View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2544_low_6 (Length: 290)

Name: NF2544_low_6
Description: NF2544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2544_low_6
NF2544_low_6
[»] scaffold0049 (1 HSPs)
scaffold0049 (163-290)||(63620-63747)
[»] chr3 (67 HSPs)
chr3 (9-162)||(29126050-29126203)
chr3 (1-164)||(18163715-18163878)
chr3 (5-162)||(50527636-50527793)
chr3 (10-162)||(52201981-52202133)
chr3 (4-162)||(52571426-52571584)
chr3 (1-162)||(13594872-13595033)
chr3 (2-159)||(22729222-22729379)
chr3 (1-162)||(12251506-12251667)
chr3 (1-102)||(44254599-44254700)
chr3 (1-156)||(1092876-1093031)
chr3 (1-97)||(11232153-11232249)
chr3 (1-163)||(28952390-28952552)
chr3 (1-162)||(36633486-36633647)
chr3 (1-102)||(21259433-21259534)
chr3 (1-159)||(32270918-32271074)
chr3 (1-97)||(35083857-35083953)
chr3 (1-163)||(7160289-7160451)
chr3 (9-102)||(27742545-27742638)
chr3 (1-163)||(49169791-49169953)
chr3 (9-102)||(44205471-44205565)
chr3 (3-102)||(49657212-49657311)
chr3 (2-163)||(16908818-16908969)
chr3 (1-96)||(49657097-49657192)
chr3 (2-96)||(32270806-32270900)
chr3 (1-102)||(4618210-4618309)
chr3 (1-96)||(11232040-11232135)
chr3 (9-96)||(13594767-13594854)
chr3 (1-100)||(34660807-34660906)
chr3 (1-96)||(44254486-44254581)
chr3 (1-96)||(50527519-50527614)
chr3 (2-96)||(45045388-45045482)
chr3 (3-96)||(36633665-36633758)
chr3 (4-96)||(1092766-1092858)
chr3 (9-96)||(22729398-22729485)
chr3 (2-88)||(28952278-28952364)
chr3 (8-98)||(31174565-31174655)
chr3 (2-92)||(52499197-52499287)
chr3 (1-102)||(25246223-25246324)
chr3 (1-96)||(16908704-16908799)
chr3 (9-96)||(29125937-29126024)
chr3 (1-96)||(35083971-35084066)
chr3 (4-96)||(52202160-52202252)
chr3 (1-102)||(45045268-45045369)
chr3 (21-96)||(21259226-21259301)
chr3 (21-96)||(21259340-21259415)
chr3 (1-93)||(2618953-2619043)
chr3 (25-65)||(743958-743998)
chr3 (4-96)||(12251396-12251488)
chr3 (169-203)||(750702-750736)
chr3 (124-157)||(7441704-7441737)
chr3 (169-201)||(14027959-14027991)
chr3 (169-200)||(17568753-17568784)
chr3 (124-162)||(2618884-2618922)
chr3 (169-203)||(7171444-7171478)
chr3 (171-201)||(13845584-13845614)
chr3 (169-203)||(35994820-35994854)
chr3 (171-200)||(16000101-16000130)
chr3 (169-202)||(21479067-21479100)
chr3 (27-88)||(49169979-49170040)
chr3 (169-201)||(3164108-3164140)
chr3 (169-201)||(10318123-10318155)
chr3 (169-201)||(10335369-10335401)
chr3 (169-201)||(14747511-14747543)
chr3 (169-201)||(15796377-15796409)
chr3 (173-201)||(23870622-23870650)
chr3 (126-162)||(25246350-25246386)
chr3 (173-201)||(45451523-45451551)
[»] chr2 (64 HSPs)
chr2 (1-164)||(2249578-2249741)
chr2 (9-160)||(34983277-34983428)
chr2 (1-164)||(38763711-38763874)
chr2 (1-163)||(23869661-23869823)
chr2 (1-162)||(38527173-38527334)
chr2 (1-100)||(26293221-26293320)
chr2 (1-162)||(13615961-13616122)
chr2 (1-102)||(19283928-19284029)
chr2 (1-162)||(6750004-6750165)
chr2 (1-162)||(36436180-36436341)
chr2 (2-162)||(22674739-22674899)
chr2 (1-162)||(1115036-1115197)
chr2 (1-102)||(16194311-16194412)
chr2 (9-162)||(28745499-28745653)
chr2 (1-102)||(34494473-34494574)
chr2 (1-162)||(1021066-1021229)
chr2 (2-102)||(31392606-31392706)
chr2 (4-162)||(44545730-44545888)
chr2 (4-102)||(11764853-11764951)
chr2 (1-102)||(7366210-7366311)
chr2 (1-102)||(12995025-12995126)
chr2 (2-102)||(26860661-26860761)
chr2 (21-102)||(42016562-42016643)
chr2 (1-102)||(43471452-43471553)
chr2 (21-102)||(41699243-41699324)
chr2 (10-94)||(3836347-3836431)
chr2 (1-96)||(2249759-2249854)
chr2 (1-96)||(6749891-6749986)
chr2 (1-96)||(11764972-11765067)
chr2 (2-100)||(11935375-11935473)
chr2 (2-96)||(42016681-42016775)
chr2 (3-96)||(13615850-13615943)
chr2 (3-96)||(44545616-44545709)
chr2 (2-86)||(38527361-38527445)
chr2 (1-96)||(16194430-16194525)
chr2 (29-100)||(17526052-17526123)
chr2 (1-96)||(23869841-23869936)
chr2 (1-96)||(26293338-26293433)
chr2 (1-96)||(36436067-36436162)
chr2 (10-96)||(34983454-34983540)
chr2 (3-96)||(28745380-28745473)
chr2 (4-96)||(7366329-7366421)
chr2 (28-96)||(38763892-38763960)
chr2 (9-96)||(1114931-1115018)
chr2 (3-96)||(11935262-11935355)
chr2 (8-100)||(32099992-32100084)
chr2 (9-96)||(3836232-3836319)
chr2 (1-96)||(26860547-26860642)
chr2 (1-96)||(31392724-31392819)
chr2 (11-96)||(1020963-1021048)
chr2 (8-89)||(2077562-2077643)
chr2 (1-96)||(12995144-12995239)
chr2 (117-156)||(42473566-42473605)
chr2 (2-88)||(31643610-31643696)
chr2 (169-203)||(26769459-26769493)
chr2 (169-203)||(27447084-27447118)
chr2 (129-161)||(12994975-12995007)
chr2 (169-201)||(21374777-21374809)
chr2 (11-99)||(29035408-29035496)
chr2 (173-202)||(27084229-27084258)
chr2 (125-162)||(34494597-34494634)
chr2 (173-202)||(37558938-37558967)
chr2 (169-201)||(31283992-31284024)
chr2 (173-201)||(44770207-44770235)
[»] chr8 (70 HSPs)
chr8 (1-162)||(41837953-41838114)
chr8 (9-164)||(3886787-3886942)
chr8 (2-162)||(7012337-7012497)
chr8 (2-162)||(24797053-24797213)
chr8 (1-162)||(4231220-4231380)
chr8 (2-159)||(5590173-5590330)
chr8 (9-162)||(9830607-9830760)
chr8 (1-102)||(42556092-42556193)
chr8 (1-162)||(3659821-3659982)
chr8 (1-161)||(6316877-6317037)
chr8 (1-102)||(22658345-22658446)
chr8 (1-102)||(28564944-28565045)
chr8 (1-102)||(28572567-28572668)
chr8 (1-162)||(38567127-38567290)
chr8 (2-100)||(1183884-1183982)
chr8 (4-102)||(21434899-21434997)
chr8 (1-102)||(2317121-2317222)
chr8 (1-102)||(7242633-7242734)
chr8 (13-102)||(43117408-43117497)
chr8 (2-102)||(7413091-7413191)
chr8 (1-101)||(10092315-10092415)
chr8 (1-162)||(1098057-1098218)
chr8 (9-102)||(36060417-36060510)
chr8 (1-102)||(41388065-41388166)
chr8 (9-77)||(4697891-4697959)
chr8 (1-96)||(5590059-5590154)
chr8 (1-96)||(36060536-36060631)
chr8 (1-93)||(25642731-25642823)
chr8 (1-88)||(7242521-7242608)
chr8 (1-96)||(43117528-43117623)
chr8 (2-96)||(21435018-21435112)
chr8 (9-98)||(38567306-38567395)
chr8 (1-96)||(7012516-7012611)
chr8 (1-96)||(28565063-28565158)
chr8 (1-96)||(28572686-28572781)
chr8 (21-99)||(197265-197343)
chr8 (21-99)||(312102-312180)
chr8 (1-102)||(7422047-7422148)
chr8 (4-96)||(41169877-41169969)
chr8 (9-96)||(1184001-1184088)
chr8 (1-96)||(2317240-2317335)
chr8 (21-96)||(3886686-3886761)
chr8 (9-96)||(4697985-4698072)
chr8 (21-96)||(10092433-10092508)
chr8 (1-96)||(22658232-22658327)
chr8 (1-96)||(24796939-24797034)
chr8 (1-96)||(42555979-42556074)
chr8 (5-96)||(1098236-1098327)
chr8 (1-96)||(41388184-41388279)
chr8 (9-96)||(41837848-41837935)
chr8 (10-96)||(4231398-4231484)
chr8 (117-162)||(34934370-34934415)
chr8 (9-96)||(3659716-3659803)
chr8 (1-96)||(6317055-6317150)
chr8 (1-96)||(7413211-7413305)
chr8 (35-86)||(8996424-8996475)
chr8 (10-88)||(41169771-41169849)
chr8 (124-161)||(1183823-1183860)
chr8 (19-100)||(25383055-25383135)
chr8 (5-100)||(32017978-32018073)
chr8 (127-164)||(10092255-10092292)
chr8 (117-162)||(11635758-11635803)
chr8 (1-102)||(11635819-11635920)
chr8 (9-86)||(17836503-17836580)
chr8 (166-201)||(3951609-3951644)
chr8 (171-201)||(20785544-20785574)
chr8 (172-201)||(24413646-24413675)
chr8 (173-202)||(36450823-36450852)
chr8 (173-201)||(5137490-5137518)
chr8 (169-201)||(43737896-43737928)
[»] chr4 (79 HSPs)
chr4 (1-162)||(11650964-11651125)
chr4 (1-162)||(6755828-6755989)
chr4 (2-162)||(13233229-13233389)
chr4 (10-160)||(2654917-2655067)
chr4 (4-164)||(40228431-40228592)
chr4 (1-164)||(18491184-18491347)
chr4 (1-162)||(16925106-16925266)
chr4 (1-163)||(36584422-36584583)
chr4 (1-162)||(44134493-44134653)
chr4 (9-162)||(44817555-44817708)
chr4 (1-102)||(36955008-36955109)
chr4 (4-161)||(44745591-44745748)
chr4 (1-102)||(12700566-12700667)
chr4 (1-164)||(38141555-38141719)
chr4 (1-102)||(45670019-45670120)
chr4 (4-162)||(19653645-19653803)
chr4 (4-162)||(31581751-31581909)
chr4 (2-100)||(41832437-41832535)
chr4 (1-162)||(31664165-31664322)
chr4 (2-102)||(13613091-13613191)
chr4 (10-102)||(43564477-43564569)
chr4 (2-162)||(27270353-27270512)
chr4 (2-102)||(50767093-50767193)
chr4 (2-102)||(54795728-54795828)
chr4 (3-96)||(44134671-44134764)
chr4 (1-96)||(13233408-13233503)
chr4 (1-96)||(13612977-13613072)
chr4 (11-102)||(52581515-52581606)
chr4 (1-94)||(18491367-18491460)
chr4 (4-96)||(10096344-10096436)
chr4 (4-88)||(44745478-44745562)
chr4 (9-96)||(6756007-6756094)
chr4 (2-84)||(22647189-22647270)
chr4 (1-162)||(51001475-51001635)
chr4 (9-101)||(4632711-4632803)
chr4 (10-102)||(10096463-10096555)
chr4 (8-96)||(12700460-12700548)
chr4 (1-96)||(16925284-16925379)
chr4 (1-96)||(27270532-27270626)
chr4 (1-96)||(31664052-31664147)
chr4 (9-96)||(36584601-36584688)
chr4 (1-96)||(36954895-36954990)
chr4 (9-96)||(38141450-38141537)
chr4 (1-96)||(41832555-41832650)
chr4 (9-88)||(43564604-43564683)
chr4 (4-96)||(44817438-44817530)
chr4 (2-93)||(4632590-4632681)
chr4 (53-100)||(9046131-9046178)
chr4 (9-96)||(11650859-11650946)
chr4 (21-96)||(31581655-31581730)
chr4 (1-96)||(54795614-54795708)
chr4 (1-94)||(7638755-7638848)
chr4 (1-86)||(13857687-13857772)
chr4 (3-96)||(50767213-50767305)
chr4 (1-88)||(13869215-13869302)
chr4 (1-88)||(36801859-36801946)
chr4 (2-96)||(22647289-22647383)
chr4 (1-89)||(10393895-10393983)
chr4 (1-96)||(2654795-2654890)
chr4 (5-96)||(19653534-19653624)
chr4 (1-100)||(18735241-18735344)
chr4 (124-162)||(22647110-22647148)
chr4 (166-203)||(5111587-5111624)
chr4 (129-162)||(36955136-36955169)
chr4 (6-86)||(52581644-52581724)
chr4 (1-88)||(40228315-40228402)
chr4 (124-162)||(13857612-13857650)
chr4 (124-162)||(13869142-13869180)
chr4 (1-100)||(18668990-18669093)
chr4 (173-203)||(22234954-22234984)
chr4 (169-203)||(23293069-23293103)
chr4 (167-201)||(28470341-28470375)
chr4 (169-203)||(37203220-37203254)
chr4 (124-162)||(52581455-52581492)
chr4 (172-201)||(4157102-4157131)
chr4 (172-201)||(20633429-20633458)
chr4 (169-201)||(11110754-11110786)
chr4 (8-84)||(26653141-26653217)
chr4 (169-201)||(46084049-46084081)
[»] chr5 (65 HSPs)
chr5 (1-164)||(3631256-3631419)
chr5 (1-159)||(16823133-16823291)
chr5 (1-162)||(9737704-9737865)
chr5 (1-162)||(25701418-25701579)
chr5 (9-162)||(26525235-26525388)
chr5 (1-161)||(43358410-43358570)
chr5 (1-102)||(7440478-7440579)
chr5 (2-162)||(30772878-30773038)
chr5 (2-160)||(43348635-43348793)
chr5 (2-162)||(8074237-8074398)
chr5 (1-157)||(29390273-29390429)
chr5 (2-102)||(15374174-15374274)
chr5 (2-102)||(9596164-9596264)
chr5 (2-102)||(32304651-32304751)
chr5 (29-162)||(13013280-13013413)
chr5 (1-94)||(7440365-7440458)
chr5 (4-163)||(19577181-19577339)
chr5 (3-102)||(10925568-10925667)
chr5 (1-96)||(30773057-30773152)
chr5 (5-102)||(20656859-20656956)
chr5 (1-96)||(3631437-3631532)
chr5 (1-163)||(5844104-5844266)
chr5 (1-96)||(16823309-16823404)
chr5 (9-162)||(41084587-41084738)
chr5 (9-162)||(26297014-26297167)
chr5 (29-102)||(13084668-13084741)
chr5 (1-96)||(9596050-9596145)
chr5 (9-100)||(20487033-20487124)
chr5 (1-96)||(32304537-32304632)
chr5 (1-96)||(43348812-43348907)
chr5 (9-96)||(8074131-8074218)
chr5 (1-96)||(25701306-25701400)
chr5 (1-96)||(26525114-26525209)
chr5 (1-88)||(41817526-41817613)
chr5 (2-96)||(43358588-43358682)
chr5 (7-96)||(10925687-10925776)
chr5 (9-94)||(26785010-26785095)
chr5 (1-93)||(37042551-37042643)
chr5 (1-96)||(13013139-13013234)
chr5 (116-161)||(28662117-28662162)
chr5 (3-96)||(41084468-41084560)
chr5 (1-96)||(13084527-13084622)
chr5 (5-100)||(20071215-20071310)
chr5 (1-96)||(26296893-26296987)
chr5 (116-163)||(26784910-26784957)
chr5 (8-86)||(22578939-22579017)
chr5 (169-207)||(34276795-34276833)
chr5 (169-202)||(15382420-15382453)
chr5 (169-208)||(13287482-13287522)
chr5 (116-154)||(6229071-6229109)
chr5 (169-198)||(8419985-8420014)
chr5 (166-203)||(17177103-17177140)
chr5 (169-202)||(21522693-21522726)
chr5 (169-202)||(21533259-21533292)
chr5 (117-158)||(22579048-22579089)
chr5 (44-93)||(28662185-28662234)
chr5 (169-202)||(32426935-32426968)
chr5 (166-199)||(41995417-41995450)
chr5 (169-201)||(6401442-6401474)
chr5 (171-203)||(6770485-6770517)
chr5 (118-158)||(9596280-9596320)
chr5 (169-201)||(20683325-20683357)
chr5 (169-201)||(23016074-23016106)
chr5 (56-100)||(30050144-30050188)
chr5 (173-201)||(43001762-43001790)
[»] chr1 (86 HSPs)
chr1 (1-163)||(16692946-16693108)
chr1 (1-159)||(33012054-33012212)
chr1 (3-162)||(919709-919868)
chr1 (1-162)||(17285291-17285452)
chr1 (1-162)||(42371969-42372130)
chr1 (3-162)||(8530082-8530241)
chr1 (1-160)||(44052456-44052615)
chr1 (1-102)||(45836903-45837004)
chr1 (1-162)||(6849752-6849913)
chr1 (1-162)||(24790434-24790595)
chr1 (2-163)||(29169940-29170101)
chr1 (1-162)||(29981704-29981865)
chr1 (4-102)||(40428781-40428879)
chr1 (1-102)||(51139745-51139846)
chr1 (4-102)||(24544718-24544816)
chr1 (3-97)||(25299087-25299181)
chr1 (1-102)||(8086289-8086390)
chr1 (1-102)||(44317626-44317727)
chr1 (19-162)||(37125692-37125835)
chr1 (1-100)||(46224757-46224856)
chr1 (10-162)||(47561726-47561878)
chr1 (3-102)||(48708416-48708515)
chr1 (2-102)||(23177401-23177501)
chr1 (1-85)||(40567042-40567126)
chr1 (1-96)||(40567144-40567239)
chr1 (1-96)||(45837022-45837117)
chr1 (1-96)||(29981591-29981686)
chr1 (9-96)||(33011949-33012036)
chr1 (1-96)||(40428665-40428760)
chr1 (1-96)||(47561905-47562000)
chr1 (9-162)||(9042424-9042576)
chr1 (2-96)||(42372148-42372242)
chr1 (10-96)||(48708310-48708396)
chr1 (3-96)||(46224646-46224739)
chr1 (4-96)||(8086408-8086500)
chr1 (1-96)||(16692833-16692928)
chr1 (1-96)||(25298972-25299067)
chr1 (9-96)||(24790613-24790701)
chr1 (5-88)||(23177528-23177611)
chr1 (1-96)||(51139864-51139959)
chr1 (2-96)||(919595-919689)
chr1 (2-96)||(17285179-17285273)
chr1 (4-97)||(9246901-9246994)
chr1 (1-96)||(6849931-6850026)
chr1 (9-96)||(24542672-24542759)
chr1 (9-96)||(24542786-24542873)
chr1 (9-96)||(24542900-24542987)
chr1 (9-96)||(24543014-24543101)
chr1 (9-96)||(24543128-24543215)
chr1 (9-96)||(24543242-24543329)
chr1 (9-96)||(24543356-24543443)
chr1 (9-96)||(24543470-24543557)
chr1 (9-96)||(24543584-24543671)
chr1 (9-96)||(24543698-24543785)
chr1 (9-96)||(24543812-24543899)
chr1 (9-96)||(24543926-24544013)
chr1 (9-96)||(24544040-24544127)
chr1 (9-96)||(24544154-24544241)
chr1 (9-96)||(24544268-24544355)
chr1 (9-96)||(24544382-24544469)
chr1 (9-96)||(24544496-24544583)
chr1 (9-96)||(24544610-24544697)
chr1 (9-96)||(37125871-37125958)
chr1 (1-96)||(44052343-44052438)
chr1 (2-96)||(9042304-9042398)
chr1 (1-96)||(29170120-29170215)
chr1 (1-100)||(32540591-32540690)
chr1 (1-66)||(37343082-37343147)
chr1 (169-204)||(48548045-48548080)
chr1 (124-163)||(48708538-48708577)
chr1 (1-75)||(8530288-8530362)
chr1 (129-162)||(45836854-45836887)
chr1 (169-201)||(10577818-10577850)
chr1 (116-164)||(17879973-17880021)
chr1 (169-201)||(25934572-25934604)
chr1 (124-160)||(37343027-37343063)
chr1 (169-201)||(38078739-38078771)
chr1 (117-161)||(46224874-46224918)
chr1 (9-100)||(21852062-21852153)
chr1 (169-203)||(24334778-24334812)
chr1 (5-96)||(49001483-49001575)
chr1 (169-202)||(398848-398881)
chr1 (166-203)||(17831605-17831642)
chr1 (173-209)||(35919358-35919394)
chr1 (124-160)||(43532478-43532514)
chr1 (173-201)||(51409981-51410009)
[»] scaffold0014 (3 HSPs)
scaffold0014 (1-162)||(64933-65094)
scaffold0014 (1-96)||(65226-65321)
scaffold0014 (1-96)||(65112-65207)
[»] chr7 (68 HSPs)
chr7 (1-162)||(26873702-26873863)
chr7 (2-162)||(36358309-36358469)
chr7 (1-159)||(44468019-44468177)
chr7 (1-162)||(46027679-46027840)
chr7 (2-158)||(17166869-17167025)
chr7 (5-163)||(43859089-43859247)
chr7 (1-163)||(44724061-44724223)
chr7 (1-162)||(36675485-36675646)
chr7 (1-102)||(22723774-22723875)
chr7 (1-102)||(31065621-31065722)
chr7 (1-102)||(31428796-31428897)
chr7 (13-162)||(45350051-45350199)
chr7 (1-102)||(29075183-29075284)
chr7 (1-88)||(23469394-23469481)
chr7 (2-102)||(9624055-9624155)
chr7 (10-102)||(42241936-42242028)
chr7 (1-102)||(39976380-39976481)
chr7 (9-102)||(44142821-44142914)
chr7 (9-164)||(16834283-16834438)
chr7 (9-102)||(18104325-18104417)
chr7 (2-102)||(31931910-31932010)
chr7 (1-96)||(36358195-36358290)
chr7 (1-162)||(23562646-23562806)
chr7 (1-100)||(8461760-8461859)
chr7 (1-96)||(9624174-9624269)
chr7 (5-96)||(41367724-41367815)
chr7 (1-96)||(17167045-17167140)
chr7 (1-96)||(31065508-31065603)
chr7 (1-96)||(31428915-31429010)
chr7 (1-96)||(36675372-36675467)
chr7 (1-96)||(43859269-43859364)
chr7 (1-96)||(44142939-44143034)
chr7 (3-100)||(22499778-22499875)
chr7 (9-86)||(40055666-40055743)
chr7 (4-93)||(46828837-46828926)
chr7 (1-96)||(22723661-22723756)
chr7 (1-96)||(42241814-42241909)
chr7 (9-96)||(44723956-44724043)
chr7 (1-96)||(46027858-46027953)
chr7 (2-96)||(40055769-40055863)
chr7 (3-96)||(44467908-44468001)
chr7 (9-96)||(23469289-23469376)
chr7 (29-96)||(29075098-29075165)
chr7 (1-96)||(45350229-45350324)
chr7 (1-95)||(41367838-41367932)
chr7 (1-85)||(25174223-25174307)
chr7 (29-88)||(22566606-22566665)
chr7 (1-96)||(26873881-26873976)
chr7 (1-96)||(39976499-39976594)
chr7 (9-164)||(29502138-29502293)
chr7 (120-162)||(40054298-40054340)
chr7 (126-163)||(9014390-9014427)
chr7 (125-162)||(19692467-19692504)
chr7 (117-162)||(29662932-29662977)
chr7 (169-201)||(9778452-9778484)
chr7 (1-84)||(14629643-14629726)
chr7 (49-100)||(40883343-40883394)
chr7 (116-155)||(41367666-41367705)
chr7 (44-86)||(6961122-6961164)
chr7 (119-165)||(28754810-28754856)
chr7 (117-158)||(8727725-8727766)
chr7 (130-163)||(9013814-9013847)
chr7 (166-203)||(9408421-9408458)
chr7 (166-199)||(11061156-11061189)
chr7 (171-203)||(1433396-1433428)
chr7 (126-162)||(8461698-8461734)
chr7 (169-201)||(17851375-17851407)
chr7 (171-199)||(21141067-21141095)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-159)||(19048-19206)
scaffold0050 (1-96)||(19224-19319)
[»] chr6 (49 HSPs)
chr6 (1-162)||(2660836-2660997)
chr6 (1-160)||(24130242-24130396)
chr6 (1-162)||(9079053-9079214)
chr6 (9-163)||(11450510-11450668)
chr6 (5-162)||(24635472-24635629)
chr6 (1-102)||(15469149-15469250)
chr6 (9-162)||(12698493-12698647)
chr6 (4-162)||(16461410-16461568)
chr6 (1-97)||(7021882-7021978)
chr6 (1-102)||(8560485-8560586)
chr6 (10-102)||(34023549-34023641)
chr6 (1-102)||(26468508-26468609)
chr6 (5-96)||(12996464-12996555)
chr6 (13-102)||(34127557-34127646)
chr6 (1-96)||(2660723-2660818)
chr6 (1-96)||(34127676-34127771)
chr6 (1-96)||(7021996-7022091)
chr6 (1-96)||(34023427-34023522)
chr6 (27-100)||(13405387-13405460)
chr6 (3-102)||(14883161-14883261)
chr6 (1-88)||(11450389-11450476)
chr6 (1-88)||(12698680-12698767)
chr6 (5-96)||(23258843-23258934)
chr6 (5-96)||(23258957-23259048)
chr6 (9-96)||(26468627-26468714)
chr6 (3-96)||(8560604-8560697)
chr6 (2-82)||(23259067-23259147)
chr6 (1-96)||(15469268-15469362)
chr6 (1-102)||(12996343-12996444)
chr6 (13-100)||(7536518-7536605)
chr6 (1-96)||(24130129-24130224)
chr6 (2-96)||(24635356-24635450)
chr6 (1-42)||(31968990-31969031)
chr6 (169-203)||(7938058-7938092)
chr6 (118-163)||(10290456-10290501)
chr6 (127-164)||(12996282-12996319)
chr6 (169-201)||(18367781-18367813)
chr6 (169-203)||(5970185-5970219)
chr6 (169-203)||(9107453-9107487)
chr6 (125-163)||(26468447-26468485)
chr6 (29-86)||(1398132-1398188)
chr6 (117-158)||(13405477-13405518)
chr6 (169-201)||(8777056-8777088)
chr6 (9-100)||(10290519-10290610)
chr6 (169-201)||(10294051-10294083)
chr6 (129-161)||(15469101-15469133)
chr6 (9-88)||(16461301-16461381)
chr6 (173-201)||(34225888-34225916)
chr6 (167-203)||(34290158-34290194)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-102)||(331831-331932)
scaffold0002 (2-96)||(331950-332044)
[»] scaffold0978 (2 HSPs)
scaffold0978 (1-102)||(1163-1264)
scaffold0978 (1-88)||(1290-1377)
[»] scaffold0131 (3 HSPs)
scaffold0131 (9-102)||(11237-11330)
scaffold0131 (9-96)||(11356-11443)
scaffold0131 (118-162)||(11166-11210)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-100)||(303820-303915)
[»] scaffold0116 (1 HSPs)
scaffold0116 (169-203)||(9840-9874)
[»] scaffold0041 (1 HSPs)
scaffold0041 (49-100)||(82890-82941)
[»] scaffold0053 (1 HSPs)
scaffold0053 (169-203)||(8740-8774)
[»] scaffold0027 (1 HSPs)
scaffold0027 (169-202)||(46625-46658)
[»] scaffold0652 (1 HSPs)
scaffold0652 (171-199)||(547-575)
[»] scaffold0171 (1 HSPs)
scaffold0171 (173-201)||(23371-23399)
[»] scaffold0021 (1 HSPs)
scaffold0021 (169-201)||(130426-130458)


Alignment Details
Target: scaffold0049 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 163 - 290
Target Start/End: Complemental strand, 63747 - 63620
Alignment:
Q  163 ccggtatccggtgtccgtgtccgtatccgtgcttcataggtagtaatcttcaaagctatgacaaattttgataagaatttcctatgataaaagtaaagca 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63747 ccggtatccggtgtccgtgtccgtatccgtgcttcataggtagtaatcttcaaagctatgacaaattttgataagaatttcctatgataaaagtaaagca 63648  T
Q  263 tatgcaattttcggacctgccgtttact 290  Q
    ||||||||||||||||| ||| ||||||    
T  63647 tatgcaattttcggaccggccatttact 63620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 29126050 - 29126203
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          
T  29126050 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 29126149  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           ||||||| |||||||||||||||||||||||||||||||||||||||    
T  29126150 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 29126203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18163878 - 18163715
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  18163878 cgggtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgaataaaatctcgcaaaatagacctataatcgtt 18163779  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18163778 gatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 18163715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 50527636 - 50527793
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgann 104  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||      
T  50527636 tggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataaacgttgatt 50527735  T
Q  105 nnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                |||||| |||||||||||||||||||||||||||||||||||||||    
T  50527736 ttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 50527793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 52202133 - 52201981
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnn 109  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||           
T  52202133 cactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgatttttta 52202034  T
Q  110 nnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
          ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  52202033 atttttccgggtgggccgtgacccaccccagcccatgaagggctccgccactg 52201981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 52571426 - 52571584
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||||||||||||     
T  52571426 gtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaattagacctataatcgttgat 52571525  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                ||||||| |||||||||||||||||||||||||||||||||||||||    
T  52571526 tttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 52571584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13594872 - 13595033
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||| ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13594872 cgggtgggccactacaccactttgtaggaatttgaatcagccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 13594971  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||              | |||| |||||||||||||||||||||||| ||||||||||||||    
T  13594972 gattttttaattttttcaggtgggccgtggcccaccccagcccatgacgggctccgccactg 13595033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 22729379 - 22729222
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  22729379 gggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttg 22729280  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    |             ||||||| |||||||||||||||||||||| |||||||||||||    
T  22729279 attttttaatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 22729222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12251506 - 12251667
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||| ||||||||| |||||||||||    
T  12251506 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattatataaaatctcacaaaatagacctataatcgtt 12251605  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  12251606 gatttttaaatttttccgggtgggccgtggtccaccccagcccatgaagggctctgccactg 12251667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44254599 - 44254700
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  44254599 cgggtgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatatataatcatt 44254698  T
Q  101 ga 102  Q
    ||    
T  44254699 ga 44254700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1092876 - 1093031
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||    
T  1092876 cgggtgggccactacaccactttacaggaatttggatcaaccaaaacataaaacccacacaaaattgcataaaatctcgcaaaatagacttatagtcgtt 1092975  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccg 156  Q
    ||             ||||||| ||||||||||||| |||||||||||||||||||    
T  1092976 gattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccg 1093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11232153 - 11232249
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatc 97  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11232153 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatc 11232249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28952390 - 28952552
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| |||||||||  |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  28952390 cgggtgggccactacacccctttgcaaaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacccataatcgtt 28952489  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             || ||||   ||||||||||||||||||||||||||||||||||||||    
T  28952490 gattttttaatttttccaggtggatcgtggcccaccccagcccatgaagggctccgccactgc 28952552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36633647 - 36633486
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| || |||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||| |||||||||||    
T  36633647 cgggtgggccgctacaccactttgcaggaatttggatcaaccaaaacataaaatcgatacaaaattgtataaaatctcacaaaatagacctataatcgtt 36633548  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||| || | |||||||||||||||||||||||||||||||||||||    
T  36633547 gattttttaatttttccggatgggtcgtggcccaccccagcccatgaagggctccgccactg 36633486  T

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Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21259433 - 21259534
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||| |||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  21259433 cgggtggatcactacaccactttgcaggaatttgaatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataatcgtt 21259532  T
Q  101 ga 102  Q
    ||    
T  21259533 ga 21259534  T

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Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 32270918 - 32271074
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||| ||    
T  32270918 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaataga--cataatcatt 32271015  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    ||             ||||||| || |||||||||||||||||||||| ||||||||||    
T  32271016 gattttttaatttttccgggtgggctgtggcccaccccagcccatgaaaggctccgcca 32271074  T

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Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35083953 - 35083857
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatc 97  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  35083953 cgggtggaccactacaccactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaattgacctataatc 35083857  T

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Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7160289 - 7160451
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| | ||||| ||||||| ||| |||| |||| |||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  7160289 cgggtgggccactacaccaatttgcgggaatttggattaaccgaaacctaaaactgacacaaaattacataaaatctcgcaaaatagacctataatcgtt 7160388  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  7160389 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaaaggctccgccactgc 7160451  T

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Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 27742638 - 27742545
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  27742638 ccactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctctcaaaatagacctataagcgttga 27742545  T

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Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 49169953 - 49169791
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||| ||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  49169953 cgggtgggccattacaccactttgcagaaattcggatcaaccaaaacataaaaccgacacaaaattgtataaaatttcgcaaaatagacctataatcgtt 49169854  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             | ||||| |  ||||||||||||||||||| |||||||||||||||||    
T  49169853 gatttttttacttttctgggtgggttgtggcccaccccagcccataaagggctccgccactgc 49169791  T

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Target: chr3; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 44205565 - 44205471
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaa-ttgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||  |||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44205565 ccactacatcactttgcaagaatttggatcaaccaacacataaaaccgacacaaaaattgcataaaatctcgcaaaatagatctataatcgttga 44205471  T

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Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 49657212 - 49657311
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||  |||||||| ||||| |||||||    
T  49657212 ggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacgtaaaattgcataaaatttcaaaaaatagacctatagtcgttga 49657311  T

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Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 16908818 - 16908969
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||    
T  16908818 gggtgggccactacaccactttgctggaatttggatcaaccaaaacataaaaccga----------cataaaatctcgcaaaatagacctataatcgttg 16908907  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    |             ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  16908908 aattttttatttttccgggtgggccgtggcccaccccagcccatgaagggctctgccactgc 16908969  T

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Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49657097 - 49657192
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  49657097 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 49657192  T

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Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 32270806 - 32270900
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||| | ||||||||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  32270806 gggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32270900  T

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Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4618309 - 4618210
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| |||||| | || ||| ||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  4618309 cgggtggaccactacac-actttgaaagagtttggatcaacaaaaa-ataaaaccgacacaaaattgtataaaatcttgcaaaatagatctataatcgtt 4618212  T

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Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11232040 - 11232135
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  11232040 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11232135  T

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Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 13594767 - 13594854
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  13594767 ccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13594854  T

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Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34660906 - 34660807
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||  ||||| ||||| ||||||| ||||||||||||||||||  ||||||||||| |||||||| |||| ||||||    
T  34660906 cgggtggaccactacaccactttgcaaaaatttggatcagccaaaacctaaaaccgacacaaaattatataaaatctcgtaaaatagacctatgatcgtt 34660807  T

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Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44254486 - 44254581
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  44254486 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44254581  T

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Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50527519 - 50527614
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | |||||  |||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  50527519 cgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 50527614  T

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Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 45045482 - 45045388
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||| ||||||||||||||| ||| || | |||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  45045482 gggtggaccactacaccactttgcaggaatttggattaatcgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 45045388  T

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Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 36633758 - 36633665
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||| | ||||||||||||| |||||||| |||  ||||||||||| ||||||| |||| ||||||||||||||| |||||||    
T  36633758 ggtggaccactacaccaatttgcaggaatttggatcaaccgaaatctaaaaccgacataaaattgtataatatctcgcaaaatagacctataat 36633665  T

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Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 1092766 - 1092858
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  1092766 gtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcgcaaaatagatctataat 1092858  T

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Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 22729485 - 22729398
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  22729485 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22729398  T

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Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 28952278 - 28952364
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    |||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  28952278 gggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 28952364  T

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Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 31174565 - 31174655
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcg 98  Q
    |||||||||| |||||||  |||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||  ||||||||| ||||    
T  31174565 accactacaccactttgctagaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatatcgcaaggtagatctatgatcg 31174655  T

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Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 52499197 - 52499287
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatcta 92  Q
    |||||||||||||||| ||||||| | ||||||||||| || |||  ||||||| ||||||||||| |||||||||||||||||| |||||    
T  52499197 gggtggaccactacaccactttgcggaaatttagatcagccgaaatttaaaaccaacacaaaattgtataaaatctcgcaaaataaatcta 52499287  T

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Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25246223 - 25246324
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||| ||||||||||| | ||||| ||||||| |||||||| |||| |||||  |||| ||||||| |||||||||||||||||||| |||||| ||||    
T  25246223 cgggtagaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaaagacataaaattgtataaaatctcgcaaaatagacctataaacgtt 25246322  T
Q  101 ga 102  Q
    ||    
T  25246323 ga 25246324  T

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Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16908704 - 16908799
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||| | |||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  16908704 cgggtgggccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 16908799  T

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Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 29125937 - 29126024
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  29125937 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 29126024  T

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Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35084066 - 35083971
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||  | ||||| ||||||| |||||||| |||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  35084066 cgggtgggccactacatcaatttgcgggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 35083971  T

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Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 52202252 - 52202160
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||| ||||||  |||||||  |||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  52202252 gtgggccactacaccaatttgcgggaattgggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 52202160  T

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Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45045369 - 45045268
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||| |||||||| | ||||| ||||||| |||||||| |||  ||||||| ||| ||||||   ||||||||||||||||| |||||||||| ||    
T  45045369 cgggtggatcactacactagtttgcgggaatttggatcaaccgaaatctaaaaccaacaaaaaattatttaaaatctcgcaaaataaatctataatcatt 45045270  T
Q  101 ga 102  Q
    ||    
T  45045269 ga 45045268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 21259226 - 21259301
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||| |||||||| |||| ||||||||||| ||||||  ||||||||| |||||||||| |||||||    
T  21259226 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 21259340 - 21259415
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||| |||||||| |||| ||||||||||| ||||||  ||||||||| |||||||||| |||||||    
T  21259340 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2619043 - 2618953
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    ||||||| ||||||||| ||||||||||| |||  ||||||  |||| ||||||| ||||  ||||| |||||||||||||||||||| ||||    
T  2619043 cgggtgggccactacaccactttgcaggagtttgaatcaacagaaacttaaaaccaacac--aattgtataaaatctcgcaaaatagacctat 2618953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 743998 - 743958
Alignment:
Q  25 caggaatttagatcaaccaaaacataaaaccgacacaaaat 65  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  743998 caggaattttgatcaaccaaaacataaaaccgacacaaaat 743958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 12251396 - 12251488
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||| ||||| | ||||| ||||||| |||||||| |||  ||||| ||||| ||||||| ||||| |||||||||||||| |||||||    
T  12251396 gtgggccattacaccaatttgctggaatttggatcaaccgaaatctaaaatcgacataaaattgtataaattctcgcaaaatagacctataat 12251488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 750702 - 750736
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  750702 tccggtgtccgtgtccgtatccgtgcttcataggt 750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 7441704 - 7441737
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgc 157  Q
    ||||||||||||||||||||||||||||||||||    
T  7441704 gccgtggcccaccccagcccatgaagggctccgc 7441737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 14027991 - 14027959
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  14027991 tccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 17568753 - 17568784
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcata 200  Q
    ||||||||||||||||||||||||||||||||    
T  17568753 tccggtgtccgtgtccgtatccgtgcttcata 17568784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 2618922 - 2618884
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  2618922 gccgtggcccacctcaacccatgaagggctccgccactg 2618884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 7171478 - 7171444
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||| |||||||||||||||||||||||||    
T  7171478 tccggtgtctgtgtccgtatccgtgcttcataggt 7171444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 13845584 - 13845614
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||    
T  13845584 cggtgtccgtgtccgtatccgtgcttcatag 13845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 35994820 - 35994854
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||| ||||||||||||||||||||||||    
T  35994820 tccggtgtccatgtccgtatccgtgcttcataggt 35994854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 16000101 - 16000130
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcata 200  Q
    ||||||||||||||||||||||||||||||    
T  16000101 cggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 21479100 - 21479067
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    |||||||||||||||||||||| |||||||||||    
T  21479100 tccggtgtccgtgtccgtatccatgcttcatagg 21479067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 49170040 - 49169979
Alignment:
Q  27 ggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| |||||| | |||| ||||||||||| ||||||| ||||| ||| ||||||||||    
T  49170040 ggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaagtcttgcaaaataga 49169979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 3164108 - 3164140
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||| |||||||||||||||||    
T  3164108 tccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 10318123 - 10318155
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||| ||||||||||||||||||    
T  10318123 tccggtgtccgtgttcgtatccgtgcttcatag 10318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 10335369 - 10335401
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||| ||||||||||||||||||    
T  10335369 tccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 14747543 - 14747511
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||| ||||||||||||||||||||    
T  14747543 tccggtgtccgtatccgtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 15796377 - 15796409
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||| ||||||||||||||||    
T  15796377 tccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 23870622 - 23870650
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  23870622 gtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 25246350 - 25246386
Alignment:
Q  126 cgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||||||||||||| |||||| |||||||||||||    
T  25246350 cgtggcccaccccagctcatgaaaggctccgccactg 25246386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 45451551 - 45451523
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  45451551 gtgtccgtgtccgtatccgtgcttcatag 45451523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2249741 - 2249578
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2249741 cgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcatt 2249642  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||              |||||| | |||||||||||||||||||||||||||||||||||||||    
T  2249641 gattttttaattttttcgggtgggtcgtggcccaccccagcccatgaagggctccgccactgcc 2249578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 34983428 - 34983277
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          
T  34983428 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttc 34983329  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccac 160  Q
           ||||||| |||||||||||||||||||||||||||||||||||||    
T  34983328 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccac 34983277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38763874 - 38763711
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  38763874 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgctaaatagacctataatcgtt 38763775  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||             ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38763774 gattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactgcc 38763711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23869823 - 23869661
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23869823 cgggtgggccactacactactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 23869724  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             | ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23869723 gattttttaatttttcggggtgggccgtggcccaccccagcccatggagggctccgccactgc 23869661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38527334 - 38527173
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| | ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  38527334 cgggtgggctactacaccactttgcaggaatttggatcaaccaagacataaaaccgatacaaaattgcataaaatctcacaaaatagacctataatcgtt 38527235  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  38527234 gatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 38527173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26293320 - 26293221
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26293320 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 26293221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13615961 - 13616122
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| | ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  13615961 cgggtgggccactacaccattttgcaggaatttggatcaaccaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 13616060  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| ||||||||||||||||||||||||| | |||||||||||    
T  13616061 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaaagactccgccactg 13616122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19283928 - 19284029
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  19283928 cgggtgggacactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatttataatcgtt 19284027  T
Q  101 ga 102  Q
    ||    
T  19284028 ga 19284029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6750004 - 6750165
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||| |||||||| ||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||   ||||||| |||||||||||    
T  6750004 cgggtggatcactacaccactttgcagaaatttggatcaatcaaaacataaaaccaacacaaaattgcataaaatctcaataaatagacctataatcgtt 6750103  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6750104 gatttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6750165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36436180 - 36436341
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  36436180 cgggtgggccactacaccactttgcaggaatttggatcaagcaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacttataatcgtt 36436279  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
     |               ||||| |||||||||||||||||||||||||||||||||||||||    
T  36436280 aattttttaatttttttgggtgggccgtggcccaccccagcccatgaagggctccgccactg 36436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 22674739 - 22674899
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| | ||||| ||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22674739 gggtgggccactacaccaatttgcgggaatttggatcagccgaaacctaaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttg 22674838  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22674839 attttttaatttttccgggtgggccgtggtccaccccagcccatgaagggctccgccactg 22674899  T

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Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1115036 - 1115197
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||    
T  1115036 cgggtgggccactacaccactttgcagaaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataatt 1115135  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||| |||  ||||||||||||||||||||||||||||||||||||||    
T  1115136 gattttttaatttttccgagtggaccgtggcccaccccagcccatgaagggctccgccactg 1115197  T

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Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16194412 - 16194311
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  16194412 cgggtgggccactacaccactctgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacttataatcgtt 16194313  T
Q  101 ga 102  Q
    ||    
T  16194312 ga 16194311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 28745499 - 28745653
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |          
T  28745499 ccactacaccactttgcaggaatttggat-aaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaatttttt 28745597  T
Q  109 nnnnnnncc--gggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           ||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  28745598 aattttcccgggggtgggccgtggcccaccccagcccatgaagggctccgccactg 28745653  T

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Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34494473 - 34494574
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  34494473 cgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgatacaaaattgcataaaatctcgcaaaagagacctataatcgtt 34494572  T
Q  101 ga 102  Q
    ||    
T  34494573 ga 34494574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1021066 - 1021229
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||    
T  1021066 cgggtgggccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataatt 1021165  T
Q  101 gannnnnnnnnnnnnc-cgggt-gagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  1021166 gattttttaatttttctcgggtggggccgtggcccaccccagcccatgaagggctccgccactg 1021229  T

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Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 31392706 - 31392606
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||    
T  31392706 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacttataatcgttg 31392607  T
Q  102 a 102  Q
    |    
T  31392606 a 31392606  T

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Target: chr2; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 44545730 - 44545888
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||| ||||| |||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||     
T  44545730 gtgggccattacaccactttgcaagaatttggatcaaccaaaatataaaaccgacacaaaattgtataaaatatcgcaaaatagacctataatcgttgat 44545829  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                |||||||  ||||||||||||||| ||||||||||||||||||||||    
T  44545830 ttttttatttttccgggtggaccgtggcccaccccaacccatgaagggctccgccactg 44545888  T

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Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 11764951 - 11764853
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||    
T  11764951 gtggaccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaagttgtataaaatcttgcaaaatagacctataatcgttga 11764853  T

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Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7366311 - 7366210
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||| |||||    
T  7366311 cgggtgggccactacaccactttgcaggaatttggatcaagcaaaacataaaactcacacaaaattgcataaaatctcgcaaaatagacctatagtcgtt 7366212  T
Q  101 ga 102  Q
    ||    
T  7366211 ga 7366210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12995126 - 12995025
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| | |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  12995126 cgggtgggccactacaccaatttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgtt 12995027  T
Q  101 ga 102  Q
    ||    
T  12995026 ga 12995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 26860661 - 26860761
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| |||||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  26860661 gggtgggccactacaccactttgtagaaatttggatcaaccaaaacataaaaccgacacgaaattgcataaaatctcgcaaaatagacctataattgttg 26860760  T
Q  102 a 102  Q
    |    
T  26860761 a 26860761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 42016643 - 42016562
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||    
T  42016643 tttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcacaaaatagacctataatcgttga 42016562  T

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Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43471452 - 43471553
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||||| |||||||  |||||| |||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  43471452 cgggtggactactacaccactttgcgagaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgtt 43471551  T
Q  101 ga 102  Q
    ||    
T  43471552 ga 43471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 41699324 - 41699243
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  41699324 tttgcgggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttga 41699243  T

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Target: chr2; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 3836347 - 3836431
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctata 94  Q
    |||||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3836347 cactacaccacttcgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagatctata 3836431  T

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Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2249854 - 2249759
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  2249854 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 2249759  T

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Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6749891 - 6749986
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||| |||||||    
T  6749891 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 6749986  T

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Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11765067 - 11764972
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| ||||| |  |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  11765067 cgggtggaccactacaccaatttgcgggaatttggatcagctgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11764972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 11935375 - 11935473
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||| ||||||||| ||||| |  |||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  11935375 gggtgggccactacaccactttacgagaatttggatcaaccaaaatctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcgtt 11935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 42016775 - 42016681
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| || |||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  42016775 gggtgggccgctacaccaatttgcgggaatttggatcaaccaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42016681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 13615850 - 13615943
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||||| | ||||| | ||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  13615850 ggtgggccactacaccaatttgcggaaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13615943  T

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Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 44545616 - 44545709
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  44545616 ggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 38527445 - 38527361
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    |||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||    
T  38527445 gggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 38527361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16194525 - 16194430
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| | ||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  16194525 cgggtgggctactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 16194430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 17526052 - 17526123
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||| ||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||    
T  17526052 aatttagatcaactaaaacctaaaactgacactaaattgtataaaatctcgcaaaatagatctataatcgtt 17526123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23869936 - 23869841
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||| | |||||||    
T  23869936 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatatacctataat 23869841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26293433 - 26293338
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  26293433 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 26293338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36436067 - 36436162
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  36436067 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36436162  T

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Target: chr2; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 34983540 - 34983454
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34983540 cactacaccaatttgctggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 34983454  T

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Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 28745380 - 28745473
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||  |||||||| || ||||||  |||||||||||||||||||| |||||||    
T  28745380 ggtgggccactacaccaatttgcgggaatttagatcaaccaaaatctaaaaccggcataaaattatataaaatctcgcaaaatagacctataat 28745473  T

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Target: chr2; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 7366421 - 7366329
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||| ||||||| |||||| | |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  7366421 gtgggccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatgtataat 7366329  T

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Target: chr2; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 38763960 - 38763892
Alignment:
Q  28 gaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  38763960 gaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 38763892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 1114931 - 1115018
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||||||||||| |||||||| |||| ||||| | ||| ||||||| |||||||||||||||||||| |||||||    
T  1114931 ccactacaccaatttgcaggaatttggatcaaccgaaacctaaaatcaacataaaattgtataaaatctcgcaaaatagacctataat 1115018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 11935262 - 11935355
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||| ||||| ||||||| ||||||| |||||||| |||  ||||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  11935262 ggtgggccaatacaccactttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaacctcgcaaaatagacctataat 11935355  T

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Target: chr2; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 32100084 - 32099992
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||||| ||||||  |||||||||||||||| |||| |||||| |||||||||||| ||||||||||| ||| || | |||| ||||||    
T  32100084 accactacaccactttgtgggaatttagatcaaccgaaacctaaaactgacacaaaattgtataaaatctcgtaaagtatacctatgatcgtt 32099992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 3836232 - 3836319
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||  ||||||| ||||||| |||||||  |||| |||||| |||| ||||||| |||||||||| |||||||||||||||||    
T  3836232 ccactacatcactttgcgggaattttgatcaactgaaacctaaaacagacataaaattgtataaaatctcacaaaatagatctataat 3836319  T

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Target: chr2; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26860547 - 26860642
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||  | ||||| | ||||  |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26860547 cgggtgggccactacatcaatttgcggaaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26860642  T

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Target: chr2; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31392819 - 31392724
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | |||||  |||||  |||||| | |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  31392819 cgggtgggccactacaccaatttgcgagaattgggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31392724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 1020963 - 1021048
Alignment:
Q  11 actacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| | ||||| |||||||  ||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  1020963 actacaccaatttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctctcaaaatagacctataat 1021048  T

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Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 2077643 - 2077562
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagat 89  Q
    |||||||| | ||||||  ||||||||||||| || |||  ||||||||||||||||||| ||| |||||||||||||||||    
T  2077643 accactaccccactttgtgggaatttagatcagccgaaagctaaaaccgacacaaaattgtatagaatctcgcaaaatagat 2077562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12995239 - 12995144
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| | |||||  ||||||| |||| ||||||||||| ||| ||| |||||||||  ||||||||| |||||||    
T  12995239 cgggtggaccactacaccaatttgcggaaatttgaatcaaccgaaacctaaaaccgacataaatttgtataaaatcttacaaaatagacctataat 12995144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 42473605 - 42473566
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccg 156  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42473605 cgggtgagccgtggcccaccccagcccatgaagggctccg 42473566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 31643610 - 31643696
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||||| |||| ||||||| |||||||  ||||  | |||| ||||||||||| ||||||| ||||||||||| ||||||||    
T  31643610 gggtggaccaccacaccactttgcgggaatttgaatcaggcgaaacttaaaaccgacataaaattgtataaaatctcgtaaaataga 31643696  T

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Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 26769493 - 26769459
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  26769493 tccggtgtccgtgtccgtatccgtgcttcataggt 26769459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 27447084 - 27447118
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  27447084 tccggtgtccgtgtccgtatccgtgcttcataggt 27447118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 12995007 - 12994975
Alignment:
Q  129 ggcccaccccagcccatgaagggctccgccact 161  Q
    |||||||||||||||||||||||||||||||||    
T  12995007 ggcccaccccagcccatgaagggctccgccact 12994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 21374777 - 21374809
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  21374777 tccggtgtccgtgtccgtatccgtgcttcatag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 29035408 - 29035496
Alignment:
Q  11 actacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgt 99  Q
    ||||||| |||||||   |||||||||||||| |||| ||||| ||||||||| ||| | |||||||| |||| |||| |||| |||||    
T  29035408 actacaccactttgcgaaaatttagatcaaccgaaacctaaaatcgacacaaagttgtagaaaatctcacaaagtagacctatgatcgt 29035496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 27084258 - 27084229
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||||||||||||||||||||||||||    
T  27084258 gtgtccgtgtccgtatccgtgcttcatagg 27084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 34494597 - 34494634
Alignment:
Q  125 ccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  34494597 ccgtggcccaccctagcccatgatgggctccgccactg 34494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 37558967 - 37558938
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||||||||||||||||||||||||||    
T  37558967 gtgtccgtgtccgtatccgtgcttcatagg 37558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 31284024 - 31283992
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||||||||| |||||||||||    
T  31284024 tccggtgtccgtgtccgtatctgtgcttcatag 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 44770207 - 44770235
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  44770207 gtgtccgtgtccgtatccgtgcttcatag 44770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 7e-49; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41837953 - 41838114
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41837953 cgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 41838052  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||| | |||||||||||||||||||||||||||||||||||||||    
T  41838053 gattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 41838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 3886787 - 3886942
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||          
T  3886787 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 3886886  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
           |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  3886887 aatttttccgggtgaaccgtggcctaccccagcccatgaagggctccgccactgcc 3886942  T

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Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 7012497 - 7012337
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||| |||    
T  7012497 gggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataagatatcgcaaaatagacctataatcattg 7012398  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7012397 attttttaatttttccgagtgagccgtggcccaccccagcccatgaagggctccgccactg 7012337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 24797053 - 24797213
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  24797053 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttg 24797152  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             |||| || |||||||||||||||||||||||||||||||||||||||    
T  24797153 atttttaaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 24797213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4231380 - 4231220
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4231380 cgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgtt 4231281  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||              |||||| |||||||||||||| ||||||||||||| ||||||||||    
T  4231280 gattttttaattttt-cgggtgggccgtggcccaccctagcccatgaaggggtccgccactg 4231220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 5590173 - 5590330
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  5590173 gggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttg 5590272  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    |             ||||||| |||||||||||||||||||||| |||||||||||||    
T  5590273 attttttaatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 5590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 9830760 - 9830607
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||          
T  9830760 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaagttgcataaaatctcgcaaaataaacctataatcgttgatttttt 9830661  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
            |||||| |||||||||||||||||||||||||||||||||||||||    
T  9830660 aattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 9830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42556092 - 42556193
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42556092 cgggtgggccactgcaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 42556191  T
Q  101 ga 102  Q
    ||    
T  42556192 ga 42556193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3659821 - 3659982
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||  ||||||||||    
T  3659821 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacgtaaacctgacacaaaattgcataaaatctcgcaaaatagacttataatcgtt 3659920  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| || |||||||| |||||||||||||||||||||||||||    
T  3659921 gattttataatttttccgggtgggctgtggcccatcccagcccatgaagggctccgccactg 3659982  T

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Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6317037 - 6316877
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||    
T  6317037 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataattgtt 6316938  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccact 161  Q
    ||              |||||| ||||||||||||||||||||||||| ||||||||||||    
T  6316937 gattttttaattttttcgggtgggccgtggcccaccccagcccatgaaaggctccgccact 6316877  T

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Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22658345 - 22658446
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22658345 cgggtgggccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgtt 22658444  T
Q  101 ga 102  Q
    ||    
T  22658445 ga 22658446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28565045 - 28564944
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28565045 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 28564946  T
Q  101 ga 102  Q
    ||    
T  28564945 ga 28564944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28572668 - 28572567
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28572668 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 28572569  T
Q  101 ga 102  Q
    ||    
T  28572568 ga 28572567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38567290 - 38567127
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||    
T  38567290 cgggtgggccactacacaactttgcaggaatttggatcaacaaaaacataaaatcaacacaaaattgcataaaatctcgcaaaatatacctataatcgtt 38567191  T
Q  101 gannnnnnnnnnnnncc-gggtgagccgtggccca-ccccagcccatgaagggctccgccactg 162  Q
    ||             || ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  38567190 gattttttaatttttcctgggtgggccgtggcccacccccagcccatgaagggctccgccactg 38567127  T

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Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 1183982 - 1183884
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||| ||||||||| |||||  ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1183982 gggtggtccactacactactttttaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatctataatcgtt 1183884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 21434997 - 21434899
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||||||    
T  21434997 gtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaacctcgcaaaataaacctataatcgttga 21434899  T

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Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2317222 - 2317121
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||| ||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  2317222 cgggtgggccattacaccactttgcatgaatttggatcaaccaaaacataaaaccaacacaaaattgtataaaatctcgcaaaatagacctataatcgtt 2317123  T
Q  101 ga 102  Q
    ||    
T  2317122 ga 2317121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7242633 - 7242734
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| |||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  7242633 cgggtgggccactataccattttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgtt 7242732  T
Q  101 ga 102  Q
    ||    
T  7242733 ga 7242734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 43117497 - 43117408
Alignment:
Q  13 tacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  43117497 tacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttga 43117408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 7413191 - 7413091
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  7413191 gggtgggccactacaccactttgcgggaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttg 7413092  T
Q  102 a 102  Q
    |    
T  7413091 a 7413091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10092415 - 10092315
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| | ||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  10092415 cgggtgggccactacaccattttgcaggaatttggatcaactaaaacaaaaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 10092316  T
Q  101 g 101  Q
    |    
T  10092315 g 10092315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1098218 - 1098057
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||  |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||| |||| |||||||||||    
T  1098218 cgggtgggccactacaccactttataggaatttggatcaaccaaaacataaaactgatacaaaattgcataaaatatcgcaaattagacctataatcgtt 1098119  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| ||||||||||||| ||  |||||||||||||||||||||    
T  1098118 gattttttaatttttccgggtgggccgtggcccacctcacgccatgaagggctccgccactg 1098057  T

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Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 36060510 - 36060417
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||    
T  36060510 ccactacaccactttccaggaatttggatcaaccaaaacataaaattgacacaaaattgcataaaatctcgcaaaatatacctataatcgttga 36060417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41388166 - 41388065
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||| |||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||| |||||||| | ||||||| |||    
T  41388166 cgggtggatcactacaccactttgcaggaatttggataaaccaaatcataaaaccgacacaaaattgtataaaatcttgcaaaataaacctataatagtt 41388067  T
Q  101 ga 102  Q
    ||    
T  41388066 ga 41388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 4697959 - 4697891
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatct 77  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4697959 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatct 4697891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5590059 - 5590154
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  5590059 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 5590154  T

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Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36060631 - 36060536
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  36060631 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36060536  T

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Target: chr8; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25642731 - 25642823
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    ||||||||||||| ||| |||||||  |||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||    
T  25642731 cgggtggaccacttcaccactttgcgagaatttggatcaaccaaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacctat 25642823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7242521 - 7242608
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  7242521 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 7242608  T

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Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43117623 - 43117528
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| |||||| || | ||||||||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  43117623 cgggtgggccactaaaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 43117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 21435112 - 21435018
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  21435112 gggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 21435018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 38567395 - 38567306
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcg 98  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  38567395 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcg 38567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7012611 - 7012516
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||| | | ||||| ||||||| |||||||  |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  7012611 cgggtggaccactactccaatttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7012516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28565158 - 28565063
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  28565158 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28565063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28572781 - 28572686
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  28572781 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28572686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 197343 - 197265
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgt 99  Q
    ||||||| ||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  197343 tttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 197265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 312180 - 312102
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgt 99  Q
    ||||||| ||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  312180 tttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 312102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7422047 - 7422148
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||  ||||| | ||||||| |||||||| |||  ||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  7422047 cgggtgggtcactacatcacttttcgggaatttggatcaaccgaaatctaaaaccgacacaaaattgtataaaatctcgcaaaataaacctataatcgtt 7422146  T
Q  101 ga 102  Q
    ||    
T  7422147 ga 7422148  T

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Target: chr8; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 41169969 - 41169877
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| ||||||| ||||||| ||| ||||||||| || |||||||| ||||||  |||||||||||||||||||| |||||||    
T  41169969 gtgggccactacaccactttgcgggaatttggattaaccaaaacctagaaccgacataaaattatataaaatctcgcaaaatagacctataat 41169877  T

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Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 1184088 - 1184001
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||| |||| |||||||    
T  1184088 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaattagacctataat 1184001  T

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Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2317335 - 2317240
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| |||||||||| | ||||| ||||||| |||||||| |||  ||||||||||| ||||||| ||||||| |||||||||||| |||||||    
T  2317335 cgggtgaaccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 2317240  T

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Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 3886686 - 3886761
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||  ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  3886686 tttgcgggaattgggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 3886761  T

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Target: chr8; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4698072 - 4697985
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| ||| |||| |||  ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  4698072 ccactacaccaatttgcgggaatttggataaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 4697985  T

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Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 10092508 - 10092433
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||| |||| |||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  10092508 tttgcgggaatttggatctaccaaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 10092433  T

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Target: chr8; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22658232 - 22658327
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||  ||||||  |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  22658232 cgggtgggccactacaccaatttgtgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22658327  T

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Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24796939 - 24797034
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| | ||||| |||||||| |||| ||||| ||||| ||||||| ||||||||||||||| || |||||||||    
T  24796939 cgggtggaccactacaccaatttgcggtaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaattatatctataat 24797034  T

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Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42555979 - 42556074
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| |  |||| ||||||| |||||||| |||  ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  42555979 cgggtgggccactacaccaaattgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42556074  T

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Target: chr8; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 1098327 - 1098236
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| | ||||||| ||||| |||||||| |||| |||||| |||| ||| ||| |||||||||| ||||||||| |||||||    
T  1098327 tggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaactgacataaatttgtataaaatctcacaaaatagacctataat 1098236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41388279 - 41388184
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| | ||||||| | ||||| |||||||  ||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  41388279 cgggtgggctactacaccaatttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 41388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 41837848 - 41837935
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||| | |||||||    
T  41837848 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 41837935  T

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Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 4231484 - 4231398
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| ||||||||||| |||||||| |||||||    
T  4231484 cactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgtaaaatagacctataat 4231398  T

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Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 34934370 - 34934415
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  34934370 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 34934415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 3659716 - 3659803
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| | ||||| |||||||| |||| ||||||||| | ||||||| |||||||||||||||| ||| |||||||    
T  3659716 ccactacaccaatttgcggaaattttgatcaaccgaaacctaaaaccgatataaaattgtataaaatctcgcaaaacagacctataat 3659803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6317150 - 6317055
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||| || |||| ||||| ||||| ||||||| ||||| |||||||||||| | |||||||    
T  6317150 cgggtgggccactacaccaatttgcgggaatttggatcatccgaaacctaaaatcgacataaaattgtataaattctcgcaaaataaaactataat 6317055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7413305 - 7413211
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||  |||||||  ||||||| |||| ||||||||||| |||| || ||||||||||| |||||||| |||||||    
T  7413305 cgggtggactactacaccactttgagggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 7413211  T

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Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 8996475 - 8996424
Alignment:
Q  35 gatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  8996475 gatcaacctaaacttaaaaccgacacaaaattgcataaaatctcgtaaaata 8996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41169849 - 41169771
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    |||||||| |||||||  ||||||||||||||| |||| ||||||||||||||||||   |||||| ||| ||||||||    
T  41169849 cactacaccactttgcgtgaatttagatcaacctaaacctaaaaccgacacaaaattatttaaaatatcgtaaaataga 41169771  T

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Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 1183860 - 1183823
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccact 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1183860 gccgtggcccaccccagcccatgaagggctccgccact 1183823  T

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Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25383055 - 25383135
Alignment:
Q  19 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||| ||||||| ||||| |||||||||||||||| |  |||||||||||||||||||| ||||| |||||    
T  25383055 actttgcgagaatttggatcaactaaaacctaaaaccgacacaaaa-tatataaaatctcgcaaaatagacctatagtcgtt 25383135  T

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Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 32017978 - 32018073
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||| | ||||||  | ||||| || ||||| |||  ||||| ||||||||||||| ||||||||||  |||||||| |||||||||||    
T  32017978 tggaccactacgccactttgtggaaatttggaccaaccgaaatctaaaatcgacacaaaattgtataaaatctcttaaaatagacctataatcgtt 32018073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 10092292 - 10092255
Alignment:
Q  127 gtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10092292 gtggcccaccccagcccatgaagggctccgtcactgcc 10092255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 11635803 - 11635758
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||    
T  11635803 cgggtgggtcgtggcccaccctagcccatgaagggctccgccactg 11635758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11635920 - 11635819
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  ||||| || ||||||| | ||||| |||||  | |||| ||||||||||||||||||  ||||||| |||||||||||| |||| ||| ||    
T  11635920 cgggtgggtcactagaccactttgcggaaatttggatcagtcgaaacctaaaaccgacacaaaattatataaaatttcgcaaaatagacctatgatcatt 11635821  T
Q  101 ga 102  Q
    ||    
T  11635820 ga 11635819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 17836580 - 17836503
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    ||||||||  ||||||||| || || ||||| || |||| ||||||||||||||||||| |||||||||  |||||||    
T  17836580 ccactacatcactttgcagaaacttggatcacccgaaacctaaaaccgacacaaaattgtataaaatcttacaaaata 17836503  T

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Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 3951609 - 3951644
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3951609 gtatctggtgtccgtgtccgtatccgtgcttcatag 3951644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 20785544 - 20785574
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||    
T  20785544 cggtgtccgtgtccgtatccgtgcttcatag 20785574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 24413646 - 24413675
Alignment:
Q  172 ggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||||||||||||||||||    
T  24413646 ggtgtccgtgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 36450823 - 36450852
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||||||||||||||||||||||||||    
T  36450823 gtgtccgtgtccgtatccgtgcttcatagg 36450852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 5137490 - 5137518
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  5137490 gtgtccgtgtccgtatccgtgcttcatag 5137518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 43737896 - 43737928
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||| |||||||||||||||||    
T  43737896 tccggtgtccgtgtctgtatccgtgcttcatag 43737928  T

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Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 11650964 - 11651125
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11650964 cgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 11651063  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||| | |||||||||||||||||||||||||||||||||||||||    
T  11651064 gattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 11651125  T

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Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6755989 - 6755828
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  6755989 cgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 6755890  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6755889 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6755828  T

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Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 13233389 - 13233229
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  13233389 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaaatagatctataatcgttg 13233290  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             ||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  13233289 attttttaatttttccgggtgggccgtggcccaccccagcctatgaaggactccgccactg 13233229  T

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Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 2654917 - 2655067
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnn 109  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||           
T  2654917 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaactagatctataatcgttgatttttta 2655016  T
Q  110 nnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccac 160  Q
           |||||| |||||||||||||||||||||||||||||||||||||    
T  2655017 attttttcgggtgggccgtggcccaccccagcccatgaagggctccgccac 2655067  T

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Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 40228431 - 40228592
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga- 102  Q
    |||| ||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  40228431 gtgggccactacaacactttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgat 40228530  T
Q  103 nnnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
                 ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40228531 tttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 40228592  T

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Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18491347 - 18491184
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||    
T  18491347 cgggtggggcactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattacataaaatctcacaaaatagacctataatcgtt 18491248  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||             ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18491247 gattttttaatttttccgagtgggccgtggcccaccccagcccatgaagggctccgccactgcc 18491184  T

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Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16925266 - 16925106
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  16925266 cgggtggaccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaagtctcgcaaattagacctataatcgtt 16925167  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||||||  |||||||||||||| |||||||||||||||||||||||    
T  16925166 gattttttaatttttccgggtggaccgtggcccacccc-gcccatgaagggctccgccactg 16925106  T

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Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36584583 - 36584422
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| | |||||||  ||    
T  36584583 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaactaacacaaaattgcataaaatctcgcaaaatatacctataattatt 36584484  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36584483 ga-ttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 36584422  T

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Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44134653 - 44134493
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| | | |||||||||||||||||| ||||||||| |||||||||||    
T  44134653 cgggtggatcactacaccactttgcaggaatttggatcaaccaaaacataaaaccaata-aaaattgcataaaatctcacaaaatagacctataatcgtt 44134555  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||||||  ||||||||||||||||||||||||||||||||||||||    
T  44134554 gattttttaatttttccgggtggaccgtggcccaccccagcccatgaagggctccgccactg 44134493  T

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Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 44817555 - 44817708
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    |||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||          
T  44817555 ccactataccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatttcgaaaaatagacctatagtcgttgatttttt 44817654  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           ||||||| |||||||||||||||||||||||||||||||||||||||    
T  44817655 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 44817708  T

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Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36955008 - 36955109
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  36955008 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 36955107  T
Q  101 ga 102  Q
    ||    
T  36955108 ga 36955109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 44745591 - 44745748
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  44745591 gtgggccactgcaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgat 44745690  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccact 161  Q
                | || || |||||||||||||||||||||| || ||||||||||||    
T  44745691 tttttaatttttctggatgggccgtggcccaccccagcccattaaaggctccgccact 44745748  T

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Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12700566 - 12700667
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| | |||||||||||    
T  12700566 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaagtctcgcaaaataaacctataatcgtt 12700665  T
Q  101 ga 102  Q
    ||    
T  12700666 ga 12700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38141555 - 38141719
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||  || |||||||||||||||||||||||||||||| |||||||||||    
T  38141555 cgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaattgatacaaaattgcataaaatctcgcaaaatagacctataatcgtt 38141654  T
Q  101 ga-nnnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||              ||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  38141655 gatttttttaatttttccgggtgggccgtggccctccccagcccatgaagggctccgccagtgcc 38141719  T

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Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45670120 - 45670019
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  45670120 cgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattacataaaatctcgcaaaataaacctataatcgtt 45670021  T
Q  101 ga 102  Q
    ||    
T  45670020 ga 45670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 19653645 - 19653803
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||| ||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||     
T  19653645 gtgggccattacactattttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacctataatcgttgat 19653744  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                | | ||| |||||||||||||||||||||||||||||||||||||||    
T  19653745 ttttttatttttcggtgtgggccgtggcccaccccagcccatgaagggctccgccactg 19653803  T

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Target: chr4; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 31581751 - 31581909
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||      
T  31581751 gtgggccattacactactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctagcaaaatagacctataatcgttgtt 31581850  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                | |||||  ||||||||||||||||||||||||||||| ||||||||    
T  31581851 tttttaatttttcggggtggaccgtggcccaccccagcccatgaagggcttcgccactg 31581909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 41832535 - 41832437
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||    
T  41832535 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattgcataaaatcttgcaaaatagacatataatcgtt 41832437  T

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Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 31664165 - 31664322
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    | |||||||| ||    
T  31664165 cgggtgggccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgactcaaaattgcataaaatctcgcaaa----acctataatcatt 31664260  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31664261 gattttttaatttttccgggtgggccgtggcccaccccatcccatgaagggctccgccactg 31664322  T

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Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 13613091 - 13613191
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| |||| |||| |||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  13613091 gggtgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttg 13613190  T
Q  102 a 102  Q
    |    
T  13613191 a 13613191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 43564569 - 43564477
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||    
T  43564569 cactacaacactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatatcgcaaaatagacctataatcgttga 43564477  T

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Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 27270512 - 27270353
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||| | ||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||| |||    
T  27270512 gggtgggccactacaccactttacgggaattttgatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcattg 27270413  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             ||||||| || ||||||||||||||||||||||||||||||||||||    
T  27270412 a-ttttttaattttccgggtgggctgtggcccaccccagcccatgaagggctccgccactg 27270353  T

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Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 50767193 - 50767093
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||| | ||||| |||||| |||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  50767193 gggtgggccactacaccactttgcggaaatttggatcaatcaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgttg 50767094  T
Q  102 a 102  Q
    |    
T  50767093 a 50767093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 54795728 - 54795828
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||| ||||||| |||||| |||||  ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  54795728 gggtgggccactacaccactttgcgggaatttggatcaatcaaaatctaaaaccgacacaaaattgtataaaatcttgcaaaatagacctataatcgttg 54795827  T
Q  102 a 102  Q
    |    
T  54795828 a 54795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 44134764 - 44134671
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  44134764 ggtgggccactacactaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44134671  T

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Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13233503 - 13233408
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||||   ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  13233503 cgggtggaccactacaccgatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13233408  T

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Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13612977 - 13613072
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  13612977 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 13613072  T

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Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 52581606 - 52581515
Alignment:
Q  11 actacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| | |||||||||| |||||||||||||    
T  52581606 actacaccactttgcaggaatttggatcaactaaaacatgaaaccgacacaaaactccataaaatattgcaaaatagacctataatcgttga 52581515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18491460 - 18491367
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctata 94  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  18491460 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 18491367  T

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Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 10096344 - 10096436
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||||||||||| |||||| | |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  10096344 gtgggccactacaccattttgcaggaatttggatcaatcgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 10096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 44745478 - 44745562
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    |||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  44745478 gtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 44745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 6756094 - 6756007
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||||||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  6756094 ccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaatagtataaaatctcgcaaaatagacctataat 6756007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 22647270 - 22647189
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaa 84  Q
    |||||| ||||||||| |||||||| |||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  22647270 gggtgggccactacaccactttgcatgaatttggatcaacaaaaatataaaac-gacacaaaattgcataaaatctcgcaaaa 22647189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51001635 - 51001475
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| | ||||| ||||||  |||||||| |||| |||||  |||| ||||||| ||||||| | ||||||||||  ||||| ||||    
T  51001635 cgggtggaccactacaccaatttgcgggaattg-gatcaaccgaaacctaaaaaagacataaaattgtataaaatattgcaaaatagacttataaacgtt 51001537  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  51001536 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 51001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 4632711 - 4632803
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    ||||||||| ||||||| ||||||| |||||||| |||  ||||||  ||||||||||| ||||||||||||||||||||  |||||||||||    
T  4632711 ccactacaccactttgcgggaatttggatcaaccgaaatctaaaactaacacaaaattgtataaaatctcgcaaaatagacttataatcgttg 4632803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 10096463 - 10096555
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||||| ||||||| | ||||| |||||||| |||| ||||||||||||||||||  |||||||||||||||||  | |||||||||||||    
T  10096463 cactacaccactttgcggaaatttggatcaaccgaaacttaaaaccgacacaaaattatataaaatctcgcaaaatgaacctataatcgttga 10096555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 12700460 - 12700548
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  12700460 accactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 12700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16925379 - 16925284
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| | ||||| |||||||| |||| ||||||||||| ||| ||| |||||||||| ||||||||| |||||||    
T  16925379 cgggtggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 16925284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27270626 - 27270532
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||| |||||||  ||||||| |||| ||||||||||| |||| || ||||||||||| ||||||||||||||||    
T  27270626 cgggtggactactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagatctataat 27270532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31664052 - 31664147
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||  ||||||||| |||||||||| |||||||    
T  31664052 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattttataaaatcttgcaaaatagacctataat 31664147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 36584688 - 36584601
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | || || ||||||| ||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  36584688 ccactacaccaattagcgggaatttggatcaactaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36954895 - 36954990
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| || |||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  36954895 cgggtgggccactacaccaatttgcggggatttggatcaaccgaaacgtaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36954990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 38141450 - 38141537
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  38141450 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 38141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41832650 - 41832555
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | |||||  |||||  |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  41832650 cgggtgggccactacaccaatttgcgagaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 41832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 43564683 - 43564604
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  43564683 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 43564604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 44817438 - 44817530
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||||||||||| |||||| | |||  ||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  44817438 gtgggccactacaccaatttgcaggaatttggatcaatcgaaatctaaaaccgacataaaattgtataaaatctcgcagaatagacctataat 44817530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 4632590 - 4632681
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    |||||| ||||||||| |||| || | |||||||||||||| || | ||||| ||||||||||||| ||| |||||||||||||||| ||||    
T  4632590 gggtggtccactacaccacttggcggaaatttagatcaaccgaatcctaaaatcgacacaaaattgtatataatctcgcaaaatagacctat 4632681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 9046131 - 9046178
Alignment:
Q  53 accgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9046131 accgacacaaaattgtataaaatctcgcaaaatagatctataatcgtt 9046178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 11650859 - 11650946
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||| | |||||||    
T  11650859 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 11650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 31581655 - 31581730
Alignment:
Q  21 tttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  31581655 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 31581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54795614 - 54795708
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||| |||||||  ||||||| |||| ||||||||||| |||| || ||||||||||| |||||||| |||||||    
T  54795614 cgggtggactactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 54795708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7638755 - 7638848
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctata 94  Q
    ||||||| ||||||||| |||||||  |||||| | ||| || |||| ||||| ||||||||||||| ||||||||| ||||||||||| ||||    
T  7638755 cgggtgggccactacaccactttgcgagaatttgggtcagccgaaacgtaaaatcgacacaaaattgtataaaatcttgcaaaatagatttata 7638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13857772 - 13857687
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    ||||||| ||||||||| ||||| ||| ||||| ||||| || |||| ||||||| ||||||||||| |||||||||| |||||||    
T  13857772 cgggtgggccactacaccactttacagaaatttggatcagccgaaacttaaaaccaacacaaaattgtataaaatctcacaaaata 13857687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 50767305 - 50767213
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||| ||||||| |||||||  ||||||| |||| ||||||||||| |||| || ||||||||||| |||||||| |||||||    
T  50767305 ggtggactactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 50767213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13869302 - 13869215
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||||||| ||  ||||||||| ||||| ||||| || |||| |||||||||||||||||   |||||||||| |||||||||    
T  13869302 cgggtggaccactgcatcactttgcagaaatttggatcagccgaaacctaaaaccgacacaaaatgatataaaatctcacaaaataga 13869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36801859 - 36801946
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| ||||||||| | ||| | ||||||| | ||| || |||| ||||||||||||||||||  ||||||||||||||||||||    
T  36801859 cgggtgggccactacactattttacgggaatttggttcagccgaaacctaaaaccgacacaaaattatataaaatctcgcaaaataga 36801946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 22647383 - 22647289
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||| | ||| | |||||||  ||||||| |||| ||||||  ||| ||||||| |||||||||||||||||||| |||||||    
T  22647383 gggtgggccactacaccaatttccgggaatttgaatcaaccgaaacctaaaacaaacataaaattgtataaaatctcgcaaaatagacctataat 22647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10393983 - 10393895
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagat 89  Q
    ||||||| ||||||||| ||||||  | |||||  ||||  | |||| ||||||||||||||||||  |||||||||||||||||||||    
T  10393983 cgggtgggccactacaccactttgtggaaatttgaatcagacgaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagat 10393895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2654795 - 2654890
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| | ||||  |||||||| |||  ||||||||||  ||||||| ||||||||||  |||||||| |||||||    
T  2654795 cgggtggaccactacaccaatttgcggaaattgggatcaaccgaaatctaaaaccgacgtaaaattgtataaaatctcataaaatagacctataat 2654890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 19653534 - 19653624
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| | ||||  ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||| | ||||||| |||||||    
T  19653534 tggaccactacaccaatttgtgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcac-aaatagacctataat 19653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18735344 - 18735241
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaatt----gcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||  | ||||||||| |||| |||| |   ||||||||||||||    | |||||||||||||||||||| |||||||    
T  18735344 cgggtggacgactacaccactttgtggaaatttagattaaccgaaacctgtcaccgacacaaaattaattgtataaaatctcgcaaaatagacctataat 18735245  T
Q  97 cgtt 100  Q
    ||||    
T  18735244 cgtt 18735241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 22647148 - 22647110
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22647148 gccgtggcccacctcagcccatgaagggctccgccactg 22647110  T

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Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 5111624 - 5111587
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5111624 gtatccggtgtccgtgcccgtatccgtgcttcataggt 5111587  T

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Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 36955136 - 36955169
Alignment:
Q  129 ggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||||||||||||||||||||||||    
T  36955136 ggcccaccccagcccatgaagggctccgccactg 36955169  T

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Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 52581724 - 52581644
Alignment:
Q  6 ggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    |||||||||||| | ||||  | ||||| |||| ||| |||| ||||||||||| ||||||| ||||||||||| ||||||    
T  52581724 ggaccactacaccaatttgtggaaatttggatctaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaata 52581644  T

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Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40228315 - 40228402
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| ||||||||  | |||||  |||||| |||||||| |||| |||||| |||| ||||| | |||||||||||| |||||||    
T  40228315 cgggtgggccactacaacaatttgcgagaatttggatcaaccgaaacctaaaactgacataaaatcgtataaaatctcgccaaataga 40228402  T

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Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 13857650 - 13857612
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  13857650 gccgtggcccaccctagcccatgaagggcttcgccactg 13857612  T

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Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 13869180 - 13869142
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  13869180 gccgtggcccaccctaacccatgaagggctccgccactg 13869142  T

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Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18669093 - 18668990
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaatt----gcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||  | ||||||||| |||| |||| |   ||||||||||||||    | ||||||||||||||| |||| |||||||    
T  18669093 cgggtggacgactacactactttgtggaaatttagattaaccgaaacctgtcaccgacacaaaattaattgtataaaatctcgcaaagtagacctataat 18668994  T
Q  97 cgtt 100  Q
    ||||    
T  18668993 cgtt 18668990  T

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Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 203
Target Start/End: Original strand, 22234954 - 22234984
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||    
T  22234954 gtgtccgtgtccgtatccgtgcttcataggt 22234984  T

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Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 23293069 - 23293103
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||||||||||||||| |||||||||||||    
T  23293069 tccggtgtccgtgtccgtatctgtgcttcataggt 23293103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 28470375 - 28470341
Alignment:
Q  167 tatccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||| ||||||||||||||||||||    
T  28470375 tatccggtgtccgtatccgtatccgtgcttcatag 28470341  T

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Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 37203254 - 37203220
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||| ||||||||||||||||||    
T  37203254 tccggtgtccgtgtccatatccgtgcttcataggt 37203220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 52581492 - 52581455
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  52581492 gccgtggcccaccc-agcccatgaagggctccgccactg 52581455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 4157131 - 4157102
Alignment:
Q  172 ggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||||||||||||||||||    
T  4157131 ggtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 20633458 - 20633429
Alignment:
Q  172 ggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||||||||||||||||||    
T  20633458 ggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 11110754 - 11110786
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||| |||||||||||||||||    
T  11110754 tccggtgtccgtgtcggtatccgtgcttcatag 11110786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26653141 - 26653217
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaa 84  Q
    ||||| |||| |||||  || ||||| ||| | ||||||  ||||||||||||||| ||| ||||||||||||||||    
T  26653141 accaccacaccactttatagaaatttggattagccaaaatttaaaaccgacacaaagttgtataaaatctcgcaaaa 26653217  T

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Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 46084049 - 46084081
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||| ||||||||||    
T  46084049 tccggtgtccgtgtccgtatccatgcttcatag 46084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3631419 - 3631256
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  3631419 cgggtgggccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 3631320  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3631319 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 3631256  T

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Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16823291 - 16823133
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16823291 cgggtgggtcactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 16823192  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    ||             |||| || ||||||||||||||||||||||||||||||||||||    
T  16823191 gattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgcca 16823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9737704 - 9737865
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9737704 cgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 9737803  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
     |             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  9737804 aattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 9737865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25701418 - 25701579
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  25701418 cgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattacataaaatcttgcaaaatagatctataatcgtt 25701517  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||| || |||||||||||||||||||||||||||||||||||||||    
T  25701518 gattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 25701579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 26525235 - 26525388
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||          
T  26525235 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcaaaaaatctcgcaaaatagacctataatcgttgatttttt 26525334  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           ||||||| |||||||||||||||||||||||||||||||||||||||    
T  26525335 tatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 43358570 - 43358410
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43358570 cgggtgggtcactacactactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 43358471  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccact 161  Q
    ||             ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  43358470 gattttttcatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccact 43358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7440478 - 7440579
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7440478 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 7440577  T
Q  101 ga 102  Q
    ||    
T  7440578 ga 7440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 30773038 - 30772878
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  30773038 gggtgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttg 30772939  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |              ||||||||||||||||||||||| ||||||||||||||||||||||    
T  30772938 attttttaattttttcgggtgagccgtggcccaccccaacccatgaagggctccgccactg 30772878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 43348793 - 43348635
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||     
T  43348793 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgtta 43348694  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccac 160  Q
    |             ||||||| |||||||||| ||||||||||||||||||||||||||    
T  43348693 attttttaatttttccgggtgggccgtggcccgccccagcccatgaagggctccgccac 43348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 8074237 - 8074398
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  8074237 gggtggaccactacactactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttg 8074336  T
Q  102 a-nnnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |              || |||| |||||||||||||||||||||||||||||||||||||||    
T  8074337 attttttaaaattttccaggtgggccgtggcccaccccagcccatgaagggctccgccactg 8074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29390429 - 29390273
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||    
T  29390429 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgtaaaatacacctataatcgtt 29390330  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgc 157  Q
    ||             || |||| ||||||||||||||||||||||||||||||||||    
T  29390329 gattttttaatttttccaggtgggccgtggcccaccccagcccatgaagggctccgc 29390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 15374274 - 15374174
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15374274 gggtggaccattacaccactttgcaagaatttcgatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttg 15374175  T
Q  102 a 102  Q
    |    
T  15374174 a 15374174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 9596164 - 9596264
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9596164 gggtgggccactacaccactttgcagaaatttggatcaactaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacatataatcgttg 9596263  T
Q  102 a 102  Q
    |    
T  9596264 a 9596264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 32304651 - 32304751
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  32304651 gggtgggccaatacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgtaaaatagacttataatcgttg 32304750  T
Q  102 a 102  Q
    |    
T  32304751 a 32304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 13013280 - 13013413
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnnnnnnnnccgggtgagccgt 128  Q
    ||||| |||||||||||||||||||| || |||||||||| |||||||||||||| |||| |||||||||||||             ||||||| |||||    
T  13013280 aatttggatcaaccaaaacataaaactgatacaaaattgcttaaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgt 13013379  T
Q  129 ggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||||||||||||||||||||||||    
T  13013380 ggcccaccccagcccatgaagggctccgccactg 13013413  T

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Target: chr5; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7440365 - 7440458
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctata 94  Q
    ||||||| ||||||||| | ||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  7440365 cgggtgggccactacaccaatttgcaggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 7440458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 19577181 - 19577339
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||| ||||||||| ||||||| ||||||| ||||||||||||  || |||||||||||||||| ||||||| | |||||||||||||||||||||| |     
T  19577181 gtgggccactacaccactttgcgggaatttggatcaaccaaaatctagaaccgacacaaaattgtataaaatgttgcaaaatagatctataatcgtt-aa 19577279  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
                ||||||| |||||||||||||  |||||||||||||||||||||||||    
T  19577280 ttttttatttttccgggtgggccgtggcccaccttagcccatgaagggctccgccactgc 19577339  T

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Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 10925667 - 10925568
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||| |||||||| |||||||||||||||| ||||  ||||||||||||    
T  10925667 ggtggaccactacaccactttgtaggaatttgaatcaactaaaacataaaaccgatacaaaattacataaaatctcgcaaattagacatataatcgttga 10925568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30773152 - 30773057
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  30773152 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 30773057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 20656859 - 20656956
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||||||| | ||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||| |||||    
T  20656859 tggaccactacaccaatttgcggaaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgtaaattagacctataattgttga 20656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3631532 - 3631437
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  3631532 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacttaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 3631437  T

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Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5844266 - 5844104
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| |||| |||| | ||||||  ||||| ||||||||||||||||||| |||||| |||||||||||||||| | |||||||| |||||||||||    
T  5844266 cgggtgggccaccacaccattttgcaataatttggatcaaccaaaacataaaatcgacaccaaattgcataaaatctagtaaaatagacctataatcgtt 5844167  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             |||| || ||||| |||||||||| ||||| |||||||||||||||||    
T  5844166 gattttttaatttttccggatgtgccgtagcccaccccaacccattaagggctccgccactgc 5844104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16823404 - 16823309
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  16823404 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcatataaaatctcgcaaaatagatctataat 16823309  T

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Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 41084587 - 41084738
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||| | ||||| |||||| |||||| ||||| ||||||||||||  |||||||||||||||||||| |||||||||||||          
T  41084587 ccactacaccactttgcggaaatttggatcaatcaaaacctaaaatcgacacaaaattctataaaatctcgcaaaatagacctataatcgttgatttttt 41084686  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           |||||||  ||  ||||||||||||||||||||||||||||||||||    
T  41084687 aatttttccgggtggacc--ggcccaccccagcccatgaagggctccgccactg 41084738  T

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Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 26297014 - 26297167
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||  |||| |||| |||||||||| ||||||| |||||          
T  26297014 ccactacaccactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattatataagatcttgcaaaatagacctataattgttgatttttt 26297113  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
            ||||||  |||||||||| |||||| ||||||||||||||||||||    
T  26297114 aattttttcgggtggaccgtggcccatcccagctcatgaagggctccgccactg 26297167  T

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Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 13084668 - 13084741
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  13084668 aatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttga 13084741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9596050 - 9596145
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | |||||||||||||  ||||||  |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  9596050 cgggtgggccactacaccaatttgcaggaatttgaatcaacacaaacctaaaaccgacataaaattgtataaaatctcacaaaatagatctataat 9596145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 20487124 - 20487033
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||||||||||||| ||||| || |||| ||||||||||||||||||| ||||||||| |||||||| | |||| ||||||    
T  20487124 ccactacaccactttgcaggaatttggatcagccgaaacctaaaaccgacacaaaattgtataaaatcttgcaaaatatacctatgatcgtt 20487033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32304537 - 32304632
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||| | ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  32304537 cgggtgggccactacaccaatttccgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32304632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43348907 - 43348812
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  43348907 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 43348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 8074131 - 8074218
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| |||||||  ||||||| |||| |||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  8074131 ccactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacattaaattgtataaaatctcgcaaaatagatttataat 8074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25701306 - 25701400
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||  ||||||| |||||||| |||| |||||||||||  |||||| |||||||||||||||||||| |||||||    
T  25701306 cgggtggaccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgaca-taaattgtataaaatctcgcaaaatagacctataat 25701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26525114 - 26525209
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||  |||| | ||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26525114 cgggtgggccactacaccaatttgcgggaatttggatcaactgaaaccttaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41817613 - 41817526
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||||  |||||| ||||| |||||| ||||||| ||||||| ||||    
T  41817613 cgggtgggccactacaccactttgcagaaatttggatcaaccaaaatctaaaactgacactaaattgtataaaatatcgcaaagtaga 41817526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 43358682 - 43358588
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||| | ||||| ||||||| ||||||||  ||| |||||| |||| ||||||| |||||||||||||||||| | |||||||    
T  43358682 gggtgggccactacaccaatttgcgggaatttggatcaaccgtaacctaaaacagacataaaattgtataaaatctcgcaaaataaacctataat 43358588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 10925776 - 10925687
Alignment:
Q  7 gaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||| | |||||   ||||| |||||||| |||| ||||||||||| ||| ||| |||||||||| |||||||||||||||||    
T  10925776 gaccactacaccaatttgccaaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagatctataat 10925687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 26785095 - 26785010
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctata 94  Q
    ||||||||| | ||||| ||||||| |||||||  |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||    
T  26785095 ccactacaccaatttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctata 26785010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37042551 - 37042643
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    ||||||| ||| ||| | ||||||| |||||||  ||||||| |||  ||||||||| | ||||||| |||||||||||||||||||||||||    
T  37042551 cgggtgggccaatacgccactttgcgggaatttgaatcaaccgaaatctaaaaccgatataaaattgtataaaatctcgcaaaatagatctat 37042643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13013139 - 13013234
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||| || | ||||| | ||||| |||||||| | || ||||||||||| ||| ||| |||||||||| ||||||||| |||||||    
T  13013139 cgggtggaccactataccaatttgcggaaatttggatcaaccgatacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 13013234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 28662162 - 28662117
Alignment:
Q  116 ccgggtgagccgtggcccaccccagcccatgaagggctccgccact 161  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  28662162 ccgggtgggccgtggcccaccccagcccataaagggctccgccact 28662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 41084468 - 41084560
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||| ||||||| |||||||  || |||| |||| ||||||||||| |||| || ||||||||||| |||||||| |||||||    
T  41084468 ggtggactactacaccactttgcgggaatttgaattaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 41084560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13084527 - 13084622
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||| || | ||||| | ||||| |||||||  | || ||||||||||| ||| ||| |||||||||| ||||||||| |||||||    
T  13084527 cgggtggaccactataccaatttgcggaaatttggatcaactgatacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 13084622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 20071215 - 20071310
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||| |||||   | |||||  ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| |||| ||||||||    
T  20071215 tggaccactacaccactttatggaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcgtt 20071310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26296893 - 26296987
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| ||||||| |||||||  ||||||| |||  ||||||||||| |||| || ||||||||||| |||||||  |||||||    
T  26296893 cgggtggactactacaccactttgcgggaatttgaatcaaccgaaatctaaaaccgacataaaaatgtataaaatctcg-aaaataggcctataat 26296987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 26784957 - 26784910
Alignment:
Q  116 ccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||    
T  26784957 ccgggtgggccgtggcccacctaagcccatgaagggctccgccactgc 26784910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 22578939 - 22579017
Alignment:
Q  8 accactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    |||||||||| |||||   ||||||| ||||| || |||| ||||||||||||||||||| | ||||||||| ||||||    
T  22578939 accactacaccactttatgggaatttggatcagccgaaacctaaaaccgacacaaaattgtacaaaatctcgtaaaata 22579017  T

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Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 34276833 - 34276795
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggtagta 207  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34276833 tccggtatccgtgtccgtatccgtgcttcataggtagta 34276795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 15382453 - 15382420
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||||||||||||||||||||||||||||||    
T  15382453 tccggtgtccgtgtccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 13287482 - 13287522
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgc-ttcataggtagtaa 208  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  13287482 tccggtgtccgtgtccgtatccgtgctttcataggtagtaa 13287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 6229071 - 6229109
Alignment:
Q  116 ccgggtgagccgtggcccaccccagcccatgaagggctc 154  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  6229071 ccgggtgggctgtggcccaccccagcccatgaagggctc 6229109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 8420014 - 8419985
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttca 198  Q
    ||||||||||||||||||||||||||||||    
T  8420014 tccggtgtccgtgtccgtatccgtgcttca 8419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 17177103 - 17177140
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  17177103 gtatctggtgtctgtgtccgtatccgtgcttcataggt 17177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 21522726 - 21522693
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  21522726 tccggtgaccgtgtccgtatccgtgcttcatagg 21522693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 21533292 - 21533259
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  21533292 tccggtgaccgtgtccgtatccgtgcttcatagg 21533259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 22579048 - 22579089
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgcc 158  Q
    |||||||| |||||||||||| ||||||||||||| ||||||    
T  22579048 cgggtgagtcgtggcccaccctagcccatgaagggatccgcc 22579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 28662234 - 28662185
Alignment:
Q  44 aaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    |||| ||||||  ||||||||||| ||||||||||| |||||||||||||    
T  28662234 aaacttaaaactaacacaaaattgtataaaatctcgtaaaatagatctat 28662185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 32426935 - 32426968
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    |||||||||||||||||||||| |||||||||||    
T  32426935 tccggtgtccgtgtccgtatccatgcttcatagg 32426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 41995450 - 41995417
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcat 199  Q
    |||||| |||||||||||||||||||||||||||    
T  41995450 gtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 6401474 - 6401442
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||| |||||||||||||||||    
T  6401474 tccggtgtccgtgtctgtatccgtgcttcatag 6401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 6770517 - 6770485
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||| ||||||||||||||||||||||    
T  6770517 cggtgtccgtatccgtatccgtgcttcataggt 6770485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 9596280 - 9596320
Alignment:
Q  118 gggtgagccgtggcccaccccagcccatgaagggctccgcc 158  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  9596280 gggtgggccgtggcccaccccagcctttgaagggctccgcc 9596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 20683357 - 20683325
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||| ||||    
T  20683357 tccggtgtccgtgtccgtatccgtgctttatag 20683325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 23016074 - 23016106
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||| |||||||||||||||||||||||||||    
T  23016074 tccggagtccgtgtccgtatccgtgcttcatag 23016106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 30050144 - 30050188
Alignment:
Q  56 gacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||||||| ||||||| ||| |||||||| |||||||||||    
T  30050144 gacacaaaattgtataaaatatcgtaaaatagacctataatcgtt 30050188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 43001790 - 43001762
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  43001790 gtgtccgtgtccgtatccgtgcttcatag 43001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16692946 - 16693108
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  16692946 cgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgtt 16693045  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||             ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16693046 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 16693108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 33012054 - 33012212
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  33012054 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcgtt 33012153  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    ||             ||||||| ||||||||||||||||||||||||||||||||||||    
T  33012154 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcca 33012212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 919709 - 919868
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  919709 ggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 919808  T
Q  103 nnnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                 |||| || ||||||||||||||||||||||||||||||||| |||||    
T  919809 tttttaaatttttccggatgggccgtggcccaccccagcccatgaagggctccgtcactg 919868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17285291 - 17285452
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||    
T  17285291 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatataaaattgcataaaatctcgcaaattagacctataatcgtt 17285390  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17285391 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 17285452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42372130 - 42371969
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||    
T  42372130 cgggtggaccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcatt 42372031  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             | ||||| ||||||||||||||||  |||||||||||||||||||||    
T  42372030 gattttttaatttttctgggtgggccgtggcccaccccaatccatgaagggctccgccactg 42371969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 8530241 - 8530082
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||| |||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  8530241 ggtgggccactacaccactttgcaagaatttggatcaaccagaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 8530142  T
Q  103 nnnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                  |||||| |||||||||||||||||||||||||||||||||||||||    
T  8530141 ttttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 8530082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44052456 - 44052615
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| |||||| |||||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  44052456 cgggtgggtcactacaccactttgtaggaatttggatcaatcaaaacataaaaccaacacaaaattacataaaatctcgcaaaatagacctataatcgtt 44052555  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccac 160  Q
    ||             |||||||||||||||||||||||||||||||||||||||||||||    
T  44052556 gatttttaaatttttccgggtgagccgtggcccaccccagcccatgaagggctccgccac 44052615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45837004 - 45836903
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  45837004 cgggtggaccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaatatagacctataatcgtt 45836905  T
Q  101 ga 102  Q
    ||    
T  45836904 ga 45836903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6849913 - 6849752
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||| || |||||  |||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||    
T  6849913 cgggtgggccactacaccactttgtagaaatttgaatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaaattagacctataatcgtt 6849814  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6849813 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6849752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 24790595 - 24790434
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| |||||    
T  24790595 cgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaacagacttatagtcgtt 24790496  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             | ||||| | |||||||||| ||||||||||||||||||| ||||||    
T  24790495 gatttttttatttttctgggtgggtcgtggcccactccagcccatgaagggctccaccactg 24790434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 29170101 - 29169940
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| | ||||||| |||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  29170101 gggtgggctactacaccactttgtaggaatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttg 29170002  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    |             ||||||| || |||||||||||||||||||||||||||||||||||||    
T  29170001 attttttaatttttccgggtgggctgtggcccaccccagcccatgaagggctccgccactgc 29169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29981704 - 29981865
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| || |||| |||| |||||||||||    
T  29981704 cgggtgggccactacaccactttgcaggaatttggataaaccaaaacttaaaaccgacacaaaattgcataaaatatcacaaagtagacctataatcgtt 29981803  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||| || |||||||||||||||||||||||||||||||||||||||    
T  29981804 gattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 29981865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 40428781 - 40428879
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  40428781 gtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatagtcgttga 40428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51139846 - 51139745
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  51139846 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgtt 51139747  T
Q  101 ga 102  Q
    ||    
T  51139746 ga 51139745  T

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Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 24544718 - 24544816
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  24544718 gtgggccactacaccactttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttga 24544816  T

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Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 25299087 - 25299181
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatc 97  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  25299087 ggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaagttgcataaaatctcgcaaaatagacctataatc 25299181  T

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Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8086390 - 8086289
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| |||||    
T  8086390 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaacctacataaaattgcataaaatctagcaaaatagatctatagtcgtt 8086291  T
Q  101 ga 102  Q
    ||    
T  8086290 ga 8086289  T

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Target: chr1; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44317727 - 44317626
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||||||||||    
T  44317727 cgggtgggccactacaccactttacaggaatttagatcaaccaaaacataaaatcaacacaaaattacataaaatctcgcaaaatagacctataatcgtt 44317628  T
Q  101 ga 102  Q
    ||    
T  44317627 ga 44317626  T

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Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 37125835 - 37125692
Alignment:
Q  19 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnnnnnnnnccg 118  Q
    ||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||| |||||||||||| |||||||||||||             |||    
T  37125835 actttgcaggaatttggatcaaccaaaacgtaaaactgacgcaaaattgcataaaatatcgcaaaatagacctataatcgttgattttataatttttccg 37125736  T
Q  119 ggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  37125735 ggtgggccgtggcccacctcagcccatgaagggctccgccactg 37125692  T

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Target: chr1; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46224757 - 46224856
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  46224757 cgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatacaaaattgcataaaatctcgcaaaatagatttataatcgtt 46224856  T

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Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 47561878 - 47561726
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnn 109  Q
    |||||||  ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||           
T  47561878 cactacatcactttgcagtaatttggatcaaccaaaacataaaacctacacaaaattgcataaaatatcgcaaaatagacctataatcgttgattttttt 47561779  T
Q  110 nnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
          ||||||| |||||||||||||| | || |||||||||||||||||||    
T  47561778 atttttccgggtgggccgtggcccacccaaacctatgaagggctccgccactg 47561726  T

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Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 48708416 - 48708515
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| ||| | |||||||||||||||||||||||||||| |||||||||||||    
T  48708416 ggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatataaaattgcataaaatctcgcaaaatagacctataatcgttga 48708515  T

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Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 23177501 - 23177401
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||| ||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||  |||||||||||    
T  23177501 gggtgggccactacaccactttgcagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaaatagacttataatcgttg 23177402  T
Q  102 a 102  Q
    |    
T  23177401 a 23177401  T

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Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40567126 - 40567042
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat 85  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  40567126 cgggtgggccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaat 40567042  T

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Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40567239 - 40567144
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  40567239 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 40567144  T

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Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45837117 - 45837022
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | |||||||||||||  ||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  45837117 cgggtggaccactacaccaatttgcaggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 45837022  T

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Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29981591 - 29981686
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||| || | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  29981591 cgggtggaccactataccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29981686  T

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Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 33011949 - 33012036
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33011949 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgcataaaatctcgcaaaatagacctataat 33012036  T

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Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40428665 - 40428760
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  40428665 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagaactataat 40428760  T

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Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47562000 - 47561905
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| |||||||||||| |||||||    
T  47562000 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcgcaaaatagacctataat 47561905  T

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Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 9042424 - 9042576
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||| ||| || |||||||||||||||||| ||| |||| |||||||  ||||          
T  9042424 ccactacaccactttgtaggaatttggatcaaccaaaacataaaatcgatac-aaattgcataaaatctcgtaaattagacctataattattgatttttt 9042522  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
           |||| || ||||||||||| |||||||||||||||||||||||||||    
T  9042523 aatttttccggatgggccgtggcccagcccagcccatgaagggctccgccactg 9042576  T

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Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 42372242 - 42372148
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||||| | ||||||||||||| |||||||| |||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  42372242 gggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 42372148  T

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Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 48708310 - 48708396
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  48708310 cactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 48708396  T

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Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 46224646 - 46224739
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| ||||||||| | ||||| ||||||| |||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46224646 ggtgggccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 46224739  T

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Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 8086500 - 8086408
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  8086500 gtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 8086408  T

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Target: chr1; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16692833 - 16692928
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  16692833 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 16692928  T

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Target: chr1; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25298972 - 25299067
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||  ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  25298972 cgggtgggccactacactaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 25299067  T

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Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 24790701 - 24790613
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaacc-aaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  24790701 ccactacaccaatttgcgggaatttggatcaacccaaaacgtaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 24790613  T

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Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 23177611 - 23177528
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||||||| | ||||| ||||||| |||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  23177611 tggaccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaataga 23177528  T

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Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51139959 - 51139864
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| | |||||||||||||||| | |||||||    
T  51139959 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtaaaaaatctcgcaaaataaacctataat 51139864  T

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Target: chr1; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 919595 - 919689
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||| ||||||| | ||||| ||||||| ||||||   |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  919595 gggtggactactacaccaatttgctggaatttggatcaatggaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 919689  T

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Target: chr1; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 17285179 - 17285273
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||| | ||||| | ||||| |||||||| |||| ||||||||||  ||||||| |||||||||| ||||||||| |||||||    
T  17285179 gggtggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 17285273  T

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Target: chr1; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 9246901 - 9246994
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatc 97  Q
    |||| ||||||||| ||||||   |||||| ||| | || |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9246901 gtgggccactacaccactttgtgagaatttggataagccgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatagatctataatc 9246994  T

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Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6850026 - 6849931
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||||| || | ||||||| ||||| |||||||| |||| ||||||||| | ||| ||| |||||||||| |||||||||||||||||    
T  6850026 cgggtgaaccactatactaatttgcagaaatttggatcaaccgaaacctaaaaccgatataaatttgtataaaatctcacaaaatagatctataat 6849931  T

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Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24542672 - 24542759
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24542672 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542759  T

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Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24542786 - 24542873
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24542786 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542873  T

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Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24542900 - 24542987
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24542900 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542987  T

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Target: chr1; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543014 - 24543101
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543014 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543101  T

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Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543128 - 24543215
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543128 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543215  T

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Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543242 - 24543329
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543242 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543329  T

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Target: chr1; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543356 - 24543443
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543356 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543443  T

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Target: chr1; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543470 - 24543557
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543470 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543557  T

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Target: chr1; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543584 - 24543671
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543584 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543671  T

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Target: chr1; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543698 - 24543785
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543698 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543785  T

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Target: chr1; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543812 - 24543899
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543812 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543899  T

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Target: chr1; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24543926 - 24544013
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24543926 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544013  T

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Target: chr1; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544040 - 24544127
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544040 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544127  T

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Target: chr1; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544154 - 24544241
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544154 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544241  T

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Target: chr1; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544268 - 24544355
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544268 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544355  T

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Target: chr1; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544382 - 24544469
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544382 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544469  T

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Target: chr1; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544496 - 24544583
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544496 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544583  T

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Target: chr1; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24544610 - 24544697
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  24544610 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 37125958 - 37125871
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| |||||| || | ||||||| |||||||||||||||||||| |||||||    
T  37125958 ccactacaccaatttgcgggaattttgatcaaccgaaacctaaaactgatataaaattgtataaaatctcgcaaaatagacctataat 37125871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44052343 - 44052438
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | |||||  ||||||  |||||||||||| ||||||||||| ||||||  |||||||||| ||||||||| |||||||    
T  44052343 cgggtgggccactacaccaatttgcgagaatttgaatcaaccaaaacctaaaaccgacataaaattctataaaatctcacaaaatagacctataat 44052438  T

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Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 9042304 - 9042398
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||| | ||||| | ||||| |||||||| |||| ||||||||||  ||| ||| |||||||||| ||||||||| |||||||    
T  9042304 gggtggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacttaaatttgtataaaatctcacaaaatagacctataat 9042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29170215 - 29170120
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||| |||| ||| | ||||| | ||||| |||||||| |||| ||||||||||| ||| ||| |||||||||| ||||||||| |||||||    
T  29170215 cgggtggatcactgcaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 29170120  T

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Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32540591 - 32540690
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||| ||||| ||||||  |  |||| ||| |||| |||| ||||||||||||||||||| ||||||||||| |||||||| ||||| |||||    
T  32540591 cgggtgggccattacaccactttgtggatatttggataaaccgaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagacctatagtcgtt 32540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37343147 - 37343082
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaatt 66  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||    
T  37343147 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaatt 37343082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 48548045 - 48548080
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggta 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  48548045 tccggtgtccgtgtccgtatccgtgcttcataggta 48548080  T

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Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 48708538 - 48708577
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  48708538 gccgtggctcaccccagcccatgaagggctccgccactgc 48708577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8530362 - 8530288
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaat 75  Q
    ||||||||||||| ||| | ||||| ||||||  |||||||| |||| ||||||||||| ||||||| |||||||    
T  8530362 cgggtggaccactgcaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacagaaaattgtataaaat 8530288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 45836887 - 45836854
Alignment:
Q  129 ggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||||||||||||||||||||||||    
T  45836887 ggcccaccccagcccatgaagggctccgccactg 45836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 10577818 - 10577850
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  10577818 tccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 17879973 - 17880021
Alignment:
Q  116 ccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||||||| |||||| |||||||||||||||||||||||| ||| |||||    
T  17879973 ccgggtgggccgtgacccaccccagcccatgaagggctctgcccctgcc 17880021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 25934604 - 25934572
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  25934604 tccggtgtccgtgtccgtatccgtgcttcatag 25934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 37343063 - 37343027
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccac 160  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37343063 gccgtggccgaccccagcccatgaagggctccgccac 37343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 38078739 - 38078771
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  38078739 tccggtgtccgtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 46224874 - 46224918
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgccact 161  Q
    ||||||  ||||||||||||||| |||||||||||||||||||||    
T  46224874 cgggtggaccgtggcccaccccaacccatgaagggctccgccact 46224918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 21852153 - 21852062
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||| ||  ||||| |||||| | |||  |||||| |||||||||||| ||||||||||||||| || | |||| ||||||    
T  21852153 ccactacaccactttacaaaaatttggatcaatcgaaatctaaaacggacacaaaattgtataaaatctcgcaaagtatacctatcatcgtt 21852062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 24334778 - 24334812
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||| ||||||||||||    
T  24334778 tccggtgtccgtgtccgtatccatgcttcataggt 24334812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 49001483 - 49001575
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaa--tctcgcaaaatagatctataat 96  Q
    ||||||||||||| ||||| | ||||||| |||||| | |||| || |||||||| ||||||| ||||||  |||||||||||| | |||||||    
T  49001483 tggaccactacaccactttacgggaatttggatcaa-ctaaacctagaaccgacataaaattgtataaaatctctcgcaaaatatacctataat 49001575  T

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Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 398848 - 398881
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    ||||||||||| ||||||||||||||||||||||    
T  398848 tccggtgtccgcgtccgtatccgtgcttcatagg 398881  T

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Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 17831605 - 17831642
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  17831605 gtatccggtgtctgtgtctgtatccgtgcttcataggt 17831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 35919358 - 35919394
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcataggtagtaat 209  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  35919358 gtgtcagtgtccgtatctgtgcttcataggtagtaat 35919394  T

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Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 43532478 - 43532514
Alignment:
Q  124 gccgtggcccaccccagcccatgaagggctccgccac 160  Q
    |||||||||||||||| |||||| |||||||||||||    
T  43532478 gccgtggcccaccccaacccatggagggctccgccac 43532514  T

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Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 51410009 - 51409981
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  51410009 gtgtccgtgtccgtatccgtgcttcatag 51409981  T

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Target: scaffold0014 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 65094 - 64933
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  65094 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgtt 64995  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |              ||||||| |||||||||||||||||||||||||||||||||||||||    
T  64994 gtttttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 64933  T

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Target: scaffold0014; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 65321 - 65226
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||  |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  65321 cgggtgggccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 65226  T

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Target: scaffold0014; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 65207 - 65112
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||  |||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  65207 cgggtgggccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 65112  T

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Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26873863 - 26873702
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||    
T  26873863 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcatt 26873764  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| |||||||||||||||||||||||||||||||||||||||    
T  26873763 gattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26873702  T

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Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 36358309 - 36358469
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  36358309 gggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatgtcgcaaaatagatctataatcgttg 36358408  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |             || ||||  ||||||||||||||||||||||||||||||||||||||    
T  36358409 attttttaatttttccaggtggaccgtggcccaccccagcccatgaagggctccgccactg 36358469  T

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Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44468019 - 44468177
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44468019 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 44468118  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    ||             || |||| ||||||||||||||||||| ||||||||||||||||    
T  44468119 gattttttaatttttccaggtgggccgtggcccaccccagcctatgaagggctccgcca 44468177  T

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Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46027840 - 46027679
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46027840 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 46027741  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||||||  |||||||||||||||||||| |||||||||||||||||    
T  46027740 gattttttaatttttccgggtggaccgtggcccaccccagcccacgaagggctccgccactg 46027679  T

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Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 17167025 - 17166869
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  17167025 gggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataattgttg 17166926  T
Q  102 annnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcc 158  Q
    |             | ||||| |||||||||||||||||||||||||||||||||||    
T  17166925 attttttaatttttctgggtgggccgtggcccaccccagcccatgaagggctccgcc 17166869  T

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Target: chr7; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 43859247 - 43859089
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgann 104  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | || |||||||||||||      
T  43859247 tggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattcgacctataatcgttgatt 43859148  T
Q  105 nnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
               || |||| |||||||||||||| |||||||||||||||||||||||||    
T  43859147 ttttaatttttccaggtgggccgtggcccaccctagcccatgaagggctccgccactgc 43859089  T

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Target: chr7; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44724061 - 44724223
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | ||||||| |||    
T  44724061 cgggtgggcctctacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgtataaaatctctcaaaataaacctataatagtt 44724160  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    |              ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44724161 ggttttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 44724223  T

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Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36675485 - 36675646
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  36675485 cgggtgggccactacatcactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagatctataatcatt 36675584  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
     |              ||| || |||||||||||||||||||||||||||||||||||||||    
T  36675585 aattttttaattttttcggatgggccgtggcccaccccagcccatgaagggctccgccactg 36675646  T

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Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22723774 - 22723875
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  22723774 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaagtagacctataatcgtt 22723873  T
Q  101 ga 102  Q
    ||    
T  22723874 ga 22723875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31065621 - 31065722
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31065621 cgggtggaccactacaccactttgcaggaatttggattaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgtt 31065720  T
Q  101 ga 102  Q
    ||    
T  31065721 ga 31065722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31428897 - 31428796
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  31428897 cgggtggaccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgtt 31428798  T
Q  101 ga 102  Q
    ||    
T  31428797 ga 31428796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 45350199 - 45350051
Alignment:
Q  13 tacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnnnnnn 112  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||              
T  45350199 tacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttttaatt 45350100  T
Q  113 nnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
       |||||||  |||||||||| |||||||||||||||||||||||||||    
T  45350099 tttccgggtggaccgtggccca-cccagcccatgaagggctccgccactg 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29075183 - 29075284
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  29075183 cgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacctatagtcgtt 29075282  T
Q  101 ga 102  Q
    ||    
T  29075283 ga 29075284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23469394 - 23469481
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23469394 cgggtggacaactacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaataga 23469481  T

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Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 9624155 - 9624055
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||| |||| |||| |||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  9624155 gggtgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttg 9624056  T
Q  102 a 102  Q
    |    
T  9624055 a 9624055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 42241936 - 42242028
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||||||    
T  42241936 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaattaaacctataatcgttga 42242028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39976481 - 39976380
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  39976481 cgggtgggtcactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacatataatcgtt 39976382  T
Q  101 ga 102  Q
    ||    
T  39976381 ga 39976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 44142914 - 44142821
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  44142914 ccactacaccactttgcaggaatttggatcaaagaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttga 44142821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 16834283 - 16834438
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |  ||||||| | |||||||||||||          
T  16834283 ccactacaccactttgcagaaatttggatcaaccaaaacataaaactgacacaaaattgcataaaattttacaaaataaacctataatcgttgatttttt 16834382  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
           |||| || ||| |||||||||||||||||||||||||||||||| ||||    
T  16834383 tatttttccggatgggccatggcccaccccagcccatgaagggctccgccagtgcc 16834438  T

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Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 18104325 - 18104417
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||||||| | ||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18104325 ccactacaccaatttgcgggaatttggatcaaccaaaacatgaaaccgacacaaaattgcat-aaatctcgcaaaatagacctataatcgttga 18104417  T

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Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 31931910 - 31932010
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    |||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||| ||||||||||||    
T  31931910 gggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataatcgttg 31932009  T
Q  102 a 102  Q
    |    
T  31932010 a 31932010  T

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Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36358195 - 36358290
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  36358195 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 36358290  T

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Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23562646 - 23562806
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||||| ||||||| | ||||| |||||| |||||| |||  | |||||||||||| ||||||||||||||||||||||||||||||||    
T  23562646 cgggtggactactacaccactttgcggaaatttggatcaatcaaaacttaattc-gacacaaaattgtataaaatctcgcaaaatagatctataatcgtt 23562744  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             || |||| ||| |||||||||||||| ||||||||||||||||||||    
T  23562745 gattttttaatttttccaggtgggccatggcccaccccagctcatgaagggctccgccactg 23562806  T

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Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8461859 - 8461760
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| |||||| |||| ||||||| ||||||| |||||||||||| |||||||||||    
T  8461859 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaacagacataaaattgtataaaatatcgcaaaatagacctataatcgtt 8461760  T

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Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9624269 - 9624174
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  9624269 cgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 9624174  T

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Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 41367815 - 41367724
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| |||||| || ||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||| |||| |||||||    
T  41367815 tggaccactacaccactttgtagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaattagacctataat 41367724  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17167140 - 17167045
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||  | ||||| ||||||  |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  17167140 cgggtggaccactacatcaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 17167045  T

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Target: chr7; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31065508 - 31065603
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||| ||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  31065508 cgggtgggccactgcaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31065603  T

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Target: chr7; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31429010 - 31428915
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||| | |||||| ||||||||  |||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  31429010 cgggtggaccactacaccaatttacgggaattgagatcaactgaaacctaaaaccgacataaaattttataaaatctcgcaaaatagatctataat 31428915  T

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Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36675372 - 36675467
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||  ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  36675372 cgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36675467  T

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Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43859364 - 43859269
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||||| ||||| |||||||| |||| ||||||||||  ||||||| |||||||||| ||||||||| |||||||    
T  43859364 cgggtggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 43859269  T

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Target: chr7; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44143034 - 44142939
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||| |||||  ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  44143034 cgggtgggccactacaccaatttgcgggaatttggatcaatcaaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44142939  T

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Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 22499778 - 22499875
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||| ||||||||| ||||||| ||||||||||| |||| |||| ||||||||| | ||||||| ||||||| |||||||||||| |||| ||||||    
T  22499778 ggtgggccactacaccactttgcgggaatttagattaaccgaaacctaaaaccgatataaaattgaataaaatttcgcaaaatagacctatgatcgtt 22499875  T

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Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 40055743 - 40055666
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    ||||||||| ||||  || |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  40055743 ccactacaccacttatcaagaatttggatcaaccaaaacatacaaccgatacaaaattgcataaaatctcgcaaaata 40055666  T

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Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 46828837 - 46828926
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctat 93  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||| ||| ||||||| ||||||| | |||||||||||||||||| ||||    
T  46828837 gtggaccactacaccactttgcgggaatttggatcaaccgaaacctaataccgacataaaattgtacaaaatctcgcaaaatagacctat 46828926  T

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Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22723661 - 22723756
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| |||| || |||||||| |||  ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  22723661 cgggtgggccactacaccaatttgcgggaaattggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22723756  T

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Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42241814 - 42241909
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| ||||||| | ||| | ||||||| |||||||| |||  ||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  42241814 cgggtggacgactacaccaatttccgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 42241909  T

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Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 44723956 - 44724043
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||  ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  44723956 ccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44724043  T

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Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 46027953 - 46027858
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||  |||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  46027953 cgggtgggccactacaccaatttgcgggaatttggatcaacctaaatctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 46027858  T

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Target: chr7; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 40055863 - 40055769
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||| ||||| ||| | ||||| ||||||| |||||||| |||| |||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  40055863 gggtgggccactgcaccaatttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 40055769  T

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Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 44467908 - 44468001
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||| | ||||| ||||||| ||||||   |||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  44467908 ggtggaccactacaccaatttgcgggaatttggatcaattgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44468001  T

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Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 23469289 - 23469376
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||  |||||||  |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  23469289 ccactacaccaatttgcgggaattgggatcaacagaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 23469376  T

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Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 29075098 - 29075165
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  29075098 aatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29075165  T

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Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45350324 - 45350229
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||  |||||||| | ||||| |||||||  ||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  45350324 cgggtgggacactacaccaatttgcgggaatttgaatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 45350229  T

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Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41367932 - 41367838
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataa 95  Q
    |||||||| |||||||| | ||||| | ||||| ||||||| ||||| ||||||||||| ||| ||| |||||||||| ||||||||| ||||||    
T  41367932 cgggtggatcactacaccaatttgcggaaatttggatcaactaaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataa 41367838  T

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Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25174307 - 25174223
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat 85  Q
    ||||||||||||||||| ||||||   |||||| |||||||| |||| ||||||| ||||| ||||  |||||||||||||||||    
T  25174307 cgggtggaccactacaccactttgtgagaatttggatcaaccgaaacctaaaaccaacacataattatataaaatctcgcaaaat 25174223  T

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Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 22566606 - 22566665
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||| ||||| || |||| ||||||||||||||||||| ||||||||||||||||||||    
T  22566606 aatttggatcagccgaaacttaaaaccgacacaaaattgtataaaatctcgcaaaataga 22566665  T

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Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26873976 - 26873881
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||| | |||  |||||| |||| ||||||| |||||| |||||||| |||| |||||||    
T  26873976 cgggtggaccactacaccaatttgcgggaatttggatcaatcgaaatctaaaactgacataaaattgtataaaacctcgcaaattagacctataat 26873881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39976594 - 39976499
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||| ||| ||||| ||||||   |||  ||||||||||| ||| ||| |||||||||| |||||||||||||||||    
T  39976594 cgggtggaccactacaccaatttacagaaatttggatcaattgaaatctaaaaccgacataaatttgtataaaatctcacaaaatagatctataat 39976499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 29502138 - 29502293
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||| ||||||| ||||   | |||| ||||||| ||||||||||| ||||||||| |||||||| | |||| |||||| |          
T  29502138 ccactacaccactttgcgggaatttggatctgtcgaaacctaaaaccaacacaaaattgaataaaatcttgcaaaatatacctattatcgttaatttttt 29502237  T
Q  109 nnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactgcc 164  Q
            |||||| || ||||||||||| |||||||||||||||||||| |||||    
T  29502238 aaatttttcgggtgggctgtggcccaccctagcccatgaagggctccgccgctgcc 29502293  T

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Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 40054340 - 40054298
Alignment:
Q  120 gtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  40054340 gtgagccgtggcccaccccagcccatggagggttccgccactg 40054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 9014427 - 9014390
Alignment:
Q  126 cgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9014427 cgtggcccaccacagcccatgaagggctccgccactgc 9014390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 19692504 - 19692467
Alignment:
Q  125 ccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||| |||||||||||||||||||||||||||||||    
T  19692504 ccgtggtccaccccagcccatgaagggctccgccactg 19692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 29662977 - 29662932
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  29662977 cgggtgggccgtagcccaccctagcccatgaagggctccgccactg 29662932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 9778484 - 9778452
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  9778484 tccggtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14629643 - 14629726
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaa 84  Q
    ||||||||||||||||| |||||||||| |||| |||| |||||||  |||||  | |||||| ||   |||||||||||||||    
T  14629643 cgggtggaccactacaccactttgcagggatttggatctaccaaaaactaaaatagtcacaaatttttttaaaatctcgcaaaa 14629726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 40883394 - 40883343
Alignment:
Q  49 taaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||||||||||| || ||||||||||||| |||||| ||||| |||||    
T  40883394 taaaaccgacacaaaagtgtataaaatctcgcataatagacctatagtcgtt 40883343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 41367705 - 41367666
Alignment:
Q  116 ccgggtgagccgtggcccaccccagcccatgaagggctcc 155  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  41367705 ccgggtgaaccgtggcccaccccaacccatgaagggctcc 41367666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 6961164 - 6961122
Alignment:
Q  44 aaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||    
T  6961164 aaacctaaaaccgacacaaaattgtataaaatcttgcaaaata 6961122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 28754856 - 28754810
Alignment:
Q  119 ggtgagccgtggcccaccccagcccatgaagggctccgccactgccg 165  Q
    |||| ||| |||||||||| |||||||||| ||||||||||||||||    
T  28754856 ggtgggccatggcccaccctagcccatgaaaggctccgccactgccg 28754810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 8727766 - 8727725
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgcc 158  Q
    |||||| | |||||||||||| ||||||||||||||||||||    
T  8727766 cgggtgggtcgtggcccaccctagcccatgaagggctccgcc 8727725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 9013847 - 9013814
Alignment:
Q  130 gcccaccccagcccatgaagggctccgccactgc 163  Q
    ||||||||||||||||||||||||||||| ||||    
T  9013847 gcccaccccagcccatgaagggctccgccgctgc 9013814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 9408421 - 9408458
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  9408421 gtattcggtgtccgtgtccgtatccgtgtttcataggt 9408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 11061156 - 11061189
Alignment:
Q  166 gtatccggtgtccgtgtccgtatccgtgcttcat 199  Q
    ||||||| ||||||||||||||||||||||||||    
T  11061156 gtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 1433428 - 1433396
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||||| |||||||||||||||||||||    
T  1433428 cggtgtccgtgcccgtatccgtgcttcataggt 1433396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 8461734 - 8461698
Alignment:
Q  126 cgtggcccaccccagcccatgaagggctccgccactg 162  Q
    |||| |||||||||||||||||||||||| |||||||    
T  8461734 cgtgacccaccccagcccatgaagggctctgccactg 8461698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 17851407 - 17851375
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    ||||||||||||||| |||||||||||||||||    
T  17851407 tccggtgtccgtgtctgtatccgtgcttcatag 17851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 21141067 - 21141095
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcat 199  Q
    |||||||||||||||||||||||||||||    
T  21141067 cggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19206 - 19048
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  19206 cgggtgggccactacaccactttgcaggaatttggataaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatgatcgtt 19107  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgcca 159  Q
    ||             ||||||| ||||||||||||||||||||||||||||||||||||    
T  19106 gatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcca 19048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19319 - 19224
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | |||   ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19319 cgggtgggccactacaccaattttttggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 19224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2660836 - 2660997
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  2660836 cgggtgggccactacaccactttgcaggaatttggatcatccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagacctataatcgtt 2660935  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             ||||||| | ||||||||| |||||||||||||||||||||||||||    
T  2660936 gattttttaatttttccgggtgggtcgtggcccatcccagcccatgaagggctccgccactg 2660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24130242 - 24130396
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||    
T  24130242 cgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat-----tataatcgtt 24130336  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccac 160  Q
    ||             ||||||| || ||||||||||||||||||||||||||||||||||    
T  24130337 gattttttaatttttccgggtgggcagtggcccaccccagcccatgaagggctccgccac 24130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9079053 - 9079214
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  9079053 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgtt 9079152  T
Q  101 gannnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||             |||| || || |||||||||||||| |||||||||||||||||||||    
T  9079153 gattttttaatttttccggatgggctgtggcccaccccagtccatgaagggctccgccactg 9079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 11450510 - 11450668
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgannnnnn 108  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||          
T  11450510 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataagatctcgcaaaatagatatataatcgttgatattta 11450609  T
Q  109 nnnnnnnccgggtgagccgtggcccac----cccagcccatgaagggctccgccactgc 163  Q
           ||||||| ||||||||||||    ||||||||||||||||||||||||||||    
T  11450610 aatttttccgggtgggccgtggcccaccccacccagcccatgaagggctccgccactgc 11450668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 24635472 - 24635629
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgann 104  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||||||||||||      
T  24635472 tggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaaattagacctataatcgttgatt 24635571  T
Q  105 nnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
               |||| || |||||||||||||||||||||||||||||| ||||||||    
T  24635572 ttttaatttttccggatgggccgtggcccaccccagcccatgaagggcttcgccactg 24635629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15469250 - 15469149
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  15469250 cgggtggaccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgtt 15469151  T
Q  101 ga 102  Q
    ||    
T  15469150 ga 15469149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 12698647 - 12698493
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga-nnnnn 107  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||          
T  12698647 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttgatttttt 12698548  T
Q  108 nnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
            ||||||  |||||||||||||||||||||||||||||||||||||||    
T  12698547 aaatttttccgggtcggccgtggcccaccccagcccatgaagggctccgccactg 12698493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 16461410 - 16461568
Alignment:
Q  4 gtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgan 103  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||     
T  16461410 gtggaccactacacaactttgaaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataggcttataatcgttgat 16461509  T
Q  104 nnnnnnnnnnnnccgggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
                ||||||| |||||| |||||||||| ||||||||| |||||||||||    
T  16461510 tttttaatatttccgggtgggccgtgacccaccccagtccatgaaggactccgccactg 16461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 7021978 - 7021882
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatc 97  Q
    ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7021978 cgggtgggccactacatcactttgcaggaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatc 7021882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8560586 - 8560485
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||  |||| |||||||||||    
T  8560586 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaatttagacctataatcgtt 8560487  T
Q  101 ga 102  Q
    ||    
T  8560486 ga 8560485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 34023549 - 34023641
Alignment:
Q  10 cactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  34023549 cactacaccactttgcagaaatttagatcaaccaaaacataaaaccgacacaaaattatataaaatctcgtaaaatagacctataatcgttga 34023641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26468609 - 26468508
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| |||||| ||||  |||||||||||||||||||| |||||||||||||||||||| ||||||| |||    
T  26468609 cgggtgggccactacaccactttgcaggaatttggatcaagcaaattataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatagtt 26468510  T
Q  101 ga 102  Q
    ||    
T  26468509 ga 26468508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 12996555 - 12996464
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| ||||||| ||||||| ||| |||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12996555 tggaccactacaccactttgcgggaatttggattaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 12996464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 34127646 - 34127557
Alignment:
Q  13 tacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||  |||||| |||||    
T  34127646 tacaccactttgcaggaatttggatcaaccaaatcataaaaccgatacaaaattgtataaaatctcgcaaaatagacttataatagttga 34127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2660723 - 2660818
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  2660723 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 2660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34127771 - 34127676
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  34127771 cgggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatcttgcaaaatagacctataat 34127676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7022091 - 7021996
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||  ||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  7022091 cgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34023427 - 34023522
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||  |||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  34023427 cgggtggttcactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 34023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 13405387 - 13405460
Alignment:
Q  27 ggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| |||||| | |||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  13405387 ggaatttggatcaatcgaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgtt 13405460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 14883161 - 14883261
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacac-aaaattgcataaaatctcgcaaaatagatctataatcgttg 101  Q
    ||||| ||||||||| ||||||| ||||||| |||||||| |||| ||||| |||||| ||||||| |||||||||||| |||||||  |||||||||||    
T  14883161 ggtgggccactacaccactttgcgggaatttggatcaaccgaaacctaaaatcgacaccaaaattgtataaaatctcgcgaaatagacttataatcgttg 14883260  T
Q  102 a 102  Q
    |    
T  14883261 a 14883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11450389 - 11450476
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||| ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||    
T  11450389 cgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaataga 11450476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12698767 - 12698680
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||| |||||||||    
T  12698767 cgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaagcgacataaaattgtataaaatctcacaaaataga 12698680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 23258843 - 23258934
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| | ||||||| ||||| ||||||||||||  ||||||||||  ||||||| |||||||||| ||||||||| |||||||    
T  23258843 tggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 23258957 - 23259048
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||||||| | ||||||| ||||| ||||||||||||  ||||||||||  ||||||| |||||||||| ||||||||| |||||||    
T  23258957 tggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23259048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 26468714 - 26468627
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| |||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  26468714 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 26468627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 8560697 - 8560604
Alignment:
Q  3 ggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||| |||||||||| | ||||| | ||||| |||||||| |||| ||||||||||  ||||||| |||||||||| |||||||||||||||||    
T  8560697 ggtgcaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagatctataat 8560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 23259067 - 23259147
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaa 82  Q
    |||||| ||||||||  | ||||||| |||||  |||||||||||||||||||||| | ||||||||||||||||||||||    
T  23259067 gggtgggccactacaacattttgcagaaatttgaatcaaccaaaacataaaaccgatagaaaattgcataaaatctcgcaa 23259147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15469362 - 15469268
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | ||||| ||||||  ||| |||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  15469362 cgggtgggccactacaccaatttgcgggaattgggat-aaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 15469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12996444 - 12996343
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||  |||||||| ||||||  |||||||  ||||| | |||| ||||||||| ||||||||| |||||||||||||||||| |||||| ||| ||    
T  12996444 cgggtgggtcactacaccactttgagggaatttgcatcaatcgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatatatctattatcatt 12996345  T
Q  101 ga 102  Q
    ||    
T  12996344 ga 12996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 7536605 - 7536518
Alignment:
Q  13 tacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||| |||||||  |||||||||||| || |||| |||||  |||||||||||| ||||||||   |||||||||||||||||||||    
T  7536605 tacaccactttgcgagaatttagatcagccgaaacctaaaattgacacaaaattgtataaaatcctacaaaatagatctataatcgtt 7536518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24130129 - 24130224
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||| ||||||||| | | ||| ||||||| |||||||| |||| |||||||| || ||||| | |||||| ||||||||||||| |||||||    
T  24130129 cgggtgggccactacaccaatatgcgggaatttggatcaaccgaaacctaaaaccggcataaaatcgtataaaaactcgcaaaatagacctataat 24130224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 24635356 - 24635450
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||| | ||||| | ||||| |||||||| |||| |||||||||   ||| ||| |||||||||| ||||||||| |||||||    
T  24635356 gggtggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgatttaaatttgtataaaatctcacaaaatagacctataat 24635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31968990 - 31969031
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaacc 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  31968990 cgggtggaccactacaccactttgcaggaatttagatcaacc 31969031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 7938092 - 7938058
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  7938092 tccggtgtccgtgtccgtatccgtgcttcataggt 7938058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 10290501 - 10290456
Alignment:
Q  118 gggtgagccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||    
T  10290501 gggtgggccatggcccaccctagcccatgaagggctccgccactgc 10290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 12996319 - 12996282
Alignment:
Q  127 gtggcccaccccagcccatgaagggctccgccactgcc 164  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12996319 gtggcccaccccaacccatgaagggctccgccactgcc 12996282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 18367813 - 18367781
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||||||    
T  18367813 tccggtgtccgtgtccgtatccgtgcttcatag 18367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 5970185 - 5970219
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||||||||||||||| |||||||||||||    
T  5970185 tccggtgtccgtgtccgtatctgtgcttcataggt 5970219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 9107453 - 9107487
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||||||||| |||||||||||||||||||    
T  9107453 tccggtgtccgtgtcagtatccgtgcttcataggt 9107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 26468485 - 26468447
Alignment:
Q  125 ccgtggcccaccccagcccatgaagggctccgccactgc 163  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  26468485 ccgtggcccatcccagcccatgaaaggctccgccactgc 26468447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 1398132 - 1398188
Alignment:
Q  29 aatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 86  Q
    ||||||||||||| ||| | ||||||| ||||||||||| ||||||||||| ||||||    
T  1398132 aatttagatcaactaaatc-taaaaccaacacaaaattggataaaatctcgtaaaata 1398188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 13405477 - 13405518
Alignment:
Q  117 cgggtgagccgtggcccaccccagcccatgaagggctccgcc 158  Q
    |||||| | |||||||||||||| ||||||||||||||||||    
T  13405477 cgggtgggtcgtggcccaccccaacccatgaagggctccgcc 13405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 8777056 - 8777088
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||| ||||||||||||||||||||||||||||    
T  8777056 tccgttgtccgtgtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 10290610 - 10290519
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaacca-aaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| | ||||||| ||||| |||||||   |||| ||| ||||||||||| ||| ||||||||||||||| |||| |||| ||||||    
T  10290610 ccactacaccattttgcagaaatttggatcaacttgaaacctaacaccgacacaaa-ttgtataaaatctcgcaaagtagacctatgatcgtt 10290519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 10294083 - 10294051
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||| ||||||||||||||||||||||||    
T  10294083 tccggtgttcgtgtccgtatccgtgcttcatag 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 15469133 - 15469101
Alignment:
Q  129 ggcccaccccagcccatgaagggctccgccact 161  Q
    ||||| |||||||||||||||||||||||||||    
T  15469133 ggccctccccagcccatgaagggctccgccact 15469101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 16461301 - 16461381
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaacc-gacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||| | ||||| |||||||  ||||||  |||| ||||||| |||| ||||||  ||||||||||||||||||||    
T  16461301 ccactacaccaatttgcgggaatttgaatcaactgaaacctaaaacccgacataaaattatataaaatctcgcaaaataga 16461381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 34225888 - 34225916
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  34225888 gtgtccgtgtccgtatccgtgcttcatag 34225916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 34290158 - 34290194
Alignment:
Q  167 tatccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  34290158 tatccggtgtctgtgtccgtatctgtgcttcataggt 34290194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 331932 - 331831
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  331932 cgggtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 331833  T
Q  101 ga 102  Q
    ||    
T  331832 ga 331831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 332044 - 331950
Alignment:
Q  2 gggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    |||||||||||||||| | |||||  |||||| |||||||| |||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  332044 gggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 331950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1264 - 1163
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||| |||||    
T  1264 cgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgaaaagtagacctatagtcgtt 1165  T
Q  101 ga 102  Q
    ||    
T  1164 ga 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1377 - 1290
Alignment:
Q  1 cgggtggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataga 88  Q
    ||||||||||||||||| | |||||  |||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  1377 cgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 1290  T

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Target: scaffold0131 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 11330 - 11237
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttga 102  Q
    |||||| || |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  11330 ccactataccactttgcacgaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaataaatctataatcgttga 11237  T

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Target: scaffold0131; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 11443 - 11356
Alignment:
Q  9 ccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataat 96  Q
    ||||||||| | ||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  11443 ccactacactaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaattgatctataat 11356  T

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Target: scaffold0131; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 11210 - 11166
Alignment:
Q  118 gggtgagccgtggcccaccccagcccatgaagggctccgccactg 162  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  11210 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 11166  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 303820 - 303915
Alignment:
Q  5 tggaccactacacgactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    ||||||||||||| |||||   | |||||  ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| |||| ||||||||    
T  303820 tggaccactacaccactttatggaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcgtt 303915  T

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Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 9874 - 9840
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  9874 tccggtgtccgtgtccgtatccgtgcttcataggt 9840  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 82890 - 82941
Alignment:
Q  49 taaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgtt 100  Q
    |||||||||||||||| || ||||||||||||| |||||| ||||| |||||    
T  82890 taaaaccgacacaaaagtgtataaaatctcgcataatagacctatagtcgtt 82941  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 8774 - 8740
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcataggt 203  Q
    |||||||||||||||||||||| ||||||||||||    
T  8774 tccggtgtccgtgtccgtatccatgcttcataggt 8740  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 46658 - 46625
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatagg 202  Q
    |||| |||||||||||||||||||||||||||||    
T  46658 tccgatgtccgtgtccgtatccgtgcttcatagg 46625  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 547 - 575
Alignment:
Q  171 cggtgtccgtgtccgtatccgtgcttcat 199  Q
    |||||||||||||||||||||||||||||    
T  547 cggtgtccgtgtccgtatccgtgcttcat 575  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 23399 - 23371
Alignment:
Q  173 gtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||||||||||    
T  23399 gtgtccgtgtccgtatccgtgcttcatag 23371  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 130458 - 130426
Alignment:
Q  169 tccggtgtccgtgtccgtatccgtgcttcatag 201  Q
    |||||||||||||||||||||| ||||||||||    
T  130458 tccggtgtccgtgtccgtatccatgcttcatag 130426  T

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