View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2543_high_5 (Length: 274)
Name: NF2543_high_5
Description: NF2543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2543_high_5 |
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| [»] scaffold0140 (1 HSPs) |
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Alignment Details
Target: scaffold0140 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 2948 - 3038
Alignment:
| Q |
12 |
atgaagctggtggaggagatgccagatatgcaattgcaagatcataccaaaaggcttagacaacattgttttaaggccaattacaagaaaa |
102 |
Q |
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| T |
2948 |
atgaagctggtggaggagatgccagatatgcaattgcaagatcataccaaaaggcttagacaacattgttttaaggccaattacaagaaaa |
3038 |
T |
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