View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2551_low_10 (Length: 263)
Name: NF2551_low_10
Description: NF2551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2551_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 51405228 - 51405474
Alignment:
| Q |
1 |
cttatggtatgagaatggcagaacatccaggaattttactccatgttgttaagttcatttctccacctggaatgacattgtcttttggtgctaaattggt |
100 |
Q |
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| T |
51405228 |
cttatggtatgagaatggcagaacatccaggaattttactccatgttgttaagttcatttctccacctggaatgacattgtcttttggtgctaaattggt |
51405327 |
T |
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| Q |
101 |
tggtgtagcacaagataagagcaaaacagttgtgattgatgatattgaaggtagccatgatggtagtaaaaatcaagatgaacaactctggagtgaattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51405328 |
tggtgtagcacaagataagagcaaaacagttgtgattgatgatattgaaggtagccatgatggtagtaaaaatcaagatgaacaactctggagtgaattc |
51405427 |
T |
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| Q |
201 |
catagtgcaaagagcatgaatgaagagtcaattaagtatgaggaaag |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51405428 |
catagtgcaaagagcatgaatgaagagtcaattaagtatgaggaaag |
51405474 |
T |
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