View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2553_high_12 (Length: 249)
Name: NF2553_high_12
Description: NF2553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2553_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 2992469 - 2992304
Alignment:
| Q |
45 |
gtgcttgaactttgttacctagctattgcttgttttgggttataggtcacgttttgttgttcttttcgtgcttgtgcctaatttgtaacataacttgata |
144 |
Q |
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| T |
2992469 |
gtgcttgaactttgttacctagctattgcttgttttgggttataggtcacgttttgttgttcttttcgtgcttgtgcctaatttgtaacataacttgata |
2992370 |
T |
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| Q |
145 |
ttcttttgaaccctatccttacactacttatgcaattggttctgtttttggtgctgcactcttcga |
210 |
Q |
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| T |
2992369 |
ttcttttgaaccctatccttacactacttatgcaattggttctgtttttggtgctgcactcttcga |
2992304 |
T |
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