View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2547_low_8 (Length: 252)
Name: NF2547_low_8
Description: NF2547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2547_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 44990525 - 44990752
Alignment:
| Q |
1 |
gcaacaacaaaactcaaaaacaacctattgcatttaagttttaaattatgaacaaaactatttaagtatatgtttttggaacaatcccagaagtacatta |
100 |
Q |
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| T |
44990525 |
gcaacaacaaaactcaaaaacaacctattgcatttaagttttaaattatgaacaaaaatac--------acgtttttggaacaatcccataagtacatta |
44990616 |
T |
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| Q |
101 |
gaaaatgtccctaaatattgttcttaaactatgtcatttggtccttattacgaaaagaaaacaaaaagcatcaaaaccagttgtgacatttatctaatag |
200 |
Q |
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| T |
44990617 |
gaaaatgtccctaaatattgttcttaaactacgtcatttggtccttattacgaaaagaaaacaaaaagcatcaaaaccagttgtgacatttatctaatag |
44990716 |
T |
|
| Q |
201 |
tctccaattttttcttataaccttatatacaaaatg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
44990717 |
tctccaattttttcttataaccttatatacaaaatg |
44990752 |
T |
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