View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2557_high_27 (Length: 344)
Name: NF2557_high_27
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2557_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 37123166 - 37123491
Alignment:
| Q |
1 |
tcatccagtctattatttagtattgccgaccttgtatacaacatcaaaatcatgcagtttagacgacaagttttctgattttgagtggttactctttgtt |
100 |
Q |
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| T |
37123166 |
tcatccagtctattatttagtattgccgaccttgtatacaatatcaaaatcacgcagtttagacgacaagttttctgattttgagtggttactctttgtt |
37123265 |
T |
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| Q |
101 |
caagcaatggctcaattgttgaatggctaacacaaaaaccatcaattccttctcataaacagatctggagaggtgttttggagaatttggtttgttgtga |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37123266 |
caagcaatggctcaattgttgaatggccaacacaaaaaccatcaattccttctcataaacagatctggagaggtgttttggagaatttggtttgttgtga |
37123365 |
T |
|
| Q |
201 |
aaaaacataaccaattccccttcacaatgcatcacattctattgagaaagggaaattcttcttcactgataaaacattccactgagaaaagaaaactaaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37123366 |
aaaaacataaccaattccccttcacaatgcatcacattctattgagaaa-ggaaattcttcttcactgataaaacattccactgagaaaagaaaactaaa |
37123464 |
T |
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| Q |
301 |
ttgggtaaagccaacattggaattgtt |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37123465 |
ttgggtaaagccaacattggaattgtt |
37123491 |
T |
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