View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2543_low_8 (Length: 252)

Name: NF2543_low_8
Description: NF2543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2543_low_8
NF2543_low_8
[»] chr2 (24 HSPs)
chr2 (11-139)||(3832199-3832327)
chr2 (168-252)||(3832117-3832201)
chr2 (15-67)||(2265346-2265398)
chr2 (11-67)||(29182167-29182223)
chr2 (15-67)||(45442645-45442697)
chr2 (11-68)||(17912447-17912504)
chr2 (15-68)||(29865460-29865513)
chr2 (11-68)||(38639410-38639467)
chr2 (15-67)||(25954114-25954166)
chr2 (15-67)||(41693673-41693725)
chr2 (15-67)||(43672267-43672319)
chr2 (15-68)||(10671890-10671943)
chr2 (15-68)||(11788365-11788418)
chr2 (15-68)||(23989836-23989889)
chr2 (15-68)||(43592044-43592097)
chr2 (15-67)||(3172481-3172533)
chr2 (15-67)||(19183781-19183833)
chr2 (15-63)||(23990145-23990193)
chr2 (10-70)||(26239104-26239164)
chr2 (11-67)||(31644840-31644896)
chr2 (11-67)||(37228732-37228788)
chr2 (15-67)||(43597448-43597500)
chr2 (15-67)||(43710657-43710709)
chr2 (15-75)||(44985933-44985993)
[»] chr5 (22 HSPs)
chr5 (15-70)||(42207238-42207293)
chr5 (11-65)||(22551264-22551318)
chr5 (15-68)||(10744003-10744056)
chr5 (15-68)||(14318043-14318096)
chr5 (15-67)||(9179592-9179644)
chr5 (16-68)||(23381948-23382000)
chr5 (15-67)||(29693039-29693091)
chr5 (15-67)||(38496731-38496783)
chr5 (10-77)||(19565456-19565523)
chr5 (15-66)||(21050575-21050626)
chr5 (11-66)||(42553642-42553697)
chr5 (11-73)||(31037686-31037748)
chr5 (10-76)||(35876678-35876744)
chr5 (16-66)||(38962806-38962856)
chr5 (11-64)||(16038685-16038738)
chr5 (11-68)||(20690731-20690788)
chr5 (15-68)||(36577720-36577773)
chr5 (15-68)||(39379559-39379612)
chr5 (18-67)||(40029140-40029189)
chr5 (15-67)||(4736491-4736543)
chr5 (15-67)||(26133362-26133414)
chr5 (15-67)||(38786158-38786210)
[»] chr7 (19 HSPs)
chr7 (10-68)||(30709588-30709646)
chr7 (15-67)||(6911081-6911133)
chr7 (11-66)||(21223405-21223460)
chr7 (11-68)||(31310363-31310420)
chr7 (15-67)||(44958455-44958507)
chr7 (15-66)||(1974009-1974060)
chr7 (12-63)||(37952997-37953048)
chr7 (15-66)||(44403198-44403249)
chr7 (15-68)||(18022653-18022706)
chr7 (11-68)||(23816668-23816725)
chr7 (11-76)||(35469870-35469935)
chr7 (15-68)||(39832904-39832957)
chr7 (15-67)||(5234153-5234205)
chr7 (15-67)||(6509419-6509471)
chr7 (15-63)||(30709328-30709376)
chr7 (18-66)||(32189076-32189124)
chr7 (16-68)||(38486476-38486528)
chr7 (15-67)||(44344738-44344790)
chr7 (15-67)||(48854019-48854071)
[»] chr4 (29 HSPs)
chr4 (11-68)||(22584285-22584342)
chr4 (12-69)||(28448831-28448888)
chr4 (15-67)||(13764756-13764808)
chr4 (11-67)||(22099857-22099913)
chr4 (10-66)||(25358484-25358540)
chr4 (15-67)||(52442041-52442093)
chr4 (19-66)||(9446276-9446323)
chr4 (15-66)||(28809011-28809062)
chr4 (15-74)||(35415291-35415350)
chr4 (15-69)||(13479560-13479614)
chr4 (15-68)||(9289264-9289317)
chr4 (15-64)||(18831127-18831176)
chr4 (11-68)||(20291984-20292041)
chr4 (15-64)||(30564835-30564884)
chr4 (15-64)||(43368467-43368516)
chr4 (15-68)||(46088009-46088062)
chr4 (11-68)||(51708691-51708748)
chr4 (15-68)||(53716919-53716972)
chr4 (15-67)||(6827545-6827597)
chr4 (15-67)||(6827823-6827875)
chr4 (15-67)||(8760730-8760782)
chr4 (15-67)||(24474912-24474964)
chr4 (15-67)||(29380859-29380911)
chr4 (15-67)||(34361802-34361854)
chr4 (15-67)||(41620205-41620257)
chr4 (15-67)||(41921033-41921085)
chr4 (16-68)||(42823774-42823826)
chr4 (11-67)||(45474541-45474597)
chr4 (15-67)||(55072388-55072440)
[»] chr8 (21 HSPs)
chr8 (15-65)||(30969399-30969449)
chr8 (11-68)||(18549199-18549256)
chr8 (10-67)||(24187841-24187898)
chr8 (15-68)||(28398984-28399037)
chr8 (15-68)||(32040073-32040126)
chr8 (11-67)||(7272419-7272475)
chr8 (15-67)||(9175011-9175063)
chr8 (15-70)||(8094790-8094845)
chr8 (15-66)||(29487750-29487801)
chr8 (16-67)||(38930301-38930352)
chr8 (10-76)||(3512210-3512276)
chr8 (10-67)||(2728231-2728288)
chr8 (10-67)||(4017244-4017301)
chr8 (15-68)||(29158352-29158405)
chr8 (15-68)||(33526361-33526414)
chr8 (15-68)||(33636320-33636373)
chr8 (11-67)||(1525808-1525864)
chr8 (15-67)||(14238750-14238802)
chr8 (16-68)||(19494117-19494169)
chr8 (15-67)||(20984459-20984511)
chr8 (15-67)||(28324130-28324182)
[»] chr3 (28 HSPs)
chr3 (16-66)||(275783-275833)
chr3 (11-68)||(20757720-20757777)
chr3 (11-68)||(45313498-45313555)
chr3 (15-68)||(46622078-46622131)
chr3 (11-67)||(20611019-20611075)
chr3 (11-67)||(39288572-39288628)
chr3 (11-67)||(46186716-46186772)
chr3 (14-64)||(16679678-16679728)
chr3 (10-68)||(28452320-28452378)
chr3 (11-69)||(29490688-29490746)
chr3 (15-77)||(45320928-45320990)
chr3 (11-68)||(863279-863336)
chr3 (15-76)||(3152060-3152121)
chr3 (15-68)||(15979650-15979703)
chr3 (15-68)||(28452145-28452198)
chr3 (15-68)||(29446155-29446208)
chr3 (15-68)||(34238596-34238649)
chr3 (15-68)||(51834891-51834944)
chr3 (15-67)||(5345638-5345690)
chr3 (15-67)||(22008525-22008577)
chr3 (15-67)||(22016043-22016095)
chr3 (15-67)||(26799887-26799939)
chr3 (16-68)||(30130156-30130208)
chr3 (15-67)||(30268504-30268556)
chr3 (11-67)||(35177254-35177310)
chr3 (15-67)||(39436717-39436769)
chr3 (15-67)||(43440494-43440546)
chr3 (15-67)||(47114486-47114538)
[»] chr1 (29 HSPs)
chr1 (11-68)||(4617340-4617397)
chr1 (11-68)||(26324892-26324949)
chr1 (11-67)||(15211510-15211566)
chr1 (15-63)||(20756022-20756070)
chr1 (15-66)||(34383193-34383244)
chr1 (10-68)||(10887231-10887289)
chr1 (10-68)||(13260265-13260323)
chr1 (11-65)||(37624972-37625026)
chr1 (14-68)||(48955712-48955766)
chr1 (15-68)||(7867127-7867180)
chr1 (10-75)||(15526306-15526371)
chr1 (15-68)||(19622653-19622706)
chr1 (15-68)||(21383102-21383155)
chr1 (15-68)||(21391094-21391147)
chr1 (19-68)||(33067346-33067395)
chr1 (15-68)||(48609543-48609596)
chr1 (15-68)||(50429158-50429211)
chr1 (15-67)||(990087-990139)
chr1 (15-67)||(3679625-3679677)
chr1 (15-67)||(3753521-3753573)
chr1 (15-67)||(6567445-6567497)
chr1 (15-67)||(14007488-14007540)
chr1 (14-66)||(17984649-17984701)
chr1 (15-67)||(31258338-31258390)
chr1 (15-67)||(34002889-34002941)
chr1 (16-68)||(41358613-41358665)
chr1 (15-67)||(41881092-41881144)
chr1 (15-67)||(45290456-45290508)
chr1 (11-67)||(46868225-46868281)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-68)||(10465-10517)
[»] chr6 (15 HSPs)
chr6 (15-67)||(11448536-11448588)
chr6 (16-67)||(25431575-25431626)
chr6 (18-68)||(543676-543726)
chr6 (10-68)||(15962025-15962083)
chr6 (15-68)||(318046-318099)
chr6 (10-67)||(3414696-3414753)
chr6 (15-64)||(14428899-14428948)
chr6 (15-68)||(14655377-14655430)
chr6 (15-68)||(25431803-25431856)
chr6 (15-67)||(6468309-6468361)
chr6 (15-67)||(9896586-9896638)
chr6 (15-63)||(10091039-10091087)
chr6 (15-67)||(14656209-14656261)
chr6 (15-67)||(30928680-30928732)
chr6 (15-67)||(31398490-31398542)
[»] scaffold0326 (2 HSPs)
scaffold0326 (15-68)||(4039-4092)
scaffold0326 (15-68)||(19221-19274)
[»] scaffold0160 (1 HSPs)
scaffold0160 (15-76)||(27313-27374)
[»] scaffold0811 (1 HSPs)
scaffold0811 (15-67)||(1310-1362)
[»] scaffold0373 (1 HSPs)
scaffold0373 (15-67)||(8546-8598)
[»] scaffold0370 (1 HSPs)
scaffold0370 (15-67)||(238-290)
[»] scaffold0204 (1 HSPs)
scaffold0204 (16-64)||(17126-17174)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-67)||(54814-54866)
[»] scaffold0051 (2 HSPs)
scaffold0051 (11-67)||(5398-5454)
scaffold0051 (15-67)||(5657-5709)


Alignment Details
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 3832327 - 3832199
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaagcatcctgttccgtaatttgaaacctcgtctaat 110  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3832327 cagaggctaaaaccaaaaccaaacatatttacaagaactaaaatcatattttagcctagattttatgcatcctgtttcgtaatttgaaacctcgtctaat 3832228  T
Q  111 ccattctcgttcttataataaacataata 139  Q
    |||||||||||||||||||||||||||||    
T  3832227 ccattctcgttcttataataaacataata 3832199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 3832201 - 3832117
Alignment:
Q  168 atagtatttcaacgttttgcacctgacaagtcacaactagtactgaaataatatcatcatgatatatacgggcaggcattgtagt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3832201 atagtatttcaacgttttgcacctgacaagtcacaactagtactgaaataatatcatcatgatatatacgggcaggcattgtagt 3832117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 2265346 - 2265398
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||||    
T  2265346 gactaaaaccaaaacgagacatatttgcaaggactaaaatcatattttagcct 2265398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29182223 - 29182167
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||  ||||||||||  |||||| ||||||||||||||||||    
T  29182223 cagagactaaaaccaaaatgaaacatatttgcaaggaccaaaatcatattttagcct 29182167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 45442645 - 45442697
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||||    
T  45442645 gactaaaaccaaaacgagacatatttgcaaggactaaaatcatattttagcct 45442697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 17912504 - 17912447
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| | ||||||||  | ||||||||||||||||||| ||||    
T  17912504 cagagactaaaaccaaaacgagacatatttgcagggactaaaatcatattttaaccta 17912447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 29865460 - 29865513
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  ||||||||||| ||||||||||||||    
T  29865460 gactaaaaccaaaacgaagcatatttgcaaggactaaaaccatattttagccta 29865513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 38639467 - 38639410
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  38639467 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 38639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 25954166 - 25954114
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | ||||||||| |||||||||||||    
T  25954166 gactaaaaccaaaacgaaacatatttgcagggactaaaaacatattttagcct 25954114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 41693725 - 41693673
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | ||||||||| |||||||||||||    
T  41693725 gactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttagcct 41693673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 43672267 - 43672319
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||||    
T  43672267 gactaaaaccaaaacaaaacatatttgcagggaccaaaatcatattttagcct 43672319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 10671890 - 10671943
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  10671890 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 10671943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 11788365 - 11788418
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  11788365 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 11788418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 23989889 - 23989836
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  23989889 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccta 23989836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 43592097 - 43592044
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| |  |||||||  ||||||||||| ||||||||||||||    
T  43592097 gactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagccta 43592044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3172481 - 3172533
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  |||||| ||||||||||||||||||    
T  3172481 gactaaaaccaaaacgaggcatatttgcaaggaccaaaatcatattttagcct 3172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19183833 - 19183781
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  19183833 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 19183781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 23990145 - 23990193
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatatttta 63  Q
    ||||||||||||||| | ||||||||  ||||||||||| |||||||||    
T  23990145 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatatttta 23990193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 26239104 - 26239164
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctaga 70  Q
    |||| |||||||| |||||| | ||||||||  | ||||||||| ||||||||||||||||    
T  26239104 gcagggactaaaatcaaaacgagacatatttgcagggactaaaaccatattttagcctaga 26239164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 31644896 - 31644840
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||  | |||| |||| |||||||||||||    
T  31644896 cagagactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcct 31644840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 37228788 - 37228732
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||  | |||| |||| |||||||||||||    
T  37228788 cagagactaaaaccaaaacgatacatatttgcagggaccaaaaccatattttagcct 37228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 43597448 - 43597500
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | |||||||   | |||||||||||||||||||||||    
T  43597448 gactaaaaccaaaacgagacatattagcagggactaaaatcatattttagcct 43597500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 43710657 - 43710709
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  |||| ||||||||||||||||||||    
T  43710657 gactaaaaccaaaacgaggcatatttgcaagggctaaaatcatattttagcct 43710709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 44985933 - 44985993
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagatttta 75  Q
    ||||||||||||||| | ||||||||  | ||| ||||| |||||||||||||| ||||||    
T  44985933 gactaaaaccaaaacgagacatatttgcagggattaaaaccatattttagcctaaatttta 44985993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 42207293 - 42207238
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctaga 70  Q
    ||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||    
T  42207293 gactaaaaccaaaacgagacatatttacaaggactaaaaccatattttagcctaga 42207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 22551264 - 22551318
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagc 65  Q
    ||||||||||||||||||| ||||||||||| |  |||||||| |||||||||||    
T  22551264 cagagactaaaaccaaaacaaaacatatttacagagactaaaaccatattttagc 22551318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 10744003 - 10744056
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  ||||||||||| ||||||||||||||    
T  10744003 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 10744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 14318096 - 14318043
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  ||||||||||| ||||||||||||||    
T  14318096 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 14318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 9179644 - 9179592
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  ||||||||||| |||||||||||||    
T  9179644 gactaaaaccaaaacgaatcatatttgcaaggactaaaaccatattttagcct 9179592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 23382000 - 23381948
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||||| ||||||||  | ||||||||| ||||||||||||||    
T  23382000 actaaaaccaaaaccagacatatttgcagggactaaaaccatattttagccta 23381948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29693039 - 29693091
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  | |||||||||||||||||||||||    
T  29693039 gactaaaaccaaaacgaagcatatttgcagggactaaaatcatattttagcct 29693091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 38496731 - 38496783
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | ||||||||| |||||||||||||    
T  38496731 gactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttagcct 38496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 19565523 - 19565456
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaag 77  Q
    |||| ||||||||||||||| | ||||||||  | |||| |||| ||||||||||||| |||||||||    
T  19565523 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccttgattttaag 19565456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 21050626 - 21050575
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||||||| |||||| || ||||||| || ||||||||||||||||||||||    
T  21050626 gactaaaatcaaaacgaagcatatttgtagggactaaaatcatattttagcc 21050575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 42553697 - 42553642
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||||||| | ||||||||  | |||| |||||||||||||||||    
T  42553697 cagagactaaaaccaaaacgagacatatttgcagggaccaaaatcatattttagcc 42553642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 31037686 - 31037748
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattt 73  Q
    |||||| |||||||||||| | ||||||||  | ||||||||| |||||||||||||| ||||    
T  31037686 cagagaataaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaattt 31037748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 35876744 - 35876678
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaa 76  Q
    |||| ||||||||||||||| || |||||||  | |||| |||| ||||||||||||| ||||||||    
T  35876744 gcagggactaaaaccaaaacgaagcatatttgcagggaccaaaaccatattttagccttgattttaa 35876678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 38962856 - 38962806
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||||||||||||| | ||||||||| | ||||||||| ||||||||||||    
T  38962856 actaaaaccaaaacgagacatatttacagggactaaaaccatattttagcc 38962806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 16038685 - 16038738
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    ||||||||||||||||||| |  |||||||  | ||||||||||||||||||||    
T  16038685 cagagactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttag 16038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 20690788 - 20690731
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| | ||||||||  | |||| |||| ||||||||||||||    
T  20690788 cagagactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccta 20690731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 36577773 - 36577720
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  36577773 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 36577720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 39379559 - 39379612
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||    
T  39379559 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagccta 39379612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 40029189 - 40029140
Alignment:
Q  18 taaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||||||||||| | ||||||||| | ||||||||| |||||||||||||    
T  40029189 taaaaccaaaacgagacatatttacagggactaaaaccatattttagcct 40029140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 4736491 - 4736543
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | |||| |||| |||||||||||||    
T  4736491 gactaaaaccaaaacgaaacatatttgcagggaccaaaaccatattttagcct 4736543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 26133362 - 26133414
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  26133362 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 26133414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 38786210 - 38786158
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  | ||||||||| |||||||||||||    
T  38786210 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcct 38786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 30709588 - 30709646
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||||||||| | ||||||||  | ||||||||||||||||||||||||    
T  30709588 gcagagactaaaaccaaaacgagacatatttgcagggactaaaatcatattttagccta 30709646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 6911133 - 6911081
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  6911133 gactaaaatcaaaacgagacatatttataaggaccaaaatcatattttagcct 6911081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 21223460 - 21223405
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||||||| || |||||||  | ||||||||||||||||||||||    
T  21223460 cagagactaaaaccaaaacgaagcatatttgcagggactaaaatcatattttagcc 21223405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 31310420 - 31310363
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| | | ||||||  | ||||||||||||||||||||||||    
T  31310420 cagagactaaaaccaaaacgagaaatatttgcagggactaaaatcatattttagccta 31310363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 44958455 - 44958507
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | |||||||| || |||| ||||||||||||||||||    
T  44958455 gactaaaaccaaaacgagacatatttgtagggaccaaaatcatattttagcct 44958507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 1974060 - 1974009
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||| ||||||||||  | ||||||||| ||||||||||||    
T  1974060 gactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttagcc 1974009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 37952997 - 37953048
Alignment:
Q  12 agagactaaaaccaaaaccaaacatatttataaggactaaaatcatatttta 63  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||||    
T  37952997 agagactaaaaccaaaacaagacatatttacagggactaaaaccatatttta 37953048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 44403198 - 44403249
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||| | ||||||||  ||||||||||| ||||||||||||    
T  44403198 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagcc 44403249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 18022653 - 18022706
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  18022653 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccta 18022706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 23816725 - 23816668
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |  |||||||  | ||||||||| ||||||||||||||    
T  23816725 cagagactaaaaccaaaacgagccatatttgcagggactaaaaccatattttagccta 23816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 35469935 - 35469870
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaa 76  Q
    ||||||||||||||||||| ||||||||||  | |||  |||| ||||||||||||  ||||||||    
T  35469935 cagagactaaaaccaaaacgaaacatatttgcagggatcaaaaccatattttagccatgattttaa 35469870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 39832957 - 39832904
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  39832957 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 39832904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 5234153 - 5234205
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | |||||||| || |||| |||| |||||||||||||    
T  5234153 gactaaaaccaaaacgagacatatttgtagggaccaaaaccatattttagcct 5234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 6509419 - 6509471
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  ||||||| || ||||||||| |||||||||||||    
T  6509419 gactaaaaccaaaacgaggcatatttgtagggactaaaaccatattttagcct 6509471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 30709376 - 30709328
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatatttta 63  Q
    ||||||||||||||| |  ||||||| || |||||||||||||||||||    
T  30709376 gactaaaaccaaaacgaggcatatttgtagggactaaaatcatatttta 30709328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 32189124 - 32189076
Alignment:
Q  18 taaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||||||||||| || |||||||  | ||||||||||||||||||||||    
T  32189124 taaaaccaaaacgaagcatatttgcagggactaaaatcatattttagcc 32189076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 38486528 - 38486476
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||| ||||| | ||||||||| | |||| |||||||||||||||||||    
T  38486528 actaaaactaaaacgagacatatttacagggaccaaaatcatattttagccta 38486476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 44344738 - 44344790
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  44344738 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 44344790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 48854019 - 48854071
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | |||  ||||||||||||||||||    
T  48854019 gactaaaaccaaaacgaaacatatttgcagggatcaaaatcatattttagcct 48854071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 22584342 - 22584285
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| | ||||||||  ||||||||||| ||||||||||||||    
T  22584342 cagagactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 22584285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 28448888 - 28448831
Alignment:
Q  12 agagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctag 69  Q
    |||||||||||||||||| |  ||||||| |||||||||||| |||||||||||||||    
T  28448888 agagactaaaaccaaaacgaggcatatttgtaaggactaaaaccatattttagcctag 28448831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13764756 - 13764808
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||| | |||| |||| |||||||||||||    
T  13764756 gactaaaaccaaaacgaaacatatttacagggaccaaaaccatattttagcct 13764808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 22099857 - 22099913
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  22099857 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 22099913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 25358484 - 25358540
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||| ||||||||||||||| | ||||||||| | |||| |||||||||||||||||    
T  25358484 gcagggactaaaaccaaaacgagacatatttacagggaccaaaatcatattttagcc 25358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 52442041 - 52442093
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  ||||||||||| |||||||||||||    
T  52442041 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagcct 52442093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 9446276 - 9446323
Alignment:
Q  19 aaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||| | ||||||||| | ||||||||||||||||||||||    
T  9446276 aaaaccaaaacgagacatatttacagggactaaaatcatattttagcc 9446323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 28809062 - 28809011
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||| | ||||||||  ||||||||||| ||||||||||||    
T  28809062 gactaaaaccaaaacgatacatatttgcaaggactaaaaccatattttagcc 28809011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 35415350 - 35415291
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagatttt 74  Q
    ||||||||||||||| |  |||||||| | ||||||||| |||||||||||||| |||||    
T  35415350 gactaaaaccaaaacgatgcatatttacagggactaaaaccatattttagcctatatttt 35415291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13479560 - 13479614
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctag 69  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||||    
T  13479560 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctag 13479614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 9289317 - 9289264
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  9289317 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 9289264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 18831127 - 18831176
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    ||||||||||||||| | ||||||||| | ||||||||| ||||||||||    
T  18831127 gactaaaaccaaaacaagacatatttacagggactaaaaccatattttag 18831176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 20292041 - 20291984
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |  |||||||  | |||| |||||||||||||||||||    
T  20292041 cagagactaaaaccaaaacgaggcatatttgcagggaccaaaatcatattttagccta 20291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 30564884 - 30564835
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    ||||||||||||||| ||||||||||  | ||||||||| ||||||||||    
T  30564884 gactaaaaccaaaacaaaacatatttgcagggactaaaaccatattttag 30564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 43368516 - 43368467
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    ||||||||||||||| ||||||||||  | ||||||||| ||||||||||    
T  43368516 gactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttag 43368467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 46088009 - 46088062
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  46088009 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 46088062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 51708748 - 51708691
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |  |||||||  | ||||||||| ||||||||||||||    
T  51708748 cagagactaaaaccaaaacgagccatatttgcagggactaaaaccatattttagccta 51708691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 53716972 - 53716919
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  53716972 gactaaaaccaaaacaagacatatttgcagggactaaaaccatattttagccta 53716919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 6827597 - 6827545
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  ||||||||||| |||||||||||||    
T  6827597 gactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcct 6827545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 6827823 - 6827875
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  | |||||||||||||||||||||||    
T  6827823 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagcct 6827875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 8760730 - 8760782
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  ||||||||||| |||||||||||||    
T  8760730 gactaaaaccaaaacgagccatatttgcaaggactaaaaccatattttagcct 8760782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 24474912 - 24474964
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  24474912 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 24474964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29380859 - 29380911
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  29380859 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 29380911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 34361854 - 34361802
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  34361854 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 34361802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 41620205 - 41620257
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||| | ||||||||| |||||||||||||    
T  41620205 gactaaaaccaaaacgatgcatatttacagggactaaaaccatattttagcct 41620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 41921033 - 41921085
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| ||||||||||  | || |||||| |||||||||||||    
T  41921033 gactaaaaccaaaacgaaacatatttgcaggggctaaaaccatattttagcct 41921085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 42823826 - 42823774
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||| | ||||||||  | |||| |||||||||||||||||||    
T  42823826 actaaaaccaaaacgagacatatttgcagggaccaaaatcatattttagccta 42823774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 45474541 - 45474597
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||| | || |||||||  | ||||||||| |||||||||||||    
T  45474541 cagagactaaaaccaaagcgaagcatatttgcagggactaaaaccatattttagcct 45474597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 55072440 - 55072388
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  | ||||||||| |||||||||||||    
T  55072440 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcct 55072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 30969449 - 30969399
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagc 65  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||    
T  30969449 gactaaaaccaaaacgaaacatatttgtaaggaccaaaaccatattttagc 30969399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 18549256 - 18549199
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| || |||||||  | ||||||||| ||||||||||||||    
T  18549256 cagagactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagccta 18549199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 24187841 - 24187898
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||| ||||||||||||||| | ||||||||  | |||||||||||||||||||||||    
T  24187841 gcagggactaaaaccaaaacgagacatatttgcagggactaaaatcatattttagcct 24187898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 28398984 - 28399037
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  | ||||||||||||||||||||||||    
T  28398984 gactaaaaccaaaacgaaccatatttgcagggactaaaatcatattttagccta 28399037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 32040126 - 32040073
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| ||||||||||  | ||||||| ||||||||||||||||    
T  32040126 gactaaaaccaaaacgaaacatatttgcagggactaagatcatattttagccta 32040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 7272475 - 7272419
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  7272475 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 7272419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 9175063 - 9175011
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  |||||| ||||||||||||||||||    
T  9175063 gactaaaaccaaaacgagacatatttgcaaggaccaaaatcatattttagcct 9175011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 8094790 - 8094845
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctaga 70  Q
    ||||||||||||||| |  |||||||  ||||||||||| ||||||||||||||||    
T  8094790 gactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcctaga 8094845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 29487801 - 29487750
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||| ||||||||||  | |||| |||||||||||||||||    
T  29487801 gactaaaaccaaaacgaaacatatttgcagggacgaaaatcatattttagcc 29487750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 38930352 - 38930301
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||||||||||||| | ||||||||| | ||||||||| |||||||||||||    
T  38930352 actaaaaccaaaacgagacatatttacagggactaaaaccatattttagcct 38930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 3512210 - 3512276
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaa 76  Q
    |||| ||||||||||||||| | ||||||||  | |||| |||| |||||||||||||| |||||||    
T  3512210 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctaaattttaa 3512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 2728288 - 2728231
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||| ||||||||||||||| | ||||||||  | |||| ||||||||||||||||||    
T  2728288 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaatcatattttagcct 2728231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 4017244 - 4017301
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||| ||||||||||||||| |  |||||||  ||||||||||| |||||||||||||    
T  4017244 gcagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcct 4017301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 29158405 - 29158352
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  29158405 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 29158352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 33526361 - 33526414
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  33526361 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccta 33526414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 33636373 - 33636320
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||    
T  33636373 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagccta 33636320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 1525864 - 1525808
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| |  |||||||  | ||||||||| |||||||||||||    
T  1525864 cagagactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcct 1525808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 14238802 - 14238750
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  14238802 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 14238750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19494169 - 19494117
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  19494169 actaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 19494117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 20984459 - 20984511
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | |||||||| || |||| |||| |||||||||||||    
T  20984459 gactaaaaccaaaacgagacatatttgtagggaccaaaaccatattttagcct 20984511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 28324130 - 28324182
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | |||||||| || |||| |||| |||||||||||||    
T  28324130 gactaaaaccaaaacaagacatatttgtagggaccaaaaccatattttagcct 28324182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 275783 - 275833
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||||||||||||| || |||||||| | ||||||||||||||||||||||    
T  275783 actaaaaccaaaacgaagcatatttacagggactaaaatcatattttagcc 275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 20757720 - 20757777
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |  |||||||| | ||| ||||||||||||||||||||    
T  20757720 cagagactaaaaccaaaacgatgcatatttacagggattaaaatcatattttagccta 20757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 45313555 - 45313498
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||| ||||||| |||||| || |||||||| |||||| |||||||||||||||||||    
T  45313555 cagatactaaaatcaaaacgaatcatatttacaaggaccaaaatcatattttagccta 45313498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 46622078 - 46622131
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| ||||||||||  |||||| |||| ||||||||||||||    
T  46622078 gactaaaaccaaaacgaaacatatttgcaaggaccaaaaccatattttagccta 46622131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 20611075 - 20611019
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| || |||||||  | ||||||||| |||||||||||||    
T  20611075 cagagactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcct 20611019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 39288628 - 39288572
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  39288628 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 39288572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 46186716 - 46186772
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| |  |||||||  ||||||||||| |||||||||||||    
T  46186716 cagagactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcct 46186772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 16679728 - 16679678
Alignment:
Q  14 agactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    |||||||||||||||| || |||||||  ||||||||||| ||||||||||    
T  16679728 agactaaaaccaaaacgaagcatattttcaaggactaaaaccatattttag 16679678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 28452320 - 28452378
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||| ||||||||||||||| || ||||||| || |||| |||| ||||||||||||||    
T  28452320 gcagggactaaaaccaaaacgaagcatatttgtagggaccaaaaccatattttagccta 28452378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 29490688 - 29490746
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctag 69  Q
    ||||||||||||||||||| | ||||||||  | |||| |||| |||||||||||||||    
T  29490688 cagagactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctag 29490746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 45320928 - 45320990
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaag 77  Q
    ||||||||||||||| |  |||||||  | |||||||||||||||||||||||  ||||||||    
T  45320928 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccttaattttaag 45320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 863336 - 863279
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||| ||||| | ||||||||  | |||| |||||||||||||||||||    
T  863336 cagagactaaaactaaaacgagacatatttgcatggaccaaaatcatattttagccta 863279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 3152060 - 3152121
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaa 76  Q
    ||||||||||||||| |  |||||||  | ||||||||| |||||||||||||| |||||||    
T  3152060 gactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaattttaa 3152121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 15979650 - 15979703
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | |||||||| || |||| |||| ||||||||||||||    
T  15979650 gactaaaaccaaaacgagacatatttgtagggaccaaaaccatattttagccta 15979703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 28452198 - 28452145
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  |||||| |||| ||||||||||||||    
T  28452198 gactaaaaccaaaacaagacatatttgcaaggaccaaaaccatattttagccta 28452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 29446155 - 29446208
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  29446155 gactaaaaccaaaacaagacatatttgcagggactaaaaccatattttagccta 29446208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 34238649 - 34238596
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  34238649 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 34238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 51834891 - 51834944
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||    
T  51834891 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagccta 51834944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 5345638 - 5345690
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  | ||||||||| |||||||||||||    
T  5345638 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcct 5345690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 22008577 - 22008525
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  22008577 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 22008525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 22016095 - 22016043
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  22016095 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 22016043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 26799939 - 26799887
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||| | ||||||||| |||||||||||||    
T  26799939 gactaaaaccaaaacgaggcatatttacagggactaaaaccatattttagcct 26799887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 30130208 - 30130156
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  30130208 actaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 30130156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 30268556 - 30268504
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  | |||||||||||||||||||||||    
T  30268556 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagcct 30268504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 35177310 - 35177254
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||| |||||||||||||| | ||||||||  | |||| ||||||||||||||||||    
T  35177310 cagaaactaaaaccaaaacgagacatatttgcagggaccaaaatcatattttagcct 35177254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 39436769 - 39436717
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  39436769 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 39436717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 43440546 - 43440494
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||| ||||| | ||||||||  ||||||||||| |||||||||||||    
T  43440546 gactaaaactaaaacgagacatatttgcaaggactaaaaccatattttagcct 43440494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 47114538 - 47114486
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | |||| ||||||||||||||||||    
T  47114538 gactaaaaccaaaacgagacatatttgcagggaccaaaatcatattttagcct 47114486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 4617340 - 4617397
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |||||||||| |  | || |||||||||||||||||||    
T  4617340 cagagactaaaaccaaaacgaaacatatttgttggaaccaaaatcatattttagccta 4617397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 26324892 - 26324949
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  26324892 cagagactaaaaccaaaacgaggcatatttgcatggactaaaatcatattttagccta 26324949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 15211566 - 15211510
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| | ||||||||| | |||| |||| |||||||||||||    
T  15211566 cagagactaaaaccaaaacgagacatatttacagggaccaaaaccatattttagcct 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 20756070 - 20756022
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatatttta 63  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||||    
T  20756070 gactaaaaccaaaacgagacatatttacaaggattaaaatcatatttta 20756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 34383193 - 34383244
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    ||||||||||||||| | ||||||||| | | ||||||||||||||||||||    
T  34383193 gactaaaaccaaaacaatacatatttacaggaactaaaatcatattttagcc 34383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 10887289 - 10887231
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||| ||||||||||||||| ||||||||||  | |||| |||| ||||||||||||||    
T  10887289 gcagggactaaaaccaaaacgaaacatatttgcagggaccaaaaccatattttagccta 10887231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 13260265 - 13260323
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||| ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  13260265 gcagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 13260323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 37624972 - 37625026
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagc 65  Q
    ||||||||| ||||||||| | ||||||||| | ||||||||| |||||||||||    
T  37624972 cagagactacaaccaaaacgatacatatttacagggactaaaaccatattttagc 37625026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 48955766 - 48955712
Alignment:
Q  14 agactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  48955766 agactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccta 48955712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 7867180 - 7867127
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||| ||||| | ||||||||  ||||||||||| ||||||||||||||    
T  7867180 gactaaaactaaaacgagacatatttgcaaggactaaaaccatattttagccta 7867127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 15526306 - 15526371
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagatttta 75  Q
    |||| ||||||||||||||| | ||||||||  | |||| |||| ||||||||||||| |||||||    
T  15526306 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccttgatttta 15526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 19622706 - 19622653
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  19622706 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 19622653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 21383155 - 21383102
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | |||||||   | ||||||||||||||||||||||||    
T  21383155 gactaaaaccaaaacgagacatattagcagggactaaaatcatattttagccta 21383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 21391147 - 21391094
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  21391147 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 21391094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33067395 - 33067346
Alignment:
Q  19 aaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||| | ||||||||  ||||||||||| ||||||||||||||    
T  33067395 aaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 33067346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 48609543 - 48609596
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  48609543 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 48609596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 50429158 - 50429211
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| |  |||||||  | ||||||||||||||||||||||||    
T  50429158 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagccta 50429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 990139 - 990087
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  ||||||| || ||||||||| |||||||||||||    
T  990139 gactaaaaccaaaacgaggcatatttgtagggactaaaaccatattttagcct 990087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 3679677 - 3679625
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  ||||||| || ||||||||| |||||||||||||    
T  3679677 gactaaaaccaaaacgaggcatatttgtagggactaaaaccatattttagcct 3679625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3753521 - 3753573
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||| | ||||||||| |||||||||||||    
T  3753521 gactaaaaccaaaacgaggcatatttacagggactaaaaccatattttagcct 3753573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 6567445 - 6567497
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  6567445 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 6567497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 14007540 - 14007488
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  14007540 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 14007488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 17984649 - 17984701
Alignment:
Q  14 agactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcc 66  Q
    |||||||||||||||| |  |||||||  | ||||||||||||||||||||||    
T  17984649 agactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagcc 17984701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 31258390 - 31258338
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||| | ||||||||| |||||||||||||    
T  31258390 gactaaaaccaaaacgaggcatatttacagggactaaaaccatattttagcct 31258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 34002889 - 34002941
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  34002889 gactaaaaccaaaacaagacatatttgcagggactaaaaccatattttagcct 34002941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 41358613 - 41358665
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  41358613 actaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 41358665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 41881144 - 41881092
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  41881144 gactaaaaccaaaacgagacatatttggagggactaaaaccatattttagcct 41881092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 45290508 - 45290456
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  45290508 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 45290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 46868281 - 46868225
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||  || |||||||  | |||||||||||||| ||||||||    
T  46868281 cagagactaaaaccaaaatgaagcatatttgcagggactaaaatcataatttagcct 46868225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 10465 - 10517
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||||||| ||||||||  | ||||||||| ||||||||||||||    
T  10465 actaaaaccaaaaccagacatatttgcagggactaaaaccatattttagccta 10517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 11448588 - 11448536
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | |||||||||||||||||||||||    
T  11448588 gactaaaaccaaaacgagacatatttgcagggactaaaatcatattttagcct 11448536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 25431626 - 25431575
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||| |||||| ||||||||||| | ||| |||||||||||||||||||    
T  25431626 actaaaatcaaaacgaaacatatttacagggattaaaatcatattttagcct 25431575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 543676 - 543726
Alignment:
Q  18 taaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||||||||||| || |||||||  | ||||||||||||||||||||||||    
T  543676 taaaaccaaaacaaagcatatttgcagggactaaaatcatattttagccta 543726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 15962083 - 15962025
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    |||| ||||||||||||||| |  |||||||  ||||||||||| ||||||||||||||    
T  15962083 gcagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagccta 15962025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 318046 - 318099
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| ||||||||||  | ||| ||||| ||||||||||||||    
T  318046 gactaaaaccaaaacgaaacatatttgcagggattaaaaccatattttagccta 318099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 3414696 - 3414753
Alignment:
Q  10 gcagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    |||| ||||||||||||||| | ||||||||| | |||| |||| |||||||||||||    
T  3414696 gcagggactaaaaccaaaacgagacatatttacagggaccaaaaccatattttagcct 3414753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 14428899 - 14428948
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    ||||||||||||||| || |||||||  ||||||||||| ||||||||||    
T  14428899 gactaaaaccaaaacgaagcatatttgcaaggactaaaaccatattttag 14428948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 14655430 - 14655377
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||    
T  14655430 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagccta 14655377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 25431803 - 25431856
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  25431803 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 25431856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 6468361 - 6468309
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| || |||||||  | ||||||||| |||||||||||||    
T  6468361 gactaaaaccaaaacaaagcatatttgcagggactaaaaccatattttagcct 6468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 9896586 - 9896638
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  9896586 gactaaaaccaaaacaagacatatttgcagggactaaaaccatattttagcct 9896638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 10091087 - 10091039
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatatttta 63  Q
    ||||||||||||||| ||||||||||  | ||||||||| |||||||||    
T  10091087 gactaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 10091039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 14656209 - 14656261
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  |||||| |||| |||||||||||||    
T  14656209 gactaaaaccaaaacgagacatatttgcaaggaccaaaaccatattttagcct 14656261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 30928732 - 30928680
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  30928732 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 30928680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 31398490 - 31398542
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||  | ||||||||  | |||||||||||||||||||||||    
T  31398490 gactaaaaccaaaatgagacatatttgcagggactaaaatcatattttagcct 31398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 4092 - 4039
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  4092 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 4039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 19274 - 19221
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagccta 68  Q
    ||||||||||||||| | ||||||||  | ||||||||| ||||||||||||||    
T  19274 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagccta 19221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 27313 - 27374
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcctagattttaa 76  Q
    ||||||||||||||| | ||||||||  | |||| |||| |||||||||||||| |||||||    
T  27313 gactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctaaattttaa 27374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 1362 - 1310
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  1362 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 1310  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 8598 - 8546
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  | |||||||||||||||||||||||    
T  8598 gactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttagcct 8546  T

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Target: scaffold0370 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 238 - 290
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  238 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcct 290  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 17174 - 17126
Alignment:
Q  16 actaaaaccaaaaccaaacatatttataaggactaaaatcatattttag 64  Q
    |||||||||||||||||||||||||  | |||| |||| ||||||||||    
T  17174 actaaaaccaaaaccaaacatatttggagggaccaaaaccatattttag 17126  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 54866 - 54814
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| |  |||||||  ||||||||||| |||||||||||||    
T  54866 gactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcct 54814  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 5454 - 5398
Alignment:
Q  11 cagagactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||||||| |  |||||||  | ||||||||| |||||||||||||    
T  5454 cagagactaaaaccaaaacaaggcatatttgcagggactaaaaccatattttagcct 5398  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 5657 - 5709
Alignment:
Q  15 gactaaaaccaaaaccaaacatatttataaggactaaaatcatattttagcct 67  Q
    ||||||||||||||| | ||||||||  | ||||||||| |||||||||||||    
T  5657 gactaaaaccaaaacaagacatatttgcagggactaaaaccatattttagcct 5709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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