View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2550_low_1 (Length: 416)

Name: NF2550_low_1
Description: NF2550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2550_low_1
NF2550_low_1
[»] chr7 (39 HSPs)
chr7 (14-325)||(11734033-11734346)
chr7 (104-324)||(36099571-36099791)
chr7 (104-324)||(36858133-36858353)
chr7 (104-324)||(29983235-29983455)
chr7 (104-324)||(44605815-44606035)
chr7 (104-272)||(47423497-47423667)
chr7 (107-324)||(16216892-16217108)
chr7 (108-323)||(10198308-10198522)
chr7 (129-327)||(24096628-24096826)
chr7 (151-322)||(33628189-33628360)
chr7 (106-324)||(16198594-16198811)
chr7 (104-203)||(14801875-14801974)
chr7 (104-203)||(15248867-15248966)
chr7 (108-326)||(20131240-20131458)
chr7 (108-325)||(10992604-10992820)
chr7 (108-324)||(34259162-34259377)
chr7 (137-324)||(46170641-46170828)
chr7 (126-324)||(31813488-31813686)
chr7 (219-324)||(45269448-45269553)
chr7 (120-324)||(34191802-34192006)
chr7 (202-324)||(1582155-1582277)
chr7 (126-322)||(5418899-5419091)
chr7 (234-324)||(14801973-14802063)
chr7 (234-324)||(15248965-15249055)
chr7 (219-324)||(9822519-9822624)
chr7 (219-324)||(10724444-10724549)
chr7 (222-324)||(33610590-33610692)
chr7 (224-324)||(17833666-17833765)
chr7 (224-278)||(25069344-25069398)
chr7 (198-324)||(31958611-31958737)
chr7 (227-324)||(20623149-20623246)
chr7 (219-324)||(29679278-29679383)
chr7 (224-272)||(45498883-45498931)
chr7 (229-324)||(16560919-16561014)
chr7 (229-324)||(16604648-16604743)
chr7 (229-324)||(30801677-30801772)
chr7 (219-282)||(46004173-46004236)
chr7 (229-287)||(8419975-8420033)
chr7 (236-281)||(39238057-39238102)
[»] chr2 (47 HSPs)
chr2 (14-325)||(39061722-39062025)
chr2 (14-324)||(29523676-29523986)
chr2 (104-324)||(17513020-17513240)
chr2 (103-325)||(24128752-24128974)
chr2 (104-325)||(7153436-7153656)
chr2 (104-324)||(39678304-39678524)
chr2 (104-324)||(37314825-37315037)
chr2 (124-324)||(23293088-23293289)
chr2 (104-272)||(31900457-31900625)
chr2 (121-324)||(35305196-35305399)
chr2 (144-272)||(14885343-14885471)
chr2 (129-324)||(16106623-16106818)
chr2 (157-324)||(21800619-21800786)
chr2 (106-327)||(27905619-27905842)
chr2 (200-325)||(3988704-3988829)
chr2 (120-328)||(6065410-6065618)
chr2 (120-324)||(39761758-39761962)
chr2 (222-324)||(10810559-10810661)
chr2 (104-324)||(29781416-29781636)
chr2 (221-324)||(32878714-32878817)
chr2 (219-324)||(19881939-19882044)
chr2 (219-324)||(23250969-23251074)
chr2 (325-397)||(35592934-35593006)
chr2 (221-324)||(16457748-16457851)
chr2 (151-324)||(37484403-37484576)
chr2 (220-324)||(37255984-37256088)
chr2 (199-326)||(12365511-12365638)
chr2 (187-324)||(7501379-7501516)
chr2 (247-324)||(18540658-18540735)
chr2 (219-324)||(22315189-22315294)
chr2 (187-324)||(37032776-37032913)
chr2 (229-324)||(30963007-30963102)
chr2 (186-324)||(20907071-20907209)
chr2 (186-324)||(40404311-40404449)
chr2 (120-272)||(26606583-26606735)
chr2 (189-248)||(13814976-13815035)
chr2 (229-324)||(37254842-37254937)
chr2 (186-264)||(43869910-43869988)
chr2 (192-324)||(41746865-41746997)
chr2 (219-278)||(698592-698651)
chr2 (257-324)||(12340396-12340463)
chr2 (237-324)||(29812338-29812425)
chr2 (219-264)||(5560700-5560745)
chr2 (122-199)||(16106546-16106623)
chr2 (229-285)||(5194013-5194069)
chr2 (224-324)||(24934838-24934938)
chr2 (224-324)||(25683530-25683630)
[»] chr8 (40 HSPs)
chr8 (14-324)||(14910095-14910409)
chr8 (15-324)||(30360455-30360772)
chr8 (41-324)||(36658515-36658790)
chr8 (104-324)||(40485436-40485656)
chr8 (104-324)||(41726241-41726461)
chr8 (104-327)||(19726596-19726819)
chr8 (104-324)||(42063462-42063682)
chr8 (104-326)||(3655855-3656077)
chr8 (104-324)||(13487033-13487252)
chr8 (104-324)||(31008418-31008638)
chr8 (104-272)||(5969886-5970054)
chr8 (108-324)||(39375122-39375329)
chr8 (104-270)||(27679157-27679313)
chr8 (144-327)||(18656555-18656730)
chr8 (144-323)||(44056425-44056604)
chr8 (161-324)||(36833904-36834067)
chr8 (144-324)||(4455278-4455450)
chr8 (172-315)||(28761632-28761775)
chr8 (224-324)||(32493188-32493288)
chr8 (108-252)||(39024465-39024607)
chr8 (107-329)||(12639254-12639466)
chr8 (219-324)||(8014919-8015024)
chr8 (104-324)||(1916344-1916563)
chr8 (219-324)||(20821794-20821899)
chr8 (219-327)||(31893204-31893312)
chr8 (234-325)||(26403637-26403728)
chr8 (200-324)||(29867728-29867852)
chr8 (219-325)||(597233-597338)
chr8 (222-303)||(39533883-39533964)
chr8 (219-286)||(6545721-6545788)
chr8 (186-282)||(45219493-45219589)
chr8 (229-324)||(11031030-11031125)
chr8 (14-51)||(36658824-36658861)
chr8 (120-321)||(38712122-38712323)
chr8 (229-324)||(40337561-40337656)
chr8 (200-325)||(36823421-36823546)
chr8 (222-258)||(11922623-11922659)
chr8 (229-324)||(24279611-24279706)
chr8 (270-324)||(5970044-5970098)
chr8 (203-272)||(38968651-38968720)
[»] chr1 (52 HSPs)
chr1 (14-324)||(46535063-46535369)
chr1 (104-324)||(28234799-28235019)
chr1 (104-324)||(44257770-44257990)
chr1 (104-324)||(42866278-42866498)
chr1 (104-324)||(3355400-3355620)
chr1 (104-302)||(24984051-24984249)
chr1 (104-324)||(12792670-12792882)
chr1 (104-268)||(48303086-48303250)
chr1 (104-326)||(9293640-9293842)
chr1 (104-232)||(1846797-1846925)
chr1 (120-272)||(4224979-4225131)
chr1 (142-274)||(50655496-50655628)
chr1 (122-325)||(32364120-32364323)
chr1 (120-326)||(44410710-44410916)
chr1 (123-324)||(16914392-16914593)
chr1 (219-324)||(33690159-33690264)
chr1 (144-324)||(37034810-37034981)
chr1 (219-325)||(20725982-20726088)
chr1 (144-326)||(5384697-5384871)
chr1 (128-323)||(7156139-7156333)
chr1 (219-330)||(45193197-45193308)
chr1 (127-324)||(3014078-3014274)
chr1 (223-324)||(18032287-18032388)
chr1 (219-324)||(962493-962598)
chr1 (219-324)||(3252226-3252331)
chr1 (224-326)||(49241640-49241742)
chr1 (224-323)||(3794153-3794245)
chr1 (120-324)||(24638702-24638903)
chr1 (224-282)||(46545422-46545480)
chr1 (219-324)||(31986083-31986188)
chr1 (221-325)||(20117844-20117948)
chr1 (221-288)||(27415230-27415297)
chr1 (243-326)||(41983794-41983877)
chr1 (111-193)||(34143554-34143636)
chr1 (224-329)||(19554197-19554302)
chr1 (252-324)||(1846926-1846998)
chr1 (221-324)||(43064703-43064806)
chr1 (224-282)||(11191413-11191471)
chr1 (229-327)||(28281973-28282071)
chr1 (142-324)||(50323330-50323512)
chr1 (223-321)||(50358968-50359066)
chr1 (224-285)||(51727095-51727156)
chr1 (219-255)||(37701536-37701572)
chr1 (107-197)||(8256022-8256111)
chr1 (219-264)||(4331956-4332001)
chr1 (219-255)||(37683945-37683981)
chr1 (219-324)||(45774760-45774861)
chr1 (278-324)||(45484176-45484222)
chr1 (129-322)||(40960120-40960313)
chr1 (229-301)||(10698645-10698717)
chr1 (228-280)||(16914594-16914646)
chr1 (219-255)||(52585217-52585253)
[»] chr3 (43 HSPs)
chr3 (14-326)||(2849050-2849369)
chr3 (104-326)||(30464969-30465191)
chr3 (104-325)||(39850694-39850915)
chr3 (104-327)||(23241745-23241968)
chr3 (104-332)||(33634875-33635103)
chr3 (104-324)||(29025259-29025489)
chr3 (104-272)||(26725596-26725763)
chr3 (104-326)||(37599769-37599978)
chr3 (104-323)||(44832412-44832623)
chr3 (122-324)||(55257998-55258187)
chr3 (104-244)||(10259097-10259237)
chr3 (104-268)||(11335545-11335709)
chr3 (104-223)||(11676143-11676262)
chr3 (151-324)||(33987149-33987322)
chr3 (122-324)||(51537090-51537292)
chr3 (129-325)||(29727736-29727932)
chr3 (104-324)||(41462237-41462457)
chr3 (120-324)||(42217060-42217264)
chr3 (128-324)||(45096288-45096485)
chr3 (120-324)||(15100604-15100808)
chr3 (104-324)||(11574994-11575214)
chr3 (144-272)||(52404273-52404401)
chr3 (108-269)||(45158515-45158675)
chr3 (219-324)||(53351171-53351276)
chr3 (127-324)||(42907769-42907965)
chr3 (104-322)||(5123764-5123964)
chr3 (224-325)||(35054712-35054813)
chr3 (242-323)||(11412513-11412594)
chr3 (133-285)||(50007206-50007358)
chr3 (151-325)||(27002521-27002686)
chr3 (219-287)||(6101918-6101986)
chr3 (252-324)||(11676262-11676333)
chr3 (252-324)||(53724061-53724133)
chr3 (189-324)||(21603564-21603699)
chr3 (219-324)||(11018705-11018809)
chr3 (104-324)||(44201109-44201319)
chr3 (187-324)||(51229476-51229613)
chr3 (219-324)||(45104109-45104214)
chr3 (268-324)||(10259241-10259297)
chr3 (224-324)||(3046444-3046544)
chr3 (222-319)||(31488907-31489004)
chr3 (231-336)||(6516813-6516918)
chr3 (41-81)||(47346150-47346190)
[»] scaffold0070 (1 HSPs)
scaffold0070 (104-325)||(12720-12941)
[»] chr6 (18 HSPs)
chr6 (104-324)||(24068080-24068300)
chr6 (104-324)||(21289551-21289770)
chr6 (104-324)||(30269593-30269803)
chr6 (104-324)||(22351135-22351347)
chr6 (104-322)||(31513257-31513474)
chr6 (108-326)||(8464279-8464495)
chr6 (144-269)||(13630249-13630375)
chr6 (219-324)||(6817290-6817395)
chr6 (120-324)||(23595691-23595895)
chr6 (172-324)||(29419720-29419863)
chr6 (104-215)||(31504631-31504741)
chr6 (222-324)||(30426318-30426420)
chr6 (187-324)||(21528807-21528944)
chr6 (219-287)||(11465358-11465426)
chr6 (219-269)||(735091-735141)
chr6 (229-303)||(13177820-13177894)
chr6 (270-324)||(34779971-34780025)
chr6 (224-324)||(35166080-35166180)
[»] chr5 (32 HSPs)
chr5 (104-324)||(36745750-36745970)
chr5 (104-324)||(40143904-40144124)
chr5 (104-324)||(38040623-38040843)
chr5 (104-326)||(27194655-27194877)
chr5 (104-324)||(3752454-3752674)
chr5 (104-324)||(8760987-8761197)
chr5 (104-324)||(35758035-35758245)
chr5 (104-324)||(14635345-14635575)
chr5 (104-267)||(26166093-26166256)
chr5 (137-326)||(6273126-6273315)
chr5 (119-272)||(29293358-29293511)
chr5 (108-324)||(32383776-32383991)
chr5 (157-324)||(18942249-18942416)
chr5 (108-324)||(6459707-6459922)
chr5 (219-322)||(13956932-13957035)
chr5 (158-325)||(14351875-14352042)
chr5 (157-324)||(35456507-35456674)
chr5 (129-270)||(39051843-39051984)
chr5 (157-325)||(17644142-17644310)
chr5 (219-324)||(29823257-29823362)
chr5 (104-153)||(6514364-6514413)
chr5 (108-200)||(389601-389692)
chr5 (224-326)||(43581685-43581787)
chr5 (224-324)||(23015033-23015133)
chr5 (247-324)||(17421303-17421380)
chr5 (224-324)||(33112209-33112309)
chr5 (263-324)||(389696-389757)
chr5 (251-324)||(814803-814876)
chr5 (227-326)||(33224948-33225047)
chr5 (229-299)||(38892686-38892756)
chr5 (255-324)||(23023853-23023922)
chr5 (219-255)||(23023902-23023938)
[»] chr4 (39 HSPs)
chr4 (104-326)||(23611420-23611642)
chr4 (105-272)||(55497505-55497672)
chr4 (104-324)||(11792384-11792594)
chr4 (104-271)||(7648075-7648242)
chr4 (110-324)||(1936397-1936610)
chr4 (144-324)||(25232594-25232774)
chr4 (108-324)||(12704544-12704759)
chr4 (108-327)||(55675417-55675635)
chr4 (107-325)||(28359560-28359779)
chr4 (157-324)||(4414415-4414582)
chr4 (129-324)||(44352087-44352282)
chr4 (104-324)||(8260928-8261138)
chr4 (104-324)||(8274345-8274555)
chr4 (104-324)||(29695316-29695535)
chr4 (175-324)||(24776120-24776269)
chr4 (127-324)||(54822047-54822244)
chr4 (120-324)||(8132791-8132995)
chr4 (187-324)||(26203643-26203780)
chr4 (219-325)||(6354968-6355074)
chr4 (224-324)||(19916434-19916534)
chr4 (227-324)||(38519287-38519384)
chr4 (224-324)||(24394073-24394173)
chr4 (219-326)||(43245714-43245821)
chr4 (219-324)||(25510487-25510592)
chr4 (219-324)||(32988237-32988342)
chr4 (193-302)||(2039104-2039213)
chr4 (219-324)||(2859419-2859524)
chr4 (224-324)||(7362121-7362220)
chr4 (223-288)||(38465204-38465269)
chr4 (219-285)||(18707485-18707551)
chr4 (186-323)||(293515-293652)
chr4 (227-279)||(34856052-34856104)
chr4 (257-326)||(41848951-41849020)
chr4 (224-324)||(13428782-13428882)
chr4 (190-266)||(28445586-28445662)
chr4 (222-328)||(41866652-41866755)
chr4 (104-135)||(9374878-9374909)
chr4 (121-182)||(7362261-7362322)
chr4 (219-288)||(12820254-12820323)
[»] scaffold0231 (1 HSPs)
scaffold0231 (124-326)||(10935-11138)
[»] scaffold0036 (1 HSPs)
scaffold0036 (104-327)||(51906-52129)
[»] scaffold0242 (1 HSPs)
scaffold0242 (111-325)||(17752-17956)
[»] scaffold0043 (1 HSPs)
scaffold0043 (149-324)||(64345-64520)
[»] scaffold0116 (1 HSPs)
scaffold0116 (219-324)||(7839-7944)
[»] scaffold0712 (1 HSPs)
scaffold0712 (138-324)||(4845-5030)
[»] scaffold0709 (1 HSPs)
scaffold0709 (138-324)||(4865-5050)
[»] scaffold0131 (1 HSPs)
scaffold0131 (224-282)||(7876-7934)


Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 14 - 325
Target Start/End: Original strand, 11734033 - 11734346
Alignment:
Q  14 atattgtataagtaaatgtttcataacatat--atatataagaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagattatttt 111  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  11734033 atattgtataagtaaatgtttcataacatatatatatataagaattaatttgtgtttgatcatataataagtgttgaacccgcgtctcttagattatttt 11734132  T
Q  112 agtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatcc 211  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11734133 agtttttaaaatgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagttatcc 11734232  T
Q  212 gagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgag 311  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| |||||||    
T  11734233 gagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgaccgagccgag 11734332  T
Q  312 ttttaaaactatga 325  Q
    ||||||||||||||    
T  11734333 ttttaaaactatga 11734346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 36099571 - 36099791
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36099571 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 36099670  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||    
T  36099671 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 36099770  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  36099771 gagccgagttttaaaactatg 36099791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 36858353 - 36858133
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36858353 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactgtataaatttaatctaaggaccgagttatctaaccg 36858254  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||    
T  36858253 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtatccccgccgagtcgatgacc 36858154  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  36858153 gagccgagttttaaaactatg 36858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 29983455 - 29983235
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29983455 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 29983356  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||    
T  29983355 agtcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccaccgagtcgatgacc 29983256  T
Q  304 tagccgagttttaaaactatg 324  Q
     | ||||||||||||||||||    
T  29983255 gaaccgagttttaaaactatg 29983235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 44605815 - 44606035
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44605815 attattttagtttctaaagtgaccgagtcgccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatcaaaccg 44605914  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||    
T  44605915 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtggttcaaccattgacccattgacccagtaccccggccgagtcgatgacc 44606014  T
Q  304 tagccgagttttaaaactatg 324  Q
     |||||| |||||||||||||    
T  44606015 gagccgaattttaaaactatg 44606035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 47423667 - 47423497
Alignment:
Q  104 attattttagtttctaaagtgaccg--agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaac 201  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47423667 attattttagtttctaaagtgatcgcgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaac 47423568  T
Q  202 cgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47423567 cgaatcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgaccca 47423497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 107 - 324
Target Start/End: Original strand, 16216892 - 16217108
Alignment:
Q  107 attttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagt 206  Q
    |||||||||| |||| ||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  16216892 attttagtttttaaa-tgaacgagtcacctattaaatccgatttaatccggttaaataactatataaatttaatctcaagactgagttatctaaccgagt 16216990  T
Q  207 catccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctag 306  Q
    ||||||||| | |||| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||  |||||||||||| ||    
T  16216991 catccgagttgatccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccagtgacccaatacccatgctgagtcgatgaccgag 16217090  T
Q  307 ccgagttttaaaactatg 324  Q
    ||||||||||||||||||    
T  16217091 ccgagttttaaaactatg 16217108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 108 - 323
Target Start/End: Complemental strand, 10198522 - 10198308
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| ||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  10198522 ttttagtttttaaa-tgaacgagtcaccgattaaatccgatttaatccagttaaatagctatataaatttaatctcaagatcgagttatctaaccgagtc 10198424  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||| || ||||||||||||| |||    
T  10198423 atccgagttgatccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccagtgatccaatacccctgccgagtcgatgaccgagc 10198324  T
Q  308 cgagttttaaaactat 323  Q
    ||||||||||||||||    
T  10198323 cgagttttaaaactat 10198308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 327
Target Start/End: Original strand, 24096628 - 24096826
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| | || |||||||||||||||||||| |||||| | || | |||||    
T  24096628 agtcaccgattaaatccgatttaatccggttaaatagttatataaatttaatctcaagatcgagttatctaaccgagtcacccgagttgatctggttcag 24096727  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgatt 327  Q
     |||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||||| | |||||||||||||||||||||    
T  24096728 acatgcggttcgaccaatgactcagtggttcgaccattgatccagtgacccagtacccctgccgaatcgatgaccgaaccgagttttaaaactatgatt 24096826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 33628189 - 33628360
Alignment:
Q  151 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgact 250  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||| | |||| || ||||||||||||| |||||||||     
T  33628189 aatccggttaaatagctatataaatttaatctcaagaccgagttatccaaccgagtcatccgagttgatccggtttagtcatgcggttcgaccaatgacc 33628288  T
Q  251 cagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    || |||||| |||||||||||| |||| |||||||| || |||||| ||| || ||||||||||||||||||    
T  33628289 caatggttcaaccattgacccagtgactcagtacccctgccgagtcaatgtccgagccgagttttaaaacta 33628360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 324
Target Start/End: Original strand, 16198594 - 16198811
Alignment:
Q  106 tattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgag 205  Q
    ||||||||||| || | |||||||||||||| |||||||||| |||||  | ||||||||||||  |||||||||||||  ||||| |||||||||||||    
T  16198594 tattttagtttttagattgaccgagtcaccggttcaatccgatttaatatgattaaataactatgcaaatttaatctaaacaccgaattatctaaccgag 16198693  T
Q  206 tcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgaccta 305  Q
    |||||||| | | |||| ||||| ||||||||||||||| |||| ||||||||||| ||| |||||| ||||||| ||||  |  |||||||||| || |    
T  16198694 tcatccgatttgatccgtttcagccatgcggttcaaccagtgacccagtggttcga-catcgacccagtgacccaatacctctaccgagtcgatggccga 16198792  T
Q  306 gccgagttttaaaactatg 324  Q
    |||||||||||||||||||    
T  16198793 gccgagttttaaaactatg 16198811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 14801875 - 14801974
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  14801875 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggataaataactatatacatttaatctaaggaccgagttatctaaccg 14801974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 15248867 - 15248966
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15248867 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggataaataactatatacatttaatctaaggaccgagttatctaaccg 15248966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 326
Target Start/End: Original strand, 20131240 - 20131458
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    |||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | |||||| ||||||||| |||||    
T  20131240 ttttcgtttttaaagtgactgagtcaccgattcaatccgatttaatccggttaaatagctatataaatttaatcttaagaccgaattatctaactgagtc 20131339  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||||| | |||| || |||||||||| || | ||||||| || || ||  |||||||||||| |||| || || || || ||| || ||| || |      
T  20131340 atccgagttgatccggtttagtcatgcggatcgatcaatgacccaatgatttaaccattgacccagtgactcaataaccctgccgaatcaatgtccgaat 20131439  T
Q  308 cgagttttaaaactatgat 326  Q
    |||||||||||||||||||    
T  20131440 cgagttttaaaactatgat 20131458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 108 - 325
Target Start/End: Original strand, 10992604 - 10992820
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| || |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  |||| || || | |||||||     
T  10992604 ttttagtttttaaa-tggccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacaccgggtcatatgaccgagtt 10992702  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||  |   |||||||||||||||| ||||||||| ||||| ||||||||||||||| || |||||||||||||||| || |||||||| | || |||    
T  10992703 atccggtttaatccgattcagtcatgcagttcaaccagtgacttagtggttcgaccattaactcattgacccagtacccctgccgagtcgacggccgagc 10992802  T
Q  308 cgagttttaaaactatga 325  Q
    ||||||||||||||||||    
T  10992803 cgagttttaaaactatga 10992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 324
Target Start/End: Original strand, 34259162 - 34259377
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| || |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  || | || || | |||||||     
T  34259162 ttttagtttttaaa-tggccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacactgggtcatatgaccgagtt 34259260  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||| |   | |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| | ||||| || |||||||| |||| |||    
T  34259261 atccgatttaattcgattcagtcatgcggttcaaccagtgactcagtggttcgaccattaactcattgacctaatacccatgccgagtcgacgaccgagc 34259360  T
Q  308 cgagttttaaaactatg 324  Q
    |||||||||||||||||    
T  34259361 cgagttttaaaactatg 34259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 324
Target Start/End: Complemental strand, 46170828 - 46170641
Alignment:
Q  137 attcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcgg 236  Q
    |||||||||||  ||||| |||| ||||  |||| ||||||||||| | | |||||| |||||||||||| || ||  | | |||| |||| ||||||||    
T  46170828 attcaatccgatctaatctggttcaatacatataaaaatttaatcttaaggccgagtcatctaaccgagttattcggtttgatccggttcattcatgcgg 46170729  T
Q  237 ttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||| |||| ||||||||||||||||||||| ||||| |||||||||  || || ||||||||||||| |||||| |||||||||||||    
T  46170728 ttcgaccattgactcagtggttcgaccattaacccaatgacccagtgtccctgccgagtcgatgaccgagccgaattttaaaactatg 46170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 126 - 324
Target Start/End: Complemental strand, 31813686 - 31813488
Alignment:
Q  126 ccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgatt 225  Q
    ||||||||||  |||||||| | |||||  ||||||||| ||||| |||||||| || | |||||  | |||||||||||| || ||  |   | |||||    
T  31813686 ccgagtcaccagttcaatccaatttaatatggttaaatacctataaaaatttaaccttaagaccggatcatctaaccgagttattcggtttaattcgatt 31813587  T
Q  226 cagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    || ||||||  |||||||| ||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||| || |||||||||||||||||    
T  31813586 caatcatgcaattcaaccactgactcagtggttcgaccattaacccattgaaccagtacccctgccgagtcgatgaccgagtcgagttttaaaactatg 31813488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 45269448 - 45269553
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||   | ||||||||||||| ||||||||||||||    
T  45269448 tccgattcagttatgcggttcgaccaatgactcactggttcgaccattgacccagtgacccagtacctccgccgagtcgatgaccgagccgagttttaaa 45269547  T
Q  319 actatg 324  Q
    ||||||    
T  45269548 actatg 45269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 120 - 324
Target Start/End: Original strand, 34191802 - 34192006
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| || |||||||||| ||||||  ||||||||  |||| ||| ||||||| |  |||| || ||||| |||||| ||  |  |   |    
T  34191802 aagtggccgagtcatcggttcaatccgatttaatctagttaaatacttataaaaaattaatcttaaaaccgggtcatctagccgagttatttggtttaat 34191901  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||| ||  |||||||| ||| |||||||||||||||    
T  34191902 ccgatttagtcatgcggttcaaccaatgactcagtggttcgaccatcaacccagtgatccagtacccctgcagagtcgatcaccgagccgagttttaaaa 34192001  T
Q  320 ctatg 324  Q
    |||||    
T  34192002 ctatg 34192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 324
Target Start/End: Complemental strand, 1582277 - 1582155
Alignment:
Q  202 cgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatga 301  Q
    |||||||||||| |   ||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||| | | ||  ||||||||||    
T  1582277 cgagtcatccgatttaatccgattcagtcatgcggttcaatcaatgactcaacggttcgaccattgactcattgacccagtgcacctgctgagtcgatga 1582178  T
Q  302 cctagccgagttttaaaactatg 324  Q
    || ||||||||||||||||||||    
T  1582177 ccgagccgagttttaaaactatg 1582155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 126 - 322
Target Start/End: Complemental strand, 5419091 - 5418899
Alignment:
Q  126 ccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgatt 225  Q
    |||||||| || |||||||| |  ||||| ||||||||| ||||| ||||||||||| | ||| | || ||  |||||||| || ||  |   |||||||    
T  5419091 ccgagtcatcggttcaatccaatctaatctggttaaatacctataaaaatttaatcttaagacagggtcatacaaccgagttattcggtttaatccgatt 5418992  T
Q  226 cagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    |||||    |||||||||| ||||||||||||||||||||| ||||||| ||||||||||  || ||||||||||||| ||||||||||||||||||    
T  5418991 cagtc----ggttcaaccagtgactcagtggttcgaccattaacccattaacccagtacctctgccgagtcgatgaccgagccgagttttaaaacta 5418899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 14801973 - 14802063
Alignment:
Q  234 cggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||| |||||||||||| ||||||||||||||||||||||||| |||||||  | ||||||||||||| ||||||||||||||||||||    
T  14801973 cggttcgaccaatgactcaatggttcgaccattgacccattgacctagtacccccgccgagtcgatgaccgagccgagttttaaaactatg 14802063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 15248965 - 15249055
Alignment:
Q  234 cggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||| |||||||||||| ||||||||||||||||||||||||| |||||||  | ||||||||||||| ||||||||||||||||||||    
T  15248965 cggttcgaccaatgactcaatggttcgaccattgacccattgacctagtacccccgccgagtcgatgaccgagccgagttttaaaactatg 15249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 9822624 - 9822519
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||| |||||||||||| |||||||||||||||| || ||||||| |||||  | ||| ||||||| | ||||||||||||||    
T  9822624 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgactcagtgacccaatacccccgccgaatcgatgatcgagccgagttttaaa 9822525  T
Q  319 actatg 324  Q
    ||||||    
T  9822524 actatg 9822519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 10724549 - 10724444
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||| |||||||||||| |||||||||||||||| || ||||||| |||||  | ||| ||||||| | ||||||||||||||    
T  10724549 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgactcagtgacccaatacccccgccgaatcgatgatcgagccgagttttaaa 10724450  T
Q  319 actatg 324  Q
    ||||||    
T  10724449 actatg 10724444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 33610692 - 33610590
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || ||||  |||||||||   |||| ||||||  ||| || ||||||||||    
T  33610692 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattaactcagtgacttagtacccttacagagttgatgactgagcagaattttaaaact 33610593  T
Q  322 atg 324  Q
    |||    
T  33610592 atg 33610590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 17833765 - 17833666
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||| |||||||| ||||||||||||||| |||| ||| | ||| ||||||||| | ||||||||||||||   |||| ||||||||||||    
T  17833765 ttcagtcatgcggctcaaccaacgactcagtggttcgatcattaacctaatga-ccagtacccctatcgagtcgatgaccgtaccgaattttaaaactat 17833667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 25069398 - 25069344
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacc 278  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||    
T  25069398 ttcagtcatgcggttcaaccaatgactcagtggttcgaccaatgattcattgacc 25069344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 31958611 - 31958737
Alignment:
Q  198 taaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcg 297  Q
    |||||||||||| ||| |   ||||||||  ||||||||||| |||| ||||||| ||||||||||| ||||||| || ||||| ||| | | |||||||    
T  31958611 taaccgagtcattcgattcaatccgattctatcatgcggttcgaccagtgactcaatggttcgaccaatgacccagtggcccagaaccttagccgagtcg 31958710  T
Q  298 atgacctagccgagttttaaaactatg 324  Q
    || ||| | |||| |||||||||||||    
T  31958711 atcaccgatccgatttttaaaactatg 31958737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 20623246 - 20623149
Alignment:
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| || ||||||    |||||  |||||||||||||   |||  |||||||||||||    
T  20623246 agtcatgcggttcaaccaatgacccagtgattcgaccattgactcagtgacccgacgcccttaccgagtcgatgaccggtccggtttttaaaactatg 20623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 29679278 - 29679383
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||  ||||||||||| ||||| |||||||||||| ||||| ||||||| |||  ||||||| | | |||||| || |||   |||| |||||||    
T  29679278 tccgattctatcatgcggttcgaccaacgactcagtggtttgaccaatgacccagtgattcagtaccttggccgagtcaatcaccggtccgatttttaaa 29679377  T
Q  319 actatg 324  Q
    ||||||    
T  29679378 actatg 29679383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 45498931 - 45498883
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||||||||| |||||| | |||||||||| |||||||||||||||||||    
T  45498931 ttcagtcattcggttcgatcaatgactcaatggttcgaccattgaccca 45498883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 16561014 - 16560919
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||| || |||||| |||| |||| || |||||||||| |||   |||||| ||||||    |||||||||||||||||    
T  16561014 tcatgcggttcaaccagtgacccaatggttcaaccaatgactcagtgacccagtaacctcaccgagtcaatgaccggttcgagttttaaaactatg 16560919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 16604648 - 16604743
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||| || |||||| |||| |||| || |||||||||| |||   |||||| ||||||    |||||||||||||||||    
T  16604648 tcatgcggttcaaccagtgacccaatggttcaaccaatgactcagtgacccagtaacctcaccgagtcaatgaccggttcgagttttaaaactatg 16604743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 30801772 - 30801677
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||| |||   ||||||||||||| |||| ||| ||| ||||||| ||||  |  ||| ||||||| | ||||||||||||||||||||    
T  30801772 tcatgcggttcgacctgcgactcagtggttcaaccaatgatccaatgacccaatacctctcccgaatcgatgatcgagccgagttttaaaactatg 30801677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 46004173 - 46004236
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt 282  Q
    |||| ||||||||||| |||||||||||||  ||||||||  |||| ||||||| |||||||||    
T  46004173 tccggttcagtcatgcagttcaaccaatgatccagtggttgaaccagtgacccagtgacccagt 46004236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 8419975 - 8420033
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccct 287  Q
    ||||||||||| |||| |||| || ||||||||||| ||||||| ||||||| ||||||    
T  8419975 tcatgcggttcgaccagtgacccaatggttcgaccaatgacccagtgacccaataccct 8420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 39238057 - 39238102
Alignment:
Q  236 gttcaaccaatgactcagtggttcgaccattgacccattgacccag 281  Q
    |||||||||||||  ||||||||| |||| ||||||||||||||||    
T  39238057 gttcaaccaatgatccagtggttcaaccagtgacccattgacccag 39238102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 14 - 325
Target Start/End: Original strand, 39061722 - 39062025
Alignment:
Q  14 atattgtataagtaaatgtttcataacatatatatataagaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagattattttag 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39061722 atattgtataagtaaatgtttcataacatatatatataaaaattaatttgtgtttgatcatataataagtgttgaacccgcgtctcttagattattttag 39061821  T
Q  114 tttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39061822 tttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccga 39061921  T
Q  214 gtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagtt 313  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||| |||||  | ||||||||||||| |||||| ||    
T  39061922 gtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccat--------tgacccaatacccccgccgagtcgatgaccgagccgaatt 39062013  T
Q  314 ttaaaactatga 325  Q
    ||||||||||||    
T  39062014 ttaaaactatga 39062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 324
Target Start/End: Original strand, 29523676 - 29523986
Alignment:
Q  14 atattgtataagtaaatgtttcataacatatatatata--------agaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagat 105  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  29523676 atattgtataagtaaatgtttcataacatatatatatatatataaaagaattaatttgtgtttgatcatataataagtgttgaacccgcatctcttagat 29523775  T
Q  106 tattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgag 205  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29523776 tattttagtttctaaagtgaccgagtcaccgattcaatttgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccgag 29523875  T
Q  206 tcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgaccta 305  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||  | ||||||||||||| |    
T  29523876 tcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgagtcgatgaccga 29523967  T
Q  306 gccgagttttaaaactatg 324  Q
    |||||||||||||||||||    
T  29523968 gccgagttttaaaactatg 29523986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 17513240 - 17513020
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17513240 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 17513141  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  17513140 agtcatccgagtggttccgatttagtcatgcagttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 17513041  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  17513040 gagccgagttttaaaactatg 17513020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 24128974 - 24128752
Alignment:
Q  103 gattattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaacc 202  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24128974 gattattttagtttctaaagggaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggacctagttatctaacc 24128875  T
Q  203 gagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgac 302  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  24128874 gagtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgac 24128775  T
Q  303 ctagccgagttttaaaactatga 325  Q
    | |||||||||||||||||||||    
T  24128774 cgagccgagttttaaaactatga 24128752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 7153656 - 7153436
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7153656 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 7153557  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||  |||||||||||||||    
T  7153556 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccatt-aatcattgacccagtacccccgtcgagtcgatgacc 7153458  T
Q  304 tagccgagttttaaaactatga 325  Q
     |||||||||||||||||||||    
T  7153457 gagccgagttttaaaactatga 7153436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 39678524 - 39678304
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39678524 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccagttaaataactatataaatttaatctaaggaccgagttatctaaccg 39678425  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||  || ||||||||||||     
T  39678424 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtgattcgaccattgactcattgacccagtacctctgccgagtcgatgaca 39678325  T
Q  304 tagccgagttttaaaactatg 324  Q
     |  ||| |||||||||||||    
T  39678324 gaatcgaattttaaaactatg 39678304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 37314825 - 37315037
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37314825 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 37314924  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||  | ||| |||||||||    
T  37314925 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgaatcgatgacc 37315016  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  37315017 gagccgagttttaaaactatg 37315037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 124 - 324
Target Start/End: Original strand, 23293088 - 23293289
Alignment:
Q  124 gaccgagtca-ccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 222  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23293088 gaccgagtcatccgatttaatccgagttaatccggttaaataactatgtaaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 23293187  T
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| ||||||||||||||||||    
T  23293188 attcagtcatgcggttcgaccaatgactcagtggttcgaccattcacccattgacccagtaccctcgccgagtcaatgaccgagccgagttttaaaacta 23293287  T
Q  323 tg 324  Q
    ||    
T  23293288 tg 23293289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 31900625 - 31900457
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  31900625 attattttagtttctatagtgatcgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccaagttatctaaccg 31900526  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31900525 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgaccca 31900457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 121 - 324
Target Start/End: Original strand, 35305196 - 35305399
Alignment:
Q  121 agtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttc 220  Q
    ||||| || |||||||||| ||||||| ||||| |||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||    
T  35305196 agtgaacgtgtcaccgattaaatccgatttaattcggttagatagctatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatc 35305295  T
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaac 320  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||    
T  35305296 cggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccagtgacccagtacccctgccgagtcgatgaccgagccgagttttaaaac 35305395  T
Q  321 tatg 324  Q
    ||||    
T  35305396 tatg 35305399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 14885471 - 14885343
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||     
T  14885471 ccgagttaatccggttaaataactatataaatttaatctaaggactgagttatttaaccgagtcatccgagtggttccggttcagtcatgcggttcgact 14885372  T
Q  244 aatgactcagtggttcgaccattgaccca 272  Q
    |||||||||||||||||||||||||||||    
T  14885371 aatgactcagtggttcgaccattgaccca 14885343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 129 - 324
Target Start/End: Original strand, 16106623 - 16106818
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    ||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||||| | || ||||| |||||||||||| ||| |  |   ||||||||||    
T  16106623 agtcaccgagtcaattcgatttaatctagttaaatagctataaaaatttaatcttaagatcgagtcatctaaccgagttatctggtttaatccgattcag 16106722  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||||||    
T  16106723 tcatgcggttcaaccagtgactcagtggttcgaccattaacccagtgacccaatactcttgccgagtcgatgaccgagccgagttttaaaactatg 16106818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 324
Target Start/End: Original strand, 21800619 - 21800786
Alignment:
Q  157 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtgg 256  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||||||||| |||||| |   |||||||||||||||| ||||||||| |||| |||||     
T  21800619 gttaaatacctataaatatttaatcttaagaccgagtcatttaaccgagttatccgatttaatccgattcagtcatgcagttcaaccagtgacccagtga 21800718  T
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||||| |||||| |  ||||||||||||| ||||||||||||||||||||    
T  21800719 ttcgaccattgacccagtgacccggtacccctaccgagtcgatgaccgagccgagttttaaaactatg 21800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 106 - 327
Target Start/End: Complemental strand, 27905842 - 27905619
Alignment:
Q  106 tattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaata-act-atataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||| || | |||||||||||||| |||||||||| ||||   | ||||||| ||| ||  |||||||||||||  |||||||||||||||||    
T  27905842 tattttagtttttagattgaccgagtcaccggttcaatccgatttaacatgattaaatatacttatgaaaatttaatctaaacaccgagttatctaaccg 27905743  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||| | | || ||||||||||| |||||||||| ||||| |||||||||||||||  ||||| ||||||| | ||  |  |||||||||| ||    
T  27905742 agtcatccgatttgatctgattcagtcatacggttcaaccgatgacccagtggttcgaccatctacccagtgacccaatgcctctaccgagtcgatggcc 27905643  T
Q  304 tagccgagttttaaaactatgatt 327  Q
     ||||| |||||||||||||||||    
T  27905642 aagccgtgttttaaaactatgatt 27905619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 3988829 - 3988704
Alignment:
Q  200 accgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgat 299  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||| || || |||||||||||||||| |||||||||| || || |||||| ||    
T  3988829 accgagtcatccgagttgatccggttcagtcatgcggttcaaccaatgacccaatgattcgaccattgacccaatgacccagtatccctgccgagtcaat 3988730  T
Q  300 gacctagccgagttttaaaactatga 325  Q
    |||| |||||||||||||||||||||    
T  3988729 gaccgagccgagttttaaaactatga 3988704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 328
Target Start/End: Original strand, 6065410 - 6065618
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| || |||||||||| |||||| | ||||||| ||||| ||| ||| ||| | | || ||| ||| |||||||| || ||  |   |    
T  6065410 aagtggccgagtcatcggttcaatccgatttaatctgattaaatacctataaaaaattattcttaaggccaagtcatcaaaccgagttattcggtttaat 6065509  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    | |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||| || ||| |||||||||   |||||||||||||    
T  6065510 ctgattcagtcatgcggttcaaccaatgacccagtggttcgaccattaacccagtgactcagtacccctgccgaatcgatgaccggaccgagttttaaaa 6065609  T
Q  320 ctatgattc 328  Q
    |||||||||    
T  6065610 ctatgattc 6065618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 324
Target Start/End: Original strand, 39761758 - 39761962
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||| | | ||||||||||||||||||| |||||| | | |    
T  39761758 aagtgatcgagtcaccgattcaatccgatttaatccggttaaatagctacataaatataatctcaaggccgagttatctaaccgagttatccgaattgat 39761857  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    || |||  || ||||  ||| ||||||||||||||||||||||||||  |||| ||||| | |||   | |||| || |||||| | |||| ||||||||    
T  39761858 ccaattttgtaatgcatttcgaccaatgactcagtggttcgaccattatcccaatgacctaatacgtctatcgaatcaatgaccgaaccgaattttaaaa 39761957  T
Q  320 ctatg 324  Q
    |||||    
T  39761958 ctatg 39761962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 222 - 324
Target Start/End: Original strand, 10810559 - 10810661
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  10810559 gattcagtcatgcggttcaaccgatgacccagtggttcgatcattaacccattgacccagtaccgttgccgagtcgatgatcgagccgagttttaaaact 10810658  T
Q  322 atg 324  Q
    |||    
T  10810659 atg 10810661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 29781636 - 29781416
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |  |||||||||||||||| |||||||||| |||||| | ||||||| ||||| ||||||||| |||  ||||| |||| ||| ||    
T  29781636 attattttagtttttggagtgaccgagtcaccggttcaatccgatttaatctgattaaatacctatacaaatttaatataaacaccgaattatttaatcg 29781537  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||  |   |||||||||| ||||||||||||||| |||| |  || ||||||||| ||| || | | ||| |  |  || |||||||| ||||    
T  29781536 agtcatccggtttaatccgattcagccatgcggttcaaccagtgacccgatgattcgaccatcgactcaattatccaatgtctctgccgagtcgaagacc 29781437  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  29781436 gagccgagttttaaaactatg 29781416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 32878714 - 32878817
Alignment:
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaac 320  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||||  ||||||||||||  | |||||||| |||| ||||||||||||||||    
T  32878714 cgattcagttatgcggttcgaccaatgactcattggttcgaccattgacccagggacccagtacccccgccgagtcgacgaccgagccgagttttaaaac 32878813  T
Q  321 tatg 324  Q
    ||||    
T  32878814 tatg 32878817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 19882044 - 19881939
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||  | |||||| |||||| ||||||||||||||    
T  19882044 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgaccaagtgacccagtacccccgccgagtcaatgaccgagccgagttttaaa 19881945  T
Q  319 actatg 324  Q
    ||||||    
T  19881944 actatg 19881939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 23251074 - 23250969
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||||| ||||||||| |||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||||||||||  ||| ||||||||||    
T  23251074 tccgattcagttatgcggttcgaccaatgactcgctggttcgaccattgatccagtgacccagtacccccgtcgagtcgatgactgagctgagttttaaa 23250975  T
Q  319 actatg 324  Q
    ||||||    
T  23250974 actatg 23250969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 35593006 - 35592934
Alignment:
Q  325 attcaatgtatattttatatatatggtgtcggattcggtgttaacttttgtgtctaaataatctagctctatt 397  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  35593006 attcaatgtatattttatatatacggtgtcggatacggtgttaacttttgtgtctaaataatctagttctatt 35592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 16457748 - 16457851
Alignment:
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaac 320  Q
    ||||||||| ||||| |||||||| ||| |||||||||| |||||| || |||||||||| ||||| || ||| ||||||||| ||||||||||||||||    
T  16457748 cgattcagttatgcgattcaaccagtgattcagtggttccaccattaactcattgacccaatacccatgccgaatcgatgaccgagccgagttttaaaac 16457847  T
Q  321 tatg 324  Q
    ||||    
T  16457848 tatg 16457851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 37484576 - 37484403
Alignment:
Q  151 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgact 250  Q
    ||||||||| |||| | ||| ||||||||| ||  |||||||| ||||||||||||||||||  |   |||  |||  ||||||||||| |||| |||||    
T  37484576 aatccggtttaataccaatacaaatttaatatagagaccgagtcatctaaccgagtcatccggtttaatccagttccatcatgcggttcgaccagtgact 37484477  T
Q  251 cagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    || |||||||| || | ||||| |||||||||| ||||  ||||||||  ||| ||||||||||||||||||||    
T  37484476 caatggttcgatcaataacccaatgacccagtatccttaccgagtcgacaaccgagccgagttttaaaactatg 37484403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 37255984 - 37256088
Alignment:
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||| ||  |  ||||||||||||| | |||  ||||||||    
T  37255984 ccgattcaatcatgcggttcaaccaacgactcaatggttcgaccattgaaccattgatccagtgcctctaccgagtcgatgaccgaaccggtttttaaaa 37256083  T
Q  320 ctatg 324  Q
    |||||    
T  37256084 ctatg 37256088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 12365511 - 12365638
Alignment:
Q  199 aaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcga 298  Q
    ||||||||||||||  |  | ||| ||||||||||||||||||||| |||| |||||||||||||| | | ||| ||||||||||||||   ||| ||||    
T  12365511 aaccgagtcatccggtttatcccggttcagtcatgcggttcaaccagtgacccagtggttcgaccaataaaccagtgacccagtaccctaaccgaatcga 12365610  T
Q  299 tgacctagccgagttttaaaactatgat 326  Q
     ||||   ||||||||||||||||||||    
T  12365611 cgaccggtccgagttttaaaactatgat 12365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 7501516 - 7501379
Alignment:
Q  187 accgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    ||||||| || |||||||||||||||| |   ||||||||||||||||||||| |||| |||  ||||| ||  |||| ||||||  |||||||||||||    
T  7501516 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgatccagtgtttgaaccaatgaccctgtgacccagtaccc 7501417  T
Q  287 ttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |   ||||||||| |||   ||||||||||||||||||    
T  7501416 tgaccgagtcgatcaccggtccgagttttaaaactatg 7501379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 18540735 - 18540658
Alignment:
Q  247 gactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||| ||||||| ||| ||||||||| |  ||||||||||| | ||||||||||||||||||||    
T  18540735 gactcagtggttcgaccagtgacccaatgatccagtaccccttccgagtcgatgatcgagccgagttttaaaactatg 18540658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 22315189 - 22315294
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||| ||||| |||||||||| ||||| |||||||||||||||||| |  ||||| ||||| | || |||||| |||||| || |||||||||||    
T  22315189 tccggttcaatcatgtggttcaaccagtgactgagtggttcgaccattgactcggtgacctagtacacctgccgagtcaatgaccgagacgagttttaaa 22315288  T
Q  319 actatg 324  Q
    ||||||    
T  22315289 actatg 22315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 37032776 - 37032913
Alignment:
Q  187 accgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    |||||||||||| | |||||||||||| |   || ||||||||||||| ||||||||| ||| ||||||||||||||| ||| ||| ||||||  |  ||    
T  37032776 accgagttatcttaacgagtcatccgatttaatctgattcagtcatgcagttcaaccagtgattcagtggttcgaccaatgaaccagtgacccgatgacc 37032875  T
Q  287 ttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||  |||||||||||||   |||  |||||||||||||    
T  37032876 ttaccgagtcgatgaccggtccggtttttaaaactatg 37032913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 30963007 - 30963102
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| ||| || ||||||||||||||||| || || | || |||||||  ||||||||| |||   ||||||||||||||||||    
T  30963007 tcatgcggttcaaccagtgattcggtggttcgaccattgactcagtgtctcaatacccttaccgagtcgattaccggtccgagttttaaaactatg 30963102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 20907209 - 20907071
Alignment:
Q  186 gaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    ||||||||| |  ||||||||||||||| |  ||||  | |||||||||||||| |||||||||||| ||||||||||| | || || ||| || ||| |    
T  20907209 gaccgagttgtacaaccgagtcatccgatttattccagtccagtcatgcggttctaccaatgactcaatggttcgaccagtaactcagtgatccggtagc 20907110  T
Q  286 cttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
     | ||||||||||| |||  ||||  |||||||||||||    
T  20907109 atcgtcgagtcgattaccgtgccggtttttaaaactatg 20907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 40404449 - 40404311
Alignment:
Q  186 gaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    |||||||| || || |||||| |||||| |   |||||||| |||||||||||| |||| |||  |||||||||||||| | | ||| |||| || || |    
T  40404449 gaccgagtgatatatccgagttatccgattcaatccgattctgtcatgcggttcgaccagtgatccagtggttcgaccaataatccaatgactcactaac 40404350  T
Q  286 cttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||  ||||||||||||| | |||| |||||||||||||    
T  40404349 cttaccgagtcgatgaccgatccgatttttaaaactatg 40404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 272
Target Start/End: Complemental strand, 26606735 - 26606583
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| ||||||||||| |  ||||| |||| |||| ||||| ||||||||||| | ||  | || |||||||||||| || ||  |   |    
T  26606735 aagtgtccgagtcatcgattcaatccaatctaatctggttcaatacctataaaaatttaatcttaagattgggtcatctaaccgagttattcggtttaat 26606636  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
      ||||||||||||| ||||||||| | |||||||||||||||| || |||||    
T  26606635 ttgattcagtcatgcagttcaaccattaactcagtggttcgaccgttaaccca 26606583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 13815035 - 13814976
Alignment:
Q  189 cgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatga 248  Q
    |||||||||||| ||||||||| || | | || |||||||||||||||||||||||||||    
T  13815035 cgagttatctaatcgagtcatctgatttgatctgattcagtcatgcggttcaaccaatga 13814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 37254842 - 37254937
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||| || |||||| |||| |||| || |||||||||| |||   |||||| ||||||   ||||||||||||||||||    
T  37254842 tcatgcggttcaaccagtgacccaatggttcaaccaatgactcagtgacccagtaacctcaccgagtcaatgaccggtccgagttttaaaactatg 37254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 43869910 - 43869988
Alignment:
Q  186 gaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgacca 264  Q
    |||||||||||   |||||||||||||  |   |||||||||||||||||||||||||| |||| || |||||||||||    
T  43869910 gaccgagttatacgaccgagtcatccggtttagtccgattcagtcatgcggttcaaccagtgacccaatggttcgacca 43869988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 41746997 - 41746865
Alignment:
Q  192 gttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtc 291  Q
    ||||||| |||||||||||||  | | || ||||||||||||| |||||||||| ||  |   ||||||||||  ||| || ||||||||||||  |  |    
T  41746997 gttatcttaccgagtcatccggtttgatctgattcagtcatgcagttcaaccaaggatccgaaggttcgaccaacgactcagtgacccagtacctatacc 41746898  T
Q  292 gagtcgatgacctagccgagttttaaaactatg 324  Q
     | ||||||||| || |||||||||||||||||    
T  41746897 taatcgatgaccgagtcgagttttaaaactatg 41746865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 698651 - 698592
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacc 278  Q
    ||||||||| |||| ||||||||||| ||| |||||||||| |||| ||||||| |||||    
T  698651 tccgattcaatcatacggttcaaccagtgattcagtggttcaaccaatgacccagtgacc 698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 12340463 - 12340396
Alignment:
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||| |||| ||||||||||||| | ||  |||||| || ||| ||||||||||||||||||||    
T  12340463 ttcgaccaatgactcattgacccagtaacattaccgagtcaatcaccgagccgagttttaaaactatg 12340396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 29812338 - 29812425
Alignment:
Q  237 ttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||| ||||||| ||||||||||| ||| ||| |||||||||   |||| |||||||||||||   |||  |||||||||||||    
T  29812338 ttcaaccagtgactcaatggttcgaccaatgaaccagtgacccagtggtcttgccgagtcgatgaccagtccggtttttaaaactatg 29812425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 5560700 - 5560745
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgacca 264  Q
    ||||||||  ||||||||||| |||||| |||||||||||||||||    
T  5560700 tccgattctttcatgcggttcgaccaataactcagtggttcgacca 5560745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 16106546 - 16106623
Alignment:
Q  122 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatcta 199  Q
    |||| ||||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||||| | || ||||| |||||    
T  16106546 gtgatcgagtcaccgagtcaattcgatttaatctagttaaatagctataaaaatttaatcttaagatcgagtcatcta 16106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 5194013 - 5194069
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    ||||||||||  ||||||||| || ||||||||||| ||||||| | ||||||||||    
T  5194013 tcatgcggtttgaccaatgacccattggttcgaccactgacccagtaacccagtacc 5194069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 24934938 - 24934838
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||| ||||||||||||||||||  ||||||||| |||| | || || || ||||||    ||| ||||||||||| | |  ||||||||||||||||    
T  24934938 ttcagttatgcggttcaaccaatgatccagtggttcaaccaataactcagtggcccagtgatattgccgagtcgatgatcgattcgagttttaaaactat 24934839  T
Q  324 g 324  Q
    |    
T  24934838 g 24934838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 25683630 - 25683530
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||| ||||||||||||||||||  ||||||||| |||| | || || || ||||||    ||| ||||||||||| | |  ||||||||||||||||    
T  25683630 ttcagttatgcggttcaaccaatgatccagtggttcaaccaataactcagtggcccagtgatattgccgagtcgatgatcgattcgagttttaaaactat 25683531  T
Q  324 g 324  Q
    |    
T  25683530 g 25683530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 238; Significance: 1e-131; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 14 - 324
Target Start/End: Complemental strand, 14910409 - 14910095
Alignment:
Q  14 atattgtataagtaaatgtttcataacatatatatata----agaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagattatt 109  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  14910409 atattgtataagtaaatgtttcataacatatatatatatataagaattaatttgtgtttgatcatataataagtgttgaatccgcgtctcttagattatt 14910310  T
Q  110 ttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  14910309 ttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataacaatataaatttaatctaaggatcgagttatctaaccgagtcat 14910210  T
Q  210 ccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccg 309  Q
     ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||| |  | ||||||||||||| |||||    
T  14910209 tcgagtggttccgatttagtcatgcggttcgaccaatgactcagtggttcgatcattgacccattgatccagtactcccgccgagtcgatgaccgagccg 14910110  T
Q  310 agttttaaaactatg 324  Q
    |||||||||||||||    
T  14910109 agttttaaaactatg 14910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 15 - 324
Target Start/End: Complemental strand, 30360772 - 30360455
Alignment:
Q  15 tattgtataagtaaatgtttcataacatatatatata--------agaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagatt 106  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  30360772 tattgtataagtaaatgtttcataacatatatatatatatatataagaattaatttgtgtttgatcatataataagtgttgaacgcgcgtctcttagatt 30360673  T
Q  107 attttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagt 206  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30360672 attttagtttctaaagtgatcaagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccaagt 30360573  T
Q  207 catccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctag 306  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||   | ||| ||||||||| ||    
T  30360572 catccgagtggttccgattcagtcatgcggttcgaacaatgactcagtggttcgaccattgacccattgacccagtacctccgccgaatcgatgaccgag 30360473  T
Q  307 ccgagttttaaaactatg 324  Q
    ||||||||||||||||||    
T  30360472 ccgagttttaaaactatg 30360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 41 - 324
Target Start/End: Complemental strand, 36658790 - 36658515
Alignment:
Q  41 atatatatataagaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagattattttagtttctaaagtgaccgagtcaccgattc 140  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658790 atatatatataagaattaatttgtgtttgatcatataataagtgttgaacccgcgtctcttagattattttagtttctaaagtgaccgagtcaccgattc 36658691  T
Q  141 aatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttca 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36658690 aatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcg 36658591  T
Q  241 accaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||||||||||||        ||||||||||    ||||||||||||| ||||||||||||||||||||    
T  36658590 accaatgactcagtggttcgaccattga--------cccagtacccccaccgagtcgatgaccgagccgagttttaaaactatg 36658515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 40485436 - 40485656
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40485436 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 40485535  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||    
T  40485536 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 40485635  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  40485636 gagccgagttttaaaactatg 40485656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 41726241 - 41726461
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41726241 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 41726340  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||    
T  41726341 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacctccgccgagtcgatgacc 41726440  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  41726441 gagccgagttttaaaactatg 41726461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 104 - 327
Target Start/End: Original strand, 19726596 - 19726819
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19726596 attattttagtttctaaagtgaccgagtcactgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 19726695  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  19726696 agtcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 19726795  T
Q  304 tagccgagttttaaaactatgatt 327  Q
     |||||||||||||||||||||||    
T  19726796 gagccgagttttaaaactatgatt 19726819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 42063682 - 42063462
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42063682 attattttagtttataaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 42063583  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  42063582 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 42063483  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  42063482 gagccgagttttaaaactatg 42063462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 104 - 326
Target Start/End: Complemental strand, 3656077 - 3655855
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3656077 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaagaaccgagttatctaaccg 3655978  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||  | |||||||||||||    
T  3655977 agtcatccgagtggttccgatttagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgatccagtatccccgccgagtcgatgacc 3655878  T
Q  304 tagccgagttttaaaactatgat 326  Q
     |||||| |||||||||||||||    
T  3655877 gagccgaattttaaaactatgat 3655855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 13487033 - 13487252
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13487033 attattttagtttctaaagtgaccgaatcaccgattcaatccgagttaatccggttaaataactatataaatataatctaaggaccgagttatctaaccg 13487132  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||  | ||| |||||||||    
T  13487133 agtcatccgcgtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgatccagtaccc-cgccgattcgatgacc 13487231  T
Q  304 tagccgagttttaaaactatg 324  Q
     |||||| |||||||||||||    
T  13487232 gagccgaattttaaaactatg 13487252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 31008418 - 31008638
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31008418 attattttagtttctaaagtgaccgagtcaccgattcaacacgagttaatccggttaaataactatataaatttaatctaaggactgagttatctaaccg 31008517  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||  | |||||||||||||    
T  31008518 agtcatccgagtggttccgattcaatcatgcggttcgaccaatgactcactggttcgaccattgacccattgactcagtacccccgccgagtcgatgacc 31008617  T
Q  304 tagccgagttttaaaactatg 324  Q
     | |||| |||||||||||||    
T  31008618 gaaccgaattttaaaactatg 31008638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 104 - 272
Target Start/End: Original strand, 5969886 - 5970054
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5969886 attattttagtttctaaagtgaccgaatcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 5969985  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5969986 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcaatggttcgaccattgaccca 5970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 108 - 324
Target Start/End: Complemental strand, 39375329 - 39375122
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  39375329 ttttagtttttaaa-tgaacgagtcaccgattaaatccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaaccgagtc 39375231  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||        |||||||||| |||||||||||||||| ||     
T  39375230 atccgagttgatccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattga--------cccagtacccctgtcgagtcgatgaccaaga 39375139  T
Q  308 cgagttttaaaactatg 324  Q
    |||||||||||||||||    
T  39375138 cgagttttaaaactatg 39375122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 104 - 270
Target Start/End: Original strand, 27679157 - 27679313
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27679157 attattttagtttctaaagtggccgagtcaccga----------gttaatccggttaaataactatataaatttaatctaaggatcgagttatctaaccg 27679246  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacc 270  Q
    |||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||    
T  27679247 agtcatccgagtggttccgattcagtcatgcgattcgaccaataattcagtggttcgaccattgacc 27679313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 144 - 327
Target Start/End: Original strand, 18656555 - 18656730
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| |||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||    
T  18656555 ccgatttaatccggttagatagctatataaatttaatctcacgaccgagttatctaaccgagtcatccgagttgatccggttcagtcatgcggttcgacc 18656654  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgatt 327  Q
    ||||||||||||||||||        ||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  18656655 aatgactcagtggttcga--------ccattgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatgatt 18656730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 144 - 323
Target Start/End: Original strand, 44056425 - 44056604
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||| | |||| ||||||||| |||||| |||    
T  44056425 ccgatttaatctggttaaatagctatataaatttaatctcaagaccgagttatctaactgagtcatccgagttgatccggttcagtcatacggttcgacc 44056524  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||||||||||||||||||| |||  |||||||| || ||||||||||| | ||| |||||||||||||||    
T  44056525 aatgactcagtggttcgaccattgacccagtgattcagtacccctgccgagtcgatgatcgagctgagttttaaaactat 44056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 161 - 324
Target Start/End: Complemental strand, 36834067 - 36833904
Alignment:
Q  161 aataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcg 260  Q
    |||| ||||||||||||||||| | || ||||||||||||| ||||||| ||||| | |||| |||||||||||||||| | |||||| |||||||||||    
T  36834067 aatagctatataaatttaatctcaagatcgagttatctaactgagtcattcgagttgatccggttcagtcatgcggttcgatcaatgattcagtggttcg 36833968  T
Q  261 accattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  36833967 accattgacccaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 36833904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 324
Target Start/End: Original strand, 4455278 - 4455450
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| |||||||||||| ||| |||||| |||||||||| |  ||||||||||||||| ||||||||||||| | |||| |||||||||||||||| |||    
T  4455278 ccgatttaatccggttagatagctatatgaatttaatctcaataccgagttatctaactgagtcatccgagttgatccggttcagtcatgcggttcgacc 4455377  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||        ||| ||||||||||||| || |||||||||| || |||| |||||||||||||||    
T  4455378 aatgactcagtggttcga--------ccagtgacccagtacccctgccgagtcgatggccgagccaagttttaaaactatg 4455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 172 - 315
Target Start/End: Original strand, 28761632 - 28761775
Alignment:
Q  172 aaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccc 271  Q
    ||||||||||| | |||||||| | |||||||||| |||||  |   |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28761632 aaatttaatcttaagaccgagtcacctaaccgagttatccggtttaatccgattcagtcatgcggttcaaccagtgactcagtggttcgaccattgaccc 28761731  T
Q  272 attgacccagtacccttgtcgagtcgatgacctagccgagtttt 315  Q
    | | ||||||||||| || ||||||||||||| |||||| ||||    
T  28761732 aataacccagtacccctgccgagtcgatgaccgagccgaatttt 28761775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 32493188 - 32493288
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||||||||||||||||||||||  |||||||||||||||| || || ||||||| ||||| || ||||||||||||| |||||||||||||||||||    
T  32493188 ttcagtcatgcggttcaaccaatgatccagtggttcgaccattaactcactgacccaatacccatgccgagtcgatgaccgagccgagttttaaaactat 32493287  T
Q  324 g 324  Q
    |    
T  32493288 g 32493288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 39024607 - 39024465
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| ||||| ||| ||| ||| ||| |||||| ||||||||| ||||||||||||||||| | ||||||||||||||||| ||||    
T  39024607 ttttagtttttaaa-tgaacgagtgaccaattaaattcgatttaatc-ggttaaatagctatataaatttaatctcaagaccgagttatctaaccaagtc 39024510  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactca 252  Q
    |||||| | | |||| |||||||||||||||| ||||||||||||    
T  39024509 atccgaattgatccggttcagtcatgcggttcgaccaatgactca 39024465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 12639254 - 12639466
Alignment:
Q  107 attttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagt 206  Q
    |||||||||| |||||||||||||||||||||||||| ||          |||||||| ||||||||||||||||| |  ||||| |||||||| |||||    
T  12639254 attttagtttttaaagtgaccgagtcaccgattcaatacg----------gttaaatacctatataaatttaatctcaaaaccgaattatctaatcgagt 12639343  T
Q  207 catccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctag 306  Q
    ||||| | | | || | || |||||||||||||||||||||||||| |||||| |||||||||| | ||||  |||| || | ||||||| ||   | ||    
T  12639344 catccaaattgatctggttaagtcatgcggttcaaccaatgactcaatggttcaaccattgaccgagtgacttagtatccctctcgagtcaattttcgag 12639443  T
Q  307 ccgagttttaaaactatgattca 329  Q
    |||| ||||||||||||| ||||    
T  12639444 ccgaattttaaaactatggttca 12639466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 8014919 - 8015024
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||| ||||| |||||||  | |||||| |||||| ||||||||||||||    
T  8014919 tccgattcagttatgcggttcgaccaatgactcactggttcgaccattgatccagtgacctagtacccccgccgagtcaatgaccgagccgagttttaaa 8015018  T
Q  319 actatg 324  Q
    ||||||    
T  8015019 actatg 8015024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 1916563 - 1916344
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |  |||||||||||||||| |||||| ||| |||||| | ||||||| ||||| |||||||||||||  | | | |||||| |  |    
T  1916563 attattttagtttttggagtgaccgagtcaccggttcaattcgatttaatctgattaaatatctatacaaatttaatctaaacatcaaattatcttattg 1916464  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||  | | |||| |||| |||||||||| ||||||| ||    |||||||| ||| ||| || |||| |||||||  ||||||||||||||||    
T  1916463 agtcatccggtttgatccggttcaatcatgcggttaaaccaataacctgatggttcgaacatcgactcagtgactcagtacctctgtcgagtcgatgacc 1916364  T
Q  304 tagccgagttttaaaactatg 324  Q
     | ||||| ||||||||||||    
T  1916363 gaaccgag-tttaaaactatg 1916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 20821794 - 20821899
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||||||   ||||||||||||||||||||| ||||| |||| ||||| ||||| |||||||||| || |||| |||||||||    
T  20821794 tccggttcagttatgcggttcaacaggtgactcagtggttcgaccattaacccagtgactcagtatccttgccgagtcgatggccaagccaagttttaaa 20821893  T
Q  319 actatg 324  Q
    ||||||    
T  20821894 actatg 20821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 31893204 - 31893312
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||||||||| ||||  |||||||| ||||   |||| |||||||    
T  31893204 tccggttcagtcatgcggttcaaccagtgactcagtggtttgaccgatgactcattgacccagtaaccttaccgagtcgacgaccagtccgatttttaaa 31893303  T
Q  319 actatgatt 327  Q
    |||||||||    
T  31893304 actatgatt 31893312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 26403637 - 26403728
Alignment:
Q  234 cggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatga 325  Q
    ||||||||||| |||||||||||||| |||||| || || |||| |||||||| | |||||||||||||| ||||||||||||||| |||||    
T  26403637 cggttcaaccagtgactcagtggttcaaccattaactcaatgacacagtacccctatcgagtcgatgaccaagccgagttttaaaattatga 26403728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 29867852 - 29867728
Alignment:
Q  200 accgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgat 299  Q
    |||||||||||||| |   |||| ||||||||||||||||||||| ||||||| |||||| |||| ||||||| |||||||||| |||   || ||| ||    
T  29867852 accgagtcatccgatttaatccggttcagtcatgcggttcaaccagtgactcactggttcaaccaatgacccaatgacccagtaacctcaccgtgtcaat 29867753  T
Q  300 gacctagccgagttttaaaactatg 324  Q
    | ||  |||||||||||||||||||    
T  29867752 gtccgggccgagttttaaaactatg 29867728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 597338 - 597233
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||| || || ||| ||||| ||| |  ||||||||||||  |||||| |||||||    
T  597338 tccggttcagtcacgcggttcaac-aatgactcagtggttcgaccattaactcaatgatccagtgcccctaccgagtcgatgactgagccgaattttaaa 597240  T
Q  319 actatga 325  Q
    |||||||    
T  597239 actatga 597233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 39533964 - 39533883
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||| || |||| || ||||| |||||| |||||||||    
T  39533964 gattcaatcatgcggttcacccaatgacttagtggttcgaccattgactcagtgactcaatacccatgtcgaatcgatgacc 39533883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 6545788 - 6545721
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    |||| |||||| ||||||||| |||||||||||  ||||||||||||||||||| |||||||||||||    
T  6545788 tccggttcagttatgcggttcgaccaatgactcgctggttcgaccattgacccagtgacccagtaccc 6545721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 45219493 - 45219589
Alignment:
Q  186 gaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt 282  Q
    |||||||||||   |||||||||||||  |   |||||||||||||||||||||||||| |||| || ||||||||||| |||| || |||||||||    
T  45219493 gaccgagttatacgaccgagtcatccggtttaatccgattcagtcatgcggttcaaccattgacccaatggttcgaccaatgactcagtgacccagt 45219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 11031125 - 11031030
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||||| |   |||||||||||||||||| |||||||||| ||    ||||| |||||||   ||||||||||||||||||    
T  11031125 tcatgcggttcaaccaatgacccgacggttcgaccattgacccagtgacccagtatccccaccgagttgatgaccggtccgagttttaaaactatg 11031030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 36658861 - 36658824
Alignment:
Q  14 atattgtataagtaaatgtttcataacatatatatata 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36658861 atattgtataagtaaatgtttcataacatatatatata 36658824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 321
Target Start/End: Original strand, 38712122 - 38712323
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| || |||||||||| ||||||  ||||||||  |||| ||||||||||  | |||||| | | || ||||||| ||  |  |   |    
T  38712122 aagtggccgagtcatcggttcaatccgatttaatctagttaaatacatataaaaatttaatcgtaagaccgaatcaacttaccgagttatttggtttaat 38712221  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||||||||||||||| |||||||| | || ||| |||||  ||||| || || ||||||| ||||| | ||||| |||||| | ||| |||||||||||    
T  38712222 ccgattcagtcatgcgattcaaccagtaacccagcggttcccccattaactcactgacccattacccatatcgagccgatgatcgagctgagttttaaaa 38712321  T
Q  320 ct 321  Q
    ||    
T  38712322 ct 38712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 40337656 - 40337561
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| ||| ||| || |||   |||||||||| ||    |||||||||||||||||    
T  40337656 tcatgcggttcgaccaatgacttagtggttcgaccaatgacccagtgatccactatcctcaccgagtcgatggccggttcgagttttaaaactatg 40337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 36823421 - 36823546
Alignment:
Q  200 accgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgat 299  Q
    |||||||||||||| |   |||| |||  |||||||||||||||| |||| || |||||| |||| | || || |||||||||| |||   |||||| ||    
T  36823421 accgagtcatccgatttaatccggttccatcatgcggttcaaccagtgacccaatggttcaaccaataactcagtgacccagtaacctcaccgagtcaat 36823520  T
Q  300 gacctagccgagttttaaaactatga 325  Q
    ||||   |||||||||||||||||||    
T  36823521 gaccggtccgagttttaaaactatga 36823546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 11922659 - 11922623
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggtt 258  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11922659 gattcagtcatgcggttcaaccaatgactccgtggtt 11922623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 24279611 - 24279706
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||| | |||| || |  ||| |||| |||| || |||||||||| ||| ||| |||| |||||| | ||||||||||||||||||    
T  24279611 tcatgcggttcaacaagtgacccaattattcaaccaatgactcagtgacccagtaacctcgtcaagtcaatgaccgatccgagttttaaaactatg 24279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 5970044 - 5970098
Alignment:
Q  270 ccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||  ||||| |||||||||  | |||||||||||||||||    
T  5970044 ccattgacccagtacccccgtcgaatcgatgaccgtgtcgagttttaaaactatg 5970098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 38968651 - 38968720
Alignment:
Q  203 gagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||||||||||| |   ||||||||  |||||||||||||||| |||  |||||||||||||| |||||||    
T  38968651 gagtcatccgattcaatccgattctttcatgcggttcaaccagtgatccagtggttcgaccaatgaccca 38968720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 14 - 324
Target Start/End: Original strand, 46535063 - 46535369
Alignment:
Q  14 atattgtataagtaaatgtttcataacatat----atatataagaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagattatt 109  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  46535063 atattgtataagtaaatgtttcataacatatatatatatataagaattaatttgtgtttgatcatataataagtgttgaacccgcgtctcttagattatt 46535162  T
Q  110 ttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcat 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46535163 ttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggtttaataactatataaatttaatctaaggaccgagttatctaaccgagtcat 46535262  T
Q  210 ccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccg 309  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||  | ||||||||||||| |||||    
T  46535263 ccgaatggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgagtcgatgaccgagccg 46535354  T
Q  310 agttttaaaactatg 324  Q
    |||||||||||||||    
T  46535355 agttttaaaactatg 46535369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 28235019 - 28234799
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28235019 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 28234920  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||    
T  28234919 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 28234820  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  28234819 gagccgagttttaaaactatg 28234799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 44257990 - 44257770
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44257990 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 44257891  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||  | |||||||||||||    
T  44257890 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcggtggttcgaccattgactcattgacccagtacccccgccgagtcgatgacc 44257791  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  44257790 gagccgagttttaaaactatg 44257770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 42866498 - 42866278
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42866498 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 42866399  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  42866398 agtcatccgagtgattccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 42866299  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  42866298 gagccgagttttaaaactatg 42866278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 3355620 - 3355400
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  3355620 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgaattatctaaccg 3355521  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||  | |||||||||||||    
T  3355520 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtgattcgaccattgacccattgacccagtatccccgccgagtcgatgacc 3355421  T
Q  304 tagccgagttttaaaactatg 324  Q
     |||||| |||||||||||||    
T  3355420 gagccgaattttaaaactatg 3355400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 24984051 - 24984249
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24984051 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 24984150  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgac 302  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||  | ||||||||||||    
T  24984151 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactagttcgaccattgacccattgacccagtacccccgccgagtcgatgac 24984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 12792882 - 12792670
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12792882 attattttagtttctaaagtgaccgagtcaccgactcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 12792783  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||        ||||||||||  |||| ||||||||||    
T  12792782 agtcatccgagtggttctgattcagtcatgcggttcgaccaatgactcggtggttcgaccattga--------cccagtacccccgtcgggtcgatgacc 12792691  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  12792690 gagccgagttttaaaactatg 12792670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 48303086 - 48303250
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48303086 attattttagtttctaaagtgaccgagtcaccgattcaattcgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 48303185  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattga 268  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  48303186 agtcatccgagtgattctgattcagtcatgcggttccactaatgactcagtggttcgaccattga 48303250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 104 - 326
Target Start/End: Complemental strand, 9293842 - 9293640
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9293842 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 9293743  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||  ||||||||||||| |    
T  9293742 agtcatccgagtggttccgattcagtcatgcgg--------------------ttcgaccattgacccattgacccagtacccccgtcgagtcgatgatc 9293663  T
Q  304 tagccgagttttaaaactatgat 326  Q
     ||||||||||||||||||||||    
T  9293662 gagccgagttttaaaactatgat 9293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 1846797 - 1846925
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1846797 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 1846896  T
Q  204 agtcatccgagtggttccgattcagtcat 232  Q
    |||||| ||||||||| ||||||||||||    
T  1846897 agtcattcgagtggtttcgattcagtcat 1846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 272
Target Start/End: Original strand, 4224979 - 4225131
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    |||||| ||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||| | |    
T  4224979 aagtgaacgagtcaccgattaaattcgatttaatccggttaaatagctatataaatttaatctcaagaacgagttatctaaccgagtcatccgagttgat 4225078  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4225079 ccggttcagttatgcggttcaaccaatgactcagtggttcgaccattgaccca 4225131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 50655628 - 50655496
Alignment:
Q  142 atccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaa 241  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |    
T  50655628 atccgatttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccaagtcatccgagtggttccgattcagtcatgccgttcga 50655529  T
Q  242 ccaatgactcagtggttcgaccattgacccatt 274  Q
     |||||||| ||||||||||| |||||||||||    
T  50655528 tcaatgacttagtggttcgactattgacccatt 50655496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 32364323 - 32364120
Alignment:
Q  122 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 221  Q
    ||||||||||||||| || ||| ||| |||||  |||||||||  |||| ||||||||||| | |||||||| |||||||||||| |||||  |   |||    
T  32364323 gtgaccgagtcaccggttaaattcgatttaatttggttaaatagttataaaaatttaatcttaagaccgagtcatctaaccgagttatccggtttaatcc 32364224  T
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||||  |||||| ||||| |||||||||||||||| |||||| ||||||||||    
T  32364223 gattcagtcatgcggttcaaccagtgacccagtggttcgaccattaacccagcgacccaatacccctgtcgagtcgatgaccgagccgaattttaaaact 32364124  T
Q  322 atga 325  Q
    ||||    
T  32364123 atga 32364120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 326
Target Start/End: Complemental strand, 44410916 - 44410710
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| ||||||||  | |||||||||| |||||| |||||| || ||||| | ||||||||| |  ||||||| ||||| |||||| || ||  |   |    
T  44410916 aagtggccgagtcattggttcaatccgatttaatcgggttaattacctataaagatttaatcttaaaaccgagtcatctagccgagttattcggtttaat 44410817  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    | |||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||||||||    
T  44410816 ctgatttagtcatgcggttcaaccagtgactcagtggttcgaccattaacccagtgacccagtacccttgccgagtcgatgaccgaaccgagttttaaaa 44410717  T
Q  320 ctatgat 326  Q
    |||||||    
T  44410716 ctatgat 44410710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 123 - 324
Target Start/End: Original strand, 16914392 - 16914593
Alignment:
Q  123 tgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 222  Q
    |||||||||||||| |||||||||| |||||  | ||||||| | ||  ||||||||| |||  ||||||||||||||| ||||||||||| | | ||||    
T  16914392 tgaccgagtcaccggttcaatccgatttaatatgattaaatacccatgcaaatttaatttaaacaccgagttatctaactgagtcatccgatttgatccg 16914491  T
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    |||||||||||||||||||  | |||| ||||||||||||||| |||||| ||||||| |  |  | |||||||||||  | ||||||||||||||||||    
T  16914492 attcagtcatgcggttcaattagtgacccagtggttcgaccatcgacccagtgacccaatgtctctatcgagtcgatggtcgagccgagttttaaaacta 16914591  T
Q  323 tg 324  Q
    ||    
T  16914592 tg 16914593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 33690264 - 33690159
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||| ||||||||||||||    
T  33690264 tccgattcaatcatgcggttcaaccaacgactcagtggttcgaccattaacccaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaa 33690165  T
Q  319 actatg 324  Q
    ||||||    
T  33690164 actatg 33690159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 324
Target Start/End: Original strand, 37034810 - 37034981
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| ||||| || ||||||| |||||||| |||||||| | |||||||||||||||||||||          | |||| |||||||||||||||| |||    
T  37034810 ccgatttaattcgattaaatagctatataagtttaatctcaagaccgagttatctaaccgagtt---------gatccggttcagtcatgcggttcgacc 37034900  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||| |||||||||||||||||||||| | ||||||||||| || ||||||||||| | ||||||||||||||||||||    
T  37034901 aatgacccagtggttcgaccattgacccagtaacccagtacccatgccgagtcgatgatcgagccgagttttaaaactatg 37034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 20726088 - 20725982
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| || ||||||||||||| || |||||||||||||||| ||||||||||||||    
T  20726088 tccgattcagtcatgcagttcaaccagtgagtcagtggttcgaccattaactcattgacccagtatccatgtcgagtcgatgaccgagccgagttttaaa 20725989  T
Q  319 actatga 325  Q
    |||||||    
T  20725988 actatga 20725982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 144 - 326
Target Start/End: Original strand, 5384697 - 5384871
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||| ||||||||| | |||| |||||||||||||||| |||    
T  5384697 ccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaactgagccatccgagttgatccggttcagtcatgcggttcgacc 5384796  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgat 326  Q
    ||| || || | ||||||        |||||||||||||||| ||  ||| ||||||||| |||||| |||||||||||||||    
T  5384797 aataacccaatagttcga--------ccattgacccagtacctttaccgaatcgatgaccgagccgaattttaaaactatgat 5384871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 323
Target Start/End: Original strand, 7156139 - 7156333
Alignment:
Q  128 gagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattca 227  Q
    |||||||| |||||||| || |||||||| ||||||| ||||||||||||||||| | ||||||||||||| ||||| |||| | ||| | || | ||||    
T  7156139 gagtcaccaattcaatcagatttaatccgcttaaatatctatataaatttaatctcaagaccgagttatcttaccgaatcattcaagttgatctggttca 7156238  T
Q  228 gtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||||||||||||| ||||  || ||||||||||||||| |||| ||||||| |||| |  |||||| |||  | |||||| ||||||||||||    
T  7156239 gtcatgcggttcaaccgatgatccaatggttcgaccattga-ccatcgacccagcacccctcccgagtcaatggacgagccgaattttaaaactat 7156333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 45193197 - 45193308
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||||||| |||||||||||| || ||||| ||||||||||||||| ||||||| |||||||| ||||||| ||||||||||| | ||||||||||||||    
T  45193197 tccgattcggtcatgcggttcgactaatgattcagtggttcgaccaatgacccagtgacccagcacccttgccgagtcgatgatcgagccgagttttaaa 45193296  T
Q  319 actatgattcaa 330  Q
    ||||||||||||    
T  45193297 actatgattcaa 45193308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 3014078 - 3014274
Alignment:
Q  127 cgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattc 226  Q
    |||||||| | |||||||||| |||||   |||||||| ||||| ||||||||||| | ||||| || || ||||||||| || ||  |   |||| |||    
T  3014078 cgagtcacgggttcaatccgatttaatatagttaaatacctataaaaatttaatcttaagaccgggtcatttaaccgagttattcggtttaatccggttc 3014177  T
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||| || ||||||||| | | || |||||||||||||||||    
T  3014178 agtcatgtggttcaaccaatgactcagtggttcgaccattaatccagtgacccagtacccctgccgagtcgat-aacgagacgagttttaaaactatg 3014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 18032388 - 18032287
Alignment:
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| || |||||| ||||||||| || |||||||| |||| ||||||||||||||||||    
T  18032388 attcagtcatgcagttcaaccagtgactcagtggttcgaccattaactcattgatccagtacccatgccgagtcgacgaccgagccgagttttaaaacta 18032289  T
Q  323 tg 324  Q
    ||    
T  18032288 tg 18032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 962493 - 962598
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||| ||  ||||||| ||||||  || ||||||||||||| ||||||||||||||    
T  962493 tccggttcagtcatgtggttcaaccagtgactcagtggttcgaccattaacttattgacctagtacctatgccgagtcgatgaccgagccgagttttaaa 962592  T
Q  319 actatg 324  Q
    ||||||    
T  962593 actatg 962598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 3252331 - 3252226
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||| || || ||||||||||||  |  ||||||||||||| ||||||||||||||    
T  3252331 tccggttcagtcatgcggttcaaccagtgactcagtggttcaaccattaactcagtgacccagtacctctaccgagtcgatgaccgagccgagttttaaa 3252232  T
Q  319 actatg 324  Q
    ||||||    
T  3252231 actatg 3252226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 224 - 326
Target Start/End: Complemental strand, 49241742 - 49241640
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||| |||||||||||||||| ||||| |||||||||||||| ||||| ||| |||||| || |||||| ||||||||| |||||| ||||||||||||    
T  49241742 ttcagccatgcggttcaaccaacgactcggtggttcgaccattaacccaatgatccagtatccctgtcgaatcgatgaccgagccgaattttaaaactat 49241643  T
Q  324 gat 326  Q
    |||    
T  49241642 gat 49241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 323
Target Start/End: Complemental strand, 3794245 - 3794153
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||       ||||||||||||  |||||||||||||||||||    
T  3794245 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattaacccaatgacccagta-------cgagtcgatgactgagccgagttttaaaactat 3794153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 324
Target Start/End: Complemental strand, 24638903 - 24638702
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| || |||||||| | ||||||  ||||||||  |||| ||||||||||  | |||||||| | || ||||||| || ||  |   |    
T  24638903 aagtggccgagtcatcggttcaatcctatttaatctagttaaatacatataaaaatttaatcgtaagaccgagtcaacttaccgagttattcggtttaat 24638804  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    ||  ||||||||||||||||||||| |||| ||||   ||||||||| || || ||||||| ||||| || ||||||||||||| ||| |||||||||||    
T  24638803 ccagttcagtcatgcggttcaaccagtgacccagt---tcgaccattaactcactgacccactacccatgccgagtcgatgaccgagctgagttttaaaa 24638707  T
Q  320 ctatg 324  Q
    |||||    
T  24638706 ctatg 24638702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 46545480 - 46545422
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  46545480 ttcagtcatgcggttcaaccaatgactcagtggttcgaccaatgactcattgacccagt 46545422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 31986083 - 31986188
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||||||||||  |||||||||||||||||| ||||||||| |||| ||| ||| |||||||| ||||||  |||||||| ||||   ||||||||||||    
T  31986083 tccgattcagttgtgcggttcaaccaatgacccagtggttcaaccaatgaaccagtgacccagcacccttaccgagtcgacgaccggtccgagttttaaa 31986182  T
Q  319 actatg 324  Q
    ||||||    
T  31986183 actatg 31986188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 20117844 - 20117948
Alignment:
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaac 320  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| || |  ||||| ||||||| ||||   |||||||||    
T  20117844 cgatttagtcatgcggttcaaccaataactcaatggttcgaccattgacccaatgactcagtatccctaccgagttgatgaccgagccagtttttaaaac 20117943  T
Q  321 tatga 325  Q
    |||||    
T  20117944 tatga 20117948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 27415230 - 27415297
Alignment:
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccctt 288  Q
    |||||||||| |||||||||||||||||  ||||||||| |||||||| ||| |||||||||||||||    
T  27415230 cgattcagtcgtgcggttcaaccaatgatccagtggttcaaccattgaaccagtgacccagtaccctt 27415297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 41983794 - 41983877
Alignment:
Q  243 caatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgat 326  Q
    |||||||||| ||||||||||||| || || |||| |||||||| ||  |||| ||||||| ||||||||||||||||||||||    
T  41983794 caatgactcaatggttcgaccattaactcactgactcagtacccatgctgagttgatgaccgagccgagttttaaaactatgat 41983877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 34143636 - 34143554
Alignment:
Q  111 tagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagt 193  Q
    |||||| ||||||||  |||||||| |||||||| || |||||||| ||||||| ||||||||||||||||| | ||||||||    
T  34143636 tagtttttaaagtgattgagtcaccaattcaatcagatttaatccgcttaaatatctatataaatttaatctcaagaccgagt 34143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 19554197 - 19554302
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||| |||||| |||||||| |||||||||||| || |||| || ||| |||||| |||   ||||||||| | | |||||||||||||||||||    
T  19554197 ttcagtcatacggttcgaccaatgattcagtggttcgatcaatgactcagtgatccagtaacctcaccgagtcgatcatcgagccgagttttaaaactat 19554296  T
Q  324 gattca 329  Q
    | ||||    
T  19554297 ggttca 19554302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 1846926 - 1846998
Alignment:
Q  252 agtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||| ||||||| ||||||||||   | ||||||||||| | ||||||||||||||||||||    
T  1846926 agtggttcgaccattaacccattaacccagtacctccgccgagtcgatgatcgagccgagttttaaaactatg 1846998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 43064703 - 43064806
Alignment:
Q  221 cgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaac 320  Q
    ||||||| ||||||||| | |||| | || |||||||||||||||||||||| ||||||| ||| |||  ||||||||| |||    |||||||||||||    
T  43064703 cgattcattcatgcggtacgaccagtaacccagtggttcgaccattgacccaatgacccaatacacttaccgagtcgatcaccggttcgagttttaaaac 43064802  T
Q  321 tatg 324  Q
    ||||    
T  43064803 tatg 43064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 11191413 - 11191471
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt 282  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  11191413 ttcagtcatgtggttcaaccaatgactcagtggttcgaccaatgactcagcgacccagt 11191471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 28282071 - 28281973
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgatt 327  Q
    |||||||||||||||| |||| || |||||| |||| |||| || |||||||||| |||   |||||| ||||||   |||||||||||||||||||||    
T  28282071 tcatgcggttcaaccagtgacccaatggttcaaccaatgactcagtgacccagtaacctcaccgagtcaatgaccggtccgagttttaaaactatgatt 28281973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 324
Target Start/End: Complemental strand, 50323512 - 50323330
Alignment:
Q  142 atccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaa 241  Q
    |||||| | |||||| || |||| | ||| ||||||||| ||  ||| |||| |||||||||||||| |||  |   |||| |||  ||||||||||| |    
T  50323512 atccgattcaatccgatttaataccaatacaaatttaatatagagactgagtcatctaaccgagtcaaccggtttaatccggttctatcatgcggttcga 50323413  T
Q  242 ccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||| ||||  | ||||||||||| | ||||| |||||||||| ||||  ||||||||  ||| | ||||||||||||||||||    
T  50323412 ccagtgacctaatggttcgaccaataacccagtgacccagtatccttaccgagtcgacaaccgaaccgagttttaaaactatg 50323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 50358968 - 50359066
Alignment:
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||| || ||||| |||| |||   ||||||||| | | | |||| ||||||||||    
T  50358968 attcagtcatgcggttcgaccaatgattcagtggttcgaccaatgactcagtgacctagtaacctcaccgagtcgatcatcgaaccgaattttaaaact 50359066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 51727156 - 51727095
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    ||||||||||||||||||||||||||||| |||||||| || |||| || ||| ||||||||    
T  51727156 ttcagtcatgcggttcaaccaatgactcaatggttcgatcaatgactcagtgatccagtacc 51727095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 37701536 - 37701572
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtg 255  Q
    |||||||||||||||||||||||||||||||||||||    
T  37701536 tccgattcagtcatgcggttcaaccaatgactcagtg 37701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 8256111 - 8256022
Alignment:
Q  107 attttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatc 197  Q
    |||||||||| |||| ||| ||||||| || |||||||||| ||||||| ||||| || ||||||||||| |||| |  ||||||||||||    
T  8256111 attttagtttttaaactgatcgagtcagcggttcaatccgatttaatccagttaa-tagctatataaattgaatcaatagaccgagttatc 8256022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 4331956 - 4332001
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgacca 264  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  4331956 tccgatttagtcatgcggttcaaccaatgacccagtggttcaacca 4332001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 37683981 - 37683945
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtg 255  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37683981 tccgatttagtcatgcggttcaaccaatgactcagtg 37683945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 45774861 - 45774760
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| ||||||||||||| |||| ||||||||| ||    ||| |||| ||||| ||| ||||||| | || ||||||||||| | | ||||||||||||    
T  45774861 tccggttcagtcatgcggctcaatcaatgactcggt----cgatcattaacccaatgatccagtacacctgccgagtcgatgatcgaaccgagttttaaa 45774766  T
Q  319 actatg 324  Q
    ||||||    
T  45774765 actatg 45774760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 45484222 - 45484176
Alignment:
Q  278 ccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||| || ||||||||||||| |||| |||||||||||||||    
T  45484222 ccagtacccctgccgagtcgatgaccaagccaagttttaaaactatg 45484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 40960120 - 40960313
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    ||||| || ||||||||||  ||| | ||||||||| ||||| ||| ||||||| | || || || || ||||||||| || | | |   || |||||||    
T  40960120 agtcatcggttcaatccgatctaacctggttaaatacctataaaaaattaatcttaagatcgggtcatgtaaccgagttattcaatttaatctgattcag 40960219  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    |||  || |||||||| ||| |||||| |||||||||| || | |||||||| || || ||  |||||||||||| | | || |||||||||||    
T  40960220 tcaaacgattcaaccagtgattcagtgattcgaccattaactcgttgacccaatatccctgctgagtcgatgaccgaactgaattttaaaacta 40960313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 10698645 - 10698717
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatga 301  Q
    ||||||||||| ||||||||  || |||||||||||||||  || ||||| | |||||||  |||||||||||    
T  10698645 tcatgcggttcgaccaatgatccaatggttcgaccattgattcaatgacctaatacccttaccgagtcgatga 10698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 16914594 - 16914646
Alignment:
Q  228 gtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgaccca 280  Q
    ||||||||||||||  | ||||||||||||| |||||| |||||| |||||||    
T  16914594 gtcatgcggttcaattagtgactcagtggtttgaccatcgacccaatgaccca 16914646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 52585253 - 52585217
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtg 255  Q
    |||| |||||||||||||||| |||||||||||||||    
T  52585253 tccggttcagtcatgcggttcgaccaatgactcagtg 52585217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 2849050 - 2849369
Alignment:
Q  14 atattgtataagtaaatgtttcataacatatatatata--------agaattaatttgtttttgatcatataataagtgttgaactcgcgtctcttagat 105  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  2849050 atattgtataagtaaatgtttcataacatatatatatatatataaaagaattaatttgtgtttgatcatataataagtgttgaacccgcatctcttagat 2849149  T
Q  106 tattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgag 205  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2849150 tattttagtttctaaagtgaccgagtcaccgattcaataagagttaatccaattaaataactatataaatttaatctaaggaccgagttatctaaccgag 2849249  T
Q  206 tcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgaccta 305  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||| ||    ||||||||||||| |    
T  2849250 tcatccgagtggttccgattcagtcatgcggttcgaccaatgactcaatgattcgaccattaacccattgacccagtatcc-caccgagtcgatgaccga 2849348  T
Q  306 gccgagttttaaaactatgat 326  Q
    |||||||||||||||||||||    
T  2849349 gccgagttttaaaactatgat 2849369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 104 - 326
Target Start/End: Original strand, 30464969 - 30465191
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30464969 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 30465068  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  30465069 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 30465168  T
Q  304 tagccgagttttaaaactatgat 326  Q
     |||||| |||||||||||||||    
T  30465169 gagccgaattttaaaactatgat 30465191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 39850915 - 39850694
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39850915 attattttagtttctaaagtgactgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 39850816  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||  | |||||||||||||    
T  39850815 agtcatccgagtggttccgattcaatcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacctagtacccccgccgagtcgatgacc 39850716  T
Q  304 tagccgagttttaaaactatga 325  Q
     |||||||||||||||||||||    
T  39850715 gagccgagttttaaaactatga 39850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 104 - 327
Target Start/End: Original strand, 23241745 - 23241968
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23241745 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttattctaaggaccgagttatctaaccg 23241844  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||  | |||||||||||||    
T  23241845 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccaatacccccgccgagtcgatgacc 23241944  T
Q  304 tagccgagttttaaaactatgatt 327  Q
     |||||| ||||||||||||||||    
T  23241945 gagccgaattttaaaactatgatt 23241968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 104 - 332
Target Start/End: Complemental strand, 33635103 - 33634875
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33635103 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatctggttaaataactatataaatttaatctaaggaccgagttatctaaccg 33635004  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||| |    
T  33635003 agtcatccgagttgttccgattctatcatgcggttcgaccaatgactcagtggttcgaccattgacccattaacccagtacccccgccgagtcgatgatc 33634904  T
Q  304 tagccgagttttaaaactatgattcaatg 332  Q
     | |||||||||||||||||| |||||||    
T  33634903 gaaccgagttttaaaactatgcttcaatg 33634875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 29025489 - 29025259
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccg----------gttaaataactatataaatttaatctaaggaccgagt 193  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||    
T  29025489 attattttagtttataaagtgaccgagtcaccgattcaatccgagttaatccgagttaatccggttatataactatataaatttaatctaaggaccgagt 29025390  T
Q  194 tatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcga 293  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||  | |||    
T  29025389 tatctaaccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcaaccattgacccattgacccagtacccccgccga 29025290  T
Q  294 gtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||| ||| ||||||||||||||||    
T  29025289 gtcgatgaccgagctgagttttaaaactatg 29025259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 26725763 - 26725596
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26725763 attattttagtttctaaagtgac-gaatcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 26725665  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  26725664 agtcatccgagtggttctgattcagtcatgcggttcgaccaataactcagtggttcgaccattgaccca 26725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 104 - 326
Target Start/End: Original strand, 37599769 - 37599978
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||              
T  37599769 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggactgagt---------- 37599858  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
       ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  | | |||||||||||    
T  37599859 ---catccgagtggttacgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgacccagtacccccgccaagtcgatgacc 37599955  T
Q  304 tagccgagttttaaaactatgat 326  Q
     ||||||||||||||||||||||    
T  37599956 gagccgagttttaaaactatgat 37599978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 104 - 323
Target Start/End: Complemental strand, 44832623 - 44832412
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832623 attattttagtttttaaagtggccgactcaccaatttaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 44832524  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||        |||||||| |  |||||||||||||||    
T  44832523 agttatccgagtggttccggttcagtcatgcggttcgaccaatgactcggtggttcgaccattga--------cccagtactcccgtcgagtcgatgacc 44832432  T
Q  304 tagccgagttttaaaactat 323  Q
     |||||| ||||||||||||    
T  44832431 gagccgaattttaaaactat 44832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 122 - 324
Target Start/End: Original strand, 55257998 - 55258187
Alignment:
Q  122 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||    
T  55257998 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccg-------------agtcatccgagtggttcc 55258084  T
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||    
T  55258085 gattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccaccgagtcgatgaccgagccgagttttaaaact 55258184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 10259097 - 10259237
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10259097 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgaattatctaaccg 10259196  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaacca 244  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  10259197 agtcatccgagtggttccgattcagtcatgcggttcgacca 10259237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 11335545 - 11335709
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11335545 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataagaatataaatttaatctaaggaccgagttatctaaccg 11335644  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattga 268  Q
    | ||||||||||| ||| ||||||||||||||||||   ||||||||||||||||||||| ||||    
T  11335645 aatcatccgagtgattctgattcagtcatgcggttcgttcaatgactcagtggttcgaccgttga 11335709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 11676143 - 11676262
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  11676143 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatttaaggaccgagttatctaaacg 11676242  T
Q  204 agtcatccgagtggttccga 223  Q
    ||||||||||||||||||||    
T  11676243 agtcatccgagtggttccga 11676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 151 - 324
Target Start/End: Original strand, 33987149 - 33987322
Alignment:
Q  151 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgact 250  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  33987149 aatccgattaaataactatataaatttaatctaagaaccgagttatctaaccgagtcattcgagtggtttcgattcagtcatgcggttcgaccaatgact 33987248  T
Q  251 cagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||| ||| ||||||||| |||||| |||||| ||    |||||| |||||| || |||||||||||||||||    
T  33987249 cagtgattcaaccattgactcattgatccagtaaccccaccgagtcaatgaccaagtcgagttttaaaactatg 33987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 122 - 324
Target Start/End: Original strand, 51537090 - 51537292
Alignment:
Q  122 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 221  Q
    ||||||||||||||| |||||| ||| |||||| |||||||||  |||| ||||||||||| | |||||||| |||||||||||| |||||  |   |||    
T  51537090 gtgaccgagtcaccggttcaattcgatttaatctggttaaatagttataaaaatttaatcttaagaccgagtcatctaaccgagttatccggtttaatcc 51537189  T
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||| ||||| ||||||| ||||| || ||||||||||||| |||||||||||||||||    
T  51537190 gattcagacatgcggttcaaccagtgacccagtggttcgaccattaacccagtgacccaatacccctgccgagtcgatgaccgagccgagttttaaaact 51537289  T
Q  322 atg 324  Q
    |||    
T  51537290 atg 51537292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 129 - 325
Target Start/End: Complemental strand, 29727932 - 29727736
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    |||||||| |||||| ||| ||||||  |||||||| ||||| ||||||||||| | |||||||| ||||||| |||| |||||  |   ||||||||||    
T  29727932 agtcaccggttcaattcgatttaatctagttaaatagctataaaaatttaatcttaagaccgagtcatctaactgagttatccggtttaatccgattcag 29727833  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatga 325  Q
    |||||||||||||| | |||||||||||||| |||||| ||||| ||||||| ||||| || ||| ||||||||| |||||||||||||||||||||    
T  29727832 tcatgcggttcaactagtgactcagtggttcaaccattaacccaatgacccaatacccctgccgaatcgatgaccgagccgagttttaaaactatga 29727736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 41462237 - 41462457
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |  |||||||||||||||| |||||||||| |||||  |  ||||||  |||| ||||||||| |||  |||||||||||| ||||    
T  41462237 attattttagtttttggagtgaccgagtcaccggttcaatccgatttaatttgaataaatacttatacaaatttaatttaaacaccgagttatcttaccg 41462336  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    | |||||||  |   || ||||||||||||||||||||| | |||| |  |||||||||||| ||| || ||||||||||||  ||||||||||||||||    
T  41462337 aatcatccggtttaatcagattcagtcatgcggttcaacaagtgacccgatggttcgaccatcgactcagtgacccagtacctatgtcgagtcgatgacc 41462436  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  41462437 gagccgagttttaaaactatg 41462457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 324
Target Start/End: Original strand, 42217060 - 42217264
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||||||||||||  | |||||||||| |||||| |||||| || ||||| | ||| ||||| |  ||||||| ||||| |||||| || ||  |   |    
T  42217060 aagtgaccgagtcattggttcaatccgatttaatcgggttaattacctataaatattaaatcttaaaaccgagtcatctagccgagttattcggtttaat 42217159  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||| ||  ||||||||||||| |||||||||||||||    
T  42217160 ccgattcagtcatgcggttcaaccagtgactcagtggttcgaccattaactcaatgacccagtacctttaccgagtcgatgaccgagccgagttttaaaa 42217259  T
Q  320 ctatg 324  Q
    |||||    
T  42217260 ctatg 42217264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 324
Target Start/End: Complemental strand, 45096485 - 45096288
Alignment:
Q  128 gagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattca 227  Q
    |||||||| |||||||| || |||| ||| ||||||| ||||||||||||||||| | |||||| |||||| || ||||||||||||| | |||| || |    
T  45096485 gagtcaccaattcaatcagatttaacccgcttaaatatctatataaatttaatctcaagaccgatttatcttactgagtcatccgagttgatccggttaa 45096386  T
Q  228 gtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt-acccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||| ||||||||| ||||  || |||||||||||||||||||| |||||||| |||| |  |||||| ||| || ||||||||||||||||||||    
T  45096385 gtcatgtggttcaaccgatgatccaatggttcgaccattgacccatcgacccagtaacccctcccgagtcaatggccgagccgagttttaaaactatg 45096288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 324
Target Start/End: Complemental strand, 15100808 - 15100604
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||||||||||||  | |||||||||| |||||| |||||| || ||||| | ||||||||| |  ||||||| || || |||||| || ||  |   |    
T  15100808 aagtgaccgagtcattggttcaatccgatttaatcgggttaattacctataaagatttaatcttaaaaccgagtcatttagccgagttattcggtttaat 15100709  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||| || |||| |||||||||||| | |||||||||||||||    
T  15100708 ccgattcagtcatgcggttcaatcagtgactcagtggttcgaccattaacccaatgacccaatatccttatcgagtcgatgatcgagccgagttttaaaa 15100609  T
Q  320 ctatg 324  Q
    |||||    
T  15100608 ctatg 15100604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 11575214 - 11574994
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |   ||||||||||||| | |||||||||| ||||||   ||||||| ||||| |||||||||||||  |||  ||||| | ||||    
T  11575214 attattttagtttttggcgtgaccgagtcactggttcaatccgatttaatctcattaaatacctatacaaatttaatctaaacacctggttattttaccg 11575115  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||  | | ||||||||||||| ||||||||||||||||| |  |||||||||||| ||  || ||||||||||||  || ||||||||||| |    
T  11575114 agtcatccggtttgatccgattcagtcacgcggttcaaccaatgacccgatggttcgaccatcgattcaatgacccagtacctatgccgagtcgatgatc 11575015  T
Q  304 tagccgagttttaaaactatg 324  Q
     || |||||||||||||||||    
T  11575014 gagtcgagttttaaaactatg 11574994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 52404273 - 52404401
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| ||||| || ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | |||| || | ||||||||||| |||    
T  52404273 ccgatttaatacgattaaatagctatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatccggtttaatcatgcggttcgacc 52404372  T
Q  244 aatgactcagtggttcgaccattgaccca 272  Q
    ||||||||||||||| |||||||||||||    
T  52404373 aatgactcagtggtttgaccattgaccca 52404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 108 - 269
Target Start/End: Complemental strand, 45158675 - 45158515
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| | ||||| ||||| ||||||| || ||||| |||||||  |||||||||||||||| | |||||||||||||||||||| |    
T  45158675 ttttagtttttaaa-tgagcaagtcatcgattaaatccgattttatccgattaaatagttatataaatttaatctcaagaccgagttatctaaccgagcc 45158577  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgac 269  Q
    ||| |||| | |||| |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  45158576 atctgagttgatccggttcagtcatgcggttcgaccaatgactcggtggttcaaccattgac 45158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 53351276 - 53351171
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||||| ||| | ||||||||||||| || ||||||||||||| ||||||||||||||    
T  53351276 tccggttcagtcatgcggttcaaccaacgactcagtggttcaaccattaacctaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaa 53351177  T
Q  319 actatg 324  Q
    ||||||    
T  53351176 actatg 53351171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 127 - 324
Target Start/End: Complemental strand, 42907965 - 42907769
Alignment:
Q  127 cgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatc-taaggaccgagttatctaaccgagtcatccgagtggttccgatt 225  Q
    ||||||| || |||||||||| ||||||  ||||||||  || | ||| |||||| ||||  |||||| |||||||||||| || ||  |   |||| ||    
T  42907965 cgagtcatcggttcaatccgatttaatctagttaaatacttaaaaaaagttaatcctaag--ccgagtcatctaaccgagtaatacggtttaatccggtt 42907868  T
Q  226 cagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||| || ||||||||  ||| ||||||||||||||||||||    
T  42907867 cagtcatgcggttcaaccaatgactcagtggttcgaccattaacctaatgacccagtgcccctgccgagtcgacaaccgagccgagttttaaaactatg 42907769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 322
Target Start/End: Complemental strand, 5123964 - 5123764
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |||||||||| |||||| |||||          ||||| |||||||| ||||||||||||||||| | || |||||||||||||||    
T  5123964 attattttagtttttaaagtgaccaagtcactgattc----------aatccagttaaatacctatataaatttaatctcaagagcgagttatctaaccg 5123875  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||| | |||  |||| |||||||||||||||||||||||| ||||||        ||||| |||| |||||||| || |||||| ||| ||    
T  5123874 agtcatccgagttgatccagttcattcatgcggttcaaccaatgactcaatggttc--------acccagtgactcagtacccctgccgagtcaatggcc 5123783  T
Q  304 tagccgagttttaaaacta 322  Q
     | ||||||||||||||||    
T  5123782 gaaccgagttttaaaacta 5123764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 35054712 - 35054813
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||||||||||| |||| || ||||||||||||| || || ||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  35054712 ttcagtcatgcggttcaaccagtgacccaatggttcgaccattaactcactgacccagtacccatgccgagtcgatgaccgagccgagttttaaaactat 35054811  T
Q  324 ga 325  Q
    ||    
T  35054812 ga 35054813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 323
Target Start/End: Original strand, 11412513 - 11412594
Alignment:
Q  242 ccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  11412513 ccaatgactcagtggttcgaccaatgacccagtgacccaatacccttgccgagtcgatgaccgagccgagttttaaaactat 11412594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 285
Target Start/End: Original strand, 50007206 - 50007358
Alignment:
Q  133 accgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcat 232  Q
    |||| |||||||||| |||||| | |||||||  | || ||||||||| |||  |||||||||||| |||||||||||||  | | ||||||||||||||    
T  50007206 accggttcaatccgatttaatctgattaaatacttgtacaaatttaatttaaacaccgagttatcttaccgagtcatccggtttgatccgattcagtcat 50007305  T
Q  233 gcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    |||||||||||| | || |  |||||||||||| ||| || ||||||||||||    
T  50007306 gcggttcaaccagtaacccgatggttcgaccatcgactcagtgacccagtacc 50007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 325
Target Start/End: Complemental strand, 27002686 - 27002521
Alignment:
Q  151 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgact 250  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||          | |||| || |||||| | |||| | ||||||      
T  27002686 aatccggttaaatagctatataaatttaatctcaagaccgagttatccaaccgagtt---------gatccggtttagtcatacagttcgatcaatgatc 27002596  T
Q  251 cagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatga 325  Q
    || | |||| |||||||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||||||||    
T  27002595 caatagttcaaccattgacccagtgactcagtacccttgccgagtcaatgtccgagccgagttttaaaactatga 27002521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 6101918 - 6101986
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccct 287  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||| |||||||||||||||||    
T  6101918 tccgattcagtcatgcggttcgaccagtgactcaatggttcgaccaatgactcattgacccagtaccct 6101986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 11676262 - 11676333
Alignment:
Q  252 agtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||| |||| |||||||||||||||    
T  11676262 agtggttcgaccattgacccattgacccagtaccc-cgccgagtcgatgaccgagccaagttttaaaactatg 11676333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 53724133 - 53724061
Alignment:
Q  252 agtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||| || ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||    
T  53724133 agtggttcgaccattaactcattgacccagtaccgtggtcgaggcgatgaccaagccgagttttaaaactatg 53724061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 21603564 - 21603699
Alignment:
Q  189 cgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccctt 288  Q
    ||||||| || |||||||||||||| |  ||||||||||||||| | ||||||||| |||| || |||||| |||| ||||| | |||||||||  ||||    
T  21603564 cgagttaactgaccgagtcatccgattctttccgattcagtcatactgttcaaccagtgacccaatggttcaaccaatgacctagtgacccagtgacctt 21603663  T
Q  289 gtcgagtcgatgacctagccgagttttaaaactatg 324  Q
      ||| ||||||||| |||||  |||||||||||||    
T  21603664 accgaatcgatgaccaagccggtttttaaaactatg 21603699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 11018809 - 11018705
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||| |||||||||||| ||||| ||  ||||| ||| |||||||||||||    ||||||||||||| ||||||||||||||    
T  11018809 tccggttcagttatgcggttcgaccaatgactcactggtttgattattgatccagtgacccagtaccc-caccgagtcgatgaccgagccgagttttaaa 11018711  T
Q  319 actatg 324  Q
    ||||||    
T  11018710 actatg 11018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 44201319 - 44201109
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |  ||| | | |||||||  |||||||||| |||||  | ||||||| ||||| |||||||||||||  |||  ||||||||||||    
T  44201319 attattttagtttttggagtaatcaagtcaccagttcaatccgatttaatttgattaaatacctatacaaatttaatctaaacaccaggttatctaaccg 44201220  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||          ||||||| ||||||||||||||| |||||| |  |||||||||||| ||| || ||   |||| ||  |  |||||||||||||    
T  44201219 agtcat----------ccgattctgtcatgcggttcaacaaatgacccgatggttcgaccatcgactcagtgcttcagtgcctctaccgagtcgatgacc 44201130  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  44201129 gagccgagttttaaaactatg 44201109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 51229476 - 51229613
Alignment:
Q  187 accgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    ||||||| || |||||||||||||||| |   ||||||||||||||||||||| |||| |||  ||||| ||  |||| ||||||  |||||||||||||    
T  51229476 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgatccagtgtttgaaccaatgaccctgtgacccagtaccc 51229575  T
Q  287 ttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |   ||||||||| |||   ||||||||||||||||||    
T  51229576 tgaccgagtcgatcaccggtccgagttttaaaactatg 51229613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 45104109 - 45104214
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||  |||||| |||| |||| |||  |||||||||||||||||||||| ||||||||||| |||  ||| ||||| |||   ||||||||||||    
T  45104109 tccgattctttcatgcagttcgaccagtgatccagtggttcgaccattgacccagtgacccagtactcttaccgattcgatcaccggtccgagttttaaa 45104208  T
Q  319 actatg 324  Q
    ||||||    
T  45104209 actatg 45104214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 10259241 - 10259297
Alignment:
Q  268 acccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  10259241 acccattgacccagtacccccgccgagtcgatgaccgagccgagttttaaaactatg 10259297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 3046544 - 3046444
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||||||||||| | |||  ||||||||||||| || || || ||| ||||||||| ||| || ||||||| | |  ||||||||||||||||    
T  3046544 ttcagtcatgcggttcaactagtgatccagtggttcgaccgttaactcactgatccagtacccatgttgaatcgatgagcaaatcgagttttaaaactat 3046445  T
Q  324 g 324  Q
    |    
T  3046444 g 3046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 31488907 - 31489004
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||| |||||||| ||||||||||| | ||| ||||||||||||||| |||  ||| |||||||  | | |||||||||| | |||||| ||||||||    
T  31488907 gatttagtcatgcagttcaaccaataattcaatggttcgaccattgatccagggactcagtacctctattgagtcgatgatcgagccgatttttaaaa 31489004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 336
Target Start/End: Complemental strand, 6516918 - 6516813
Alignment:
Q  231 atgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgattcaa 330  Q
    ||||||||||||||||||| ||||||||  ||||||||| |  ||| |||||   |||  |||||||| || | | |||| |||||||||||||||  ||    
T  6516918 atgcggttcaaccaatgacccagtggttgaaccattgactcggtgaaccagtgatcttaccgagtcgacgatcgatccgatttttaaaactatgataaaa 6516819  T
Q  331 tgtata 336  Q
    ||||||    
T  6516818 tgtata 6516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 47346150 - 47346190
Alignment:
Q  41 atatatatataagaattaatttgtttttgatcatataataa 81  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  47346150 atatacatataagaattaatttatgtttgatcatataataa 47346190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 12941 - 12720
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941 attattttagtttctaaagtgaccgagtcaccgatttaatccaagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 12842  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  12841 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 12742  T
Q  304 tagccgagttttaaaactatga 325  Q
     || ||||||||||||||||||    
T  12741 gagtcgagttttaaaactatga 12720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 24068080 - 24068300
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24068080 attattttagtttctaaagtgaccgagtcaccaattcaatccgagttaatccggttaaataactatataaatttaatctaagcaccgagttatctaaccg 24068179  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||    
T  24068180 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgccgagtcgatgacc 24068279  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  24068280 gagccgagttttaaaactatg 24068300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 21289770 - 21289551
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21289770 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 21289671  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  21289670 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgacccattgacccagtaccc-cgccgagtcgatgacc 21289572  T
Q  304 tagccgagttttaaaactatg 324  Q
     |||||||| | |||||||||    
T  21289571 gagccgagtatgaaaactatg 21289551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 30269803 - 30269593
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269803 attattttagtttctaaagtgaccgagtcaccgattcaatccg----------gttaaataactatataaatttaatctaaggaccgagttatctaaccg 30269714  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||  | |||||||||||||    
T  30269713 agtcatccgagtggttccgattcagtcatgcggttcgaccaacgactcagtggttcgaccattaactcattgacccagtacccccgccgagtcgatgacc 30269614  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  30269613 gagccgagttttaaaactatg 30269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 22351135 - 22351347
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22351135 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttattccggttaaataactatataaatttaatctaaggactgagttatctaaccg 22351234  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||        |||||||||||||| ||  | |||||||||||||    
T  22351235 agtcatccgagtggttctgattaagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtatccccgccgagtcgatgacc 22351326  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  22351327 gagccgagttttaaaactatg 22351347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 104 - 322
Target Start/End: Original strand, 31513257 - 31513474
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||| || | |||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||||| | ||||||| |||| |||||    
T  31513257 attattttcgtgtttaaagtgaccgagtcaccgattcaatccgatttaatc-ggttaaatagctatttaaatttaatctcaagaccgagatatccaaccg 31513355  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||| | |||| || ||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||||||| |  |||||| ||| ||    
T  31513356 agtcatccgagttgatccggtttagtcatgcggttcgaccaatgacccaatggttcaaccattgacccattgactcagtaccccttccgagtcaatgtcc 31513455  T
Q  304 tagccgagttttaaaacta 322  Q
     ||||||||||||||||||    
T  31513456 gagccgagttttaaaacta 31513474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 326
Target Start/End: Complemental strand, 8464495 - 8464279
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| ||||||||| ||| ||| ||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  8464495 ttttagtttttaaa-tgaacgagtcaccaattaaattcgatttaatc-ggttaaatagctatataaatttaatctcaagaccgagttatctaacagagtc 8464398  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||| | | || | |||||||||||||||| |||||||| | ||||||||||||||| || || |||||||||||   || ||||  ||||||| |||    
T  8464397 atccgaattgatctggttcagtcatgcggttcgaccaatgatttagtggttcgaccattaactcagtgacccagtacatctgccgagctgatgaccgagc 8464298  T
Q  308 cgagttttaaaactatgat 326  Q
    ||| |||||||||||||||    
T  8464297 cgaattttaaaactatgat 8464279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 269
Target Start/End: Complemental strand, 13630375 - 13630249
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||  |||||||||| |||| |||    
T  13630375 ccgagttaatccggttaaataattatataaatttaatctaaagaccgagttatctaaccgagtcattcgagtagttccggatcagtcatgcagttcgacc 13630276  T
Q  244 -aatgactcagtggttcgaccattgac 269  Q
     ||||||| ||||||||||||||||||    
T  13630275 aaatgactaagtggttcgaccattgac 13630249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 6817395 - 6817290
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||| ||||||||||||||    
T  6817395 tccgatttagttatgcggttcaaccagtgactcagtggttcgaccattaacccaatgacccagtacccttaccgagtcgatgaccgagccgagttttaaa 6817296  T
Q  319 actatg 324  Q
    ||||||    
T  6817295 actatg 6817290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 324
Target Start/End: Complemental strand, 23595895 - 23595691
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| |||||||| || |||||||||| ||||||  ||||||||  |||| ||| ||||||| |  |||| || ||||| |||||| ||  |  |   |    
T  23595895 aagtggccgagtcatcggttcaatccgatttaatctagttaaatacttataaaaaattaatcttaaaaccgggtcatctagccgagttatttggtttaat 23595796  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    |||||| | |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| || ||||||||| ||| |||||||||||||||    
T  23595795 ccgatttaatcatgcggttcaaccaatgactcagtggttcgaccatcaacccagtgacccagtacccctgccgagtcgatcaccgagccgagttttaaaa 23595696  T
Q  320 ctatg 324  Q
    |||||    
T  23595695 ctatg 23595691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 324
Target Start/End: Original strand, 29419720 - 29419863
Alignment:
Q  172 aaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccc 271  Q
    ||||||||||| | |||||||| | |||||||||| |||||  |  | ||||||||||||||||||||||||| ||||||||||||| ||        ||    
T  29419720 aaatttaatcttaagaccgagtcacctaaccgagttatccgtttaat-ccgattcagtcatgcggttcaaccagtgactcagtggtttga--------cc 29419810  T
Q  272 attgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  29419811 attgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 29419863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 31504631 - 31504741
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||| || | |||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||| | ||||||| |||| |||||    
T  31504631 attattttcgtgtttaaagtgaccgagtcaccgattcaatccgatttaat-cggttaaatagctatttaaatttaatctcaagaccgagatatccaaccg 31504729  T
Q  204 agtcatccgagt 215  Q
    ||| ||||||||    
T  31504730 agtaatccgagt 31504741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 30426420 - 30426318
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||| ||  ||||| ||||||||||   ||||||||||||| |||||| ||||||||||    
T  30426420 gattcaatcatgcggttcaaccagtgacttagtggttcgaccattaacttattgatccagtaccctgtccgagtcgatgaccgagccgaattttaaaact 30426321  T
Q  322 atg 324  Q
    |||    
T  30426320 atg 30426318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 21528807 - 21528944
Alignment:
Q  187 accgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    ||||||| || |||||||||||||||| |   ||||||||||||||||||||| |||| |||| ||||| ||  |||| ||||||  |||||||||||||    
T  21528807 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgacccagtgattgaaccaatgaccctgtgacccagtaccc 21528906  T
Q  287 ttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |   ||||||||| |||   ||||||||||||||||||    
T  21528907 tgaccgagtcgatcaccggtccgagttttaaaactatg 21528944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 11465426 - 11465358
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccct 287  Q
    ||||||||||||||||||||| |||| |||  || ||||||||||| |||| |||||||||||||||||    
T  11465426 tccgattcagtcatgcggttcgaccagtgatccaatggttcgaccaatgactcattgacccagtaccct 11465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 735141 - 735091
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgac 269  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||| ||||    
T  735141 tccgattcagtcatgcagttcaaccagttactcaatggttcgaccaatgac 735091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 13177894 - 13177820
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||| |||| |||| ||||| |||||||| ||||||| ||||||| |||| ||  ||| |||||||||    
T  13177894 tcatgcggttcgaccagtgacacagtgattcgaccaatgacccagtgacccactacctttaccgaatcgatgacc 13177820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 34779971 - 34780025
Alignment:
Q  270 ccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||  | |||||| |||||  ||||||||||||||||||||    
T  34779971 ccattgacccagtacccccgccgagtcaatgacagagccgagttttaaaactatg 34780025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 35166080 - 35166180
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||| ||||||||||||||||||  ||||||||| |||| | || || || ||||||    ||| ||||||||||| | |  ||||||||||||||||    
T  35166080 ttcagttatgcggttcaaccaatgatccagtggttcaaccaataactcagtggcccagtgatattgccgagtcgatgatcgattcgagttttaaaactat 35166179  T
Q  324 g 324  Q
    |    
T  35166180 g 35166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 36745750 - 36745970
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36745750 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 36745849  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  | ||| |||||||||    
T  36745850 agtcatccgagtgattccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtactcccgccgaatcgatgacc 36745949  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  36745950 gagccgagttttaaaactatg 36745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 40144124 - 40143904
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144124 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 40144025  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  |   | |||||||||||||    
T  40144024 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgactcagtttctccgccgagtcgatgacc 40143925  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  40143924 gagccgagttttaaaactatg 40143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 38040843 - 38040623
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |    
T  38040843 attattttagtttataaagtgaccgagtcaccgattcaatccgagttaatctggttaaataactatataaatttaatctaaggatcgagttatctgactg 38040744  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   | ||| |||||||||    
T  38040743 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacctccgccgaatcgatgacc 38040644  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  38040643 gagccgagttttaaaactatg 38040623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 104 - 326
Target Start/End: Original strand, 27194655 - 27194877
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27194655 attattttagtttctaaagtgaccgagtcgccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 27194754  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||| || ||||||||||| |||||||||||  | |||||||||||||    
T  27194755 agtcatctgagtggttccggttcagtcatgtggttcgaccaatgacacagtggttcaactattgacccattaacccagtaccccagccgagtcgatgacc 27194854  T
Q  304 tagccgagttttaaaactatgat 326  Q
     ||||||||||||||||||||||    
T  27194855 gagccgagttttaaaactatgat 27194877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 3752674 - 3752454
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3752674 attattttagtttctaaagtgaccgagtcaccgattaaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 3752575  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||  | |||||||||||||    
T  3752574 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactgcttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 3752475  T
Q  304 tagccgagttttaaaactatg 324  Q
     |||||| | | |||||||||    
T  3752474 gagccgattctgaaaactatg 3752454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 8760987 - 8761197
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8760987 attattttagtttctaaagtgaccgagtcaccga----------gttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 8761076  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||    
T  8761077 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacctattgacccagtacccccgccgagtcgatgacc 8761176  T
Q  304 tagccgagttttaaaactatg 324  Q
     | ||||||||||||||||||    
T  8761177 gatccgagttttaaaactatg 8761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 35758245 - 35758035
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35758245 attattttagtttctaaagtgaccgtgtcactgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 35758146  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||          |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   | |||||||||||||    
T  35758145 ag----------ggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccactgacccagtacctccgccgagtcgatgacc 35758056  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  35758055 gagccgagttttaaaactatg 35758035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 14635575 - 14635345
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccg----------gttaaataactatataaatttaatctaaggaccgagt 193  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||          |||| ||||||||||||||||||||||||||||||||    
T  14635575 attattttagtttctaaagtgaccgagtcaccgattaaatccgagttaatccgagttaatccggttatataactatataaatttaatctaaggaccgagt 14635476  T
Q  194 tatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcga 293  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  14635475 tatctaaccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgacccattgacccagtacccccgccga 14635376  T
Q  294 gtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||| |||||| | | |||||||||    
T  14635375 gtcgatgaccgagccgattctgaaaactatg 14635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 104 - 267
Target Start/End: Original strand, 26166093 - 26166256
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |||||||||||||||| | ||| | | |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  26166093 attattttagtttttaaagtgaccgagtcatcaatttagtacgagttaatccgatttaataactatataaatttaatctaaggaccgagttatctaaccg 26166192  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattg 267  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||    
T  26166193 agtcatccgagtggttctggttcagtcatgcggttcgaccaatgactcagtggttcgactattg 26166256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 326
Target Start/End: Complemental strand, 6273315 - 6273126
Alignment:
Q  137 attcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcgg 236  Q
    ||||||||||| |||||| |||| ||||  |||| ||||||||||| | | |||||| |||||||||||| || ||  | | |||| ||||||||| |||    
T  6273315 attcaatccgatttaatctggttcaatacatataaaaatttaatcttaaggccgagtcatctaaccgagttattcggtttgatccggttcagtcatacgg 6273216  T
Q  237 ttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgat 326  Q
    ||| |||| ||||||||||||||||||||| ||||| | ||||||| ||| || ||||||||||||| ||||||||||||||||||||||    
T  6273215 ttcgaccattgactcagtggttcgaccattaacccaataacccagtgcccctgccgagtcgatgaccgagccgagttttaaaactatgat 6273126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 119 - 272
Target Start/End: Complemental strand, 29293511 - 29293358
Alignment:
Q  119 aaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggt 218  Q
    |||||||| ||||||| |||||||||| | |||||||||||||||| ||||||||||||||||| | |||||||||||| || |||||||||||||| |     
T  29293511 aaagtgactgagtcactgattcaatccaatttaatccggttaaatatctatataaatttaatctcaagaccgagttatccaagcgagtcatccgagttga 29293412  T
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    |||  || ||||||||||||| ||||||||| || |||||| ||||||||||||    
T  29293411 tccagtttagtcatgcggttcgaccaatgacccaatggttcaaccattgaccca 29293358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 324
Target Start/End: Original strand, 32383776 - 32383991
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||||||||||| || ||||||| || |||||| | ||||||| ||||| |||||||||||   ||||| || |||| |||||||     
T  32383776 ttttagtttttaaa-tgaccgagtcatcggttcaatctgatttaatctgattaaatacctataaaaatttaatcttgagaccgggtcatcttaccgagtt 32383874  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    || ||  |   ||| ||||||||||||||||||||||||||| ||||||||| | |||| ||| | |||||||||| || | |||||||||||||| |||    
T  32383875 attcggtttaatccaattcagtcatgcggttcaaccaatgacacagtggttcaatcattaacctagtgacccagtatccctatcgagtcgatgaccgagc 32383974  T
Q  308 cgagttttaaaactatg 324  Q
    |||||||||||||||||    
T  32383975 cgagttttaaaactatg 32383991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 157 - 324
Target Start/End: Complemental strand, 18942416 - 18942249
Alignment:
Q  157 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtgg 256  Q
    |||||||| ||||| | ||||||||| | |||||||| || |||| |||| |||||| |   |||||||||||||||||||||||||| | |  ||||||    
T  18942416 gttaaatacctataaatatttaatcttaagaccgagtcatttaactgagttatccgatttaatccgattcagtcatgcggttcaaccagtcatccagtgg 18942317  T
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||||| |||||| |  ||||||||||||| ||||||||||||||||||||    
T  18942316 ttcgaccattgacccagtgacccggtacccctaccgagtcgatgaccgagccgagttttaaaactatg 18942249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 324
Target Start/End: Complemental strand, 6459922 - 6459707
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| || |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  |||| || || | |||||||     
T  6459922 ttttagtttttaaa-tggccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacaccgggtcatatgaccgagtt 6459824  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    ||| |  |   |||||||||||||||||||||||||| |||| |||||||||||||||| || |||||||||||||||| || |||||||| |||| |||    
T  6459823 atctggtttaatccgattcagtcatgcggttcaaccagtgacccagtggttcgaccattaactcattgacccagtacccatgccgagtcgacgaccgagc 6459724  T
Q  308 cgagttttaaaactatg 324  Q
     ||||||||||||||||    
T  6459723 tgagttttaaaactatg 6459707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 13957035 - 13956932
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||  || ||||||||||||| ||||||||||||||    
T  13957035 tccggttcagtcatgcggttcaaccagtgactcagtggttcgaccattaactcattgacccagtacctatgccgagtcgatgaccgagccgagttttaaa 13956936  T
Q  319 acta 322  Q
    ||||    
T  13956935 acta 13956932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 14351875 - 14352042
Alignment:
Q  158 ttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggt 257  Q
    ||||||| ||||| ||||||||||| | ||||| || || ||||||||| |||||  |   |||||||||||||||||||||||| ||||||||||||||    
T  14351875 ttaaatacctataaaaatttaatcttaagaccgggtcatataaccgagttatccggtttaatccgattcagtcatgcggttcaactaatgactcagtggt 14351974  T
Q  258 tcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatga 325  Q
    ||||||||| || || ||| ||| | ||| |  ||||||||||||| |||||||||||||||||||||    
T  14351975 tcgaccattaactcactgatccaatgcccctaccgagtcgatgaccgagccgagttttaaaactatga 14352042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 324
Target Start/End: Complemental strand, 35456674 - 35456507
Alignment:
Q  157 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtgg 256  Q
    |||||||| ||||| | ||||||||| | |||| ||| || ||||||||| |||||  |   |||||||||||||||||||||||||| |||||||||||    
T  35456674 gttaaatacctataaatatttaatcttaagaccaagtcatttaaccgagttatccggtttaatccgattcagtcatgcggttcaaccagtgactcagtgg 35456575  T
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||| ||| ||| ||||||||| |  | ||| ||||||| ||||||||||||||||||||    
T  35456574 ttcgaccattgatccaatgaaccagtacccctcccaagttgatgaccgagccgagttttaaaactatg 35456507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 270
Target Start/End: Original strand, 39051843 - 39051984
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| | ||||||| ||||||||||||| || | ||| | |  | |||||    
T  39051843 agtcaccgattaaatccgatttaatccagttaaatagctatataaatttaatcttaagaccgagatatctaaccgagttattcaagttgatatggttcag 39051942  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacc 270  Q
    ||||||||||| | |||||| ||||| |||||||||||||||    
T  39051943 tcatgcggttcgaacaatgattcagtagttcgaccattgacc 39051984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 17644142 - 17644310
Alignment:
Q  157 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtgg 256  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||||||||| |||||| |   ||||||||||||||| ||||| |||| |||  ||||||    
T  17644142 gttaaatacctataaatatttaatcttaagaccgagtcatttaaccgagttatccgatttaatccgattcagtcatgtggttcgaccattgatccagtgg 17644241  T
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatga 325  Q
    |||||||||||||||| ||||||  ||||| |  ||| ||||||||| || ||||||||||||||||||    
T  17644242 ttcgaccattgacccagtgacccgatacccctaccgaatcgatgaccgagtcgagttttaaaactatga 17644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 29823362 - 29823257
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| ||||||||| | |||||| ||| ||||||||||||||||| | |||||||||||||  | ||||||||||||| |||||| |||||||    
T  29823362 tccggttcagttatgcggttcgatcaatgattcactggttcgaccattgacctagtgacccagtacccccgccgagtcgatgaccgagccgaattttaaa 29823263  T
Q  319 actatg 324  Q
    ||||||    
T  29823262 actatg 29823257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 6514364 - 6514413
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaat 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6514364 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaat 6514413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 389601 - 389692
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 200  Q
    ||||||||| |||| ||| |||||||| |||| ||||||| ||||||||||||||||||| |||||||||||||| | |||| ||||||||||    
T  389601 ttttagtttttaaa-tgaacgagtcacggattaaatccgatttaatccggttaaataactgtataaatttaatctcaagaccaagttatctaa 389692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 43581685 - 43581787
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||||||||||||| || ||||| |||||||||| |||| |||||||||||| |||||| |||  |||||||||||||   |||  ||||||||||||    
T  43581685 ttcagtcatgcggttcgactaatgattcagtggttcaaccaatgacccattgactcagtactcttaccgagtcgatgaccggtccggtttttaaaactat 43581784  T
Q  324 gat 326  Q
    |||    
T  43581785 gat 43581787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 23015133 - 23015033
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||||||||||||||||||||||| || ||||||||||| |||| || |||||||||||  |   |||||||||| || | |||| ||||||||||||    
T  23015133 ttcagtcatgcggttcaaccaatgacccaatggttcgaccaatgactcagtgacccagtactttgaccgagtcgatgtccgatccgatttttaaaactat 23015034  T
Q  324 g 324  Q
    |    
T  23015033 g 23015033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 17421380 - 17421303
Alignment:
Q  247 gactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||| || |||| || ||| ||| ||||| | |||||||||||||| ||||||||||||||||||||    
T  17421380 gactcagtggttcgatcaatgactcaatgatccaatacccctctcgagtcgatgaccgagccgagttttaaaactatg 17421303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 33112209 - 33112309
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||||||||||| |||||| |||||||||||| |||||| |||| | ||| | || |||| ||| || ||| |||| |||| |||||||||||||||||||    
T  33112209 ttcagtcatgcagttcaatcaatgactcagtagttcgatcattaatccaataactcagtgcccctgccgaatcgacgaccgagccgagttttaaaactat 33112308  T
Q  324 g 324  Q
    |    
T  33112309 g 33112309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 389696 - 389757
Alignment:
Q  263 cattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||| ||||| ||||||| || ||| ||||||||| ||||||||||||||||||||    
T  389696 cattgacccagtgacctagtacccctgccgaatcgatgaccgagccgagttttaaaactatg 389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 814803 - 814876
Alignment:
Q  251 cagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||||||| ||| |||||| ||||  ||||||||| ||| | | ||||||||||||||||    
T  814803 cagtggttcgaccattgacccagtgatccagtatccttaccgagtcgatcaccgatctgagttttaaaactatg 814876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 33224948 - 33225047
Alignment:
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgat 326  Q
    ||||||||||||||||||||||  ||||||||||||||||||| || ||| ||    |||||  |||||||||||||   |||  |||||||||||||||    
T  33224948 agtcatgcggttcaaccaatgatccagtggttcgaccattgactcagtgatccgacgcccttaccgagtcgatgaccggtccggtttttaaaactatgat 33225047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 38892686 - 38892756
Alignment:
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgat 299  Q
    |||||| |||| |||| |||| ||||| |||||| ||||||||| |||||||||||||||  |||||||||    
T  38892686 tcatgcagttcgaccagtgacccagtgattcgactattgacccagtgacccagtacccttaccgagtcgat 38892756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 23023922 - 23023853
Alignment:
Q  255 ggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||| ||||||| |||| ||||||||||  ||||||||| |||    |||||||||||||||||    
T  23023922 ggttcgaccaatgacccagtgactcagtacccttaccgagtcgatcaccggttcgagttttaaaactatg 23023853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 23023938 - 23023902
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtg 255  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  23023938 tccgattcagtcatgcggttcgaccaatgacccagtg 23023902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 104 - 326
Target Start/End: Original strand, 23611420 - 23611642
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23611420 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccagttaaataactatataaatttaatctaaggaccgagttatctaaccg 23611519  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||  | |||||||||||||    
T  23611520 agttatccgagtggtttcgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattaacccagtatccccgccgagtcgatgacc 23611619  T
Q  304 tagccgagttttaaaactatgat 326  Q
     | ||||||||||||||||||||    
T  23611620 gaaccgagttttaaaactatgat 23611642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 55497672 - 55497505
Alignment:
Q  105 ttattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccga 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55497672 ttattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccga 55497573  T
Q  205 gtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccca 272  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  55497572 gtcatccgagtggttccgattcagtcatgcggttcgatcaatgactcagtggttcgaccattgaccca 55497505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 11792594 - 11792384
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||| ||||||||||||||||||||||||    
T  11792594 attattttagtttctaaagtgaccgactcaccgattcaatccg----------gttaaataactatataaatttattctaaggaccgagttatctaaccg 11792505  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||  | |||||||||||||    
T  11792504 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccagtatccccgccgagtcgatgacc 11792405  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  11792404 gagccgagttttaaaactatg 11792384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 104 - 271
Target Start/End: Complemental strand, 7648242 - 7648075
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7648242 attattttagtttctaaagtgaccgagtcaccaattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 7648143  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgaccc 271  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7648142 agtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgaccc 7648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 110 - 324
Target Start/End: Original strand, 1936397 - 1936610
Alignment:
Q  110 ttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcat 209  Q
    ||||||| |||| ||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |||    
T  1936397 ttagtttttaaa-tgaacgagtcaccgattaaatccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaaccgagccat 1936495  T
Q  210 ccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccg 309  Q
    |||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| || ||    
T  1936496 ccgagttgatccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccctgccgagtcgatgaccgagtcg 1936595  T
Q  310 agttttaaaactatg 324  Q
     ||||||||||||||    
T  1936596 ggttttaaaactatg 1936610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 144 - 324
Target Start/End: Original strand, 25232594 - 25232774
Alignment:
Q  144 ccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaacc 243  Q
    |||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| | |||| |||||||||||||||| |||    
T  25232594 ccgatttaatctggttaaatatctatataaatttaatctcaagaccgagttatctaaccgagccatccgagttgatccggttcagtcatgcggttcgacc 25232693  T
Q  244 aatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  25232694 aatgactcagtggttcgaccattgacccattgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 25232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 108 - 324
Target Start/End: Original strand, 12704544 - 12704759
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| | ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||    
T  12704544 ttttagtttttaaa-tgaactagtcaccgattaaatccgatttaatccggttaaatagttatataaatttaatctcaagaccgagttatctaaccgagtc 12704642  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    |||||||| | |||| |||||| ||||||||| | |||||||||||||||||||||||||||  | ||||||||||||| || | ||||||||||| |||    
T  12704643 atccgagttgatccggttcagtaatgcggttcgatcaatgactcagtggttcgaccattgacttagtgacccagtacccatgcctagtcgatgaccgagc 12704742  T
Q  308 cgagttttaaaactatg 324  Q
    |||||||||||||||||    
T  12704743 cgagttttaaaactatg 12704759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 108 - 327
Target Start/End: Complemental strand, 55675635 - 55675417
Alignment:
Q  108 ttttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtc 207  Q
    ||||||||| |||| ||| ||||||| ||||| |||| || ||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||| |    
T  55675635 ttttagtttttaaa-tgaacgagtcatcgattaaatctgatttaatccagttaaatagctatataaatttaatctcaagaccgagttatctaaccgagcc 55675537  T
Q  208 atccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagc 307  Q
    || |||||   |||| || |||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  55675536 attcgagttaatccggtttagtcttgcggttcgaccaatgactcagtgattcgaccattgacctattgacccagtacccctgtcgagtcgatgaccgagc 55675437  T
Q  308 cgagttttaaaactatgatt 327  Q
    ||||||||||||||||||||    
T  55675436 cgagttttaaaactatgatt 55675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 28359560 - 28359779
Alignment:
Q  107 attttagtttctaaa-gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgag 205  Q
    |||||||||| |||| ||||| |||||||  |||||||  || |||||| ||||||||| ||||||||||| |||||   ||||||| ||| ||||||||    
T  28359560 attttagtttttaaaagtgactgagtcactaattcaatttgatttaatctggttaaatacctatataaattaaatctttagaccgagatatttaaccgag 28359659  T
Q  206 tcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgaccta 305  Q
    |||||||||| | || |||||||||||||||||||| ||||||  || |||||||| |||||||||| ||||||| ||||  || |||||| |||||| |    
T  28359660 tcatccgagttgatctgattcagtcatgcggttcaatcaatgatccaatggttcgatcattgacccagtgacccaatacctctgccgagtcaatgaccga 28359759  T
Q  306 gccgagttttaaaactatga 325  Q
    ||||||||||||||||||||    
T  28359760 gccgagttttaaaactatga 28359779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 324
Target Start/End: Complemental strand, 4414582 - 4414415
Alignment:
Q  157 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtgg 256  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||| ||||| |||||  |   |||||||||||||||||||||||| | |||||||||||    
T  4414582 gttaaatacctataaatatttaatcttaagaccgagtcatttaatcgagttatccggtttaatccgattcagtcatgcggttcaacaagtgactcagtgg 4414483  T
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  4414482 ttcgaccattgacccagtgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 4414415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 324
Target Start/End: Complemental strand, 44352282 - 44352087
Alignment:
Q  129 agtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcag 228  Q
    |||||||| || ||||||| |||||| | ||||||| ||||| |||||||||||||  |||| ||||||| |||||||||||||  | | || |||||||    
T  44352282 agtcaccggtttaatccgatttaatctgattaaatacctatacaaatttaatctaaacaccgggttatcttaccgagtcatccggtttgatctgattcag 44352183  T
Q  229 tcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||| |||| || |||||||||||| ||| || ||||||||||||  || ||||||||||||| | ||||||||||||||||||    
T  44352182 tcatgcggttcaaccagtgacccaatggttcgaccatcgactcagtgacccagtacctatgccgagtcgatgaccgaaccgagttttaaaactatg 44352087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 8260928 - 8261138
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||| |||| ||||||||||||||||||||||||||||||          |||||||  |||||||||||||||| | ||||||||||| ||| ||    
T  8260928 attattttcgtttttaaagtgaccgagtcaccgattcaatccga----------ttaaatagttatataaatttaatctcaagaccgagttatgtaatcg 8261017  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||| | |||| || ||||||| ||||  ||||||||| || |||||| |||||||||||| |||| ||| |||| |  |||||| ||| ||    
T  8261018 agtcatccgagttgatccggtttagtcatgtggtttgaccaatgacccaatggttcaaccattgacccagtgactcagcacccctaccgagtcaatgtcc 8261117  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  8261118 aagccgagttttaaaactatg 8261138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 8274345 - 8274555
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||||| |||| ||||||||||||||||||||||||||||||          |||||||  |||||||||||||||| | ||||||||||| ||| ||    
T  8274345 attattttcgtttttaaagtgaccgagtcaccgattcaatccga----------ttaaatagttatataaatttaatctcaagaccgagttatgtaatcg 8274434  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||||| | |||| || ||||||| ||||  ||||||||| || |||||| |||||||||||| |||| ||| |||| |  |||||| ||| ||    
T  8274435 agtcatccgagttgatccggtttagtcatgtggtttgaccaatgacccaatggttcaaccattgacccagtgactcagcacccctaccgagtcaatgtcc 8274534  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  8274535 aagccgagttttaaaactatg 8274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 29695316 - 29695535
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    ||||||||||||| |  ||||||| |||||||| || ||||| | |||||| | ||||||| ||||| |||||||||||||  |||| ||||||| ||||    
T  29695316 attattttagtttttgcagtgacc-agtcaccggtttaatccaatttaatctgattaaatacctatacaaatttaatctaaacaccgggttatcttaccg 29695414  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    |||||||||  | | || ||||| | ||||||||||||||| |||| || |  ||||||||| ||| || |||||||||| |  ||||||||||||||||    
T  29695415 agtcatccggtttgatctgattcggccatgcggttcaaccagtgacccaataattcgaccatcgactcagtgacccagtatctatgtcgagtcgatgacc 29695514  T
Q  304 tagccgagttttaaaactatg 324  Q
     ||||||||||||||||||||    
T  29695515 gagccgagttttaaaactatg 29695535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 324
Target Start/End: Original strand, 24776120 - 24776269
Alignment:
Q  175 tttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccatt 274  Q
    ||||||||||  |||| |||||||||||||||||||||| | | |||||||||| ||||| |||||||||||||  ||||||||||||||| |||||| |    
T  24776120 tttaatctaaacaccgtgttatctaaccgagtcatccgatttgatccgattcagccatgcagttcaaccaatgatccagtggttcgaccatcgacccagt 24776219  T
Q  275 gacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||| ||||  |  |||||||||| || ||||||||||||||||||||    
T  24776220 gacccaatacctctaccgagtcgatggccgagccgagttttaaaactatg 24776269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 127 - 324
Target Start/End: Complemental strand, 54822244 - 54822047
Alignment:
Q  127 cgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattc 226  Q
    ||||||| |||||||||  || |||||   ||||||||  |||| |||||||| || | ||||||||  |||| |||||| |||||| |   || | |||    
T  54822244 cgagtcatcgattcaatatgatttaatatagttaaatacttatacaaatttaaccttaagaccgagtgttctacccgagttatccgatttaatctgtttc 54822145  T
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||| |||||||||||||||| ||||||| || ||||||||||| | || ||||||||||||| ||||||||||||||||||||    
T  54822144 agtcatgcggttcaaccagtgactcagtggttcgatcattgactcagtgacccagtacacctgccgagtcgatgaccgagccgagttttaaaactatg 54822047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 120 - 324
Target Start/End: Complemental strand, 8132995 - 8132791
Alignment:
Q  120 aagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 219  Q
    ||||| ||||||||  | |||||| ||| |||||  || |||||| ||||| ||||||||||  |  ||||||| | ||| |||||| |||||  |   |    
T  8132995 aagtggccgagtcattggttcaattcgatttaatatggataaatatctataaaaatttaatcctattaccgagtcaactagccgagttatccggtttaat 8132896  T
Q  220 ccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaa 319  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||  |  ||||||||||||| |||||||||||||||    
T  8132895 ccggttcagtcatgcggttcaaccaatgactcagtggttcaaccattaactcagtgacccagtacctctaccgagtcgatgaccgagccgagttttaaaa 8132796  T
Q  320 ctatg 324  Q
    |||||    
T  8132795 ctatg 8132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 26203643 - 26203780
Alignment:
Q  187 accgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccc 286  Q
    |||||||||| ||| |||||||||||  |   |||||||||||||||| ||||||||||||||||  ||||||||||||  || || ||||||||| ||     
T  26203643 accgagttatttaatcgagtcatccggtttaatccgattcagtcatgcagttcaaccaatgactcgatggttcgaccatccactcagtgacccagtgcct 26203742  T
Q  287 ttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
     |||||||||||||| | ||||||||||||||||||||    
T  26203743 ctgtcgagtcgatgatcgagccgagttttaaaactatg 26203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 6354968 - 6355074
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||||||| ||||| |||| ||| |||  | |||||||||||||| ||||||||||||||    
T  6354968 tccggttcagtcatgcggttcaactattgactcaatggttcgaccattaacccagtgactcagaacctctatcgagtcgatgaccgagccgagttttaaa 6355067  T
Q  319 actatga 325  Q
    |||||||    
T  6355068 actatga 6355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 19916434 - 19916534
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||||  ||  | |||||||||| |||||||||||||||||||    
T  19916434 ttcagtcatgcggttcaaccaacgattcagtggttcgaccattaatccaatgacccagtacctctgctgtgtcgatgaccgagccgagttttaaaactat 19916533  T
Q  324 g 324  Q
    |    
T  19916534 g 19916534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 38519384 - 38519287
Alignment:
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||| |||| ||||| ||||||||    ||||||||||||||||||||    
T  38519384 agtcatgcggttcaaccagtgactcaatggttcgaccattaacccagtgacccaatacctttgtcaagtcgatggttgagccgagttttaaaactatg 38519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 24394173 - 24394073
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||| ||| | ||| |||||| ||||| ||||||||||||||||||| |||||||||||||  | ||||||||||||| ||||||||||||||| |||    
T  24394173 ttcagttatgtgattcgaccaataactcactggttcgaccattgacccagtgacccagtacccccgccgagtcgatgaccgagccgagttttaaaattat 24394074  T
Q  324 g 324  Q
    |    
T  24394073 g 24394073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 43245714 - 43245821
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||| |||||||||||||| | ||||| ||||||||||||| ||||| ||||||| ||||| ||||||||||||  || || ||| |||||||    
T  43245714 tccggttcagttatgcggttcaaccagtaactcaatggttcgaccattaacccagtgacccaatacccctgtcgagtcgatagccgagtcgaattttaaa 43245813  T
Q  319 actatgat 326  Q
    ||||||||    
T  43245814 actatgat 43245821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 25510592 - 25510487
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||||||||||  |||||||||||||||||| ||||||||| |||| ||| ||| |||||||| ||||||  |||||||| ||||   ||||||||||||    
T  25510592 tccgattcagttgtgcggttcaaccaatgacccagtggttcaaccaatgaaccagtgacccagcacccttaccgagtcgacgaccggtccgagttttaaa 25510493  T
Q  319 actatg 324  Q
    ||||||    
T  25510492 actatg 25510487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 32988237 - 32988342
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||| ||||| | ||||||| ||||||   |||||||||| ||   ||||||||||||    
T  32988237 tccgattctttcatgcggttcgaccaatgactcagtggttcgaccaatgacctagtgacccactaccctcaccgagtcgatggccggtccgagttttaaa 32988336  T
Q  319 actatg 324  Q
    ||||||    
T  32988337 actatg 32988342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 2039213 - 2039104
Alignment:
Q  193 ttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcg 292  Q
    ||||||||||| ||||||||| |   |||| |||||| ||| |||||||||| ||||||||||||||||||  |||| |||||||||| || ||||  ||    
T  2039213 ttatctaaccgggtcatccgatttaatccggttcagtaatgaggttcaaccagtgactcagtggttcgaccgatgactcattgacccaataaccttaccg 2039114  T
Q  293 agtcgatgac 302  Q
    ||||||||||    
T  2039113 agtcgatgac 2039104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 2859524 - 2859419
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    ||||||||  |||||| |||| |||| |||| |||||||||||||||||||||| ||||||| |||||||  ||||||||| |||   | ||||||||||    
T  2859524 tccgattctttcatgcagttcgaccagtgacccagtggttcgaccattgacccagtgacccaatacccttaccgagtcgatcaccggtctgagttttaaa 2859425  T
Q  319 actatg 324  Q
    ||||||    
T  2859424 actatg 2859419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 7362220 - 7362121
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||| |||||||||||||||||||| | ||||||||||||||| |  || ||| ||| |||| ||||||||||||||||| | || ||||||||||||||    
T  7362220 ttcaatcatgcggttcaaccaatgatttagtggttcgaccatt-aatcagtgatccaatacctttgtcgagtcgatgaccgaaccaagttttaaaactat 7362122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 38465269 - 38465204
Alignment:
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccctt 288  Q
    ||||||||||||||||| ||||||||||||||| ||| |||| ||||||| |||| ||||||||||    
T  38465269 attcagtcatgcggttcgaccaatgactcagtgattcaaccaatgacccaatgactcagtaccctt 38465204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 18707485 - 18707551
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    |||||||||||| |||||||||||||||||| ||||||||| || ||||| ||| ||||| ||||||    
T  18707485 tccgattcagtcgtgcggttcaaccaatgacacagtggttcaacaattgaaccagtgacctagtacc 18707551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 293515 - 293652
Alignment:
Q  186 gaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacc 285  Q
    |||||||||||   |||||||||||||  |   |||||||||||||||||||||||||| |||| || |||||||||||  ||| || |||||||||  |    
T  293515 gaccgagttatacgaccgagtcatccggtttagtccgattcagtcatgcggttcaaccagtgacccaatggttcgaccaacgactcagtgacccagtgac 293614  T
Q  286 cttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    ||   |||||| ||||||   |||| ||||||||||||    
T  293615 ctcaccgagtcaatgaccggtccgatttttaaaactat 293652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 34856104 - 34856052
Alignment:
Q  227 agtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgaccc 279  Q
    ||||||||||||||||||||||  ||||||||||||||||||| || ||||||    
T  34856104 agtcatgcggttcaaccaatgatccagtggttcgaccattgactcagtgaccc 34856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 41849020 - 41848951
Alignment:
Q  257 ttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatgat 326  Q
    |||||||||||||||| |||||||||||||||  ||||||||| |||    ||| |||||||||||||||    
T  41849020 ttcgaccattgacccagtgacccagtacccttaccgagtcgatcaccggttcgaattttaaaactatgat 41848951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 13428782 - 13428882
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactat 323  Q
    |||||| |||||||||||  | ||||||||||||||||||||| |||||  ||| |||||||| ||| | ||  |||| | |||||| |||||||| |||    
T  13428782 ttcagttatgcggttcaattagtgactcagtggttcgaccattaacccagcgacgcagtacccctgttgtgttaatgatcgagccgaattttaaaattat 13428881  T
Q  324 g 324  Q
    |    
T  13428882 g 13428882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 28445662 - 28445586
Alignment:
Q  190 gagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccatt 266  Q
    |||||||||||  ||||||||| ||| | || |||||||||| || ||||||||||||||||| | |||| ||||||    
T  28445662 gagttatctaattgagtcatccaagttgatctgattcagtcacgcagttcaaccaatgactcaattgttcaaccatt 28445586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 41866755 - 41866652
Alignment:
Q  222 gattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaact 321  Q
    |||||| |||||||||||||||| ||||    ||||||||||| ||| ||| ||||||| |  ||||  |||||||||||||   |||| ||||||||||    
T  41866755 gattcactcatgcggttcaaccattgacc---tggttcgaccaatgatccagtgacccaatgaccttaccgagtcgatgaccggtccgatttttaaaact 41866659  T
Q  322 atgattc 328  Q
    |||||||    
T  41866658 atgattc 41866652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 9374909 - 9374878
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcacc 135  Q
    ||||||||||||||||||||||||||||||||    
T  9374909 attattttagtttctaaagtgaccgagtcacc 9374878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 7362322 - 7362261
Alignment:
Q  121 agtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatct 182  Q
    |||| |||||||| || |||||||||| |||||| ||||||||| ||||  |||||||||||    
T  7362322 agtggccgagtcatcggttcaatccgatttaatctggttaaatatctattgaaatttaatct 7362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 12820254 - 12820323
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtaccctt 288  Q
    ||||||||  ||||||||||| |||||   | |||||||||||||||||||  | |||||||||||||||    
T  12820254 tccgattctctcatgcggttcgaccaaccgcccagtggttcgaccattgacttagtgacccagtaccctt 12820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 124 - 326
Target Start/End: Original strand, 10935 - 11138
Alignment:
Q  124 gaccgagtca-ccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 222  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10935 gaccgagtcatccgatttaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 11034  T
Q  223 attcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaacta 322  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||||||||    
T  11035 atttagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgaccgagccgagttttaaaacta 11134  T
Q  323 tgat 326  Q
    ||||    
T  11135 tgat 11138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 104 - 327
Target Start/End: Complemental strand, 52129 - 51906
Alignment:
Q  104 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 203  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  52129 attattatggtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaatatcaatacaaatttaatctaaggaccgaattatctaaccg 52030  T
Q  204 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacc 303  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||  | |||||||||||||    
T  52029 agtcatccgagtggttccggttcagtcatgcggtttgaccaatgactctgtggttcgaccattgactcattgacccagtacccccgccgagtcgatgacc 51930  T
Q  304 tagccgagttttaaaactatgatt 327  Q
     |||||||||||||||||||||||    
T  51929 gagccgagttttaaaactatgatt 51906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 111 - 325
Target Start/End: Original strand, 17752 - 17956
Alignment:
Q  111 tagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatc 210  Q
    |||||| |||||||||||||||||||||||||||          |||||||||| ||||||||||| |||||   ||||||||||| ||||||| |||||    
T  17752 tagtttttaaagtgaccgagtcaccgattcaatc----------cggttaaatacctatataaattgaatctctagaccgagttatttaaccgaatcatc 17841  T
Q  211 cgagtggttccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccga 310  Q
    ||||| | || | ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||| || |||||  |||  | ||| ||    
T  17842 cgagttgatctggttcagtcatgcggttcaaccaatgactcaatggttcgaccattaacccaatgactcagtacccctgccgagtgaatggtcgagctga 17941  T
Q  311 gttttaaaactatga 325  Q
    |||||||||||||||    
T  17942 gttttaaaactatga 17956  T

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Target: scaffold0043 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 149 - 324
Target Start/End: Complemental strand, 64520 - 64345
Alignment:
Q  149 ttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggttcaaccaatga 248  Q
    |||||| | ||||||| ||||| ||||||||| |||  |||| ||||||| | |||||||||||  | | |||||||||||||||||||||||||| |||    
T  64520 ttaatctgattaaatatctatacaaatttaatttaaacaccgggttatcttatcgagtcatccggtttgatccgattcagtcatgcggttcaaccagtga 64421  T
Q  249 ctcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    | || |||||||||||| ||| || ||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  64420 cccaatggttcgaccatcgactcagtgacccagtacctatgtcgagtcgatgaccgagccgagttttaaaactatg 64345  T

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Target: scaffold0116 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 7944 - 7839
Alignment:
Q  219 tccgattcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaa 318  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| ||| ||||||||||||| ||||||||||||||    
T  7944 tccggttcagtcatgcggttcaaccaacgactcagtggttcgaccattaacccaatgactcagtacctttgccgagtcgatgaccgagccgagttttaaa 7845  T
Q  319 actatg 324  Q
    ||||||    
T  7844 actatg 7839  T

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Target: scaffold0712 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 4845 - 5030
Alignment:
Q  138 ttcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggt 237  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||| | |||||  | ||||||| |||| ||  |  |   || |||||||||| ||||     
T  4845 ttcaatccgatttaatctggttaaatacctataaaaatttaatcttaagaccggatcatctaactgagttatttggtttaatctgattcagtcaagcggc 4944  T
Q  238 tcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    || ||||  |||||||||||||||||||| ||| | |||||||  |||||   ||||||||||||| ||||||||||||||||||||    
T  4945 tcgaccagcgactcagtggttcgaccattaaccgagtgacccaacaccctac-cgagtcgatgaccgagccgagttttaaaactatg 5030  T

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Target: scaffold0709 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 4865 - 5050
Alignment:
Q  138 ttcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccgattcagtcatgcggt 237  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||| | |||||  | ||||||| |||| ||  |  |   || |||||||||| ||||     
T  4865 ttcaatccgatttaatctggttaaatacctataaaaatttaatcttaagaccggatcatctaactgagttatttggtttaatctgattcagtcaagcggc 4964  T
Q  238 tcaaccaatgactcagtggttcgaccattgacccattgacccagtacccttgtcgagtcgatgacctagccgagttttaaaactatg 324  Q
    || ||||  |||||||||||||||||||| ||| | |||||||  |||||   ||||||||||||| ||||||||||||||||||||    
T  4965 tcgaccagcgactcagtggttcgaccattaaccgagtgacccaacaccctac-cgagtcgatgaccgagccgagttttaaaactatg 5050  T

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Target: scaffold0131 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 7876 - 7934
Alignment:
Q  224 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattgacccattgacccagt 282  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  7876 ttcagtcatgcgattcaaccaatgactcagtggttcgaccaatgactcattgacccagt 7934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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