View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2552_low_25 (Length: 325)
Name: NF2552_low_25
Description: NF2552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2552_low_25 |
 | |
|
| [»] chr7 (15 HSPs) |
| |
|
| [»] chr1 (1 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22889725 - 22889411
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889725 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
22889626 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889625 |
ccaaatccaatagttttcaaaaacacttccagtgaaagcgtgtcttctttctcaactacttttttatttgccataatacctcaatatgcaaatattggtg |
22889526 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
22889525 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
22889426 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22889425 |
tagcaaccatgtttt |
22889411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22815460 - 22815146
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
22815460 |
atcatcacatttaaatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaaagagccaaaggatatgctttctat |
22815361 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| || | || ||| |
|
|
| T |
22815360 |
ccaaatcctatagttttcaaaaacacttccaatgaaagtgtgtcttctttctcaactacttttgtgtttgcaataagacctcaatatccaccttttagtg |
22815261 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22815260 |
gccaaggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaacgattccaacaatggaaacag |
22815161 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
22815160 |
taacaaccatgtttt |
22815146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22876349 - 22876035
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
22876349 |
atcatcaaatttatatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaatatgaaaaaggacatggtttctat |
22876250 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| ||| |
|
|
| T |
22876249 |
ccaaatcctatagttttcaaaaacacttccaatggaagtgtgtcttctttctcaactacttttgtatttgccataagacctcaatatccaactattagtg |
22876150 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
| ||||||||||||||||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
22876149 |
gtgatggaattgtttttgttgtttctcctacaaaagggctaccaaactcactaccacgtcaataccttggtctctttaacaattcaaacaatggaaacag |
22876050 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22876049 |
tagcaaccatgtttt |
22876035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22805742 - 22805428
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||||| || | ||| |||| ||||||| |
|
|
| T |
22805742 |
atcatcacatttatatcttgatggttttgctgagttaacctcagatggcatactaagactcaccaatgatacagaacaagtaataggtcatgctttctat |
22805643 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || || |
|
|
| T |
22805642 |
ccaaatccaatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaccttttactg |
22805543 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
22805542 |
gccatggaattgtttttgttctttctccaacaaaagggctaccaaattcactaccaaatcaataccttggtctctttaatgattccaacaatggaaacag |
22805443 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
22805442 |
tggcaaccatgtttt |
22805428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22898696 - 22898382
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||| | ||||||||||| | ||||||||||||||| | ||| |||| ||||| ||||||| |
|
|
| T |
22898696 |
atcatcacatttatatcttgatggtattgctaatttaacctccaatggcttacttagactcaccaatgataccaagcaagaaaaagcacatgctttctat |
22898597 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| || |||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||| | || ||| |
|
|
| T |
22898596 |
ccaaatcctatagttttcaagaacacttctaatggaagtgtttcttctttctcaactacttttgtgtttgccataagacctcaatatccaactcttagtg |
22898497 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||| |||||| || |
|
|
| T |
22898496 |
gccatggaattgtttttgttgtctctcctacaaaagggctaccaaattcactacaaagtcaataccttggtctctttaacaaatccaacaatggaaatag |
22898397 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22898396 |
tagcaaccatgtttt |
22898382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22810077 - 22809763
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
22810077 |
atcatcacatttatatcttgatggtattgctgagttaaccccagatggcttactaagactcaccaatgatacagaacatgaaaaaggacatgctttctat |
22809978 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| | || || |
|
|
| T |
22809977 |
ccaaatcctgtagttttcaaaaacactatcagtgaaagtgtatcttctttctcaactacttttgtatttgccataagacctcaatatccaactcttagtt |
22809878 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||| |||||| |||| || ||||||||||| ||| ||||| | |||||||||| ||||||||||||||| | ||||||| ||||||||| |
|
|
| T |
22809877 |
cccatggaattgtatttgttgtttcacctacaaaagggctgccaaattcaaaagcaagtcaatatcttggtctctttaaccaatccaacaatggaaacag |
22809778 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
22809777 |
tagtaaccatgtttt |
22809763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22840485 - 22840171
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| | ||| ||||||||||| |||||||||||||||| || ||| |||||||| | ||||||| |
|
|
| T |
22840485 |
atcatcaaatttatatcttgatggtaccgctgagttagcctcaactggcttactaagactcaccaatgatacaaaacaagaaaaaggacaagctttctat |
22840386 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| |||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||| |||||| | || |||| ||| | || ||| |
|
|
| T |
22840385 |
ccaaatcctatagttttcaaaaacacttccagcggaagtgtttcttctttctcaactacttttgtattttccataaaatcttcatatccaactcttagtg |
22840286 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||| | |
|
|
| T |
22840285 |
gccatggaattgttttcgttatttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaaccaatccaacattggaaacgg |
22840186 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
22840185 |
tggcaaccatgtttt |
22840171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 12 - 325
Target Start/End: Complemental strand, 22880996 - 22880683
Alignment:
| Q |
12 |
tcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctatc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||||||| |||||||||| ||||||| ||| |||||||| |
|
|
| T |
22880996 |
tcatcacatttatatcttgatggtattgctaaggtaaactcaaatggcttactaagactcaccaatgacacagaaagagccaaaggatatgctttctatc |
22880897 |
T |
|
| Q |
112 |
caaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtgg |
211 |
Q |
| |
|
||||||| |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| | | || ||| || || | |||| |
|
|
| T |
22880896 |
caaatcctatagttttcaaaaacacttccaatgaaagtgtgtattctttctcaactacttttgtatttgccatcaaatctaggtatacagctacttgtgg |
22880797 |
T |
|
| Q |
212 |
ccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacagt |
311 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||| || || ||||| |||||||| | |
|
|
| T |
22880796 |
ccatggacttgtttttgttgtttcaccaacaaaagggctaccaaattcgctaccaagtaaataccttggtctctttgacactttcaacactggaaacatt |
22880697 |
T |
|
| Q |
312 |
agcaaccatgtttt |
325 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22880696 |
agcaaccatgtttt |
22880683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22831464 - 22831150
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| | ||| | || | ||| ||||||| |
|
|
| T |
22831464 |
atcatcacatttatatcttgatggtattgctgagttaacttcagatggcttactaagactcaccaatgataccgggccagatacagcatatgctttctat |
22831365 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
||||||| |||||||| ||||||||||| | || ||||||||| |||||||||||||||||||||||| |||||| | | ||| || |||| ||| |
|
|
| T |
22831364 |
ccaaatcatatagtttttaaaaacacttcgaatgcaagtgtgtcatctttctcaactacttttgtatttaccataaaatccatgtatccatctattagtg |
22831265 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||||| | ||||||| ||||||||| |
|
|
| T |
22831264 |
gccatggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaaatcaatactttggtctctttaactactccaacattggaaacag |
22831165 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22831164 |
tagcaaccatgtttt |
22831150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 22842590 - 22842271
Alignment:
| Q |
18 |
catttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctatccaaatc |
117 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||||||| || |||||||||||||||| || | ||||||| |||| ||| |||||||| | |
|
|
| T |
22842590 |
catttgtatcttgatggtattgctgagttaacctcaggtggcttaccaagactcaccaatgatacaaaacaatacaaaggtcatgctttatatccaaaac |
22842491 |
T |
|
| Q |
118 |
caatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgc------aaatattggtgg |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| | || | || | || |||| |
|
|
| T |
22842490 |
caatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttttatttgccataaaatctccagatccagaactaactcttagtgg |
22842391 |
T |
|
| Q |
212 |
ccatggaattgttt--ttgtt----atttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtgga |
305 |
Q |
| |
|
||| || ||||||| ||||| |||| || |||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
22842390 |
ccacgggattgttttgttgtttcaactttcacctacaaaagggcaaccaaattcactaccaggtcaataccttggtctctttaacaattccaacaatgga |
22842291 |
T |
|
| Q |
306 |
aacagtagcaaccatgtttt |
325 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
22842290 |
aatagtagcaaccatgtttt |
22842271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22894377 - 22894063
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
|||||| ||||| |||||||||||||||||| | ||||| | ||||||||||||| |||||||||||| || || ||| |||| ||||| ||||||| |
|
|
| T |
22894377 |
atcatctcatttgtatcttgatggtattgctaatttaacctccaatggcttactaagactcaccaatgacaccaaacaagaaaaagcacatgctttctat |
22894278 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
||||| || |||||||| || |||||||| | || |||||| ||||| |||||||||||||||||||||||||||| || |||| | ||| | | ||| |
|
|
| T |
22894277 |
ccaaaccctatagttttgaagaacacttccaatggaagtgtttcttcattctcaactacttttgtatttgccataagacatcaaggtccaacttatagtg |
22894178 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| ||||||| | | || |||||||||||||||| |||||||||||| |||||| |
|
|
| T |
22894177 |
gccatggaattgtttttgttctttctcctacaaaagggctaccaaattcactccaaggttcataccttggtctctttgacgattccaacaatggaaatcc |
22894078 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
22894077 |
tagcaaccacgtttt |
22894063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 22858852 - 22858677
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| | ||| | || ||||| ||||||| |
|
|
| T |
22858852 |
atcatcacatttatatcttgatggtattgctgagttaacttcaactggcttactaagactcaccaatgatatcgggcaagatacagcacatgctttctat |
22858753 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataa |
186 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22858752 |
ccaaatcctatagttttcaaaaacacttctagtgaaactgtgtcttctttctcaactacttttttatttgccataa |
22858677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 22885930 - 22885713
Alignment:
| Q |
104 |
tttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaat |
203 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||| |||| | || ||||| ||| | |
|
|
| T |
22885930 |
tttctatccaaatcctatagttttcaaaaacactc--agtgaaagtgtgtcttctttctcaactaattctttatttgctataaaatcttaatatccaact |
22885833 |
T |
|
| Q |
204 |
attggtggccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtg |
303 |
Q |
| |
|
| |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| | | |||||||||||||| |||| ||||||||| || |
|
|
| T |
22885832 |
catagtggccatggaattgtttttgttatttcacctacaaaagggctaccaaattcactacaatattaataccttggtctc--taacaattccaacaatg |
22885735 |
T |
|
| Q |
304 |
gaaacagtagcaaccatgtttt |
325 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
22885734 |
gaaacagtagcagccatgtttt |
22885713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 22914101 - 22913787
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| | | ||||||||| || | | | || || |||| ||||||| |
|
|
| T |
22914101 |
atcatcacatttatatcttgatggtgttgctgaattaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctat |
22914002 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
||||| || ||||||||||| || |||| | ||| ||||||||||| ||||||||||| |||||||||| | || | | | | ||| || ||| |
|
|
| T |
22914001 |
ccaaaccctatagttttcaacaatggaagtagtagtaatgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtg |
22913902 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| || || || || |||| |||||||| |
|
|
| T |
22913901 |
gccatggaattgtttttgttctttctccaacaaaagggttaccaaattcactaccaagtcaataccttggtctattcaatgaatcaaacaatggaaacaa |
22913802 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
22913801 |
caataaccatgtttt |
22913787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 22858665 - 22858584
Alignment:
| Q |
241 |
caaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacagtagcaaccatgt |
322 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
22858665 |
caaaagggctaccagattcacttccaaaccaataccttggtccctttaacgattccaacattggaaacactagcaaccatgt |
22858584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 21150281 - 21150595
Alignment:
| Q |
11 |
atcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||||||||| || | ||| |||| ||||||| |
|
|
| T |
21150281 |
atcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctttctat |
21150380 |
T |
|
| Q |
111 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatgcaaatattggtg |
210 |
Q |
| |
|
|||||||| ||||||||| |||||||||| | |||||||||| |||||| ||||||||||||||||||||||||| |||||||||| ||| | |||||| |
|
|
| T |
21150381 |
ccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatatccaactcttggtg |
21150480 |
T |
|
| Q |
211 |
gccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacag |
310 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
21150481 |
gccatggaattgtttttgttatttctcctacaaaagagctaccaaattcactaccaacacaataccttggtctctttaacaattccaacaatggaaacag |
21150580 |
T |
|
| Q |
311 |
tagcaaccatgtttt |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21150581 |
tagcaaccatgtttt |
21150595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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