View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2557_high_34 (Length: 322)
Name: NF2557_high_34
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2557_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 306
Target Start/End: Original strand, 29956390 - 29956685
Alignment:
| Q |
11 |
cagagagaatcgaatctgcgactgcaatttaaaaacattgctttccacgaatgaaaacgaagggaaaaaatgctcaccaattccttccaataacctcctt |
110 |
Q |
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| T |
29956390 |
cagagagaattgaatctgcgactgcaatttaaaaacattgctttctacgaatgaaaacgaagggaaaaaatgctcaccaattccttccaataacctcctt |
29956489 |
T |
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| Q |
111 |
agaagagtaaccagtcatactnnnnnnnccactgcttgcatacaagataggacaatcaggtttagttgcatctgagacaacaaatgtttgctgaagtgta |
210 |
Q |
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| T |
29956490 |
agaagagtaaccagtcatactaaaaaaaccactgcttgcatacaagataggacaatcaggtttagttgcatctgagacaacaaatgtttgttgaagtgta |
29956589 |
T |
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| Q |
211 |
gacaacgcgtccttcaattcttgtgaaactcttggaaacaaccccgacaatttagcctccgaaccataattcgattcccctgaagtccttgtcgaa |
306 |
Q |
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||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29956590 |
gacaacgcgtccttcaattcttgcgaaactcttggaaacagccccgacaatttagcctccgaaccataattcgattcccctgaagtccttgtcgaa |
29956685 |
T |
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