View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2551_high_13 (Length: 203)
Name: NF2551_high_13
Description: NF2551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2551_high_13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 33237590 - 33237389
Alignment:
| Q |
1 |
taaaacaatttaatttcttcgttcatctgtgacgaactcatttaaaaaactgacagaaatgactaaagcgtctaacatctataacttagtgatcaagaaa |
100 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
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| T |
33237590 |
taaaacaatttaatttcttcgttcatctatgacgaactcata-aaaaaactgacagaaatgactaaagcgtctaacatctataactttgtgattaagaaa |
33237492 |
T |
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| Q |
101 |
ctaaaatagaacgaaaaataaacttaacggacctaggtgtcttacatttataacttaaggaaccaaaatggaacgaaaagaagatatataacttacgata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33237491 |
ctaaaatagaacgaaaaataaacttaacggacctaggtgtcttacatttataacttaaggaaccaaaatggaacgaaaagaagatatataacttacgata |
33237392 |
T |
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| Q |
201 |
cac |
203 |
Q |
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||| |
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| T |
33237391 |
cac |
33237389 |
T |
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