattctttcatcaccca |
24323139 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 632
Target Start/End: Complemental strand, 24310630 - 24310582
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatat |
632 |
Q |
| |
|
|||||||| ||||||| || ||||||||||| || |||||||||||||| |
|
|
| T |
24310630 |
gagttttactccaagaagactgcactttgtattctttcatcacccatat |
24310582 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 632
Target Start/End: Complemental strand, 24367579 - 24367531
Alignment:
| Q |
584 |
gagttttagtccaagatgaatgcactttgtactccttcatcacccatat |
632 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || | ||| |||||||| |
|
|
| T |
24367579 |
gagttttagtccaagacgaatgcactttgtattcttccattacccatat |
24367531 |
T |
 |
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Target: chr2 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 29351178 - 29351111
Alignment:
| Q |
293 |
caaacacatagtactctacagatgcagccactgaagagttcatagtacagtataaatatcaagaaaat |
360 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||| ||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
29351178 |
caaacacatagtaccctacaaatgcaaccacccaagagttcataatacaatataattatcaagaaaat |
29351111 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 29350980 - 29350899
Alignment:
| Q |
440 |
aatagaagcgatactctagcagctgtcctttgtcatcgtacttcatcaatccagtgtcatgatctgttccaataatatcacc |
521 |
Q |
| |
|
||||| |||||| |||||||| |||||||||||||| ||||||| |||| |||| || ||| ||||||||||||||||| |
|
|
| T |
29350980 |
aatagcagcgatgctctagcaactgtcctttgtcataatacttcaccaattcagtaccaccatccgttccaataatatcacc |
29350899 |
T |
 |
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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 29351251 - 29351214
Alignment:
| Q |
224 |
caataaacatttcatgacatattacattagctcatgtg |
261 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29351251 |
caataatcatttcatgacatattacattagctcatgtg |
29351214 |
T |
 |
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Target: chr7 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 48884720 - 48884652
Alignment:
| Q |
178 |
aacaaagttgtcaacatttccaataaacatattacaaacaattgaccaataaacatttcatgacatatt |
246 |
Q |
| |
|
||||||| |||||| ||||||||||| || |||| ||| |||| |||| ||||||||||||| |||||| |
|
|
| T |
48884720 |
aacaaagctgtcaatatttccaataaccaaattaaaaataattaaccactaaacatttcatgtcatatt |
48884652 |
T |
 |
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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 48884615 - 48884563
Alignment:
| Q |
284 |
aaatgcatgcaaacacatagtactctacagatgcagccactgaagagttcata |
336 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
48884615 |
aaatgcagtcaaacacatattactctacaaatgcagccaccaaagagttcata |
48884563 |
T |
 |
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