View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2554_low_27 (Length: 228)
Name: NF2554_low_27
Description: NF2554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2554_low_27 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 45460902 - 45460675
Alignment:
| Q |
1 |
tcaacgaggccaaaacataacagaaagcatgcggatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgagactagttgtcacaagca |
100 |
Q |
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| T |
45460902 |
tcaacgaggccaaaacataacagaaagcatgcagatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgagactagttgtcacaagca |
45460803 |
T |
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| Q |
101 |
ttccacatattatagccaaacctgccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacaatcatgctaactgaatgg |
200 |
Q |
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| T |
45460802 |
ttccacatattatagccaaacctaccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacgatcatgctaactgaatgg |
45460703 |
T |
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| Q |
201 |
taaacaagttccatataaccatccttaa |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
45460702 |
taaacaagttccatataaccatccttaa |
45460675 |
T |
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