View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2554_high_3 (Length: 431)

Name: NF2554_high_3
Description: NF2554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2554_high_3
NF2554_high_3
[»] chr4 (43 HSPs)
chr4 (147-415)||(37925884-37926150)
chr4 (27-133)||(37926200-37926306)
chr4 (27-132)||(6382563-6382668)
chr4 (40-109)||(36306446-36306515)
chr4 (62-138)||(15987553-15987629)
chr4 (53-132)||(31918875-31918954)
chr4 (27-110)||(55826912-55826995)
chr4 (61-138)||(4766638-4766715)
chr4 (27-132)||(11027773-11027878)
chr4 (30-131)||(19549252-19549353)
chr4 (64-132)||(8844169-8844237)
chr4 (64-132)||(8857133-8857201)
chr4 (68-132)||(10286969-10287033)
chr4 (62-138)||(37348818-37348894)
chr4 (31-139)||(40420925-40421033)
chr4 (64-132)||(53910165-53910233)
chr4 (27-138)||(7608665-7608776)
chr4 (45-132)||(25265514-25265601)
chr4 (27-138)||(36918760-36918871)
chr4 (40-90)||(7985425-7985475)
chr4 (49-138)||(11123178-11123267)
chr4 (62-131)||(30034338-30034407)
chr4 (69-138)||(44887601-44887670)
chr4 (51-132)||(47550666-47550747)
chr4 (62-138)||(13015724-13015800)
chr4 (62-110)||(42907531-42907579)
chr4 (62-138)||(44317239-44317315)
chr4 (64-132)||(47239711-47239779)
chr4 (51-130)||(4741569-4741647)
chr4 (51-138)||(12076002-12076088)
chr4 (27-138)||(26564526-26564637)
chr4 (67-110)||(43892234-43892277)
chr4 (62-132)||(1724634-1724704)
chr4 (27-109)||(5902903-5902985)
chr4 (62-132)||(6482349-6482419)
chr4 (62-132)||(25299212-25299282)
chr4 (40-110)||(29527509-29527579)
chr4 (27-109)||(43553106-43553188)
chr4 (34-75)||(3504965-3505006)
chr4 (51-132)||(53906589-53906670)
chr4 (62-110)||(42774484-42774531)
chr4 (68-108)||(43351761-43351801)
chr4 (62-110)||(48459209-48459257)
[»] chr7 (43 HSPs)
chr7 (27-132)||(23533952-23534057)
chr7 (27-132)||(35074168-35074273)
chr7 (27-130)||(23475611-23475714)
chr7 (27-132)||(18125516-18125621)
chr7 (51-138)||(44794338-44794425)
chr7 (62-138)||(10072182-10072258)
chr7 (63-138)||(45709176-45709251)
chr7 (27-138)||(45886053-45886164)
chr7 (27-132)||(16865869-16865974)
chr7 (27-132)||(25905328-25905433)
chr7 (27-132)||(29292327-29292432)
chr7 (27-132)||(30650330-30650435)
chr7 (28-110)||(12980096-12980178)
chr7 (62-132)||(17885146-17885216)
chr7 (62-132)||(38140113-38140183)
chr7 (51-132)||(2632281-2632361)
chr7 (62-138)||(39456302-39456378)
chr7 (27-110)||(21702401-21702484)
chr7 (62-109)||(23328333-23328380)
chr7 (62-132)||(17851565-17851635)
chr7 (62-132)||(18826193-18826263)
chr7 (62-132)||(37196311-37196381)
chr7 (45-110)||(17884954-17885019)
chr7 (40-133)||(43550779-43550872)
chr7 (32-132)||(11473065-11473165)
chr7 (45-132)||(25980230-25980317)
chr7 (67-138)||(33840768-33840839)
chr7 (42-109)||(44734662-44734729)
chr7 (62-133)||(7779706-7779779)
chr7 (62-132)||(8906934-8907004)
chr7 (45-110)||(3156747-3156812)
chr7 (65-110)||(26072573-26072618)
chr7 (65-110)||(26096360-26096405)
chr7 (49-110)||(26622674-26622735)
chr7 (63-108)||(31393753-31393798)
chr7 (27-132)||(37578963-37579068)
chr7 (51-132)||(38152600-38152681)
chr7 (27-112)||(41741737-41741822)
chr7 (70-110)||(10996178-10996218)
chr7 (27-127)||(27850612-27850712)
chr7 (29-133)||(29855733-29855837)
chr7 (94-138)||(37217653-37217697)
chr7 (62-110)||(43507154-43507202)
[»] chr6 (22 HSPs)
chr6 (27-138)||(2367015-2367126)
chr6 (27-138)||(29340461-29340572)
chr6 (27-138)||(29342347-29342458)
chr6 (27-132)||(32853539-32853644)
chr6 (62-132)||(5863695-5863765)
chr6 (51-132)||(3484235-3484316)
chr6 (62-138)||(14254649-14254725)
chr6 (62-130)||(32959567-32959635)
chr6 (31-138)||(3245040-3245145)
chr6 (27-110)||(7978684-7978767)
chr6 (51-138)||(10188386-10188473)
chr6 (62-132)||(27534390-27534460)
chr6 (49-108)||(24225419-24225478)
chr6 (62-132)||(32052751-32052821)
chr6 (51-132)||(10142829-10142910)
chr6 (62-110)||(253144-253192)
chr6 (45-132)||(9402238-9402325)
chr6 (45-132)||(30815946-30816033)
chr6 (29-131)||(10925795-10925897)
chr6 (62-132)||(12141092-12141162)
chr6 (27-132)||(1948141-1948244)
chr6 (62-131)||(7394209-7394278)
[»] chr8 (23 HSPs)
chr8 (62-132)||(14687128-14687198)
chr8 (27-138)||(34301442-34301553)
chr8 (40-132)||(11255306-11255398)
chr8 (27-138)||(8545701-8545812)
chr8 (68-138)||(6388894-6388964)
chr8 (27-132)||(24927644-24927749)
chr8 (51-132)||(29109130-29109211)
chr8 (27-138)||(28977402-28977513)
chr8 (62-109)||(40248665-40248712)
chr8 (62-132)||(39445885-39445955)
chr8 (63-132)||(2076160-2076229)
chr8 (29-138)||(17084460-17084569)
chr8 (45-138)||(33633288-33633381)
chr8 (66-132)||(17220412-17220478)
chr8 (45-138)||(15068914-15069007)
chr8 (27-132)||(24870311-24870416)
chr8 (51-132)||(32302755-32302836)
chr8 (27-110)||(34776179-34776262)
chr8 (62-132)||(1063204-1063274)
chr8 (51-109)||(5793249-5793306)
chr8 (64-110)||(9476393-9476439)
chr8 (51-132)||(4231031-4231112)
chr8 (62-131)||(20399332-20399401)
[»] scaffold0022 (1 HSPs)
scaffold0022 (51-132)||(90292-90373)
[»] chr5 (27 HSPs)
chr5 (28-108)||(8020274-8020355)
chr5 (62-138)||(15889900-15889976)
chr5 (27-132)||(22695190-22695295)
chr5 (51-138)||(40517496-40517583)
chr5 (27-112)||(10126823-10126908)
chr5 (62-138)||(17853604-17853679)
chr5 (27-107)||(42987766-42987846)
chr5 (27-110)||(33862471-33862554)
chr5 (62-132)||(5909006-5909076)
chr5 (62-138)||(20973809-20973885)
chr5 (52-108)||(29664631-29664687)
chr5 (62-132)||(13402327-13402397)
chr5 (51-132)||(12834889-12834970)
chr5 (27-132)||(27088640-27088745)
chr5 (59-131)||(17152821-17152893)
chr5 (28-128)||(18452236-18452336)
chr5 (62-138)||(28045341-28045417)
chr5 (62-110)||(30996314-30996362)
chr5 (64-132)||(40188043-40188110)
chr5 (27-138)||(6093394-6093505)
chr5 (29-108)||(39422079-39422158)
chr5 (62-132)||(4920527-4920597)
chr5 (34-132)||(23045309-23045407)
chr5 (64-110)||(27900787-27900833)
chr5 (46-107)||(10833893-10833954)
chr5 (27-132)||(38006759-38006864)
chr5 (82-138)||(36579595-36579651)
[»] chr3 (26 HSPs)
chr3 (27-132)||(7470066-7470171)
chr3 (62-132)||(29284030-29284100)
chr3 (45-110)||(23580544-23580609)
chr3 (27-132)||(31127083-31127188)
chr3 (51-132)||(44107111-44107192)
chr3 (27-132)||(44179022-44179127)
chr3 (51-132)||(44252436-44252517)
chr3 (45-132)||(34154111-34154198)
chr3 (51-132)||(34025654-34025735)
chr3 (51-132)||(49579759-49579840)
chr3 (62-138)||(39728371-39728447)
chr3 (62-133)||(22536167-22536238)
chr3 (49-132)||(44638970-44639053)
chr3 (27-110)||(44953723-44953806)
chr3 (63-109)||(29842025-29842071)
chr3 (63-132)||(4557629-4557698)
chr3 (27-108)||(17146438-17146519)
chr3 (62-131)||(39655586-39655655)
chr3 (62-138)||(54316832-54316908)
chr3 (6-108)||(37032432-37032535)
chr3 (27-111)||(43582296-43582377)
chr3 (40-110)||(53631618-53631688)
chr3 (51-132)||(49025377-49025458)
chr3 (51-108)||(52197871-52197928)
chr3 (62-110)||(23154330-23154378)
chr3 (68-132)||(52572309-52572373)
[»] chr2 (20 HSPs)
chr2 (27-132)||(10208718-10208823)
chr2 (27-132)||(30846640-30846745)
chr2 (27-131)||(13830432-13830536)
chr2 (27-132)||(24414420-24414525)
chr2 (51-110)||(37999202-37999261)
chr2 (40-138)||(6028190-6028288)
chr2 (62-138)||(37473053-37473129)
chr2 (62-132)||(8916259-8916329)
chr2 (62-132)||(9632093-9632163)
chr2 (51-133)||(29657107-29657189)
chr2 (51-132)||(36128420-36128501)
chr2 (64-132)||(25210018-25210086)
chr2 (27-110)||(45115298-45115381)
chr2 (62-132)||(7314973-7315043)
chr2 (62-128)||(16105323-16105389)
chr2 (62-127)||(37106406-37106471)
chr2 (27-132)||(45256519-45256624)
chr2 (62-138)||(18106402-18106478)
chr2 (72-132)||(35964974-35965034)
chr2 (51-133)||(12341508-12341590)
[»] scaffold0519 (1 HSPs)
scaffold0519 (40-132)||(9997-10089)
[»] scaffold0014 (1 HSPs)
scaffold0014 (27-138)||(14433-14543)
[»] chr1 (27 HSPs)
chr1 (27-110)||(24710575-24710658)
chr1 (27-132)||(20774327-20774432)
chr1 (27-132)||(29936112-29936217)
chr1 (51-132)||(40087770-40087851)
chr1 (62-132)||(16903199-16903269)
chr1 (62-112)||(17092283-17092333)
chr1 (62-132)||(19572818-19572888)
chr1 (62-132)||(34610769-34610839)
chr1 (51-132)||(32594591-32594672)
chr1 (62-132)||(13390150-13390220)
chr1 (75-133)||(48126047-48126105)
chr1 (33-110)||(8880107-8880184)
chr1 (27-132)||(25180837-25180942)
chr1 (51-132)||(28297628-28297709)
chr1 (72-132)||(3628308-3628368)
chr1 (62-109)||(50426978-50427024)
chr1 (62-132)||(24237084-24237154)
chr1 (62-132)||(36187545-36187615)
chr1 (51-132)||(49742233-49742314)
chr1 (62-138)||(9983209-9983285)
chr1 (62-110)||(10778938-10778986)
chr1 (62-130)||(14890806-14890874)
chr1 (82-138)||(19892640-19892696)
chr1 (62-110)||(23493648-23493696)
chr1 (28-108)||(23966577-23966657)
chr1 (45-109)||(34060326-34060390)
chr1 (62-110)||(38686370-38686418)
[»] scaffold0095 (1 HSPs)
scaffold0095 (62-132)||(32847-32917)
[»] scaffold1630 (1 HSPs)
scaffold1630 (68-133)||(1317-1382)
[»] scaffold0036 (1 HSPs)
scaffold0036 (27-132)||(33090-33195)
[»] scaffold0189 (1 HSPs)
scaffold0189 (27-131)||(3954-4058)
[»] scaffold0244 (1 HSPs)
scaffold0244 (34-132)||(4939-5036)
[»] scaffold0097 (1 HSPs)
scaffold0097 (62-110)||(33300-33348)


Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 147 - 415
Target Start/End: Complemental strand, 37926150 - 37925884
Alignment:
Q  147 cccattgtcatgcctagaaaagatacacactaaagcgttttatgtggtgttttctttgtttttctagtcttttatcgctccataggtgttcatccttttg 246  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37926150 cccattgtcatgcatagaaaagatacacactaaagtgttttatgtggtgttttctttgtttttctagttttttatcgctccataggtgttcatccttttg 37926051  T
Q  247 taacgttccataggtgtttatctttttgtaggcgtgaatgtagtcacttttttaggttctannnnnnnnnnnnnatctcaacaggatcacgcgtttttct 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             | ||||||||||||||||||||||||    
T  37926050 taacgttccataggtgtttatctttttgtaggcgtgaatgtagtcacttttttaggttcta-ttttttctttttacctcaacaggatcacgcgtttttct 37925952  T
Q  347 tcatttgagagtttctcattttgttacctttctggaataggcgaacctcttcggtatttttgtttggac 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37925951 tcatttgagagtttctcattttgttacctttctggaataggcgaacctctttggta-ttttgtttggac 37925884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 37926306 - 37926200
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| || | ||||| ||     
T  37926306 aaaaattatccactgcgaggatgaggatgggtcggggatacccgaacccgtcggaaacgaggatgatattcgatttctcatccctactggatatgggtaa 37926207  T
Q  127 ggtaaca 133  Q
    |||||||    
T  37926206 ggtaaca 37926200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 6382563 - 6382668
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || |||||||||||||||| || ||||||||||| |||| |||||||||||| | | | ||||| |||    
T  6382563 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgttggggacggggatgagattcaatttctcatccccgttggatatgggtag 6382662  T
Q  127 ggtaac 132  Q
    ||||||    
T  6382663 ggtaac 6382668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 36306515 - 36306446
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    |||| ||||||||||||| || | |||||||||||||||||||||  |||||| ||||||||||||||||    
T  36306515 tgcggggatgaggatggggcgggtatacccgaacccgtcggagaccaggatgagattcgatttctcatcc 36306446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 15987553 - 15987629
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | | ||||| |||||||||| ||||    
T  15987553 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaa 15987629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 31918875 - 31918954
Alignment:
Q  53 atgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| || |||||||||||||| |||| ||||||||||  |||| |||||||||||| | | |||||||||||||||||    
T  31918875 atggggcggggatacccgaacccatcggggacggggatgggattcaatttctcatccccgttgggtatggatagggtaac 31918954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 55826912 - 55826995
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| | ||||||  || ||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  55826912 aaaaattattcaatgcggggacggggatggagcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccc 55826995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 4766638 - 4766715
Alignment:
Q  61 aggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||   ||||||||||| |||| |||||||||| | | | |||||||||||||||||| ||||    
T  4766638 aggatacccgaacccgtcaaggacggggatgagattcaatttctcatctccgttgggtatggatagggtaacaggtaa 4766715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 11027878 - 11027773
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||| | || ||||||||||||| ||||| ||||||||||| |||| |||||||||||| |   ||||||| |||    
T  11027878 aaaaattattcaatgcggggacggggatgaggcggggatacccgaacctgtcggggacggggatgagattcaatttctcatccccgtagggtatgggtag 11027779  T
Q  127 ggtaac 132  Q
    ||||||    
T  11027778 ggtaac 11027773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 19549252 - 19549353
Alignment:
Q  30 aattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggt 129  Q
    ||||||||| |||| |||| |||||||  || || |||||||| ||||||| ||||||||||| |||||||||||| | || | | ||||||| ||||||    
T  19549252 aattatccattgcggggataaggatggagcggggctacccgaatccgtcggggacggggatgagattcgatttctctttcccgttgggtatgggtagggt 19549351  T
Q  130 aa 131  Q
    ||    
T  19549352 aa 19549353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 8844169 - 8844237
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||| | ||||||||||| ||| ||||||||||||| ||| | || ||||||||||||    
T  8844169 atacccgaacccgtcagggacggggatgagatttgatttctcatccccgctggctacggatagggtaac 8844237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 8857133 - 8857201
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||| | ||||||||||| ||| ||||||||||||| ||| | || ||||||||||||    
T  8857133 atacccgaacccgtcagggacggggatgagatttgatttctcatccccgctggctacggatagggtaac 8857201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 10287033 - 10286969
Alignment:
Q  68 ccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||| ||||||||||| |||  |||||||||||| | | |||||||||||||||||    
T  10287033 ccgaacccgtcggggacggggatgagattatatttctcatccccgttgggtatggatagggtaac 10286969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 37348894 - 37348818
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| |||| ||||||  ||| |||||||||||| | | ||||||| |||||||||| ||||    
T  37348894 ggatacccgaacccgtcggggacgaggatgaagttcaatttctcatccccgttgggtatgggtagggtaacaggtaa 37348818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 40420925 - 40421033
Alignment:
Q  31 attatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggta 130  Q
    |||||||||| || ||||| | ||| | ||||||||| |||||||||| | ||| |||||||  ||||||||||||||||||||  | |||| | |||||    
T  40420925 attatccactacggggatgcgtatgaggcgaggatactcgaacccgtcagggacagggatgagtttcgatttctcatccctgctgagaatgggtggggta 40421024  T
Q  131 acatgtaat 139  Q
    ||| |||||    
T  40421025 acaggtaat 40421033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 53910165 - 53910233
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| ||| ||||| ||||||||||| ||||||||||||||||| |||  |||||| |||||||||    
T  53910165 atacccgtaccagtcggggacggggatgagattcgatttctcatccccgctgagtatgggtagggtaac 53910233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 7608776 - 7608665
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||  || |||||||||||||| |||| ||||||||||  |||| |||||||||||| | | | ||||| |||    
T  7608776 aaaaattattcaatgcggggacggggatggtgcggggatacccgaacccctcggggacggggatgggattcaatttctcatccccgttggatatgggtag 7608677  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  7608676 ggtaacaggtaa 7608665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 25265514 - 25265601
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| ||||||| || ||||||||||||||| |||  |||||||||  |||| |||||||||||| ||| ||||||| | |||||||    
T  25265514 ggatggggatggggcggggatacccgaacccgccgggtacggggatgggattccatttctcatccccgctgggtatgggttgggtaac 25265601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 36918871 - 36918760
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||| |||||| |||| |||||  |||||| |||| ||||||||||||| ||| |||  |||||  |||| |||||||||||| ||| | |||||| ||    
T  36918871 aaaaaatatccattgcggggatggagatggggcgagaatacccgaacccggcggggacaaggatggaattcaatttctcatccccgctggatatggacag 36918772  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  36918771 ggtaacaggtaa 36918760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 7985425 - 7985475
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggat 90  Q
    |||||||| ||||||||| || ||||||||||||||||||| |||||||||    
T  7985425 tgcgaggacgaggatggggcggggatacccgaacccgtcggggacggggat 7985475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 11123178 - 11123267
Alignment:
Q  49 gaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||| || ||||||||||||||||||| ||||||||||  |||| |||| ||||| | | | | ||||| |||||||||| ||||    
T  11123178 gaggatggggcggggatacccgaacccgtcggggacggggatgtgattcaatttatcatctccgttggatatgggtagggtaacaggtaa 11123267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 30034407 - 30034338
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    |||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | | ||||||| ||||    
T  30034407 ggatacccaaacccgtcggtgatggggatgagattcgatttctcatctctgctggatttggatagtgtaa 30034338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 44887670 - 44887601
Alignment:
Q  69 cgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||||||| ||||||||||| |||| ||||||||||||   | | |||||||||||||||| ||||    
T  44887670 cgaacccgtcggggacggggatgagattcaatttctcatccccattggatatggatagggtaacaggtaa 44887601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 47550666 - 47550747
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||| ||||||| |||  | |||| |||| |||||||||||| | | |||||||||||||||||    
T  47550666 ggatggggcggggatacccgaatccgtcggggacaagaatgagattcaatttctcatccccgttgggtatggatagggtaac 47550747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 13015724 - 13015800
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||||||||||| || ||||||||||| |||| |||||||||||  | ||| ||||| || ||||| ||||||    
T  13015724 ggatacccgaacccgttggggacggggatgaaattcaatttctcatcctcgttagatatgggtaaggtaatatgtaa 13015800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 42907579 - 42907531
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||| | || |||||||| |||||||||||||||||    
T  42907579 ggatacccgaacccgtctgggatggggatgagattcgatttctcatccc 42907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 44317315 - 44317239
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| || |||||||  |||| |||||||||||| | |  |||||| |||||||||| ||||    
T  44317315 ggatacccgaacccgtcggggatggggatgggattcaatttctcatccccgttgagtatgggtagggtaacaggtaa 44317239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 47239711 - 47239779
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||| || ||||||| ||||||||||| |||| |||||||||||| | | | |||||||||||||||    
T  47239711 atacccaaatccgtcggggacggggatgagattcaatttctcatccccgtttgatatggatagggtaac 47239779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 4741569 - 4741647
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggta 130  Q
    ||||||| |||||||||| ||||| ||||| || ||| |||| ||||||||||||||||||| ||  ||||| |||||||    
T  4741569 ggatggggcgaggatacctgaaccagtcggggatggg-atgagattcgatttctcatccctgttaaatatgggtagggta 4741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 12076002 - 12076088
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||| || |||||||||||| |||||| || | |||||| |||| |||||||||||| | | ||||| |||||||||| ||||||    
T  12076002 ggatggggcggggatacccgaactcgtcgg-gatgaggatgagattcaatttctcatccccgttgggtatagatagggtaatatgtaa 12076088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 26564637 - 26564526
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || | || |||||||||||||  |  ||||||||||||||| || ||||| ||||| |||| |||||||||||  | | | ||||| |||    
T  26564637 aaaaattattcaatacggggatgaggatggggtggagatacccgaacccgttggggacggagatgagattcaatttctcatcctcgttggatatgggtag 26564538  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  26564537 ggtaacaggtaa 26564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 43892277 - 43892234
Alignment:
Q  67 cccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||    
T  43892277 cccgaacccgtcggggacggggatgagattcaatttctcatccc 43892234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 1724634 - 1724704
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||| | |||||||||||  ||| |||||||||||| | | ||||||| |||||||||    
T  1724634 ggatacccaaacccgtcagggacggggatgaggttcaatttctcatccccgttgggtatgggtagggtaac 1724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 5902903 - 5902985
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||||||| || |||| ||| |  |||||| || ||||||||||||||||| | ||||||||||  |||| |||||||||||    
T  5902903 aaaaattattcaatgcggggacggagatggggcggggatacccgaacccgtcagggacggggatgggattcaatttctcatcc 5902985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 6482349 - 6482419
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||| ||||||||||||| ||||  ||| |||||||||||| | | | ||||| |||||||||    
T  6482349 ggatacccgaactcgtcggagacgggcatgaggttcaatttctcatccccgttggatatgggtagggtaac 6482419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 25299212 - 25299282
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||| || ||||| |||||||||  ||||||||||||||| | ||||| ||||  |||||||||    
T  25299212 ggatacccgaatccatcggaaacggggatgggattcgatttctcatctccgctagatatgagtagggtaac 25299282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 29527579 - 29527509
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||| ||| ||||||||  |||| ||| | |||||||| |||||||||||||| |||| ||||||||||||    
T  29527579 tgcggggacgaggatggagcgagaatatctgaacccgttggagacggggatgagattcaatttctcatccc 29527509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 43553188 - 43553106
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    |||| |||| ||||| ||||||| ||||| | || |||||| ||||||  |||| ||||||||||| ||||||||| ||||||    
T  43553188 aaaagttatgcactgtgaggatggggatgagacgcggatactcgaacctatcggggacggggatgagattcgatttttcatcc 43553106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 3505006 - 3504965
Alignment:
Q  34 atccactgcgaggatgaggatgggtcgaggatacccgaaccc 75  Q
    |||||||| ||||||||||||||  |||||||||||||||||    
T  3505006 atccactgtgaggatgaggatggtgcgaggatacccgaaccc 3504965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 53906589 - 53906670
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||| ||||| |||| ||||||| ||  |||| |||||||||||| | | ||||||| |||||||||    
T  53906589 ggatggggcgcggatacccaaacccatcggggacgggggtgggattcaatttctcatccccgttgggtatgggtagggtaac 53906670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 42774531 - 42774484
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||||| ||||||||||| |||  ||||||||||||    
T  42774531 ggatacccgaacccgtcgg-gacggggatgagattgaatttctcatccc 42774484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 43351761 - 43351801
Alignment:
Q  68 ccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    ||||||| |||| |||||||||||| |||||||||||||||    
T  43351761 ccgaacctgtcgaagacggggatgaaattcgatttctcatc 43351801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 48459257 - 48459209
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||||||||| | || ||||||||||| |||| ||||||||||||    
T  48459257 ggatacccgaacccattggggacggggatgagattcaatttctcatccc 48459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 23533952 - 23534057
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||| |||| |||||| ||||||||||| | |  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||| |||    
T  23533952 aaaaaatatctactgcgcggatgaggatgaggcagggatacccgaacccgtcggagacggggatgagattcgatttctcatccccgctggatatgggtag 23534051  T
Q  127 ggtaac 132  Q
    ||||||    
T  23534052 ggtaac 23534057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 35074273 - 35074168
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| ||||||||| || ||||||||||||||||||| ||||||||||  ||||||||||||||||| | | ||||||| |||    
T  35074273 aaaaattattcaatgcggggacgaggatggggcggggatacccgaacccgtcggggacggggatgggattcgatttctcatccccgttgggtatgggtag 35074174  T
Q  127 ggtaac 132  Q
    ||||||    
T  35074173 ggtaac 35074168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 23475611 - 23475714
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||| ||| ||||||| ||||||||||| | || ||||||||||||||||| ||||||||||||| |||||||||||||| || ||| | ||||| |||    
T  23475611 aaaaaatattcactgcggggatgaggatgaggcggggatacccgaacccgtcagagacggggatgagattcgatttctcatacccgctggatatgggtag 23475710  T
Q  127 ggta 130  Q
    ||||    
T  23475711 ggta 23475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 18125516 - 18125621
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||| | ||| |||||||||    
T  18125516 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttagatatggatag 18125615  T
Q  127 ggtaac 132  Q
    | ||||    
T  18125616 gataac 18125621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 44794338 - 44794425
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||| || ||| ||| |||||| |||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  44794338 ggatggggcggggacacctgaacccttcggagacggggatgagattcgatttctcatccctgttagatatgggtagggtaacaggtaa 44794425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 10072258 - 10072182
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| |||| |||||| |||| |||||||||||||| | ||||||| |||||||||| ||||    
T  10072258 ggatacccgaacccgtcggggacgaggatgagattcaatttctcatccctgttgggtatgggtagggtaacaggtaa 10072182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 45709176 - 45709251
Alignment:
Q  63 gatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||||||||||||  ||||||||||  |||| |||||||||||| | | |||||||||||||||||||||||    
T  45709176 gatacccgaacccgtcgaggacggggatgggattcaatttctcatcccagttgggtatggatagggtaacatgtaa 45709251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 45886053 - 45886164
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| |  |||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | | ||||| |||    
T  45886053 aaaaattattcaatgcggggacggtgatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtag 45886152  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  45886153 ggtaacaggtaa 45886164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 16865974 - 16865869
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | |||||||  | ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  16865974 aaaaattattcaatgcggggacggggatggggtggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtag 16865875  T
Q  127 ggtaac 132  Q
    ||||||    
T  16865874 ggtaac 16865869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 25905433 - 25905328
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||| ||| || |||||||| | |||||||  | ||||||||||| ||||||| ||||||||||| |||| ||||||||||| || | ||||||| |||    
T  25905433 aaaaaatattcaatgcgaggacggggatggggaggggatacccgaatccgtcggggacggggatgagattcaatttctcatccttgttgggtatgggtag 25905334  T
Q  127 ggtaac 132  Q
    ||||||    
T  25905333 ggtaac 25905328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 29292432 - 29292327
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    |||||||||||||| |  ||||| |||||||||| |||||||||| ||||| || |||| |||||| |||||||||| |||| | | | ||||||| |||    
T  29292432 aaaaattatccactacagggatggggatgggtcggggatacccgatcccgttggggacgaggatgagattcgatttcacatctccgttgggtatgggtag 29292333  T
Q  127 ggtaac 132  Q
    ||||||    
T  29292332 ggtaac 29292327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 30650435 - 30650330
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| |  |||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | | ||||| |||    
T  30650435 aaaaattattcaatgcggggacggtgatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtag 30650336  T
Q  127 ggtaac 132  Q
    ||||||    
T  30650335 ggtaac 30650330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 12980178 - 12980096
Alignment:
Q  28 aaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||| || |||| |||||||||| || || ||||||||||||||||||| ||| |||||||  ||| ||||||||||||    
T  12980178 aaaattattcaatgcggggatgaggattgggcggggatacccgaacccgtcggtgacagggatgaggttcaatttctcatccc 12980096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 17885216 - 17885146
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  17885216 ggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 17885146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 38140113 - 38140183
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | | ||||| |||||||||    
T  38140113 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggttatgggtagggtaac 38140183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 2632281 - 2632361
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||| |||||||||||||||||  ||| |||||||||||| | | ||||||| |||||||||    
T  2632281 ggatggggcggggatacccgaacctgtcggagacggggatgaggttcaatttctcatccccgttgggtatgg-tagggtaac 2632361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 39456302 - 39456378
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||| |||||||||| ||||||||||| |||| |||||||||||| | | |||| || |||||||||| ||||    
T  39456302 ggatacccaaacccgtcggggacggggatgaaattcaatttctcatccccgttgggtaggggtagggtaacaggtaa 39456378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 21702484 - 21702401
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| |||||||||   |||| ||||||||||||    
T  21702484 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggataggattcaatttctcatccc 21702401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 23328380 - 23328333
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||    
T  23328380 ggatacccgaacccgtcggagacggggatgagatttaatttctcatcc 23328333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 17851635 - 17851565
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||  ||| ||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  17851635 ggatacccgaacccgtcgaggacagggatgagattcaatttctcatccccgttgggtatgggtagggtaac 17851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 18826193 - 18826263
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||||| ||||||||||   ||| |||||||||||| | ||||||||| |||||||||    
T  18826193 ggatacccaaacccgtcggggacggggatggggttcaatttctcatccccgttaggtatgggtagggtaac 18826263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 37196311 - 37196381
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||  ||||| ||||| |||| |||||||||||| | | ||||||| |||||||||    
T  37196311 ggatacccgaacccgtcgaggacggagatgagattcaatttctcatccccgttgggtatgggtagggtaac 37196381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 17885019 - 17884954
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||| |  | |||||||| |||||||||| ||||||||||| |||| ||||||||||||    
T  17885019 ggatgaggatgaggtggggatacccaaacccgtcggggacggggatgagattcaatttctcatccc 17884954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 43550779 - 43550872
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    |||| ||||| ||||| | || |||||||||||||||||||||||  |||| | ||||||||||||| ||| ||| | ||||| ||| ||||||    
T  43550779 tgcggggatggggatgtgacggggatacccgaacccgtcggagacatggataaaattcgatttctcaaccccgctggatatgggtagagtaaca 43550872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 11473065 - 11473165
Alignment:
Q  32 ttatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    ||||||||||||  |||||||||| | |  |||||||| |||||||||||||| |||||||  ||| |||||||||  | ||| ||||||  ||||||||    
T  11473065 ttatccactgcggagatgaggatgaggcagggataccccaacccgtcggagacagggatgagtttctatttctcatatccgctcggtatgagtagggtaa 11473164  T
Q  132 c 132  Q
    |    
T  11473165 c 11473165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 25980230 - 25980317
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| ||||||| || |||||||||||||||| |  ||||| ||||| |||| |||||| ||||| | | ||||||| |||||||||    
T  25980230 ggatggggatggggcggggatacccgaacccgttgaggacggagatgagattcaatttcttatccccgttgggtatgggtagggtaac 25980317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 33840839 - 33840768
Alignment:
Q  67 cccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||| |||||||| ||||||||||  |||||||||||||||| | |  |||||| |||||||||| ||||    
T  33840839 cccgaatccgtcggaaacggggatgaggttcgatttctcatccccgttgagtatgggtagggtaacaggtaa 33840768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 44734662 - 44734729
Alignment:
Q  42 cgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    |||||||| ||||||  || ||||||| ||||||||||||||||| ||||  |||| |||||||||||    
T  44734662 cgaggatggggatggagcggggatacctgaacccgtcggagacggagatgggattcaatttctcatcc 44734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 7779779 - 7779706
Alignment:
Q  62 ggatacccgaacccgtcggagac--ggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    ||||||||||||||||||| |||  |||||||| |||| |||||||||||| | | | ||||| ||||||||||    
T  7779779 ggatacccgaacccgtcggggacggggggatgagattcaatttctcatccccgttggatatgggtagggtaaca 7779706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 8906934 - 8907004
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||| |||||||||||||| ||||| |||||  |||||||||||||||| |  |||||| | |||||||||    
T  8906934 ggatccccgaacccgtcggggacggagatgaggttcgatttctcatccccgtaaggtataggtagggtaac 8907004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 3156812 - 3156747
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||| ||||| | || |||||||| ||||||||||||| |||||||| | ||||||||| |||||    
T  3156812 ggatggggatgaggcggggatacccaaacccgtcggagatggggatgagaatcgatttcttatccc 3156747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 26072618 - 26072573
Alignment:
Q  65 tacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||| | |||||||||||||| |||| ||||||||||||    
T  26072618 tacccgaacccattggagacggggatgagattcaatttctcatccc 26072573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 26096405 - 26096360
Alignment:
Q  65 tacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||| | |||||||||||||| |||| ||||||||||||    
T  26096405 tacccgaacccattggagacggggatgagattcaatttctcatccc 26096360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 26622735 - 26622674
Alignment:
Q  49 gaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || ||||||||||||||||||| |||| |||||   ||| ||||||||||||    
T  26622735 gaggatggggcggggatacccgaacccgtcggggacgtggatggggttcaatttctcatccc 26622674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 31393753 - 31393798
Alignment:
Q  63 gatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||    
T  31393753 gatatccgaatccgtcggagacggggatgagattcaatttctcatc 31393798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 37579068 - 37578963
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| |  ||||||||||||||||||| || |||||||   ||| |||||||||||| | | ||||||  |||    
T  37579068 aaaaattattcaatgcggggacggggatggggcagggatacccgaacccgtcggggatggggatgtggttcaatttctcatccccgttgggtatgagtag 37578969  T
Q  127 ggtaac 132  Q
    ||||||    
T  37578968 ggtaac 37578963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 38152681 - 38152600
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||| ||||| |||| ||||||||||  |||| |||||||||||| | |  |||||| |||||||||    
T  38152681 ggatggggcggggatacccaaacccatcggggacggggatgggattcaatttctcatccccgttgagtatgggtagggtaac 38152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 41741737 - 41741822
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctg 112  Q
    ||||||||| |  |||| ||||| ||||| | || ||||||||||| ||||||| ||||  ||||| |||| ||||||||||||||    
T  41741737 aaaaattattcgatgcggggatggggatgaggcggggatacccgaatccgtcggggacgatgatgagattcaatttctcatccctg 41741822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 10996178 - 10996218
Alignment:
Q  70 gaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  10996178 gaacccgtcggggacagggatgatgttcgatttctcatccc 10996218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 27850612 - 27850712
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| ||  ||||||| ||||||| || ||||||||||   ||| |||||||||||| | | |||||||||||    
T  27850612 aaaaattattcaatgcggggacggggatggggcggagatacccaaacccgttggggacggggatggggttcaatttctcatccccgttgggtatggatag 27850711  T
Q  127 g 127  Q
    |    
T  27850712 g 27850712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 29855733 - 29855837
Alignment:
Q  29 aaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggataggg 128  Q
    |||||||||| |||| ||||| || || | || ||||||| ||||||||| | || | |||||| |||||| |||| ||||  | | |||||||||||||    
T  29855733 aaattatccattgcggggatgggggtgaggcggggatacctgaacccgtcagggatgaggatgaaattcgacttctgatcctcgttgggtatggataggg 29855832  T
Q  129 taaca 133  Q
    |||||    
T  29855833 taaca 29855837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 37217697 - 37217653
Alignment:
Q  94 attcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||| ||||||||||||||||||||| ||||| ||||||| ||||    
T  37217697 attctatttctcatccctgctaggtacggataaggtaacaggtaa 37217653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 43507202 - 43507154
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||| ||||| ||||||||||| |||| |||| |||||||    
T  43507202 ggatacccgaacctgtcggggacggggatgagattcaatttgtcatccc 43507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 2367126 - 2367015
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | ||||||  |||    
T  2367126 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgagtag 2367027  T
Q  127 ggtaacatgtaa 138  Q
    ||||||||||||    
T  2367026 ggtaacatgtaa 2367015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 29340572 - 29340461
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    |||||||||||| ||||  |||  ||||||| || ||| ||||||||||||||| || |||||||| ||||||||||||||||  ||||||||||  |||    
T  29340572 aaaaattatccattgcggtgatagggatggggcggggagacccgaacccgtcggggaaggggatgagattcgatttctcatccacgctaggtatgagtag 29340473  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  29340472 ggtaacaagtaa 29340461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 29342347 - 29342458
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    |||||||||||| ||||  |||  ||||||| || ||| ||||||||||||||| || |||||||| ||||||||||||||||  ||||||||||  |||    
T  29342347 aaaaattatccattgcggtgatagggatggggcggggagacccgaacccgtcggggaaggggatgagattcgatttctcatccacgctaggtatgagtag 29342446  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  29342447 ggtaacaagtaa 29342458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 32853644 - 32853539
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| || |||||||| |||| |||||||||||| | | ||||||| |||    
T  32853644 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtag 32853545  T
Q  127 ggtaac 132  Q
    ||||||    
T  32853544 ggtaac 32853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 5863695 - 5863765
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  5863695 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 5863765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 3484235 - 3484316
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||||||||    
T  3484235 ggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaac 3484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 14254725 - 14254649
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||| || | | ||||  |||||||||||||||    
T  14254725 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccatgttcgatatgagtagggtaacatgtaa 14254649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 32959635 - 32959567
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggta 130  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||| ||| ||||| | |||||||    
T  32959635 ggatacccgaacccgttggggacggggatgagattcgatttctcatccccgctgggtataggtagggta 32959567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 3245145 - 3245040
Alignment:
Q  31 attatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggta 130  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||| ||  || |||||||| |||||||||| |||| | | | | |||||||||| ||    
T  3245145 attatccactgcggggatgag-atgggtcgaggatacccgaacccg-cgaggatggggatgagattcgatttcgcatctccgttggatatggataggata 3245048  T
Q  131 acatgtaa 138  Q
    ||| ||||    
T  3245047 acaagtaa 3245040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 7978684 - 7978767
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||||||| |||| |||||||||||||  |  |||||||||||| || || || ||||||| ||||||||||||||||||    
T  7978684 aaaaattatccattgcggggatgaggatggggtggagatacccgaacctgttggggatggggatggtattcgatttctcatccc 7978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 10188386 - 10188473
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||| || |||||||||||| |||||| ||||||||||  |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  10188386 ggatggggcggggatacccgaactcgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacaggtaa 10188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 27534460 - 27534390
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||||||||    
T  27534460 ggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttgggtatgggtagggtaac 27534390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 24225478 - 24225419
Alignment:
Q  49 gaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    ||||||||| || ||||||||||||||||||||||||| ||||  |||| ||||||||||    
T  24225478 gaggatggggcggggatacccgaacccgtcggagacggcgatgtgattcaatttctcatc 24225419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 32052821 - 32052751
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| |||||||| |||||||||||||| |||| |||||||||||| | | | ||||| |||||||||    
T  32052821 ggataccggaacccgttggagacggggatgagattcaatttctcatccccgttggatatgggtagggtaac 32052751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 10142829 - 10142910
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| |||| |||||  |||| |||||||||||| | |  |||||| |||||||||    
T  10142829 ggatggggcggggatacccgaacccgtcggggacgaggatgggattcaatttctcatccccgttgagtatgggtagggtaac 10142910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 253144 - 253192
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||||||||    
T  253144 ggatacccgaactcgtcggggacggggatgagattcaatttctcatccc 253192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 9402325 - 9402238
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||| |||||| || | ||||| ||||||  ||| ||||||||||| ||||||||||||||| | ||| | ||||| |||||||||    
T  9402325 ggatgaagatggggcgggtataccagaacccaacggggacggggatgagattcgatttctcatctccgctggatatgggtagggtaac 9402238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 30816033 - 30815946
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| |||||||  | ||||||||||||||||||  ||||||||||   ||| |||||||||||||| | | ||| |||||||||||    
T  30816033 ggatggggatggggtggggatacccgaacccgtcgaggacggggatggggttcaatttctcatccctgttggatatagatagggtaac 30815946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 10925795 - 10925897
Alignment:
Q  29 aaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggataggg 128  Q
    |||||||| |||||||||||| ||| ||  || |||||||||||||| || |  ||| |||||| |||||| |||||||||| | | | ||||| |||||    
T  10925795 aaattatctactgcgaggatggggaaggagcggggatacccgaacccatcaggcacgaggatgagattcgacttctcatccccgttggatatgggtaggg 10925894  T
Q  129 taa 131  Q
    |||    
T  10925895 taa 10925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 12141162 - 12141092
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||||| ||||| ||||| |||| |||||||||||| | | ||||||| ||| |||||    
T  12141162 ggatacccaaacccgtcggggacggcgatgagattcaatttctcatccccgttgggtatgggtagagtaac 12141092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 1948141 - 1948244
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    |||||||||||  |||| ||||| ||||||| ||| ||||||| |||| ||||| |||| |||||  |||||||||||| |||| ||| | ||||| |||    
T  1948141 aaaaattatccgttgcggggatg-ggatggg-cgatgataccccaacctgtcggggacgaggatgggattcgatttctcgtccccgctggatatgggtag 1948238  T
Q  127 ggtaac 132  Q
    ||||||    
T  1948239 ggtaac 1948244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 7394209 - 7394278
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    ||||||||||||||||| ||||| |||||||  ||| |||||||||||| | | ||||||| || |||||    
T  7394209 ggatacccgaacccgtcagagacagggatgaggttcaatttctcatccccgttgggtatgggtatggtaa 7394278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 14687198 - 14687128
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||| | ||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  14687198 ggatacccgaacccgtcagggacggggatgagattcgatttctcatccctgctgagtatggatagggtaac 14687128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 34301442 - 34301553
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  34301442 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtag 34301541  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  34301542 ggtaacaggtaa 34301553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 11255306 - 11255398
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||| ||||| |||||||  | ||||||||||||||||||| ||||||||||| |||| |||||||||||| | |  ||||||||||||||||    
T  11255306 tgcgtggatggggatgggatggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaac 11255398  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 8545701 - 8545812
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||| ||||||||||| ||||||||||||| || | |||| ||||||||||||||| | |||| | ||||||||| |||| || | |  ||||||||||    
T  8545701 aaaaactatccactgcggggatgaggatgggccgggaatactcgaacccgtcggagatgaggataaaattcgatttttcattcccgttgagtatggatag 8545800  T
Q  127 ggtaacatgtaa 138  Q
     |||||||||||    
T  8545801 agtaacatgtaa 8545812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 6388894 - 6388964
Alignment:
Q  68 ccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||| |||||||||| ||||    
T  6388894 ccgaacccgtcggggacggggatgagattcgatttctcatccccgctggatatgggtagggtaacaggtaa 6388964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 24927749 - 24927644
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| ||||||| | |  ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  24927749 aaaaattattcaatgcggggacgaggatgagacagggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtag 24927650  T
Q  127 ggtaac 132  Q
    ||||||    
T  24927649 ggtaac 24927644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 29109130 - 29109211
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||| ||||||||||||||||||||||| |||| ||||||||| ||   ||||||||| |||||||||    
T  29109130 ggatggggcggggataccagaacccgtcggagacggggatgagattcaatttctcatacccattaggtatgggtagggtaac 29109211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 28977402 - 28977513
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || |||||||||||||||| || |||| |||||  |||| |||||||||||| | | ||||||| |||    
T  28977402 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgttggggacgtggatgtgattcaatttctcatccccgttgggtatgggtag 28977501  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  28977502 ggtaacaggtaa 28977513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 40248665 - 40248712
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  40248665 ggatacccgaacccgtcggagacggggatgagattcaatttctcatcc 40248712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 39445885 - 39445955
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||    ||||||||| |||||||||    
T  39445885 ggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcattaggtatgggtagggtaac 39445955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 2076160 - 2076229
Alignment:
Q  63 gatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||| ||||||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  2076160 gataaccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 2076229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 17084460 - 17084569
Alignment:
Q  29 aaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggataggg 128  Q
    |||||||| | |||| ||||| | ||| | || |||||||| |||||||||  ||||||||||| |||||||||||||||||   | ||||||| | |||    
T  17084460 aaattatcgattgcggggatgggaatgagacggggatacccaaacccgtcgaggacggggatgaaattcgatttctcatccccaatgggtatgggttggg 17084559  T
Q  129 taacatgtaa 138  Q
    ||||||||||    
T  17084560 taacatgtaa 17084569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 33633288 - 33633381
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||| |||||||  | ||||||| ||||||||||| ||| ||||||  ||||||||||| ||||| | | ||||||| |||||||||||||||    
T  33633288 ggatggggatggggtggggatacctgaacccgtcggggacagggatgcaattcgatttcttatccccgttgggtatgggtagggtaacatgtaa 33633381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 17220478 - 17220412
Alignment:
Q  66 acccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||| |||| ||||||||||  |||| |||||||||||||| | | |||||||||||||||    
T  17220478 acccgaacccatcggggacggggatgggattcaatttctcatccctgttggatatggatagggtaac 17220412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 15068914 - 15069007
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||| ||||||| || | |||||||||||| | || |||||| |||| |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  15068914 ggatggggatggggcgggaatacccgaacccattggggacgggaatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaa 15069007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 24870311 - 24870416
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| ||||||| | ||  ||||||| ||||| |||  ||||||||||| |||| |||||||||||| | | ||||||| |||    
T  24870311 aaaaattattcaatgcggggacgaggatgaggcggtgatacccaaacccatcgaggacggggatgagattcaatttctcatccccgttgggtatgggtag 24870410  T
Q  127 ggtaac 132  Q
    ||||||    
T  24870411 ggtaac 24870416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 32302836 - 32302755
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||||||||||||||  |||||||||  |||| |||||||||||  | | ||||||| |||||||||    
T  32302836 ggatggggcggggatacccgaacccgtcgggaacggggatgggattcaatttctcatcctcgttgggtatgggtagggtaac 32302755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 34776262 - 34776179
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| | ||||| | || ||||| |||||||||| || ||||||||||| |||| ||||||||||||    
T  34776262 aaaaattattcaatgcggggacggggatgaggcggggatatccgaacccgttggggacggggatgagattcaatttctcatccc 34776179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 1063274 - 1063204
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||||| |||| || |||||||| |||| |||||||||||| | | ||||| | |||||||||    
T  1063274 ggatacccgaacccatcggggatggggatgagattcaatttctcatccccgttgggtataggtagggtaac 1063204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 5793306 - 5793249
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||||| ||||||||||||||||| || || |||| ||||| ||||||||||||||||    
T  5793306 ggatggggcgaggatacccgaacccatctga-acggagatgaaattcgatttctcatcc 5793249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 9476393 - 9476439
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| |||| || ||||||||||| |||||||||||||||||    
T  9476393 atacccgaatccgttggggacggggatgagattcgatttctcatccc 9476439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 4231031 - 4231112
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||| | || |||||||| |||| |||| | ||||| | | ||||||| |||||||||    
T  4231031 ggatggggcggggatacccgaacccgtctgggatggggatgagattcaatttattatccccgttgggtatgggtagggtaac 4231112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 20399401 - 20399332
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    ||||| ||||||||||||| ||||||||||   ||| |||||||||||||| | ||||||| || |||||    
T  20399401 ggataaccgaacccgtcggggacggggatggggttcaatttctcatccctgttgggtatgggtaaggtaa 20399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 90373 - 90292
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| ||||||||||| |||||||||| |||||||||||  ||| |||||||||||||| | |||||||||||||||||    
T  90373 ggatggggcgaggatacccaaacccgtcggggacggggatgaggttcaatttctcatccctgttgggtatggatagggtaac 90292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 8020355 - 8020274
Alignment:
Q  28 aaaattatccactgcgaggatgaggatgggtcgaggataccc-gaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    ||||||||||| || | |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  8020355 aaaattatccattgtggggatgaggatgggtcggggataccccgaacccgtcggagacggggatgagatttgatttctcatc 8020274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 15889976 - 15889900
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | ||||||||| |||||||||| ||||    
T  15889976 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttaggtatgggtagggtaacaggtaa 15889900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 22695190 - 22695295
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| | ||||||| || |||||||||||||||||||| |||||||||  |||| ||||||||||||   | ||||||| |||    
T  22695190 aaaaattattcaatgcgaggacggggatggggcggggatacccgaacccgtcggaaacggggatgggattcaatttctcatccccattgggtatgggtag 22695289  T
Q  127 ggtaac 132  Q
    ||||||    
T  22695290 ggtaac 22695295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 40517583 - 40517496
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||| || ||||||||||||||| ||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  40517583 ggatggggcggggatacccgaacccgccggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaa 40517496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 10126908 - 10126823
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctg 112  Q
    ||||| ||| || |||| ||| ||||||| | || |||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  10126908 aaaaaatattcaatgcggggacgaggatgaggcggggatacccaaacccgtcggagacggggatgagattcaatttctcatccctg 10126823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 17853604 - 17853679
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  17853604 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccc-gttgggtatgggtagggtaacaggtaa 17853679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 42987766 - 42987846
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcat 107  Q
    ||||| ||| || |||| ||| ||||||||| ||||||||||||||||||||||  |||||||||| |||| |||||||||    
T  42987766 aaaaaatattcaatgcggggacgaggatggggcgaggatacccgaacccgtcgggaacggggatgagattcaatttctcat 42987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 33862471 - 33862554
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| |||||||||||  ||| ||||||||||||    
T  33862471 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgaggttcaatttctcatccc 33862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 5909006 - 5909076
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | |||| || |||||||||    
T  5909006 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtacgggtagggtaac 5909076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 20973809 - 20973885
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||||||||||||||  |||||||||| |||| |||||||||||| | | | ||||| |||||||||| ||||    
T  20973809 ggatacccgaacccgtcgggtacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaa 20973885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 29664687 - 29664631
Alignment:
Q  52 gatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    |||| |||||||||||| |||||||||||||||| |||||  |||||||||||||||    
T  29664687 gatgagtcgaggatacctgaacccgtcggagacgaggatgtgattcgatttctcatc 29664631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 13402327 - 13402397
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||||| |||| ||||||||||| |||| |||||||||||| | | ||||| | |||||||||    
T  13402327 ggatacccgaacccatcggggacggggatgagattcaatttctcatccccgttgggtataggtagggtaac 13402397  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 12834889 - 12834970
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||||||||| |||| ||||| ||||| |||| |||||||||||  | | |||||||||||| ||||    
T  12834889 ggatggggcggggatacccgaacccatcggggacggagatgagattcaatttctcatccacgttgggtatggataggataac 12834970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27088640 - 27088745
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||||||||||||| || |||||||| || | ||||| |||||||||||  ||| ||||| |||||| | | | ||||| |||    
T  27088640 aaaaattattcaatgcggggatgaggatggggcggggatacccaaatcagtcggggacggggatgaggttcaatttcccatccccgttggatatgggtag 27088739  T
Q  127 ggtaac 132  Q
    ||||||    
T  27088740 ggtaac 27088745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 17152893 - 17152821
Alignment:
Q  59 cgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    ||||||||||||||| |||| | |||||| || | ||||||||||||||| || ||| || ||||||||||||    
T  17152893 cgaggatacccgaacacgtcagggacgggtattagattcgatttctcatctctactaagtgtggatagggtaa 17152821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 18452236 - 18452336
Alignment:
Q  28 aaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagg 127  Q
    |||||||| || |||||||||| | ||| | || |||| | ||||||| |||| || |||||||  ||||| ||||||||||||||| ||||||| ||||    
T  18452236 aaaattatacattgcgaggatgggaatgtggcggggatgcacgaacccatcggggaaggggatgggattcggtttctcatccctgctgggtatgggtagg 18452335  T
Q  128 g 128  Q
    |    
T  18452336 g 18452336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 28045417 - 28045341
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| |||| | |||| |||| |||||||||||| | |  |||||| |||||||||| ||||    
T  28045417 ggatacccgaacccgtcggggacgagaatgaaattcaatttctcatccccgttgagtatgggtagggtaacaggtaa 28045341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 30996362 - 30996314
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  30996362 ggatacccgaatccgtcggggacggggatgagattcaatttctcatccc 30996314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 40188043 - 40188110
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||| || |||||||| |||| || | ||||||||||| ||||||| |||||||||    
T  40188043 atacccgaacccgtcgg-gatggggatgagattctatctatcatccctgctgggtatgggtagggtaac 40188110  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 6093394 - 6093505
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||| | || ||||| ||||||||||||| |||||||||   |||| |||||||||||| | | | ||||| |||    
T  6093394 aaaaattattcaatgcggggacggggatgaggcggggatatccgaacccgtcggggacggggataggattcaatttctcatccccgttggatatgggtag 6093493  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  6093494 ggtaacaagtaa 6093505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 39422158 - 39422079
Alignment:
Q  29 aaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    |||||||||| |||| ||||| ||||||| || ||||||||||||| |||   || ||||||| ||||||| ||||||||    
T  39422158 aaattatccattgcggggatggggatggggcgcggatacccgaacctgtcaaggatggggatggtattcgacttctcatc 39422079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 4920597 - 4920527
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  ||||  ||||||||||  | | ||||||| |||||||||    
T  4920597 ggatacccgaacccgtcggggacggggatgggattcattttctcatcctcgttgggtatgggtagggtaac 4920527  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 23045309 - 23045407
Alignment:
Q  34 atccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| |||| ||||| ||||||| || | |||||||||||| | || ||||||||||  |||| |||||||||||| | | | ||||| |||||||||    
T  23045309 atccattgcggggatggggatggggcgggaatacccgaacccattggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaac 23045407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 27900787 - 27900833
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||| ||||||||||  || ||||||||||||||    
T  27900787 atacccgaacccgtcggggacggggatgggatacgatttctcatccc 27900833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 10833954 - 10833893
Alignment:
Q  46 gatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcat 107  Q
    |||| ||||||| |||| |||||||||||| | |||||||||||||| |||  |||||||||    
T  10833954 gatggggatggggcgagaatacccgaacccattggagacggggatgagatttaatttctcat 10833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 38006759 - 38006864
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || |||||||| ||||| |||| |||||| |||   ||| |||||||||||| | | ||||||| |||    
T  38006759 aaaaattattcaatgcggggacggggatggggcggggatacccaaacccatcggggacgggtatggggttcaatttctcatccccgttgggtatgggtag 38006858  T
Q  127 ggtaac 132  Q
    ||||||    
T  38006859 ggtaac 38006864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 36579595 - 36579651
Alignment:
Q  82 gacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||| ||||| |||| |||||||||||| | | ||||||| |||||||||||||||    
T  36579595 gacggagatgagattcaatttctcatccccgttgggtatgggtagggtaacatgtaa 36579651  T

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Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 7470066 - 7470171
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| | ||||||| || |||||||| |||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||    
T  7470066 aaaaattattcaatgcgaggacggggatggggcggggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtag 7470165  T
Q  127 ggtaac 132  Q
    ||||||    
T  7470166 ggtaac 7470171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 29284100 - 29284030
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | |||||||||||||||||    
T  29284100 ggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatggatagggtaac 29284030  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 23580609 - 23580544
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23580609 ggatggggatggggtggggatacccgaacccgtcggagacggggatgaaattcaatttctcatccc 23580544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 31127083 - 31127188
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| ||||||||| || ||||||||||||||||||| ||||||||||   ||| ||||||||| || | | | ||||| |||    
T  31127083 aaaaattattcaatgcgaggacgaggatggggcggggatacccgaacccgtcggggacggggatggggttcaatttctcattcccgttggatatgggtag 31127182  T
Q  127 ggtaac 132  Q
    ||||||    
T  31127183 ggtaac 31127188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 44107111 - 44107192
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || | ||||||||||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  44107111 ggatggggcgggaatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 44107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 44179127 - 44179022
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||| ||||| ||||||||||| |||| |||||||||||  | | ||||||| |||    
T  44179127 aaaaattattcaatgcggggacggggatggggcggggatacccgaacctgtcggggacggggatgagattcaatttctcatccacgttgggtatgggtag 44179028  T
Q  127 ggtaac 132  Q
    ||||||    
T  44179027 ggtaac 44179022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 44252517 - 44252436
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||||||||    
T  44252517 ggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaac 44252436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 34154198 - 34154111
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||| ||||| | || ||||||||||||||||||| ||||||||||| |||| |||||||||||| |   ||||||| |||||||||    
T  34154198 ggatggggatgaggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgtggggtatgggtagggtaac 34154111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 34025735 - 34025654
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| |||| |||||||||||| | | | |||| ||||||||||    
T  34025735 ggatggggcggggatacccgaacccgtcggggacggggctgagattcaatttctcatccccgttggatatgaatagggtaac 34025654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 49579840 - 49579759
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||||||||| |||| ||||||||||| |||| |||||||||||| | ||| ||||  |||||||||    
T  49579840 ggatggggcgtggatacccgaacccttcggggacggggatgaaattcaatttctcatccccgttagatatgagtagggtaac 49579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 39728447 - 39728371
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||| |||||||||| || |||||||| |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  39728447 ggatacccaaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaa 39728371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 22536167 - 22536238
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    ||||||||||||||||||  ||||||||||| |||| |||||||||||| | | ||||||  ||||||||||    
T  22536167 ggatacccgaacccgtcgaggacggggatgagattcaatttctcatccccgttgggtatgagtagggtaaca 22536238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 44639053 - 44638970
Alignment:
Q  49 gaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||| || ||||| | ||||||||||| ||||||||||| |||| ||||||||| || | | ||||||| |||||||||    
T  44639053 gaggatggggcggggatatctgaacccgtcggggacggggatgagattcaatttctcattcccgttgggtatgggtagggtaac 44638970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 44953723 - 44953806
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| ||||||||| || ||||||||||||| |||||  |||||||||  |||| ||||||||||||    
T  44953723 aaaaattattcaatgcggggacgaggatggggcggggatacccgaacctgtcgggaacggggatgtgattcaatttctcatccc 44953806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 29842071 - 29842025
Alignment:
Q  63 gatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  29842071 gatacccgaacccgtcggggacggggatgagattcaatttctcatcc 29842025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 4557629 - 4557698
Alignment:
Q  63 gatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| |||||||||| |||||||||||  ||| |||||||||||| |   |||||||||||||||||    
T  4557629 gatacccaaacccgtcggggacggggatgaggttcaatttctcatccccgtcgggtatggatagggtaac 4557698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 17146438 - 17146519
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    ||||||||| || |||| ||| | ||||||| || |||||||||||||| |||| ||||||||||| |||| |||| |||||    
T  17146438 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccatcggggacggggatgagattcaatttgtcatc 17146519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 39655586 - 39655655
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaa 131  Q
    ||||||||||||||||| | ||| ||||||  |||| |||||||||||||| | ||||||| ||||||||    
T  39655586 ggatacccgaacccgtcagggacagggatgggattcaatttctcatccctgttgggtatgggtagggtaa 39655655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 54316908 - 54316832
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||||||| ||||||   ||| ||||||||||||   | | ||||||||||||||| |||||    
T  54316908 ggatacccgaacccgtcggagacagggatggggttcaatttctcatccccattcgatatggatagggtaacgtgtaa 54316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 37032432 - 37032535
Alignment:
Q  6 aatacttttattttaaa-aaccaaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttct 104  Q
    |||||||||||||| || ||  |||||||||||||| || ||||| | ||| | || |||| ||| |||||||||| |||  |||||| |||||||||||    
T  37032432 aatacttttatttttaataaaaaaaaattatccacttcggggatgggaatgaggcggggatgcccaaacccgtcggggacatggatgagattcgatttct 37032531  T
Q  105 catc 108  Q
    ||||    
T  37032532 catc 37032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 43582377 - 43582296
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccct 111  Q
    ||||||||| |  |||| ||||| ||||| | || ||||||||||||||||||| ||||||||||| ||   |||||||||||||    
T  43582377 aaaaattattcgatgcggggatggggatgaggcggggatacccgaacccgtcggggacggggatgagat---atttctcatccct 43582296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 53631688 - 53631618
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||| ||||| ||||| | || |||||||||||||||| || |||||||||||  ||| ||||||||||||    
T  53631688 tgcggggatgtggatgaggcggggatacccgaacccgttggtgacggggatgaggttcaatttctcatccc 53631618  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 49025458 - 49025377
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||||||||||||||  |||| ||||  |||| |||||||||||| | | | ||||| |||||||||    
T  49025458 ggatggggcggggatacccgaacccgtcgggaacggtgatgtgattcaatttctcatccccgttggatatgggtagggtaac 49025377  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 52197928 - 52197871
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    ||||||| || ||||| ||||||||||||| ||||||||||| |||  ||||||||||    
T  52197928 ggatggggcggggataaccgaacccgtcggggacggggatgagatttaatttctcatc 52197871  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 23154330 - 23154378
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||||| |||| |||||| |||  ||||||||||||    
T  23154330 ggatacccgaacccgtcggggacgaggatgagatttaatttctcatccc 23154378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 52572373 - 52572309
Alignment:
Q  68 ccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||| ||||||||||  |||| |||||||||||| | | |||| || |||||||||    
T  52572373 ccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtacgggtagggtaac 52572309  T

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Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 10208718 - 10208823
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| ||||||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||| | | | ||||| |||    
T  10208718 aaaaattattcaatgcggggaagaggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtag 10208817  T
Q  127 ggtaac 132  Q
    ||||||    
T  10208818 ggtaac 10208823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 30846745 - 30846640
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| | ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  30846745 aaaaattattcaatgcgaggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtag 30846646  T
Q  127 ggtaac 132  Q
    ||||||    
T  30846645 ggtaac 30846640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 13830536 - 13830432
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||||| ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  13830536 aaaaattattcaatgcggggatggggatggggcggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttgggtatgggtag 13830437  T
Q  127 ggtaa 131  Q
    |||||    
T  13830436 ggtaa 13830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 24414420 - 24414525
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  24414420 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtag 24414519  T
Q  127 ggtaac 132  Q
    ||||||    
T  24414520 ggtaac 24414525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 37999261 - 37999202
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37999261 ggatggggcggggatacccgaacccgtcggagacggggatgagattcaatttctcatccc 37999202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 6028190 - 6028288
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    |||||||| ||||||||| || ||||||||||||||||||| ||||||||||   ||| |||||||||||||| | | ||| | |||||||||| ||||    
T  6028190 tgcgaggacgaggatggggcggggatacccgaacccgtcggggacggggatggggttcaatttctcatccctgttggatattggtagggtaacaggtaa 6028288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 37473053 - 37473129
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||||||||||| || |||||||| |||| |||||||||||| | | ||||||| |||||||||| ||||    
T  37473053 ggatacccgaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaa 37473129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 8916259 - 8916329
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||  | | ||||||| |||||||||    
T  8916259 ggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcgttgggtatgggtagggtaac 8916329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 9632163 - 9632093
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||||||| || ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  9632163 ggatacccgaacccgttggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 9632093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 29657107 - 29657189
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    ||||||| || | ||||||||||||||||| | ||||||||| |||| |||||||||||| | |||||||||  |||||||||    
T  29657107 ggatggggcgggtatacccgaacccgtcgggggcggggatgagattcaatttctcatccccgttaggtatgggcagggtaaca 29657189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 36128420 - 36128501
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||| ||||||||||| ||||||||||| |||| |||| ||||||| | | ||||||| |||||||||    
T  36128420 ggatggggcggggatacctgaacccgtcggggacggggatgagattcaatttttcatccccgttgggtatgggtagggtaac 36128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 25210086 - 25210018
Alignment:
Q  64 atacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||||| || |||||||||| |||||||| ||||||||| ||| ||||||| | |||||||    
T  25210086 atacccgaacccgttggtgacggggatgttattcgatatctcatccccgctgggtatgggttgggtaac 25210018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 45115381 - 45115298
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||||| ||||| | || ||||||||||||||||||| || |||||||| |||| ||||||| ||||    
T  45115381 aaaaattattcaatgcggggatggggatgaggcggggatacccgaacccgtcggggatggggatgagattcaatttctcgtccc 45115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 7314973 - 7315043
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||| ||| | |||||  ||||||||    
T  7314973 ggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgctggatatgggcagggtaac 7315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 16105389 - 16105323
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggataggg 128  Q
    |||||||||||||||||||  |||||||||| |||| |||||||||||  | | |||||||||||||    
T  16105389 ggatacccgaacccgtcgggaacggggatgagattcaatttctcatcctcgttgggtatggataggg 16105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 37106471 - 37106406
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagg 127  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||||||  | | ||||||||||||    
T  37106471 ggatacccgaacccgtcagggacggggatgagattcaatttctcatcctcgttgggtatggatagg 37106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 45256624 - 45256519
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | |||||||  | |||||||| ||||| |||| ||||||||||| |||| |||||||||||| | ||| ||| | |||    
T  45256624 aaaaattattcaatgcggggacggggatggggtggggatacccaaacccatcggggacggggatgagattcaatttctcatccccgttagatataggtag 45256525  T
Q  127 ggtaac 132  Q
    ||||||    
T  45256524 ggtaac 45256519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 18106402 - 18106478
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||| ||||||||||||||||||| |||  | |||||||||| | | | ||||| |||||||||| ||||    
T  18106402 ggatacccgaatccgtcggagacggggatgagatttaacttctcatccccgttggatatgggtagggtaacaggtaa 18106478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 35965034 - 35964974
Alignment:
Q  72 acccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||||||| |||| |||||||||||| |||  |||||| |||||||||    
T  35965034 acccgtcgcagacggggatgagattcaatttctcatccccgctgagtatgggtagggtaac 35964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 12341590 - 12341508
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    ||||||| || |||||||| |||||||||| ||||||||||| |||  ||||||||| || | | |||||||  |||||||||    
T  12341590 ggatggggcggggatacccaaacccgtcggggacggggatgagatttaatttctcattcccgttgggtatgggcagggtaaca 12341508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 10089 - 9997
Alignment:
Q  40 tgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||| ||||| |||||||  | ||||||||||||||||||| ||||||||||| |||| |||||||||||| | |  ||||||||||||||||    
T  10089 tgcgtggatggggatgggatggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaac 9997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 14433 - 14543
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| | ||||||| || ||||||||||||||||||| ||||| ||||   ||| |||||||||||||| | ||||||| |||    
T  14433 aaaaattattcaatgcgaggacggggatggggcggggatacccgaacccgtcgg-gacggagatggggttcaatttctcatccctgttgggtatgggtag 14531  T
Q  127 ggtaacatgtaa 138  Q
    ||||||| ||||    
T  14532 ggtaacaggtaa 14543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 24710658 - 24710575
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  24710658 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccc 24710575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 20774432 - 20774327
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | | ||||| |||    
T  20774432 aaaaattattcaatgcggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatatgggtag 20774333  T
Q  127 ggtaac 132  Q
    ||||||    
T  20774332 ggtaac 20774327  T

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Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 29936217 - 29936112
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||||||| | | ||||| || ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | | ||||| |||    
T  29936217 aaaaattattcaatgcgaggacgggaatggggcggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttggatatgggtag 29936118  T
Q  127 ggtaac 132  Q
    ||||||    
T  29936117 ggtaac 29936112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 40087770 - 40087851
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| ||||||||||| |||| ||||||||||||   | ||||||| |||||||||    
T  40087770 ggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccattgggtatgggtagggtaac 40087851  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 16903269 - 16903199
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| | | | ||||| |||||||||    
T  16903269 ggatacccgaacccgtcggggacggggatgggattcgatttctcatccccgatggatatgggtagggtaac 16903199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 17092283 - 17092333
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctg 112  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  17092283 ggatacccgaacccgtcggggacggggatgagattcaatttctcatccctg 17092333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 19572818 - 19572888
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||| |||||||||| ||||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  19572818 ggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 19572888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 34610839 - 34610769
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| |||| |||||| |||| |||||||||||| | | ||||||| |||||||||    
T  34610839 ggatacccgaacccgtcggggacgaggatgagattcaatttctcatccccgttgggtatgggtagggtaac 34610769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 32594672 - 32594591
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||||||||||| ||||  |||||||||| |||| |||||||||||| | | ||||||| |||||||||    
T  32594672 ggatggggcggggatacccgaacccatcgggtacggggatgagattcaatttctcatccccgttgggtatgggtagggtaac 32594591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 13390220 - 13390150
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||| | | | ||||| |||||||||    
T  13390220 ggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaac 13390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 48126047 - 48126105
Alignment:
Q  75 cgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    |||||||||||||||||| ||||||||| |||||| || ||||||||| |||| |||||    
T  48126047 cgtcggagacggggatgagattcgatttttcatccatgttaggtatgggtaggttaaca 48126105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 8880184 - 8880107
Alignment:
Q  33 tatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||||||| || |||||| |||||| || |||||||||||||| |  |  |||||||||| |||||||||||||||||    
T  8880184 tatccactacggggatgatgatggggcggggatacccgaacccattaggaacggggatgagattcgatttctcatccc 8880107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 25180942 - 25180837
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||||||||||||| ||| ||||||| ||  |||||||||| | || ||  |||| ||||  ||||||||||||||||  ||| ||||||| |||    
T  25180942 aaaaattatccactgcgagaatggggatggggcggtgatacccgaatctgttgggaacggagatgtgattcgatttctcatcctcgctgggtatgggtag 25180843  T
Q  127 ggtaac 132  Q
    | ||||    
T  25180842 gataac 25180837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 28297709 - 28297628
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || ||||||||||||||||||| ||||||||||  |||| ||||||||| || | | ||||||| | |||||||    
T  28297709 ggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcattcccgttgggtatgggtcgggtaac 28297628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 3628308 - 3628368
Alignment:
Q  72 acccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||| ||||||||||| |||| |||||| ||||| | | |||||||||||||||||    
T  3628308 acccgtcggggacggggatgagattcaatttcttatccccgttgggtatggatagggtaac 3628368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 50426978 - 50427024
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  50426978 ggatacccgaacccgtcgg-gacggggatgagattcaatttctcatcc 50427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 24237084 - 24237154
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||||||||||||  ||| |||||| |||| |||||||||||| | | ||||||| | |||||||    
T  24237084 ggatacccgaacccgtcgggcacgaggatgagattcaatttctcatccccgttgggtatgggtggggtaac 24237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 36187545 - 36187615
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||| || |||| ||||||||||  |||| |||||||||||| | | ||||||| |||||||||    
T  36187545 ggatacccgaatccatcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaac 36187615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 49742233 - 49742314
Alignment:
Q  51 ggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||| || |||||| | |||||||  | |||||||||||  ||| |||||||||||| | ||| |||||||||||||||    
T  49742233 ggatggggcggggatacacaaacccgttagggacggggatgaggttcaatttctcatccccgttagatatggatagggtaac 49742314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 9983209 - 9983285
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||| ||||||| |||||||||||  ||  |||| ||||||| ||| | ||||| |||||||||| ||||    
T  9983209 ggatacccgaatccgtcggggacggggatgaggttaaatttttcatccccgctggatatgggtagggtaacaggtaa 9983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 10778938 - 10778986
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    |||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  10778938 ggatccccgaacccgtcggagacgggtatggggttcgatttctcatccc 10778986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 14890874 - 14890806
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggta 130  Q
    |||||||||||||| |||| ||| ||||||| |||| ||||||||| || ||| ||||||  |||||||    
T  14890874 ggatacccgaacccatcggggacagggatgagattctatttctcattcccgctgggtatgtgtagggta 14890806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 19892696 - 19892640
Alignment:
Q  82 gacggggatgatattcgatttctcatccctgctaggtatggatagggtaacatgtaa 138  Q
    ||||||||||| |||| |||||||||||| | || |||||| |||||||||| ||||    
T  19892696 gacggggatgagattcaatttctcatccccgttatgtatgggtagggtaacaagtaa 19892640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 23493648 - 23493696
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||| | ||||||||||  |||| ||||||||||||    
T  23493648 ggatacccgaacccgtcagggacggggatgggattcaatttctcatccc 23493696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 23966657 - 23966577
Alignment:
Q  28 aaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatc 108  Q
    |||||||| || | || ||||| |||||||  | ||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  23966657 aaaattattcaatacggggatggggatggggtggggataccagaacccgtcggggacggggatgggattcaatttctcatc 23966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 34060326 - 34060390
Alignment:
Q  45 ggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatcc 109  Q
    ||||| |||||||  | |||||||||||||| || | ||||||||||| |||| |||||||||||    
T  34060326 ggatggggatggggtggggatacccgaacccatcagggacggggatgagattcaatttctcatcc 34060390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 38686418 - 38686370
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||| |||||    
T  38686418 ggatacctgaacccgtcggggacggggatgagattcaatttctgatccc 38686370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 32847 - 32917
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||    ||||||||| |||||||||    
T  32847 ggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcattaggtatgggtagggtaac 32917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 1382 - 1317
Alignment:
Q  68 ccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaaca 133  Q
    ||||||||||||| || || ||||| |||| |||||||||||| | ||||||||||||||||||||    
T  1382 ccgaacccgtcggggatggagatgagattcaatttctcatccccgttaggtatggatagggtaaca 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 33195 - 33090
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||||| ||||| |  | ||||||||||| ||||||| ||||||||||| |||| ||||||||| || | | ||||||| |||    
T  33195 aaaaattattcaatgcggggatggggatgtggtggggatacccgaatccgtcggggacggggatgagattcaatttctcattcccgttgggtatgggtag 33096  T
Q  127 ggtaac 132  Q
    ||||||    
T  33095 ggtaac 33090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 4058 - 3954
Alignment:
Q  27 aaaaattatccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatag 126  Q
    ||||||||| || |||| ||| | ||||||| || || ||||||||||| |||| ||||||||||  |||| |||||||||||| | | ||||||| |||    
T  4058 aaaaattattcaatgcggggacggggatggggcgggggtacccgaacccatcggggacggggatgtgattcaatttctcatccccgttgggtatgggtag 3959  T
Q  127 ggtaa 131  Q
    |||||    
T  3958 ggtaa 3954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 4939 - 5036
Alignment:
Q  34 atccactgcgaggatgaggatgggtcgaggatacccgaacccgtcggagacggggatgatattcgatttctcatccctgctaggtatggatagggtaac 132  Q
    |||||||||| ||||| ||||||| || ||||||||||| ||||||| ||| | |||||  |||||| ||||||||| | ||||||||  |||||||||    
T  4939 atccactgcggggatg-ggatgggacggggatacccgaatccgtcggggactgagatgaatttcgatctctcatccccgttaggtatgagtagggtaac 5036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 33348 - 33300
Alignment:
Q  62 ggatacccgaacccgtcggagacggggatgatattcgatttctcatccc 110  Q
    ||||||||||||||||||| ||||| |||||  ||| ||||||||||||    
T  33348 ggatacccgaacccgtcggggacggagatgaggttcaatttctcatccc 33300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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