View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2555_low_19 (Length: 241)
Name: NF2555_low_19
Description: NF2555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2555_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 19896510 - 19896300
Alignment:
| Q |
16 |
aactttaaagtccaactcttattgatatagaaaaggcccaacttccatgattcaactattaaaaatttcctccttaaaaattaaacaggctattagaaat |
115 |
Q |
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| T |
19896510 |
aactttaaagtccatctcttattgatatagaaaaggcccaacttctatgattcaactattaaaaatttcctccttaaaaattaaacaggctattagaaat |
19896411 |
T |
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| Q |
116 |
atacaatacaaggatttaatacaatcttacattaaatatttattactctataacttgcattttgatcctccacaaacaatacttacacatgatgataacg |
215 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19896410 |
atacagtacaaggatttaatacaatcttacattaaatatttattactctataacttgcattttgatcctccacaaacaatacttacacatgatgataacg |
19896311 |
T |
|
| Q |
216 |
agcttatttat |
226 |
Q |
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||||||||||| |
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| T |
19896310 |
agcttatttat |
19896300 |
T |
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