View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2539_low_4 (Length: 369)

Name: NF2539_low_4
Description: NF2539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2539_low_4
NF2539_low_4
[»] chr2 (37 HSPs)
chr2 (76-369)||(12795855-12796144)
chr2 (76-154)||(27317453-27317531)
chr2 (62-153)||(30331811-30331902)
chr2 (58-151)||(42419849-42419942)
chr2 (62-158)||(23974407-23974503)
chr2 (78-157)||(2142730-2142809)
chr2 (76-154)||(4606999-4607077)
chr2 (104-157)||(18179051-18179104)
chr2 (69-154)||(31744365-31744450)
chr2 (85-146)||(39073628-39073689)
chr2 (90-152)||(40682312-40682377)
chr2 (91-153)||(3312166-3312228)
chr2 (104-154)||(10619138-10619188)
chr2 (123-156)||(6561458-6561491)
chr2 (93-153)||(449938-449998)
chr2 (106-146)||(2416417-2416457)
chr2 (90-154)||(15305762-15305826)
chr2 (62-154)||(26202088-26202180)
chr2 (79-151)||(44590101-44590173)
chr2 (79-157)||(8017510-8017589)
chr2 (94-141)||(12464404-12464451)
chr2 (62-153)||(24100988-24101079)
chr2 (91-154)||(42659129-42659192)
chr2 (115-153)||(18525160-18525198)
chr2 (94-154)||(15370241-15370302)
chr2 (115-152)||(40059381-40059418)
chr2 (115-152)||(40085281-40085318)
chr2 (85-158)||(43036639-43036712)
chr2 (124-157)||(43529773-43529806)
chr2 (115-168)||(44438745-44438798)
chr2 (79-151)||(1633421-1633493)
chr2 (114-154)||(1830151-1830191)
chr2 (96-143)||(14277822-14277870)
chr2 (90-138)||(19608567-19608615)
chr2 (126-158)||(21279963-21279995)
chr2 (78-153)||(22878173-22878249)
chr2 (94-146)||(31561668-31561720)
[»] chr5 (27 HSPs)
chr5 (71-153)||(39594876-39594958)
chr5 (62-152)||(9107150-9107240)
chr5 (62-154)||(10640013-10640105)
chr5 (85-146)||(11064749-11064810)
chr5 (79-158)||(32941546-32941626)
chr5 (90-145)||(12425661-12425716)
chr5 (62-141)||(15015904-15015982)
chr5 (94-153)||(41419411-41419470)
chr5 (94-153)||(41534530-41534589)
chr5 (80-154)||(6521156-6521230)
chr5 (62-154)||(16937801-16937893)
chr5 (90-138)||(19460260-19460308)
chr5 (76-151)||(7674721-7674796)
chr5 (79-154)||(32010022-32010097)
chr5 (90-153)||(34736446-34736509)
chr5 (104-141)||(35445775-35445812)
chr5 (76-140)||(15246907-15246971)
chr5 (113-161)||(32197844-32197892)
chr5 (44-154)||(7705916-7706029)
chr5 (91-154)||(12433091-12433154)
chr5 (95-145)||(40426858-40426908)
chr5 (69-119)||(42228106-42228156)
chr5 (77-158)||(37112192-37112273)
chr5 (116-157)||(40111382-40111423)
chr5 (62-159)||(42500156-42500252)
chr5 (97-154)||(42568948-42569005)
chr5 (114-158)||(14331478-14331522)
[»] chr7 (35 HSPs)
chr7 (62-154)||(19302481-19302573)
chr7 (62-154)||(4970710-4970802)
chr7 (98-154)||(44822054-44822110)
chr7 (90-153)||(22296147-22296210)
chr7 (91-158)||(33266400-33266467)
chr7 (62-130)||(19022527-19022595)
chr7 (62-165)||(45593588-45593692)
chr7 (79-146)||(48470121-48470188)
chr7 (91-151)||(9210910-9210970)
chr7 (104-156)||(34036019-34036071)
chr7 (62-154)||(34744088-34744180)
chr7 (85-140)||(18765367-18765422)
chr7 (90-141)||(46280211-46280262)
chr7 (97-155)||(31744897-31744955)
chr7 (80-158)||(37064382-37064460)
chr7 (62-119)||(19214359-19214416)
chr7 (105-157)||(41040267-41040320)
chr7 (113-153)||(24048651-24048691)
chr7 (79-158)||(20526523-20526602)
chr7 (90-153)||(22283565-22283628)
chr7 (90-149)||(43694491-43694550)
chr7 (76-158)||(11782957-11783039)
chr7 (76-154)||(18962501-18962579)
chr7 (115-153)||(44917445-44917483)
chr7 (90-152)||(49019957-49020019)
chr7 (78-154)||(30748952-30749029)
chr7 (125-154)||(32157085-32157114)
chr7 (90-151)||(45338541-45338602)
chr7 (62-158)||(11619072-11619168)
chr7 (90-154)||(20234548-20234612)
chr7 (94-154)||(25596124-25596184)
chr7 (125-157)||(28691751-28691783)
chr7 (116-156)||(30134246-30134286)
chr7 (94-154)||(33128843-33128903)
chr7 (115-159)||(47046021-47046065)
[»] chr1 (26 HSPs)
chr1 (62-154)||(2295156-2295248)
chr1 (90-153)||(6102241-6102304)
chr1 (76-153)||(50644174-50644251)
chr1 (62-146)||(49938807-49938891)
chr1 (85-156)||(33204310-33204381)
chr1 (79-141)||(38001672-38001734)
chr1 (76-155)||(3233932-3234011)
chr1 (91-152)||(24334284-24334345)
chr1 (77-153)||(46504137-46504214)
chr1 (77-137)||(39658444-39658504)
chr1 (85-144)||(39976138-39976197)
chr1 (76-142)||(36514606-36514672)
chr1 (91-153)||(37617384-37617446)
chr1 (99-140)||(7028399-7028440)
chr1 (115-151)||(17009503-17009539)
chr1 (90-158)||(34952290-34952358)
chr1 (91-153)||(6292580-6292643)
chr1 (69-152)||(15943027-15943110)
chr1 (91-146)||(38116003-38116058)
chr1 (90-151)||(40413943-40414005)
chr1 (123-156)||(30013995-30014028)
chr1 (114-151)||(34303178-34303215)
chr1 (96-152)||(1510230-1510286)
chr1 (104-156)||(7244570-7244622)
chr1 (95-143)||(15784410-15784458)
chr1 (122-158)||(29793877-29793913)
[»] chr4 (39 HSPs)
chr4 (76-156)||(52315113-52315193)
chr4 (62-154)||(21731574-21731666)
chr4 (91-158)||(27043744-27043811)
chr4 (62-145)||(29657444-29657527)
chr4 (76-154)||(55437150-55437228)
chr4 (92-152)||(15173223-15173283)
chr4 (62-154)||(54426103-54426195)
chr4 (91-154)||(39691067-39691130)
chr4 (79-146)||(40174634-40174701)
chr4 (90-153)||(41336848-41336911)
chr4 (93-151)||(43506026-43506084)
chr4 (62-154)||(17822783-17822875)
chr4 (90-154)||(29388702-29388766)
chr4 (90-158)||(35571545-35571613)
chr4 (123-158)||(679412-679447)
chr4 (91-158)||(2244140-2244207)
chr4 (79-154)||(49940085-49940160)
chr4 (114-156)||(41433487-41433529)
chr4 (79-168)||(25571336-25571425)
chr4 (65-154)||(27329994-27330083)
chr4 (90-154)||(8705029-8705093)
chr4 (90-158)||(13126490-13126558)
chr4 (94-154)||(44797972-44798032)
chr4 (123-158)||(7367968-7368003)
chr4 (90-153)||(24169351-24169414)
chr4 (107-154)||(42403941-42403988)
chr4 (91-137)||(1706711-1706757)
chr4 (92-153)||(6987660-6987722)
chr4 (79-145)||(25904150-25904216)
chr4 (91-153)||(44862903-44862965)
chr4 (91-151)||(19305014-19305075)
chr4 (62-151)||(22030263-22030352)
chr4 (85-154)||(29774323-29774392)
chr4 (120-153)||(40613289-40613322)
chr4 (118-158)||(1133044-1133084)
chr4 (90-154)||(18815111-18815175)
chr4 (114-154)||(22662169-22662209)
chr4 (114-154)||(22666648-22666688)
chr4 (114-158)||(26590636-26590680)
[»] chr3 (36 HSPs)
chr3 (97-156)||(25447161-25447220)
chr3 (62-154)||(20257596-20257689)
chr3 (79-156)||(21367744-21367821)
chr3 (79-152)||(24085258-24085331)
chr3 (114-159)||(30657398-30657443)
chr3 (62-146)||(31365114-31365198)
chr3 (79-154)||(402460-402535)
chr3 (90-153)||(26990144-26990207)
chr3 (104-146)||(33405118-33405160)
chr3 (76-154)||(42747700-42747778)
chr3 (79-140)||(18405763-18405824)
chr3 (110-151)||(26911699-26911740)
chr3 (90-143)||(36783281-36783334)
chr3 (106-154)||(16072959-16073007)
chr3 (62-146)||(31365235-31365319)
chr3 (79-154)||(42799884-42799960)
chr3 (97-157)||(50946201-50946261)
chr3 (122-153)||(28779439-28779470)
chr3 (93-157)||(36507007-36507073)
chr3 (79-158)||(39980806-39980885)
chr3 (123-158)||(43875587-43875622)
chr3 (117-163)||(31615469-31615515)
chr3 (76-130)||(37389257-37389311)
chr3 (91-152)||(584135-584196)
chr3 (97-154)||(20170632-20170689)
chr3 (90-153)||(32582828-32582888)
chr3 (108-153)||(33046717-33046762)
chr3 (108-153)||(34610725-34610770)
chr3 (62-146)||(22892-22976)
chr3 (90-146)||(9832681-9832737)
chr3 (123-155)||(11253622-11253654)
chr3 (65-153)||(24684741-24684829)
chr3 (90-154)||(26878288-26878352)
chr3 (118-158)||(32663754-32663794)
chr3 (126-158)||(47903994-47904026)
chr3 (90-154)||(53493843-53493907)
[»] chr8 (39 HSPs)
chr8 (85-153)||(1096573-1096641)
chr8 (90-154)||(38602415-38602479)
chr8 (76-163)||(32840895-32840982)
chr8 (90-160)||(36963266-36963336)
chr8 (85-153)||(1074187-1074255)
chr8 (90-154)||(30251372-30251436)
chr8 (90-152)||(1057997-1058059)
chr8 (77-146)||(6950396-6950466)
chr8 (62-140)||(26771325-26771403)
chr8 (90-160)||(42893402-42893472)
chr8 (85-158)||(26215542-26215615)
chr8 (64-161)||(35534524-35534621)
chr8 (79-151)||(43717855-43717927)
chr8 (62-153)||(10758176-10758267)
chr8 (91-142)||(27028920-27028971)
chr8 (79-146)||(38648428-38648495)
chr8 (76-153)||(2487927-2488005)
chr8 (104-154)||(15247695-15247745)
chr8 (94-158)||(922320-922385)
chr8 (85-146)||(6525900-6525961)
chr8 (78-154)||(14280339-14280416)
chr8 (104-157)||(18930797-18930850)
chr8 (114-154)||(7008710-7008750)
chr8 (89-153)||(30657696-30657760)
chr8 (96-158)||(1892138-1892201)
chr8 (123-158)||(10727465-10727500)
chr8 (79-121)||(6882004-6882046)
chr8 (104-154)||(15180641-15180691)
chr8 (62-120)||(28763428-28763486)
chr8 (123-161)||(40357049-40357087)
chr8 (114-156)||(41336556-41336598)
chr8 (90-151)||(12496993-12497054)
chr8 (90-154)||(900629-900693)
chr8 (90-130)||(1930123-1930163)
chr8 (98-154)||(8407738-8407794)
chr8 (102-146)||(16915833-16915877)
chr8 (90-158)||(18591890-18591958)
chr8 (102-154)||(32213219-32213271)
chr8 (76-151)||(39551130-39551206)
[»] chr6 (17 HSPs)
chr6 (90-165)||(21405061-21405136)
chr6 (62-158)||(31623610-31623706)
chr6 (76-158)||(10645299-10645381)
chr6 (85-154)||(34404644-34404713)
chr6 (98-157)||(7351586-7351646)
chr6 (62-154)||(34430775-34430866)
chr6 (91-154)||(34910327-34910390)
chr6 (99-154)||(35069530-35069585)
chr6 (90-140)||(2455076-2455126)
chr6 (113-159)||(30536878-30536924)
chr6 (104-146)||(32729069-32729111)
chr6 (90-154)||(848077-848140)
chr6 (114-150)||(2455922-2455958)
chr6 (114-154)||(2457053-2457093)
chr6 (130-158)||(6310166-6310194)
chr6 (90-154)||(24982793-24982857)
chr6 (76-151)||(26559160-26559236)
[»] scaffold0110 (1 HSPs)
scaffold0110 (92-153)||(33832-33893)


Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 76 - 369
Target Start/End: Original strand, 12795855 - 12796144
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccccaagactaacggtagtg 175  Q
    |||||||| |||||||||||||||||  ||||||||||||||     ||||||| ||| |||||||||||| |||||||||||||||||| || |||| |    
T  12795855 agttgttttcatacgttctcccaaactgtctcacaaaactta----cgtagatagactaaaataagtcaatccaaacagaccccaagactgacagtagcg 12795950  T
Q  176 gctggatatctatttccttcgtagtattgttggcccaacatcctacaaaagaaataagaaatccaactgctaccatgagtcagcagtactgtaacccaaa 275  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12795951 gctggatatctatttccttggtagtattgttggcccaacatcctaccaaagaaatacgaaatccaactgctaccatgagtcagcagtactgtaacccaaa 12796050  T
Q  276 ttgcagatagaagctctcaagctgaactggagatgaatgatcatagtacaaagaaacaaagtcaagcagtttcaaatagagcaaataatatgaa 369  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  12796051 ttgcagatggaagctctcaagctgaactggagatgaatgatcatagcacaaagaaacaaagtcaagcagtttcaaatagagcaactaatatgaa 12796144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 27317453 - 27317531
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| |||| |||||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  27317453 agttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacag 27317531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 30331811 - 30331902
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||| | || | ||| |||| ||||||||||||| |||||||||||||||||| |||||||| || |||||||||||| ||||||    
T  30331811 tgaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaaca 30331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 42419849 - 42419942
Alignment:
Q  58 aagctgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||||| |||| | || ||||| | || ||||||||||||| ||||| |||||||||||| | |||||||||||||||||||||| ||||    
T  42419849 aagctgaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 23974503 - 23974407
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||| | || ||||| |||| ||||||| |||||||||||| || || ||||| |||||||||| ||||||||||||| |||||| ||||    
T  23974503 tgaaaattgtcataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataagtcaatccaaacataccc 23974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 2142730 - 2142809
Alignment:
Q  78 ttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||| |||| ||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||  ||||||||||    
T  2142730 ttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaacagacc 2142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 4606999 - 4607077
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| || | ||||||||||| | ||||||||||||||| | ||||||||| |||||||||| |||| |||||||    
T  4606999 agttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaacag 4607077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 18179051 - 18179104
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  18179051 tctcacaaaacttatgttagtagataagctcaaataagtcaatccaaacagacc 18179104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 31744365 - 31744450
Alignment:
Q  69 tgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| || ||||| || | |||||| |||||| ||||| ||||||||||||||||||||| | |||||||| |||| |||||||    
T  31744365 tgtcttaagctgttttcaaaagttctctcaaacagtctcagaaaacttatgtcggtagataagcccaaataagccaatccaaacag 31744450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 39073689 - 39073628
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||| ||||||||||| |||||    
T  39073689 cataagttcttccaaacagtctcacaaaaattatgtcggtagatgaactcaaataaatcaat 39073628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 40682377 - 40682312
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtc---ggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||||||||||||||||||||||||||||    ||||| ||||||||||||| |||| |||||    
T  40682377 gttctcccaaacaatctcacaaaacttatgtcagtagtagacaaactcaaataagccaatccaaac 40682312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 3312166 - 3312228
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||| |||| |||||||||||||| ||| |||||||| |||||||||| |||| ||||||    
T  3312166 ttctccccaacagtctcacaaaacttacgtcagtagataagctcaaataagccaatccaaaca 3312228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 10619188 - 10619138
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||| |||| |||||||||||||||| ||||||| |||||||    
T  10619188 tctcacaaaacttgtgtcagtagataaactcaaatgagtcaatccaaacag 10619138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 6561458 - 6561491
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagac 156  Q
    ||||||||||||||||||||||||||||||||||    
T  6561458 gtagataaactcaaataagtcaattcaaacagac 6561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 449938 - 449998
Alignment:
Q  93 ctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||| ||||||||||   |||||||| ||||||||||| ||| ||||||    
T  449938 ctcccaaacaatctcataaaacttatgctagtagataagctcaaataagttaatgcaaaca 449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 2416417 - 2416457
Alignment:
Q  106 tcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  2416417 tcacaaaacttatgttagtagataaactcaaataagtcaat 2416457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 15305762 - 15305826
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| ||||||| | ||||||||||||||||  ||||||| |||||||||| |||| |||||||    
T  15305762 gttctaccaaacagtttcacaaaacttatgtcaatagataagctcaaataagccaatccaaacag 15305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 26202088 - 26202180
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | |||||||  ||||  ||||  |||| |||||||||||||||||||| | ||||||  |||||||||| ||| |||||||    
T  26202088 tgaaaattgtcataagttgttctcataaattctagcaaagaatctcacaaaacttatgtcagcagataagttcaaataagttaatccaaacag 26202180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 44590101 - 44590173
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||| |||| |||||  |||||  ||||||||||||||||||  |||||||||||||||||| |||| ||||    
T  44590101 tgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaataagccaatccaaa 44590173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 8017510 - 8017589
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    ||||| |||| ||||||||||| |||| |||||   ||||||||  ||||||| ||||||||||||||| ||||||||||    
T  8017510 tgttttcataagttctcccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatccaaacagacc 8017589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 12464451 - 12464404
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataag 141  Q
    ||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  12464451 tcccaaacattctcacaaaacttatgttagtagatacactcaaataag 12464404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 24100988 - 24101079
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||| |||||| | || ||||| |||| ||||||||||||| ||||||||||||||||    || ||||  ||||||||||| |||||||||    
T  24100988 tgaatattgtcataaggtgtttccataagttctcccaaacagtctcacaaaacttatgataatatataagttcaaataagtcgattcaaaca 24101079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 42659192 - 42659129
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||| |||||||||||||||| | ||| |||| |||||||||| |||  |||||||    
T  42659192 ttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataagccaacccaaacag 42659129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 18525198 - 18525160
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  18525198 ttatgtctgtagataagctcaaataagtcaattcaaaca 18525160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 15370302 - 15370241
Alignment:
Q  94 tcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||| |||||||||  |||||| | |||||||| ||||||||||||||| |||||||    
T  15370302 tcccaaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacag 15370241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 40059418 - 40059381
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaac 40059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 40085318 - 40085281
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaac 40085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 43036639 - 43036712
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| ||| ||||||| | |||||||||||||||||   ||||||| |||||||||  |||| |||||||||||    
T  43036639 cataagttttcccaaatactctcacaaaacttatgtaactagataagctcaaataatccaatacaaacagaccc 43036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 43529806 - 43529773
Alignment:
Q  124 tagataaactcaaataagtcaattcaaacagacc 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  43529806 tagataagctcaaataagtcaattcaaacagacc 43529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 44438798 - 44438745
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaacagaccccaagactaac 168  Q
    ||||||| |||||||| ||||||| ||||||||||||||| ||| |||| ||||    
T  44438798 ttatgtctgtagataagctcaaatcagtcaattcaaacaggccctaagattaac 44438745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 1633493 - 1633421
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||| |||| |||||||| |||| | | ||||||||||||   |||||||||||||||||||| ||| ||||    
T  1633493 tgttttcataagttctccctaacagtataacaaaacttatgctagtagataaactcaaataagtaaatccaaa 1633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 1830151 - 1830191
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  1830151 cttatgtcagtaaataaactcaaataagtcaatccaaacag 1830191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 14277870 - 14277822
Alignment:
Q  96 ccaaacaatctcacaaa-acttatgtcggtagataaactcaaataagtc 143  Q
    ||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  14277870 ccaaacactctcacaagtacttatgtccgtagataaactcaaataagtc 14277822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 19608615 - 19608567
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaat 138  Q
    |||||| |||||| ||||| ||||| |||||| ||||||||||||||||    
T  19608615 gttctcgcaaacagtctcataaaacctatgtcagtagataaactcaaat 19608567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 21279995 - 21279963
Alignment:
Q  126 gataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||||||||||||||||||| ||||    
T  21279995 gataaactcaaataagtcaattcaaacaaaccc 21279963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 22878173 - 22878249
Alignment:
Q  78 ttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||| |||| | ||||||||||| ||||||||   |||||||| || ||||| ||||||||||||||| ||||||    
T  22878173 ttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 31561720 - 31561668
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||||||| | | |||||||||||||  |||||||| |||||||||||||||    
T  31561720 tcccaaacagttttacaaaacttatgttagtagataatctcaaataagtcaat 31561668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 39594876 - 39594958
Alignment:
Q  71 tcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||| ||||| |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  39594876 tcttcagctgttttcataagttgtcccaaacaatctaacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 39594958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 9107150 - 9107240
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||||||| | || ||||| |||  ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  9107150 tgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 10640013 - 10640105
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||| | || ||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||  ||| |||||||    
T  10640013 tgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataagctaatccaaacag 10640105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 11064749 - 11064810
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  11064749 cataagttctctcaaacaatctcacaaaacttatgttggtagataaactcaaataaatcaat 11064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 32941546 - 32941626
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaa-ctcaaataagtcaattcaaacagaccc 158  Q
    ||||| |||| ||||||||||||  ||||||| |||||||||| ||||||||| ||| ||||||||||| |||||||||||    
T  32941546 tgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataagtcaatccaaacagaccc 32941626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 12425661 - 12425716
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaa 145  Q
    ||||||||||||| |||||||||||||||| | |||||||| ||||||||||||||    
T  12425661 gttctcccaaacagtctcacaaaacttatgacagtagataagctcaaataagtcaa 12425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 15015904 - 15015982
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataag 141  Q
    ||||||||||||||| |  ||| |||| ||||||||||||| ||||||||| |||||||| |||||||| ||||||||||    
T  15015904 tgaaaattgtcttcaatatttt-cataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 41419411 - 41419470
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  41419411 tcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 41534530 - 41534589
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  41534530 tcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 6521156 - 6521230
Alignment:
Q  80 gtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| | | ||| ||||||||||| |||||||    
T  6521156 gttttcataagttctcccaaacaatctcacaaaacatatgtcagtagttcagctctaataagtcaatccaaacag 6521230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 16937893 - 16937801
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| ||||| | || ||||| |||| ||||| ||||||| ||||||||||||||||   |||||||| |||||||||| |||| |||||||    
T  16937893 tgaaatttgtcataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaacag 16937801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 19460308 - 19460260
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaat 138  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  19460308 gttctcccaaacaatctcactaaacttatgccagtagataaactcaaat 19460260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 7674721 - 7674796
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||| |||| ||||| |||| || |||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  7674721 agttgtttccataagttcttccaagcagtctcacaaaacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 32010022 - 32010097
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| |||| |||||| |||||| ||| |  ||||||||||  |||||||||||||||||||||||| |||||||    
T  32010022 tgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 32010097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 34736509 - 34736446
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||  ||||||||||||||||||   |||||| ||||||||||||||| ||||||    
T  34736509 gttctcccaaactgtctcacaaaacttatgtcaccagataagctcaaataagtcaatccaaaca 34736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 35445812 - 35445775
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataag 141  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35445812 tctcacaaaacttatgtcagtagataaactcaaataag 35445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 15246907 - 15246971
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||| || |||| ||||||||||||| ||| | |||||||||||| |||||||| |||||||||    
T  15246907 agttgctttcataagttctcccaaacattctaataaaacttatgtcagtagataagctcaaataa 15246971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 32197844 - 32197892
Alignment:
Q  113 acttatgtcggtagataaactcaaataagtcaattcaaacagaccccaa 161  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||| ||||    
T  32197844 acttatgtcagtagataaactcaaaaaagtcaatccaaacagactccaa 32197892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 7706029 - 7705916
Alignment:
Q  44 aaataagccgataaaagc---tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||||||||| ||||||   |||||| |||| | || ||||| |||| ||||||||||| |   ||||||||||||||   |||||||  |||||||||    
T  7706029 aaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataa 7705930  T
Q  141 gtcaattcaaacag 154  Q
    |||||| |||||||    
T  7705929 gtcaatccaaacag 7705916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 12433154 - 12433091
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||||||||||||||| |||| | ||| ||||  ||||||||| |||| |||||||    
T  12433154 ttctcccaaacaatctcacaaaacctatgccagtaaataagttcaaataagccaatccaaacag 12433091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 40426858 - 40426908
Alignment:
Q  95 cccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaa 145  Q
    |||||||| |||||||||| |||||||  ||||||| ||||||||||||||    
T  40426858 cccaaacagtctcacaaaatttatgtcattagataagctcaaataagtcaa 40426908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 42228106 - 42228156
Alignment:
Q  69 tgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatg 119  Q
    |||||| || ||||| |||| |||||||||||||||||||| |||||||||    
T  42228106 tgtcttaagctgtttccataagttctcccaaacaatctcacgaaacttatg 42228156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 37112273 - 37112192
Alignment:
Q  77 gttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||| ||||  ||||||| |||| |||||| ||  ||||||| || || || |||||||||||| ||||||||||||||    
T  37112273 gttgttttcataaattctccctaacagtctcacgaatattatgtcagtggaaaagctcaaataagtcgattcaaacagaccc 37112192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 40111382 - 40111423
Alignment:
Q  116 tatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  40111382 tatgtcagtagataaactcaaataagtcaatcgaaacagacc 40111423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 42500252 - 42500156
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacccc 159  Q
    ||||||||||| | |||||||| |||| ||||||| ||| | |||||||||||||||||| |||| |||   |||||||  |||| ||||||| ||||    
T  42500252 tgaaaattgtcgtaagttgtttccataagttctcc-aaagagtctcacaaaacttatgtcagtaggtaagtccaaataaaccaatccaaacaggcccc 42500156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 42569005 - 42568948
Alignment:
Q  97 caaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||||| ||||||||||  ||  |||||||||||||||||||| |||||||    
T  42569005 caaacagtctcacgaaacttatgttagtgcataaactcaaataagtcaatccaaacag 42568948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 14331478 - 14331522
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||    
T  14331478 cttatgacagtagataagctcaaataagtcaatccaaacagaccc 14331522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 19302573 - 19302481
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | || ||||| ||||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19302573 tgaaaattgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaacag 19302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 4970802 - 4970710
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||| | | |||||||| |||| ||||||||||||| |||||||| |||||||||   |||||| ||||||||||||||| |||||||    
T  4970802 tgaaaattgccataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaacag 4970710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 44822054 - 44822110
Alignment:
Q  98 aaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  44822054 aaacaatctcacaaaacttatgtcagcagataaactcaaataagtcaatccaaacag 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 22296210 - 22296147
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||||    
T  22296210 gttctcccaaacaatctcacagaacttatgtcaccggataaactcaaataagtcaattcaaaca 22296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 33266467 - 33266400
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  33266467 ttctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacataccc 33266400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 19022595 - 19022527
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataa 130  Q
    ||||||||||| | |||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||||    
T  19022595 tgaaaattgtcataagttgttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 45593588 - 45593692
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggt-agataaactcaaataagtcaattcaaacagacccca 160  Q
    |||||| |||| |||| |||||  ||| ||||||||||||| ||||||||| |||||||| || | ||||||||||||||| |||| ||||||| || ||    
T  45593588 tgaaaaatgtcatcagatgtttttataagttctcccaaacagtctcacaaagcttatgtcagtaatataaactcaaataagccaatccaaacaggcctca 45593687  T
Q  161 agact 165  Q
    |||||    
T  45593688 agact 45593692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 48470121 - 48470188
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||  ||||||| |||||||||| ||||    
T  48470121 tgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataagccaat 48470188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 9210910 - 9210970
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||||||| ||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  9210910 ttctcccaaacagtctcagaaaacttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 34036019 - 34036071
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||||| || |||||| |||||||| |||||||||||||||||||||||||    
T  34036019 tctcacaatacatatgtcagtagataagctcaaataagtcaattcaaacagac 34036071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 34744088 - 34744180
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | |||| ||| |||  ||||| ||||||| ||||||||| |||||||  |||||||| ||||||| | |||||||||||||    
T  34744088 tgaaaattgtcataagttcttttcattagttcttccaaacagtctcacaaatcttatgttagtagataagctcaaattattcaattcaaacag 34744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 18765367 - 18765422
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    |||| ||||||||||||| ||||||||||||||||||  ||||||| |||||||||    
T  18765367 cataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataa 18765422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 46280262 - 46280211
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataag 141  Q
    ||||||||||||| ||||||||||| |||||| | |||||||||||||||||    
T  46280262 gttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaataag 46280211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 31744897 - 31744955
Alignment:
Q  97 caaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacaga 155  Q
    |||||||||||| |||| ||| ||||||||||||| |||||||||| ||| ||||||||    
T  31744897 caaacaatctcataaaatttacgtcggtagataaattcaaataagttaatccaaacaga 31744955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 37064460 - 37064382
Alignment:
Q  80 gtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| |||| || ||||| |||||||| ||| ||||||| || ||||||||  |||||||||||||| |||||||||||    
T  37064460 gttttcataagtgctcccgaacaatctaacagaacttatatcagtagataagatcaaataagtcaatccaaacagaccc 37064382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 19214416 - 19214359
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatg 119  Q
    ||||||||||| |  | ||||| |||| ||||||||||||||||||||||||||||||    
T  19214416 tgaaaattgtcatttgctgttttcataagttctcccaaacaatctcacaaaacttatg 19214359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 41040267 - 41040320
Alignment:
Q  105 ctcacaaa-acttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||| |||||| || |||||||||||||||||| ||||||||||||||||    
T  41040267 ctcacaaatacttatatcagtagataaactcaaataaatcaattcaaacagacc 41040320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 24048651 - 24048691
Alignment:
Q  113 acttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  24048651 acttatgtcagtagataaactcaaataagtaaattcaaaca 24048691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 20526523 - 20526602
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||| |||| |||||| |||||| |||||||||| || |  |  ||||||||||||||||||||||| |||||| ||||    
T  20526523 tgttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaaataagtcaatccaaacaaaccc 20526602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 22283628 - 22283565
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||| ||||| |||||||||| ||||| | ||||||||  |||||||||||||| ||||||    
T  22283628 gttctcctaaacagtctcacaaaatttatgacagtagataagttcaaataagtcaatccaaaca 22283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 43694550 - 43694491
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattca 149  Q
    ||||||||||||| ||||  ||||||||| |  |||||||||||||||||| ||||||||    
T  43694550 gttctcccaaacagtctcgtaaaacttatattagtagataaactcaaataaatcaattca 43694491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 11783039 - 11782957
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||| || | ||||||| || || |||||| |||||||  || |||||||| ||||||||||||||| |||||| ||||    
T  11783039 agttgttttcaaaagttctcctaatcagtctcactaaacttacatcagtagataatctcaaataagtcaatccaaacaaaccc 11782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 18962579 - 18962501
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| || |||| ||||||| ||||| ||| |||||||||||||| ||||||||  || ||||| ||||| |||||||    
T  18962579 agttggtttcataagttctccaaaacagtctaacaaaacttatgtcagtagataagatcgaataactcaatccaaacag 18962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 44917483 - 44917445
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  44917483 ttatgtcgggagataaactcaaataagtcaatccaaaca 44917445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 49019957 - 49020019
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||||||||| ||||||||||| |||||| | |||||| ||  ||||||||||| |||||    
T  49019957 gttctcccaaacagtctcacaaaacatatgtcagcagataagctacaataagtcaatccaaac 49020019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 30749029 - 30748952
Alignment:
Q  78 ttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||| |||||| |||||| |||||||    |||||||| |||||||| ||||||||| |||||||||||||    
T  30749029 ttgttttcataagttctctcaaacagtctcacattggcttatgtcagtagataagctcaaataactcaattcaaacag 30748952  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 32157085 - 32157114
Alignment:
Q  125 agataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||||||||||||||||||    
T  32157085 agataaactcaaataagtcaattcaaacag 32157114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 45338541 - 45338602
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||||||||||| ||||| ||||||||||   || |||||||||||||||| |||| ||||    
T  45338541 gttctcccaaacagtctcaaaaaacttatgctagtggataaactcaaataagccaatccaaa 45338602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 11619168 - 11619072
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||| | |||||||| ||||  ||||||||| |  | |||  || |||||||| |||||||| |||||||||| |||| |||||| ||||    
T  11619168 tgaaaattgtcataagttgttttcataaattctcccaatctgtttcatgaagcttatgtcagtagataagctcaaataagccaatccaaacaaaccc 11619072  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 20234548 - 20234612
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | ||||||||||||||||   ||| |||| |||||||||| ||||| ||||||    
T  20234548 gttctcccaaaaagtctcacaaaacttatgcaagtatataagctcaaataagccaattgaaacag 20234612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 25596124 - 25596184
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| |||||||||||||  ||||||  ||||||||| ||||||||||||| | |||||||    
T  25596124 tccctaacaatctcacaatgcttatgctggtagataagctcaaataagtcagtccaaacag 25596184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 28691783 - 28691751
Alignment:
Q  125 agataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||||||||||||||||| ||||||||||    
T  28691783 agataaactcaaataagtcaatccaaacagacc 28691751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 30134246 - 30134286
Alignment:
Q  116 tatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  30134246 tatgtcagtagataagctcaaataagttaattcaaacagac 30134286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 33128843 - 33128903
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||| |||||||||| ||  | | |||| ||||||||||||||| |||||||    
T  33128843 tcccaaacaatcttacaaaacttaagttagcatataagctcaaataagtcaatccaaacag 33128903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 47046065 - 47046021
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaacagacccc 159  Q
    ||||||| |||||||| | ||||||||||||| ||||||||||||    
T  47046065 ttatgtcagtagataagcacaaataagtcaatccaaacagacccc 47046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 2295156 - 2295248
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | || ||||| |||| ||||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||||||||||    
T  2295156 tgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaacag 2295248  T

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Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 6102241 - 6102304
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  6102241 gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 6102304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 50644251 - 50644174
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||  |||||||| ||||||||||||||| ||||||    
T  50644251 agttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 49938807 - 49938891
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||||||||| | || ||||| |||| |||||||||||||||||||||||||||||| |   | ||||||||||||||||||||    
T  49938807 tgaaaattgtcataagctgttttcataagttctcccaaacaatctcacaaaacttatgccacgatataaactcaaataagtcaat 49938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 33204381 - 33204310
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||| ||  ||||||||    
T  33204381 cataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataagtcgatctaaacagac 33204310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 38001672 - 38001734
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataag 141  Q
    ||||| |||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  38001672 tgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataag 38001734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 3234011 - 3233932
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacaga 155  Q
    |||||||| |||| |||||||| |||| |||||||||||||| | |  ||||||| ||||||||||||||| ||||||||    
T  3234011 agttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaacaga 3233932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 24334284 - 24334345
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||| |||| | |||||||||||||||||| || ||||||||||||||||||||| |||||    
T  24334284 ttctctcaaatagtctcacaaaacttatgtccgttgataaactcaaataagtcaatccaaac 24334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 46504214 - 46504137
Alignment:
Q  77 gttgtttacatacgttctcccaaacaatctcacaaa-acttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||| |||| | ||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  46504214 gttgttttcataagctctaccgaacagtctcacaaatacttatgccggtagataaactcaaataagtcaattccaaca 46504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 39658504 - 39658444
Alignment:
Q  77 gttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaa 137  Q
    ||||||| |||  |||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  39658504 gttgttttcatgagttctcccaatcaatctcacaaaacttatgtcggtggataagctcaaa 39658444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 39976197 - 39976138
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtca 144  Q
    |||| |||||| |||||| | |||||||||||||||| |||||||| |||||||||||||    
T  39976197 cataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataagtca 39976138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 36514672 - 36514606
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagt 142  Q
    |||| ||| |||| |||||||| |||| ||||| |||||||||| | ||||||||||||||||||||    
T  36514672 agttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactcaaataagt 36514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 37617446 - 37617384
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||| |||||| |||||||||||||| | |  ||||||||||||||||||||||| ||||||    
T  37617446 ttctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 7028399 - 7028440
Alignment:
Q  99 aacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  7028399 aacaatctcacaaaacttatgtcggcagataagctcaaataa 7028440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 17009539 - 17009503
Alignment:
Q  115 ttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||||| |||||||||||||||||||||||||||||    
T  17009539 ttatgtcagtagataaactcaaataagtcaattcaaa 17009503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 34952290 - 34952358
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||| ||||||||||| |||||  |  ||||||| |||||||||| |||| |||||||||||    
T  34952290 gttctcccaaataatctcacaaatcttatcccaatagataagctcaaataagccaatccaaacagaccc 34952358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 6292580 - 6292643
Alignment:
Q  91 ttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||| ||   |||||||| |||||||| ||||||||||||||| ||||||    
T  6292580 ttctcccaaacaatctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 15943027 - 15943110
Alignment:
Q  69 tgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    |||| ||||||||||  ||| ||||||| ||||| |||||||||  ||||| |  || |||||||||||||||| |||||||||    
T  15943027 tgtcatcagttgtttctatatgttctcctaaacagtctcacaaagtttatgccaatatataaactcaaataagtaaattcaaac 15943110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 38116058 - 38116003
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||| ||||  |||||||||||||| ||| |||||||| |||||||||||||||    
T  38116058 ttctccaaaaccgtctcacaaaacttacgtcagtagataagctcaaataagtcaat 38116003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 40414005 - 40413943
Alignment:
Q  90 gttctcccaaacaatctcacaaaactt-atgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||||||||||||||| ||||   || |||||||| ||||||||||||||||||| ||||||    
T  40414005 gttctcccaaacaatcttacaagtgttgatgtcggttgataaactcaaataagtcagttcaaa 40413943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 30014028 - 30013995
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||||||||||||||||||||| |||||||||    
T  30014028 gtagataaactcaaataagtcaatccaaacagac 30013995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 34303215 - 34303178
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  34303215 cttatgtcggtagataagctcaaacaagtcaattcaaa 34303178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 1510286 - 1510230
Alignment:
Q  96 ccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||| | ||||||||||||||  | || ||||||||||||||| ||||||||||    
T  1510286 ccaaacagtatcacaaaacttatgctgatatataaactcaaataagccaattcaaac 1510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7244622 - 7244570
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    ||||||||||||||| ||  |||||||||||||||| |||||| ||| |||||    
T  7244622 tctcacaaaacttatatcaatagataaactcaaataggtcaatccaaccagac 7244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 15784410 - 15784458
Alignment:
Q  95 cccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtc 143  Q
    |||||||| ||| |||||||||||||  |||||||| ||||||||||||    
T  15784410 cccaaacagtcttacaaaacttatgttagtagataagctcaaataagtc 15784458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 29793877 - 29793913
Alignment:
Q  122 ggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  29793877 ggtaaataaattcaaataagtcaattcaaacagaccc 29793913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 52315193 - 52315113
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    ||||||||  ||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  52315193 agttgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactcaaataagtcaatccaaagagac 52315113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 21731666 - 21731574
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||  | || ||||| |||| |||||||||||||||||||||||||||||||| |||||||  |||||||||  |||| |||||||    
T  21731666 tgaaaattgtgataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacag 21731574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 27043811 - 27043744
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| ||||||| | |||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  27043811 ttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacagaccc 27043744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 29657444 - 29657527
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaa 145  Q
    ||||||||||| | || ||||| |||| |||||| ||| |||||||||||||||| ||| ||||||||| ||||||||||||||    
T  29657444 tgaaaattgtcataagctgttttcataagttctctcaagcaatctcacaaaacttgtgttggtagataagctcaaataagtcaa 29657527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 55437150 - 55437228
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| |||| |||||  |||||||| |||||||||||||| | ||||||||||||||||||| |||| |||||||    
T  55437150 agttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaacag 55437228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 15173283 - 15173223
Alignment:
Q  92 tctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||||||| |||||||||||||||||| ||||||||  |||||||||||||| |||||    
T  15173283 tctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 54426103 - 54426195
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | || ||||| | || |||||||||| || |||||||||||||||| | |||||||| |||||||||| |||| |||||||    
T  54426103 tgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaacag 54426195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 39691130 - 39691067
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| |||||| ||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  39691130 ttctctcaaacagtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaacag 39691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 40174634 - 40174701
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||| |||| ||| ||||||||| |||||||||||||||||  |||||||||||||||||| |||||    
T  40174634 tgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataaatcaat 40174701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 41336848 - 41336911
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||| || ||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  41336848 gttcttcctaactatctcacaaaacttatgtgagtagataaactcaaataagtcaatccaaaca 41336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 43506026 - 43506084
Alignment:
Q  93 ctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  43506026 ctccctaacagtctcacaaaacttttgtcggtggataaactcaaataagtcgattcaaa 43506084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 17822875 - 17822783
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||| | || ||||| |||| ||||||| ||| | ||||||| |||||||||| |||||||| ||||||||||| ||| |||||||    
T  17822875 tgaaaaatgtcataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaacag 17822783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 29388702 - 29388766
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||||| |||||||||||||  ||||||||  |||||||||||||  |||||||    
T  29388702 gttctcccaaacaatcttacaaaacttatgttagtagataaggtcaaataagtcaacccaaacag 29388766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 35571613 - 35571545
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||| ||| |||||||||||||   |||||||| |||||||||| |||| |||||||||||    
T  35571613 gttctcccaaactatcccacaaaacttatgctagtagataagctcaaataagccaatccaaacagaccc 35571545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 679412 - 679447
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||||||||||||||||||||||||||    
T  679412 gtagataaactcaaataagtcaattcaaacagaccc 679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 2244140 - 2244207
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||| | ||| |||||||||||| ||||||||||||  |||| ||||| |||||||||||    
T  2244140 ttctcccaaacagtttcaaaaaacttatgtcagtagataaactcggataaatcaatccaaacagaccc 2244207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 49940160 - 49940085
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| |||| |||||| |||||| |||||||||||||||||  | || ||| ||||||||||||||| |||||||    
T  49940160 tgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaacag 49940085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 41433487 - 41433529
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  41433487 cttatgtcaggagataaactcaaataagtcaattcaaacagac 41433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 25571336 - 25571425
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccccaagactaac 168  Q
    ||||| |||| ||||||| ||||| | |||   |||||||||| ||||||||||||||||||| |||| ||||||| ||| || ||||||    
T  25571336 tgtttccataagttctcctaaacagtttcatgtaacttatgtcagtagataaactcaaataagccaatccaaacaggccctaaaactaac 25571425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 27330083 - 27329994
Alignment:
Q  65 aaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| | |||||||| ||||  | ||| ||||||||||||  ||||||||||  |||||||| || ||||||| ||||||||||||    
T  27330083 aaattgtcataagttgttttcataaatcctctcaaacaatctcattaaacttatgtaagtagataagcttaaataagccaattcaaacag 27329994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 8705029 - 8705093
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||| || ||||||||||||||||||  ||||||| ||||||| || |||| |||||||    
T  8705029 gttctcccaatcagtctcacaaaacttatgtcaatagataagctcaaatgagccaatccaaacag 8705093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 13126558 - 13126490
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||| ||||||| |||||||||||||||||  |||| ||| || ||||||| |||| |||||||||||    
T  13126558 gttcttccaaacagtctcacaaaacttatgttagtaggtaagctaaaataagccaatccaaacagaccc 13126490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 44797972 - 44798032
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||| |||||||||||||||||| |||||||| || |||| || |||| |||||||    
T  44797972 tcccaaacagtctcacaaaacttatgtcagtagataagcttaaatcagccaatccaaacag 44798032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 7368003 - 7367968
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||||||||||||||| |||||||||||    
T  7368003 gtagataaactcaaataagtcaatccaaacagaccc 7367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 24169351 - 24169414
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||| |||| | |||||||||||||||| | |||||||||||| |||||| |||| ||||||    
T  24169351 gttctctcaaatagtctcacaaaacttatgccagtagataaactctaataagccaatccaaaca 24169414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 42403988 - 42403941
Alignment:
Q  107 cacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||| || ||||| ||||||||||||||| |||||||    
T  42403988 cacaaaacttatgtcagttgataagctcaaataagtcaatccaaacag 42403941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 1706711 - 1706757
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaa 137  Q
    ||||| |||||  |||||||||||||||||| |||||||||||||||    
T  1706711 ttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 6987722 - 6987660
Alignment:
Q  92 tctcccaaacaatctcacaaa-acttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||| ||||||||| ||||||    
T  6987722 tctcccaaacagtctcacaaacacttatgctagtagataaactcaattaagtcaatacaaaca 6987660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 25904216 - 25904150
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaa 145  Q
    ||||| |||| | ||||||||||| |||||||||| |||||||  | ||||| ||||||||||||||    
T  25904216 tgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaataagtcaa 25904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 44862965 - 44862903
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||||||||||| || | ||||| || |||||||| | |||| ||||||    
T  44862965 ttctcccaaacaatctcacaaaacttttgccagtagacaagctcaaatatgccaatccaaaca 44862903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 19305014 - 19305075
Alignment:
Q  91 ttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||| |||||||||||||  ||||||||  ||||||| ||||||||||||||| ||||    
T  19305014 ttctcccacacaatctcacaaatgcttatgtcaatagataatctcaaataagtcaatccaaa 19305075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 22030263 - 22030352
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||||||||| | || ||||| |||| ||||||||||| |  |||||||||||||||    |||| || ||||||||||||||| ||||    
T  22030263 tgaaaattgtcataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataagtcaatacaaa 22030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 29774323 - 29774392
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| ||||||| ||||| ||||||||||||   ||| ||| |||||||||||||||||| | |||||||    
T  29774323 cataagttctcctaaacagtctcacaaaactctagtcagtaaataaactcaaataagtcattccaaacag 29774392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 40613289 - 40613322
Alignment:
Q  120 tcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||||||||||||||||| |||||    
T  40613289 tcggtagataaactcaaataagtcaattgaaaca 40613322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 1133044 - 1133084
Alignment:
Q  118 tgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| |||||||| |||||||||||||||||||||| ||||    
T  1133044 tgtcagtagataagctcaaataagtcaattcaaacacaccc 1133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 18815111 - 18815175
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||||| ||||||||||||||||   |||| ||| |||||||||| |||| |||||||    
T  18815111 gttctctcaaacagtctcacaaaacttatgctagtaggtaagctcaaataagccaatccaaacag 18815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 22662209 - 22662169
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  22662209 cttatgttagtagataaactcaaataagtcaatccaaacag 22662169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 22666688 - 22666648
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  22666688 cttatgttagtagataaactcaaataagtcaatccaaacag 22666648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 26590636 - 26590680
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||  |||||||||||||||||| ||||| |||||||||||    
T  26590636 cttatgtaagtagataaactcaaataattcaatccaaacagaccc 26590680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 25447220 - 25447161
Alignment:
Q  97 caaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  25447220 caaacagtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaacagac 25447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 20257596 - 20257689
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagat-aaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | || || || |||| ||||||||||||| |||||||||| ||||| | |||||| ||||||||||||| |||| |||||||    
T  20257596 tgaaaattgtcattagctgctttcataagttctcccaaacagtctcacaaaatttatggctgtagataaaactcaaataagccaatccaaacag 20257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 21367744 - 21367821
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    ||||| |||| ||||||||||||| || |||||||||||||  ||||||||| |||||||||| |||| |||| ||||    
T  21367744 tgttttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaaataagccaatccaaagagac 21367821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 24085331 - 24085258
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||| |||| ||||||| || || |||||||||||||||| |||||||||| |||||||||| |||| |||||    
T  24085331 tgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 30657398 - 30657443
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacagacccc 159  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  30657398 cttatgtcagtagataaactcaaataaatcaattcaaacagacccc 30657443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 31365198 - 31365114
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||||||||| | || || || |||| ||||||||||||| |||||||||||||||| |  ||||||| |||||||||| ||||    
T  31365198 tgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataagccaat 31365114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 402535 - 402460
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| |||||||||||||||||| |||  ||||||||||||  || |||||||||||||| |||||  |||||||    
T  402535 tgttttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaataggtcaacccaaacag 402460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 26990207 - 26990144
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||||| || |||| | |||||| |||||||| ||||||||||||||| ||||||    
T  26990207 gttctcccaaacaatatcgcaaagcctatgtcagtagataagctcaaataagtcaatccaaaca 26990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 33405160 - 33405118
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  33405160 tctcccaaaacttatgtcagtagataaactcaaataagtcaat 33405118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 42747778 - 42747700
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||| |||| ||||||  ||||| |||||||| |||||||   |||||||||||||||||||||||  |||||||    
T  42747778 agttgttttcataagttctcaaaaacagtctcacaatacttatggaagtagataaactcaaataagtcaaaccaaacag 42747700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 18405824 - 18405763
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||| |||| |||||  |||||| |||||||||||||||||| |||||||| |||||||||    
T  18405824 tgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataa 18405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 26911699 - 26911740
Alignment:
Q  110 aaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  26911699 aaaacttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 36783334 - 36783281
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtc 143  Q
    ||||||||||||| ||||||||||||||| |   ||||||||||||||||||||    
T  36783334 gttctcccaaacagtctcacaaaacttatattaatagataaactcaaataagtc 36783281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 16073007 - 16072959
Alignment:
Q  106 tcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||||  ||||||| ||||||||||||||| |||||||    
T  16073007 tcacaaaacttatgtcattagataagctcaaataagtcaatccaaacag 16072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 31365319 - 31365235
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||||||||| | || ||| | |||| ||||||||||||| | |||||||| ||||| |  |||||||||||||||||| ||||    
T  31365319 tgaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataagccaat 31365235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 42799960 - 42799884
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaa-ctcaaataagtcaattcaaacag 154  Q
    ||||| |||| ||||||||||| | | ||||||||| |||||| ||||||||| |||||||||| |||| |||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaacag 42799884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 50946261 - 50946201
Alignment:
Q  97 caaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||| ||||||| |||||||  | |||||||||||||||||||| | ||||||||||    
T  50946261 caaacaatatcacaaatcttatgttaggagataaactcaaataagtcattccaaacagacc 50946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 28779439 - 28779470
Alignment:
Q  122 ggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||||||||||||||||||||||    
T  28779439 ggtagataaactcaaataagtcaattcaaaca 28779470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 36507073 - 36507007
Alignment:
Q  93 ctcccaaacaatctcacaaaact--tatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||||| ||||||||| ||  ||| || ||||||||||||||||||| |||| ||||||||||    
T  36507073 ctcccaaacagtctcacaaagctcttatatcagtagataaactcaaataagccaatccaaacagacc 36507007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 39980806 - 39980885
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||| |||| ||||||  ||||| ||||||||||||||||   |||||||| |||||| ||| |||| |||||||||||    
T  39980806 tgttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagaccc 39980885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 43875587 - 43875622
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||||||||||||||||||||| ||||    
T  43875587 gtagataaactcaaataagtcaattcaaacaaaccc 43875622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 31615515 - 31615469
Alignment:
Q  117 atgtcggtagataaactcaaataagtcaattcaaacagaccccaaga 163  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||||    
T  31615515 atgtccgtagataaactcaaataagtcaatccaaacataccctaaga 31615469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 37389257 - 37389311
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataa 130  Q
    |||||||| |||| |||||||| || | |||||||||||||||||| ||||||||    
T  37389257 agttgttttcataagttctcccgaagagtctcacaaaacttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 584135 - 584196
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    |||||| ||||| ||||||| ||||||||   |||||||| ||||||||||||||| |||||    
T  584135 ttctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 20170689 - 20170632
Alignment:
Q  97 caaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||||| |||||||||||  ||||||| |||||||||| |||| |||||||    
T  20170689 caaacagtctcactaaacttatgtcactagataagctcaaataagccaatccaaacag 20170632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 32582828 - 32582888
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||| |||   ||||||||||   |||||||||||||||||||||||| ||||||    
T  32582828 gttctcccaaacagtct---aaaacttatggtagtagataaactcaaataagtcaatccaaaca 32582888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 33046762 - 33046717
Alignment:
Q  108 acaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||| | ||||||||||| ||||||| |||||||||||    
T  33046762 acaaaacttatgccagtagataaactaaaataagccaattcaaaca 33046717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 34610770 - 34610725
Alignment:
Q  108 acaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||||||||| |||||||| |||||||||||| || ||||||    
T  34610770 acaaaacttatgtcagtagataagctcaaataagtccatacaaaca 34610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 22976 - 22892
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||||| || | || ||||| ||||  |||||| |||||||||||||||||||||| | ||||| ||  ||||||||| ||||    
T  22976 tgaaaattatcgtaagctgttttcataacttctcctaaacaatctcacaaaacttatgccagtagacaagttcaaataagccaat 22892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 9832737 - 9832681
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||||||||||| | | ||||||||||||||  || |||| |||||||||||||||    
T  9832737 gttctcccaaacagtttgacaaaacttatgtcaataaataagctcaaataagtcaat 9832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 11253622 - 11253654
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacaga 155  Q
    |||||||| ||||||||||||||||||||||||    
T  11253622 gtagataatctcaaataagtcaattcaaacaga 11253654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 24684829 - 24684741
Alignment:
Q  65 aaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||| | |||||||| |||| ||||  |||||   ||||| |||||||||| | |||||||| ||||||||||| ||| ||||||    
T  24684829 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 26878288 - 26878352
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| |||||| | ||||  |||||||||| |||||||| ||| |||||| ||||||||||||    
T  26878288 gttctctcaaacagtttcacgcaacttatgtcagtagataagctcgaataagccaattcaaacag 26878352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 32663754 - 32663794
Alignment:
Q  118 tgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  32663754 tgtcggtagataagctcaaataagccaatccaaacagaccc 32663794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 47904026 - 47903994
Alignment:
Q  126 gataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||||||||||| |||||||||||    
T  47904026 gataaactcaaataagtcaatccaaacagaccc 47903994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 53493907 - 53493843
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||||||||  ||||||||||||   ||||||| |||||| || ||||| |||||||    
T  53493907 gttctcccaaacaatcttgcaaaacttatgtaattagataagctcaaacaaatcaatccaaacag 53493843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 1096573 - 1096641
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||| ||||||||||| ||||||||||||||||||||  || |||||||||||||||||||| ||||||    
T  1096573 catatgttctcccaaaaaatctcacaaaacttatgtcactaaataaactcaaataagtcaatccaaaca 1096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 38602415 - 38602479
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  38602415 gttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacag 38602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 32840982 - 32840895
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccccaaga 163  Q
    |||||||| |||| ||||||||||||| |||| |||||||| |||  |||||||| ||||| |||||||||||||| |||||| ||||    
T  32840982 agttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctcaagtaagtcaattcaaatagaccctaaga 32840895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 36963336 - 36963266
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacccca 160  Q
    ||||||||||||| |||||||||||||||| | |||||| | |||||||||| |||| |||||||||||||    
T  36963336 gttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaacagacccca 36963266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 1074255 - 1074187
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||||| || ||||||||||||||||| |  ||| |||||||||||||||||||| ||||||    
T  1074255 catacgttctcccgaaaaatctcacaaaacttatatgagtaaataaactcaaataagtcaatccaaaca 1074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 30251436 - 30251372
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||| |||||| ||||||||||| |||||||| |||||||||| |||| |||||||    
T  30251436 gttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaacag 30251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 1058059 - 1057997
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaac 152  Q
    ||||||||||||| |||||||||||||||||  |||||||| |||||||||| || |||||||    
T  1058059 gttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaataagccagttcaaac 1057997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 6950396 - 6950466
Alignment:
Q  77 gttgtttacatacgttctcccaaacaatctcacaaa-acttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||||||||| | |||||||||||||||||||||   ||||| | ||||||||||||||||||||||||    
T  6950396 gttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataagtcaat 6950466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 26771325 - 26771403
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||||||||| | || ||||| |||| ||||||||||||| |||||||||||||||| | |||||||| |||| ||||    
T  26771325 tgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctcagataa 26771403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 42893472 - 42893402
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacccca 160  Q
    ||||||||||||| |  ||||||| ||||| |||||||||||||||||||||| ||| |||||||| ||||    
T  42893472 gttctcccaaacactagcacaaaaattatgccggtagataaactcaaataagttaatccaaacagagccca 42893402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 26215542 - 26215615
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||| |||||||||||||||||||||||||||  ||  ||| ||||  |||||||||||||| |||||||||||    
T  26215542 cataagttctcccaaacaatctcacaaaacttgcgtttgtaaataagttcaaataagtcaatccaaacagaccc 26215615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 35534621 - 35534524
Alignment:
Q  64 aaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccccaa 161  Q
    ||||||||| | || ||||| || | |||||| |||||| |||||||||||||||||  |||||||| ||||||||||||| |  |||||| ||||||    
T  35534621 aaaattgtcataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataagtcattctaaacaggccccaa 35534524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 43717927 - 43717855
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    ||||| |||| ||||||||||| | ||||||||||||||||||  ||||||| |||||||||| |||| ||||    
T  43717927 tgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 10758267 - 10758176
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||||||||| | || ||||| ||||  ||||  |||||| |||||||||||||||||  | ||||||  |||||||||||||||||||||    
T  10758267 tgaaaattgtcataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaaca 10758176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 27028920 - 27028971
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagt 142  Q
    ||||||||||||||||||| ||||||||| | || |||||||||||||||||    
T  27028920 ttctcccaaacaatctcactaaacttatgccagtggataaactcaaataagt 27028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 38648428 - 38648495
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    ||||| |||| | ||||||||||| |||||||||||||||||| |||||||| || ||||||| ||||    
T  38648428 tgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataagccaat 38648495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 2488005 - 2487927
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||| |||| ||||||||||||| ||||||||   |||||||| |||||| |||||||||||| |||| ||||||    
T  2488005 agttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaaca 2487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 15247745 - 15247695
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||||||||||||||  ||||||||| ||||||||||||| ||||||||    
T  15247745 tctcacaaaacttatgtaagtagataaattcaaataagtcaaatcaaacag 15247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 922385 - 922320
Alignment:
Q  94 tcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtc-aattcaaacagaccc 158  Q
    ||||||||| | |||||||||||| ||| ||| ||||||||||||||||| ||| |||||||||||    
T  922385 tcccaaacagtatcacaaaacttaggtcagtatataaactcaaataagtctaatccaaacagaccc 922320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 6525900 - 6525961
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||| ||| ||||||||| || ||||||||||||||  ||||||||||||||||||| ||||    
T  6525900 cataagttttcccaaacagtcacacaaaacttatgttagtagataaactcaaataagacaat 6525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 14280416 - 14280339
Alignment:
Q  78 ttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| ||||  ||| ||||||||||| ||||||| |||||| | ||||||||| |||||||||||||| |||||||    
T  14280416 ttgttttcataaattcacccaaacaatcacacaaaaacttatgccagtagataaaatcaaataagtcaatccaaacag 14280339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 18930797 - 18930850
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    |||||||||||| ||| || ||| ||||||||||||||||||| ||||||||||    
T  18930797 tctcacaaaactcatgccgttaggtaaactcaaataagtcaatccaaacagacc 18930850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 7008710 - 7008750
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  7008710 cttatgccagtagataaactcaaataagtcaattcaaacag 7008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 30657760 - 30657696
Alignment:
Q  89 cgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    |||||||  ||||| |||||||||| |||||||  |||||||||||||||||||| || ||||||    
T  30657760 cgttctcataaacagtctcacaaaatttatgtcattagataaactcaaataagtcgatccaaaca 30657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 1892201 - 1892138
Alignment:
Q  96 ccaaacaatctcacaa-aacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||||||    ||||| ||||||||||||||||||||||||||  ||||||||||    
T  1892201 ccaaacaatctcacaagtgtttatgacggtagataaactcaaataagtcaatctaaacagaccc 1892138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 10727465 - 10727500
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||||||||||||||| |||||||||||    
T  10727465 gtagataaactcaaataagtcaatccaaacagaccc 10727500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 6882004 - 6882046
Alignment:
Q  79 tgtttacatacgttctcccaaacaatctcacaaaacttatgtc 121  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||    
T  6882004 tgttttcataggttctcccaaacagtctcacaaaacttatgtc 6882046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 15180641 - 15180691
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| |||||||||| | ||||||||||||||||||| |||| |||||||    
T  15180641 tctcataaaacttatggcagtagataaactcaaataagccaatccaaacag 15180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 28763428 - 28763486
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgt 120  Q
    ||||||||||  | || ||||| |||| ||||||||||||| |||||||||||||||||    
T  28763428 tgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgt 28763486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 40357049 - 40357087
Alignment:
Q  123 gtagataaactcaaataagtcaattcaaacagaccccaa 161  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  40357049 gtagataaactcaaataaatcaatccaaacagaccccaa 40357087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 41336598 - 41336556
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacagac 156  Q
    |||||| ||||||||||||||||| |||||||||||| |||||    
T  41336598 cttatggcggtagataaactcaaacaagtcaattcaatcagac 41336556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 12497054 - 12496993
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||| |||||| |||||||||||||||| | | |||||| ||||||||| ||||| ||||    
T  12497054 gttctctcaaacagtctcacaaaacttatgccaggagataagctcaaataaatcaatccaaa 12496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 900693 - 900629
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||| || || ||||||||||| |||||| ||| |||| |||||||||  ||||||||||||    
T  900693 gttctcctaatcagtctcacaaaacatatgtcagtatataagctcaaataaaccaattcaaacag 900629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 1930123 - 1930163
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataa 130  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  1930123 gttctcccaaataatgtcacaaaacttatgtcagtagataa 1930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 8407738 - 8407794
Alignment:
Q  98 aaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| ||||||||||| |||| || |||||||||||||||| || ||| |||||||    
T  8407738 aaacagtctcacaaaacctatgccgctagataaactcaaatatgtgaatccaaacag 8407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 16915877 - 16915833
Alignment:
Q  102 aatctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||||||||| ||||||  |||||||||||||||||| |||||    
T  16915877 aatctcacaaaatttatgtaagtagataaactcaaataaatcaat 16915833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 18591958 - 18591890
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||||| ||||| |||||||||  |  ||||||| ||||| |||  ||||||||||||||||    
T  18591958 gttctcccaaacagtctcataaaacttataccaatagataagctcaattaaaccaattcaaacagaccc 18591890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 32213219 - 32213271
Alignment:
Q  102 aatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||||| || ||| |||| |||||||||| |||| |||||||    
T  32213219 aatctcacaaaacttatatcagtatataagctcaaataagacaatccaaacag 32213271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 39551206 - 39551130
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||| ||||  |||||||||||| | |||||||  ||||| || |||||||| ||||||||||||||| ||||    
T  39551206 agttgtttccataaattctcccaaacagtttcacaaatgcttatatccgtagataatctcaaataagtcaatccaaa 39551130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 21405136 - 21405061
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccccaagact 165  Q
    |||| |||||| | |||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||| ||||||    
T  21405136 gttcccccaaatattctcacaaaacttatgtcagtatataagctcaaataagtcaatccaaacagaccctaagact 21405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 31623610 - 31623706
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    ||||||||||| | || | ||| || | |||||||||||| | |||| |||||||| | | ||||||||| ||||||||||||||||||||||||||    
T  31623610 tgaaaattgtcataagctattttcagaagttctcccaaaccacctcaaaaaacttaggccagtagataaattcaaataagtcaattcaaacagaccc 31623706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 10645381 - 10645299
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacagaccc 158  Q
    |||||||| |||| ||||||||||||| ||| ||||||||||||||  ||||||| ||||||| || |||| |||||| ||||    
T  10645381 agttgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaacataccc 10645299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 34404713 - 34404644
Alignment:
Q  85 catacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| ||||||||||| | || ||||||||||||||| || ||||||||||||||||| ||| |||||||    
T  34404713 cataagttctcccaaagactcacacaaaacttatgtcagttgataaactcaaataagtaaatccaaacag 34404644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 7351646 - 7351586
Alignment:
Q  98 aaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaacagacc 157  Q
    ||||||||||||||   |||||||| ||||||||||||||||||||||||| |||||||||    
T  7351646 aaacaatctcacaagtgcttatgtcagtagataaactcaaataagtcaatttaaacagacc 7351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 34430775 - 34430866
Alignment:
Q  62 tgaaaattgtcttcagttgtttacatacgttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||| | |||||||| ||||  || ||||||||||||| ||||||||||| || || ||||| |||||||||| |||| |||||||    
T  34430775 tgaaaattgtcataagttgttttcataaattatcccaaacaatcttacaaaacttat-tcagttgataagctcaaataagccaatccaaacag 34430866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 34910390 - 34910327
Alignment:
Q  91 ttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| |||||||||||| ||||||| || || ||||||||||||||||||| || | |||||||    
T  34910390 ttcttccaaacaatctcccaaaactgatatcagtagataaactcaaataagccagtccaaacag 34910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 35069585 - 35069530
Alignment:
Q  99 aacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    |||| ||| |||||||||||||| |||||||| |||||||||| |||| |||||||    
T  35069585 aacagtcttacaaaacttatgtcagtagataagctcaaataagccaatacaaacag 35069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 2455076 - 2455126
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataa 140  Q
    ||||||||||||| |||||||||||||||||  ||||||||  ||||||||    
T  2455076 gttctcccaaacagtctcacaaaacttatgttagtagataagttcaaataa 2455126  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 30536924 - 30536878
Alignment:
Q  113 acttatgtcggtagataaactcaaataagtcaattcaaacagacccc 159  Q
    ||||||||  |||||||||||||||||||||||| ||||||| ||||    
T  30536924 acttatgtaagtagataaactcaaataagtcaatccaaacaggcccc 30536878  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 32729111 - 32729069
Alignment:
Q  104 tctcacaaaacttatgtcggtagataaactcaaataagtcaat 146  Q
    |||||||||||||| ||  ||||||||||||||||||||||||    
T  32729111 tctcacaaaacttaagtttgtagataaactcaaataagtcaat 32729069  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 848077 - 848140
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||| ||||||| |||||||||||||||| |  ||||||| |||||||||| |||| |||||||    
T  848077 gttcttccaaacagtctcacaaaacttatg-ctatagataagctcaaataaggcaatccaaacag 848140  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 2455922 - 2455958
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaa 150  Q
    |||||| |||||||||| |||||||||||||||||||    
T  2455922 cttatgccggtagataagctcaaataagtcaattcaa 2455958  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 2457053 - 2457093
Alignment:
Q  114 cttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||||||||||||| |||||||||| |||| |||||||    
T  2457053 cttatgtcggtagataatctcaaataagccaatccaaacag 2457093  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 6310194 - 6310166
Alignment:
Q  130 aactcaaataagtcaattcaaacagaccc 158  Q
    |||||||||||||||||||||||||||||    
T  6310194 aactcaaataagtcaattcaaacagaccc 6310166  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 24982793 - 24982857
Alignment:
Q  90 gttctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaacag 154  Q
    ||||||| ||||| |||||||||||||||||  ||||||||  || ||| ||||||| |||||||    
T  24982793 gttctccaaaacagtctcacaaaacttatgttagtagataagatctaattagtcaatccaaacag 24982857  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 26559236 - 26559160
Alignment:
Q  76 agttgtttacatacgttctcccaaacaatctcacaaaa-cttatgtcggtagataaactcaaataagtcaattcaaa 151  Q
    |||||||| |||| ||||| ||||||| |||||||||  |||||| | |||| ||||||||||||||| ||| ||||    
T  26559236 agttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 33893 - 33832
Alignment:
Q  92 tctcccaaacaatctcacaaaacttatgtcggtagataaactcaaataagtcaattcaaaca 153  Q
    ||||| ||||||||||| | | |||||||| ||||||||| ||||||||||||||| |||||    
T  33893 tctcctaaacaatctcaaagagcttatgtcagtagataaattcaaataagtcaatttaaaca 33832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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